TCONS_00018999 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018999
Unique NameTCONS_00018999
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length723

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018999 ID=TCONS_00018999|Name=TCONS_00018999|organism=Clytia hemisphaerica|type=transcript|length=723bp
ATGTGAAGGACCCGACACAAGACACAAGATCAACTTCCAATATGGCGTCC
CCATCAGAGAGTGGCAACTGGGGCGAAGATGGAACTTTCTATGATAACTT
CGAAAGTGGAAGTGGAAGTGGAAGTGGAAGGTCAGATCgagattttgata
atttcgggGGTGGATACGGAGGTGGACGTAGAGGGCGTGGCGGAAGAGGC
GGCCGTGATCGAGGTGATCGAGGTGGCAGAGGCGGTGGTGGATACAACAA
CAGAGGCGGTGGTGGTGGAGGTTACTACCAAGGAGGTGGTGGTGACAGGG
ATGCGCCGATTCCAGAAGAACCACCTTTCACAGCGTATGTAGGAAACCTT
CCTTATCAATGTGTCCAAGGAGATGTGGACCAAATCTTTGCAGAGCTCAA
GGTGCGAAACATCAAACTAATACGTGATCGTGAAACTGACAAATTCAAAG
gaTTCGCATACGTAGAGTTTGACGACAAAGAATCGCTGATAAAAGCATTA
GAGTTCGACCAAGCACAATTTGGTGATCGAAACTTGAAAGTAAACGTTTC
CCGCAACAATAGACGCGGTGGCGGAAGGGGCGGCCGTGGCGGTGGCGACG
ATCGTGGTGGTCGTGGTGGACGAGGACGTGGCAGCGGCGGCGGATTCGGT
GGCGGATTCGGTGGCGGTGATCGATATAATAATGAGTTCCCCCGTGATGG
AGGCTTCGGTGGTGGTCGCCGNT
Run BLAST on NCBI

transcript from alignment at sc0000314:211381..224949-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018999 ID=TCONS_00018999|Name=TCONS_00018999|organism=Clytia hemisphaerica|type=transcript|length=13569bp|location=Sequence derived from alignment at sc0000314:211381..224949- (Clytia hemisphaerica)
ATGTGAAGGACCCGACACAAGACACAAGATCAACTTCCAATATGGCGTCC
CCATCAGAGAGTGGCAACTGGGGCGAAGATGGAACTTTCTATGATAACTT
CGAAAGTGGAAGTGGAAGTGGAAGTGGAAGGTATGAATTATAAAAATTTT
GACTTCAGAATTAGTAAAACTAATTCACTATGATTTATTATTATAGATAT
TAATGCTGGTGGAGGAATGGCTGTTCAATTCATGGGGAGATTTCATTATA
ATATGTGACTGTGTCTAAGCTCTTTTCAGTGTATCACCTAGCCTGGAGAT
CCTTGCTATGATTTCTTCTTTTATGTCGCTTTTTATAAGTTTCCCAATTC
AGCACTAATATTCCTTTGCCGTTTTTCTAGCGGAAAAAGACCAGGATTTT
GGGTAGTTGAAAAATTAGACAGGAGGCGGAGGGGGGCCAGTCCTGTATTT
TATTATAAACTGATGTATACAGGATGGGTTTGGGCTGCAAGACAGATTTC
TGCCTCAAAAAATTGACGGTGGGAAATTTGAATTTAGCACTGTCCTCACT
TACTAAAGATGGCATTCAAAAATTGTGTGAGGTTTTCATCAAAAACAGCA
AAAAAAAAGAAATTTGAATATCATTTTTAAAAATAACTCTTTTCAAACAA
AACTTCACAATATTGCTTCTAAATTAGATTGAAGTAGGTTGAAAAAAAAA
AATTGTAAAATGGGCCAAAATTGCGGCACAAATCAAGAAAAACACTATGT
TGATAAAACAGCAACCACAAATTTGTTCAATGAGTAAAAATCATTTTATT
CAGATGAAACTCGTAGCAAAAGGGTTTATCCACAAAATATCAAAAATGGA
ACCAAAATTATTGGGTCATTGGGCTAGAATTGCGGCTCAAAGTTGACGAT
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATGCTTTG
ATTGAAGCCACATTTCAAGCCCATTGAAAACCCTGCAGCCACAAATTAAA
CCCATAAGTATCTTAAGACCTTAAACTACCAATTTCAAGAAAAACGGGTA
AAAAAATATTCAAGTCTTAAAGCAGGACAGCACATAAGCCAACCCTAAAA
ATGCCAACTAATACCTAATGTAACAGCTCAGAAGGTTATTCTTACAAAAA
ATGGTATTTTTAGCCACAAAATCAGTCGAGGATTATGCCCTAAATAAGAG
AATACCCAAGTTAGAGGATTACCTTATTTAGGAGATTTTCAGTCTCTTAT
TTAAGAGAATGTTACCTAAACTAGGAGAATTCTGTACGTTTCACAAATTT
ACTTCAGAGCAGACTATTTGCGCAATATGAAAATAAGATCACGTGAAAGA
TCACGTTTCCGTGATTCCGATGACCCAAAAACCAAAATAAAATTTTCATT
CTTTTTCAAACTTCGAAAAACCATAAATAGCCTCATTTGCATGTGTTGAC
GTAATTTTTAAAATAATGAAGAAACACTACCCTCGACCTTCAAAACGCGT
TTTTTCTCAAACCCCCTTATTTAGGAGACAAGAGCGACTCACTTTCTGTT
TGACCCGCGTTTTGACCGCGCTTAGACGCGTTTCTTAAATATGGCCCGAT
CTATATTATTACTTTTCACGAAATTCTCATGATGTAGATCGGCCTTTAGA
TTGATAGACCCTAACCATCCTAGGTCCACNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTACAAGCTGTTGCATCC
AAAGTGATACAATCTGTCTTTTAAACAATAAAATTCTTATCCAAACTGAT
GATTCTTACAGCCTGGTTTTTGTTAGAGGGGTTAGTTTACACGATTTTTT
TTTATGAGGAACCTTAACTTTGCTCTGAGCCTGGAGTTCCTTATTTTTAC
AGAGAATTTCAGCCTCAAAGTTACTTATCGAGTTCCTTATTTACATAGCT
GCTACGTTTGGAATCGCAAAAATTGGATTCCTTAAAACTGGTTTTCTTAT
TCTCAGCCTGAGCAGTTCCTTATAAACGTGTTCCTTATAAAAAAAAGGTG
TATTTTAGTTTATTGCAGTTGATATTATACCCTATAGCTTATTTCTGTTT
ATATTTGTTTGTTTGTTTGTTTGTCTGTTTATGACAATTAAGACGGAGGC
AGGTCAACTAAATAAAGCCAACCAGAGCCAACAATGCAACTTTTTTCTAT
TTCAACTTCTTTCATAAGATTGACACAGTTTTGAATAATTTGAATAAATT
ACCAATCTATTGAAGAAAAAAATAAGGAAATCCATCCAATCCAAGCTTTC
ATACTGTTCTTCAATTTTTATCAACTTGATTTTTACTTCTTCTGATAGAT
ATATACTTTTATTGCCGTTATTACAGCTATATGAATAATATTTTACTTTT
GCCAAGGAATTTCCTTGTTTTACCTTTGTAATTAAAAGTTATGTTTGATT
TAAAGAACTTTTAAGAGGATCTGAGTTAGAACATGGTATATACAAGTCAT
AATAACAACAAAGAGCTGCTTTTGCTGGCTTTTGAAAGATTAGGACCATG
CTTGGCAAGTTGTAAGGTTGGTGTCTCCTATTTTCCTTGGTAATTTTAAA
GCCGGTACCCGGTACTAAAAAGGGGGTGGGGGTCCCTTTTTCCTTAAAAG
AAAGTAAGTACCCGGTACTAAAAGGGGGGTGGGGGTCCCTTTTTCCTTAA
GAAAAAGTAAGTACCCGGTACTAAAAAGGGGGTGGTGGTACCTAAGACAA
TTTTTCTTAAAAATCAGGTTAGTACCCTATGGGTTAGTACCCTGCGGCTG
TACCCCCCCCCCAACTCAACCAAATTTTGCTAGAAGGGAGAAAAAAACGT
GCTGAGTCGATCTATGAAGTTTAAAACTTGCGCAAAATGATGAGAAGGCC
AAAAATTAACGAAGAAAGAAAAGTCTCCTAGTTAAGAGAAAGAAATCTCC
TACTTAAGAGACCTTCTCTTAAATAGAGTATATCTCTTATTTAGGGCATA
ATCCTCGACTGAAAATGTACACTCTTTCTTAAAATAACACTGTATTGTGT
CAGATTGTGTTTGTTTTGCTTTAGGCTTTGCAAATATTCATGTTTCGAAA
AAAAACCCAACCTGGAATGTGTATATTGAGAAATTAGTGATTGAAGTATG
ATTGAAGCCACATTTTAAGCCTATTGAAAACCCTGCAGCCACAAATTAAA
CCCATAAGTATCTTTATAACTACCAATTTCAAGAAAAACGGTTAAGAAAT
ATTTAAGTTTTAAAGTAGGACAGCACATATAAGCCAACCTGTTGAGTAAG
CCACATGACATACAGTTAGGGAAACCATCCAGGATCCTGCCATTCTATAA
GCCAGCAAAAACTAAATGACACTTGTAAACTTAAGTTTCTTACCATTTTC
CATCGAAAACAACAAAAACATTGCTACTTCCCAAAGCCGGAGACCAAAAC
AAATTATCTTCCAAGATTATGGCGCCCTTTTAGATCTATTGTTAAGGCCA
TCTAAAATGGTGGAAAGAGTTGCGGAAAGACAAAAGCGCCCGCTGCTTTG
GGGTGGTAACGCCAAAACGCCCAGTATGATCTTCCAACAGAAGGCGAGTT
AGTTGCCGCGCGAGTTACGTCATGCACTCCACCGCAGCGCATAACGAAGC
ATGTTTCAATGAATATCATTAATTATAAGAATATCTTATGTGCTTACCTT
CAGTAAACTCCGAGTGCTTCATTAAGAGCAATTGCACCTAAGAAAATCCC
TGAATCATCTAAAGTGGGATCATTGATGTCTTGGATTTCTTTCTTTTTTA
GATATGTTGTGGGGGTTCATGGGTGGAACGAAATTCCAAAATTTGAGCCT
CAGAGCTAAAGCTGTTCCCGAGATATCGCATTTTGAAGTTTCAAAAATTG
TGTCTAAAATACAGACCGGCAATTTACAGACCATAATTCCAAATTGCTAT
AACTCCTTATTGGTAAGTCTAAATGACATGAAATTTTGCACAGATACACA
AGACCATAAACATTTTCTAAAAACAAAACAAAAATTTAAAACTTTTTTCC
AAAATGGCGGATATTTGAAGCCGAAGTTTTGAACTGCTTGAAAATACCGG
TTGGATTTGATTCTCAGTTATTCCCGGCCCGAGATTCCAAATTGAATTTT
TTTTTCAGATCCTGAAAGATCAATCTTTTCACTACCAAATATCCAAAATC
TGTCGTGGAGAATTCATTTTTGGCTCAATAAATCAATTTTAAAGATGACC
TATATTTTCCGAAAATTCCCTAGCAACGCCCTAGCAACAAGGTTTTAACA
GGCTACACCATGTACCGGAAGGCTCAAAAATTGGTTTTAATGATTGACAG
TCCATTTCTGGACAGTTGTGATCCTAGACTGATCAAATCATTAGAGGATA
TTCCTCTATATGCAAAAGAAATTCATAATTTGCACTGCCTGCGATGATAT
TAAGAGCCATTTTTTTAAGTCCAAGTGTTGTGATTAACTTTAGACTGTCC
ATTATTTCTTGTCCAGAAGATTTAAACATCATTGTTTGCAGTATCTCATA
AAATATCACCCTAGTAATGTTATTTAAGAATCAACAAGTAGTTAGTGTAC
ACAAATATAGAGATATTGGACAGACTAAAAGTTAATCATGACACTTGGAC
TCAGTTGGACTTAGAAATTTTGCGGAAAACTGCAAATTATTGTCAAAGTA
GGATTTCTGAATGATTTTAAAAAGTTTTNTAAAGCGCAAATTATTGTCAA
AGTAGGATTTCTGAATGATTTTAAAAAGTTTTTGAATAGGAATTAGGTAC
TGTTAAACCCATTTAGTTGAAGTTACCTGCTTATATTTAAGAGCAATATT
CACCAAACTGTGAAAGATTGAGGCTTTTCCTGAAAATATAGGCCCTGGAA
TGGTAGGAAAGGCCAGAAGTCAGTCTCGCATTTTTTTACATATTCTGTAC
TTAGAAATAAAGAAACAGTCATAAAATGTCACCCGTTGATGGAAATGACC
TGAAATCTTTTACAGCTGTTCCCTTAATGCCAATGGTTGGTTGGCTAGAG
AAGATCAACCAATATTTTGACAAAAATTAACCTTTAGAGCCCTTAGGTGG
GCCTGATTTAGCATTTTAAGAGGGAAAAAAAAACGAAGTTAAGCAAATTT
TCAATCAATCATATCTTTAAGAGACTTCAAAAACCCACTGAGATTTTTTG
AGACTATAAACTAGACCTCCTAAGGAAGCCTTGCTGAAAATTTCAAAAAA
ACTTGTTGTTGCCACAAAAAGATATGCCATCTTGAATTTTGCTCCAGATC
TGCCAAAAAACAATTTTTTCGGCCATTTTTGACAGTTACACTAATATGGA
AATCCTGAAAATGTTGTTTTTGTGGCGAAAAACCACCAGTAAACCACTCC
AGGTCAAAAGTTTGCTTTAAAAAAGTCTCAAGGACTATCAGCAGCCAGCT
AAAAGTGCTTCCAAACCCATATTACGCAAAGTCTGAAGCCCTCTACAGGA
GGTGCTAAAGATTTTCGGGGAAAATTTTGGAGACTCAATTTGATTTTTTC
TGATACCCAACAAAAAGTCTTGAAATCTTGAAATCCACTGTAAATCAGCT
TTCTAATGTACTTGAATAAAAATTCATTGGCTTTCAAAATCTGCTCCTCA
CCAGAGTTCATGAAATTTAANATAAAAATTCATTGGCTTTCAAAATCTGC
TCCTCACAAGAGTTCATGAAATTTAAGGGTCAATTTTCGCTTAGTATAGT
ATTAGCCTATCTTTGAGACGCTGTATCTTCAAATCTACGTGAGATATCAA
GGTGAAATTTTCAGGGTCTTTTTTTCTTGTGTGATAGATCATTTGGTCAA
AATTTCATCAAAATCCAAGAGGATGAGGTATAACACGCTGAAGACTCTTA
AAAAAAAATGGCTCTTAATATCATCGCAGGCAGTGAAAATTATGAATTTC
TTTTGCATATAGAGGAATATCCTCTAATGATTTGATCAGTCTTGGATCAC
AACTGTCCAGAAATGGACTGTCAATCATTAAAACCAATTTTTGAGCCTGT
TAAAGCCTTGTTGCTAGGGCGTTGCTAGGGAATTTTCGGAAAATATAGGT
TATCTTTAAAATTGATTTATTGAGCCAAAAATGAATTCTCCACGACAGAT
TTTTGATATTTGGTAGTGAAAGGATTGATCTTTCAGGATCTGAAAAAAAA
ATTCAATTTGGAATCTCGGGCCGGGAATAACTGAGAATCAAATACAACCG
GTATTTTCAAGCAGTTCAAAACTTTGGCTTCAAATATCTGCCATTTTGGA
AAAAAGTTTTAATTTTTGTTTTTGTTTTTAGAAAATGTTTATGGTCTTGT
GTATCTGTGCAAAATTTCAAGTCATTTGGACTTACCAATAAGGATTTATA
GCAATTTGGAATTCTGGTCTGTAAATTACCGGTCTGTATTTTAGACAAAA
ATTTTGAAACTTCAAAATGCGATATCTCGGGAACGGCTTGAGCTCTGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTGTTCC
ACCCATGAACCCCCACAACATATCTAAAAAAGAAAAAAATCCAAGACATC
AATGATCCCACTTACAGATTTTCTTAGGTGCAATTGCTCTTAAAAATGAA
GAAGATAAGAAGATAAAAAATGCGCTGGATAATTTCTATTGTAACAGTTT
GGTCAATCATTGCTGAAAGTTTGAAAAAGTTTTTCCGACGCAAAAAAAAA
TTTCACCCAATTAAAATCACAGTGTGCTTATACTTACTATGTTTACTACA
TTGTCTAGGCTAAAAAAAGTGCGAAAAGACACAAACGCCATTTTTTAGTG
AGTGATGCTATGATTTTTTTGATTGCGGCCGCGTACAGGAACTCGCCAAA
TGTTCCTAACTGACATACAGCCACAAAACCTGCCCTCACTTTGACATCTT
ATATTTCAAGACTGAATCACTCAACTTCAAAGAGGGCCACATTTTTGGAA
AGCTCATCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGAATTTTGTACTACACAGCAGCC
ACAAGAATGTCAACGCTGTGGGCTAAAAAGTGGTTGTGATTGAAAACCTC
ACTTTTTGGGGTTCTATTTTTGAATGGAATCTAAAATTTACCGTAAGTTG
GTCTAATCTCGACATCCATCCGTCTTCTAATTTCGACACCCTTCTAGCAA
CTCCAGAAGATTTTTCAAATTTTGATTTTTTTTTCAAAACCTATCCTATC
TTGTAGAGCTGTGAAAAAGAAAGAAAATGAGGGGTCATAGGATTCCAGAG
GATAAGTAGTTGTAAAGATATTCAAATTTTAGTGTCAACAATTTGACTAA
AAATGTCAAACAAAAGGTTAAGAAAATAGCTTGGAAAAATTCGAAAAATG
TGTCAAAAAAGAAAAAAAATATATTTCCCAGTCATGCTTCTTTAATTTTG
CATATCTCTTTTTCTAGTGTAGCTAGAGACCTGAAATTTGGAGAGAGAAT
TCTTTGATGGTGTTAGAATATTATTATATAAAAATATTGGTGAAATATTT
AGTATATTTATGAAAATAACGAAAGATGTATCTTTTTTTGAAAAAAGAAG
ACATTGCATTGTTTTATTTTGTTTTTGAAGAAAAGTAGCTTGGAAAAGGT
TGAAATGAGTCAAAAAAGGTGGTAGGACCCATTTTCAAGGGGCCTCTGGA
AATGGAGGAACAAAAAGTTATAAGTAAAGAATAAGTTTTTCTGAAAGGAG
AAACCCCAAATAAAAAGAAAATCTATTTCGGCAGAAATATAAACTTTTTT
TGGGACAATCTCATGCTAAAGAAGCAAAAAAAGTGAAAAAAACTACATGA
AAATGAAAGAACTAAAATTAACGAATGTGATTTTTGAATAGACCTTTTTT
CAAAGAGGCCACCCTGTTGAATATTTATGTAGTCCAGCAGAAAAACAATG
ATAAAACCATACATNAATATGCATGATACAGTAATTATGCATGGCTCTAT
CATTGTTTTTATGGCCGGACTACATAATTATTCAACAGGACGTCCTCTTT
GAAAAAAGGTCTATTCCTCACCCTTTTTCTGATAAACATACAAAGTTTCA
GCCTTCAACAACAATTTCCTCCATTTCCAGAAACATTTGTTCATCGATAG
CTGCAAATTCTTTTTCTCCCATCGGAAGACAATTAAAAAATGTTGCAAAA
ACGTTCGGCACTTTACCAATTTGCCGTGTAGCCCGAGTCCACAGTGTTAT
ATACCACTGGAAAGCTAAGATCACGGGCTTTCTTTTAGTAAAAACCAGAA
CGCTTTAGTATACATAGAAAAAAAGTTAGAAGGGTTCAAAGTTCACGGAA
AAATGAAACATTTGGTTTGACGTCAACGATAGTTGCGTGACTTCTGGAGT
CGCTAACCCTTCTTTAGGAGATAGGAATAATATGAAAGTTGGAAGCGGTG
ATGGAAAAATAATTTTTCCTCTCTTACCACCAGTCAGGGCCTCCTTGGTC
TTTTAATAACATTAGTTCGGATAGATTAAAAACATACCTGATCAACACAA
CCAAACCTTCTGTCATGCGTTTACTCTTTCTTTCCCAACAACTTTCGTTT
TTGGTTATGTAGGTTTTAAAATCCACAAGTAGTGAACCTCTTATAGCTTT
ATCTGAATAAACCTGGTTGAAAACCTTCTGTCAGGTTTCACTCCGTATGT
TTTTTATCTACGTGGTGAACCGGTTTCCCCTATTTCCTGATAATTAAAAA
TTGGAACTTTCCCGTGGGCGCGATTGGGCGTACCACCATTGCAAAATATT
TTTCGGGAAATTTTTACCGTATTCTAACGCTAATATAATCTAGATAGGAA
ACAAATATTAAATTTAATTATTATTTTTTTTCATATTTCTAAATTTCACA
ATAAAAAGAACTATTTACAAATTATTTTCTTTAACAGGCGTTGAATCAAC
ATTGACATATTTAATGATGTCATAATCAGCCCTGTGAATTCAGACAAAAT
CATAACGGCACGGAAGTGCCAACCAAAACTGGCCATTTTGCCGACCTAGA
GGTCATTTTGGGTTGGCAAAGCCGTCCTAAGTAGCTTGTTTAGGTCGGCA
AAGACAATAAATTTCCTACAGTTACTTAAACTATCCTTAATAATTGTGTT
AATAAGTTTTATGTTTTATAAAGAGAATGGAATGAGGCTCGATTATCATG
TGTTATCAAATGATAACACAATTAGATTAACCTAATAAATAATATTTTTC
CTCTTTAGGTCGGCTTTCCCGACCCAAAACATTTCTTTTCTTGGCACGCC
GACCTAGAGTGTAAATTACGTCAGCAAATAAAAGCCAACTTCAGCTCAAG
TTACGTCGGCTTTCAGGTCCGCATTGCCGAATGATGAAGAAGTGTTGGTT
TCCCCCTCATTTTGGTCATTTTGGAATCGCATATGTACTTATGAATATGC
CCAGGTTGAGATTGAGGTTGAGATTGTTTGGACAAATGAGTCGGGTTTAT
CGAAATTGGATGTTAGATTTTTTACAGCTCCAATTTCTACAATAAATTTT
GAATAAGATAGTTCAAGGCTTTAAAAATTCAATGAAGCAATGGTAAGGGG
ATGAGGTTTTTCAAAATGATGGACTATTTAAGGATGTAATTACATGCTTA
CCACCAATTCAGCTCAATTCCAATTAGCAAAATACCTGTAATTGCACCCT
CAAAATCTTAGAAGTGTGAGTGTAGTATGAATAAGAAGATTTATCAGACT
GAAGTAAGGGGTACACAGCTGCAATCTACATTCACTAAAATTTTGGTAAA
AACAGTCTTTTTGGTGGAAAAACTCTAGAAAAAGTGCCCTTTTTTACCAA
CACTTGACGCTGCCCTGCCTTTCTAAAATCTTGCCTTTTCATTAGCCCTC
CCCCCTCTTTGAAAATTGCTTGGACTGGGCCCCTCTTCATTCACTCCATT
TGCTATACCTGGGAGATCGAATGCTGAGGTGGAGCGCCACACCTACTCTC
CGCTCCCACTAACTTTCCGCTTGGATCAGTTTACCCAATCTGCGCTGAGT
TGACGGTGACCAGGGATCGAACCCACAAACCTTAGATTGTAAGGCGAATG
CTCTACCGACTGAGCTACTCAGCCACTGAATAGTTCCTAACTAGTTCTAA
TAATGTTCTTAAAACTAATAACGATTGGTACAATATTCATTCATTGTCTT
TTTATGTTTGAATAAAACATCATGTAGAATGTTGAACAAATCGCCAAAAA
GAAATTCCAGCAGATAAACTTTTTTTGTTGCTCTATTGCCCCTGTGTCAC
CCCTCGTTGACATCAGCAAGCAACCATTATGACCAACCGTTAACTCTCTT
GAAAGATTTCAAATCACACTATAGCTTGAACAAGGTGCTGTCTGAAAATT
GGTGGTTTTTATATAATATATTTTGTAGACAGGCCAGAAAACTCTGATTT
TGTCATTCTGTGAATCTCCATTGTTATCTGTTTCAGGTCAGATCGAGATT
TTGATAATTTCGGGGGTGGATACGGAGGTGGACGTAGAGGGCGTGGCGGA
AGAGGCGGCCGTGATCGAGGTGATCGAGGTGGCAGAGGCGGTGGTGGATA
CAACAACAGAGGCGGTGGTGGTGGAGGTATCAAAGTTTCAATAATCTATC
TTTTTAATAACCCATATATTTAGCTTCAAAACTTATTCTACAAGTCAATT
TTTCGAATCTTCAGGGCTTTTGAAACAAGGAATTGAGTGTCCTCTCACAA
ATTAAGAAAGATTTTCTGCAATGAATTAGGGTGGTTTAGATTTGTATATC
CTTAGTTTGAATGATTTATTTAGGTTACTACCAAGGAGGTGGTGGTGACA
GGGATGCGCCGATTCCAGAAGAACCACCTTTCACAGCGTATGTAGGAAAC
CTTCCTTATCAATGTGTCCAAGGAGATGTGGACCAAATCTTTGCAGAGCT
CAAGGTTCGTAGTTTATGACTTAATTTAATACTTAGTTGATCCAATCTTT
GATCTAATCACTGTCACTTTCTCGCGTAAAAACTATGTTAACAGCCTTTT
CAATGCTCTAATCGTGGTGAATTTATTAATTGTTTATTGTTGAAATTGCG
TTGTAAACTTGTTGTAATCTTGTACTATTTTAGGTGCGAAACATCAAACT
AATACGTGATCGTGAAACTGACAAATTCAAAGGTTTGTGTGTACCTCTAT
CAAAAGTTCCAATCAAAATATAGTTTAAGTGTTAGGGTAAGGGTTTATGA
CTGAGTGATCACAGGAGTCATAAATGTAGAAGTCCTAGATTATGAGGCAG
AGTGAAAATGCCCGCTCTTAACTTACTGGACCGTTATTTTTTTATTTCAG
CTACAACGCATAAAGGAGTGATTATAGGAAAGTCTCTAAGAGATTCTCTA
AAGGACCTCCTAATATTCTTAACCCTTGAAACTACAATCAAGCCTTTATT
CAGAAATAAAATGATGATGTAAGTAATATGAAAATTTATTTTTAGGATTC
GCATACGTAGAGTTTGACGACAAAGAATCGCTGATAAAAGCATTAGAGTT
CGACCAAGCACAATTTGGTGATCGAAACTTGAAAGTAAACGTTTCCCGCA
ACAATAGACGCGGTGGCGGAAGGGGCGGCCGTGGCGGTGGCGACGGTGTG
ATTTTATTTTGTAACCTTAGCATGAACTATCGATATGACCCAGACTGAAT
AGTTTTTTTTTACTTTACAAATCAAGGGTTGGAAGTTAACAGTGCTTTCG
AAAGAAGCTGTCAAAATCTTTCCTCGTTAACAACTTCTTTTTCTATAGAT
CGTGGTGGTCGTGGTGGACGAGGACGTGGCAGCGGCGGCGGATTCGGTGG
CGGATTCGGTGGCGGTGATCGATATAATAATGAGTTCCCCCGTGATGGAG
GTAAACATTCAAACTATTTTACTGAGTATTTTATAAAAACTAGACTAAAA
ACTACTAGACTAGTAACTGGTAGTCACTCATAACTTTTATGAAGATTAGT
CATTCTCCCACCGATTTTTCCTTAAAATAAGATTATCGCAACCTGCTTTA
TTTATAACAAGGGTTGCTACGTCTGCCAGAAATGTCTTGAATTAGGTTAA
AGGCTGGAAATGTCTGGAAAGTCTGGAAAAAGTCTCGATTTGGCATAAAT
GTCTGGAAAAAATATGGAATTTGAAGGAAATAGTCCTGAATGAAGCCTAG
TAAACTTTCCGGAAATAGTAAACTTTTATCCTGGTATTTGAAATTCCCTA
AAATTTCTGCTCGCTTCGCTCGCACCCAATCTTTAAGTCATGTAAATTTT
GAAATTTTTCATTCCCTTCTATTCATCAATCTGGTCTTTCAAATGACGTT
AACGAAAAACTGAAACCTTCCCAATGGATAAAATGTCTGGAAATTTTGTG
GCCTTTTCAAGTAAAAAATCTGGAAAAACATGACTTTTGAGACTAAAAGT
CTGGAATTTTGAACTTGGAAAACCTGTAGCAACCCTGATAACATAATTAA
GTTGTTGTTGTTGTAGAAAGGTTGATTATCGCTCTTTGTCTGTTTCAGGC
TTCGGTGGTGGTCGCCGNT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010647XLOC_010647Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018999-exon-sc0000314-1575043694:224820..224949TCONS_00018999-exon-sc0000314-1575043694:224820..224949Clytia hemisphaericaexon
TCONS_00018999-exon-sc0000314-1575043694:213324..213463TCONS_00018999-exon-sc0000314-1575043694:213324..213463Clytia hemisphaericaexon
TCONS_00018999-exon-sc0000314-1575043694:212996..213126TCONS_00018999-exon-sc0000314-1575043694:212996..213126Clytia hemisphaericaexon
TCONS_00018999-exon-sc0000314-1575043694:212768..212816TCONS_00018999-exon-sc0000314-1575043694:212768..212816Clytia hemisphaericaexon
TCONS_00018999-exon-sc0000314-1575043694:212305..212454TCONS_00018999-exon-sc0000314-1575043694:212305..212454Clytia hemisphaericaexon
TCONS_00018999-exon-sc0000314-1575043694:212050..212151TCONS_00018999-exon-sc0000314-1575043694:212050..212151Clytia hemisphaericaexon
TCONS_00018999-exon-sc0000314-1575043694:211381..211401TCONS_00018999-exon-sc0000314-1575043694:211381..211401Clytia hemisphaericaexon
TCONS_00018999-exon-sc0000314-1510915933:224820..224949TCONS_00018999-exon-sc0000314-1510915933:224820..224949Clytia hemisphaericaexon
TCONS_00018999-exon-sc0000314-1510915933:213324..213463TCONS_00018999-exon-sc0000314-1510915933:213324..213463Clytia hemisphaericaexon
TCONS_00018999-exon-sc0000314-1510915933:212996..213126TCONS_00018999-exon-sc0000314-1510915933:212996..213126Clytia hemisphaericaexon
TCONS_00018999-exon-sc0000314-1510915933:212768..212816TCONS_00018999-exon-sc0000314-1510915933:212768..212816Clytia hemisphaericaexon
TCONS_00018999-exon-sc0000314-1510915933:212305..212454TCONS_00018999-exon-sc0000314-1510915933:212305..212454Clytia hemisphaericaexon
TCONS_00018999-exon-sc0000314-1510915933:212050..212151TCONS_00018999-exon-sc0000314-1510915933:212050..212151Clytia hemisphaericaexon
TCONS_00018999-exon-sc0000314-1510915933:211381..211401TCONS_00018999-exon-sc0000314-1510915933:211381..211401Clytia hemisphaericaexon
TCONS_00018999-exon-sc0000314-1491911889:224820..224949TCONS_00018999-exon-sc0000314-1491911889:224820..224949Clytia hemisphaericaexon
TCONS_00018999-exon-sc0000314-1491911889:213324..213463TCONS_00018999-exon-sc0000314-1491911889:213324..213463Clytia hemisphaericaexon
TCONS_00018999-exon-sc0000314-1491911889:212996..213126TCONS_00018999-exon-sc0000314-1491911889:212996..213126Clytia hemisphaericaexon
TCONS_00018999-exon-sc0000314-1491911889:212768..212816TCONS_00018999-exon-sc0000314-1491911889:212768..212816Clytia hemisphaericaexon
TCONS_00018999-exon-sc0000314-1491911889:212305..212454TCONS_00018999-exon-sc0000314-1491911889:212305..212454Clytia hemisphaericaexon
TCONS_00018999-exon-sc0000314-1491911889:212050..212151TCONS_00018999-exon-sc0000314-1491911889:212050..212151Clytia hemisphaericaexon
TCONS_00018999-exon-sc0000314-1491911889:211381..211401TCONS_00018999-exon-sc0000314-1491911889:211381..211401Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000314supercontigsc0000314:211381..224949 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
42.5213	53.072	46.2434	70.1392	0	0	0	1.73648e-09	60.9261	87.3068	62.5155	50.9881	50.5883	57.8623	61.3111	89.1549	107.874	47.3426	18.2345	35.6072	94.7311	125.863	71.2788	67.7518	13.0568	0	50.2964	59.916	50.4142	53.6132
Blast
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BLAST of TCONS_00018999 vs. Swiss-Prot (Human)
Match: IF4H (Eukaryotic translation initiation factor 4H OS=Homo sapiens GN=EIF4H PE=1 SV=5)

HSP 1 Score: 112.849 bits (281), Expect = 1.698e-29
Identity = 47/81 (58.02%), Postives = 68/81 (83.95%), Query Frame = 3 
Query:  309 IPEEPPFTAYVGNLPYQCVQGDVDQIFAELKVRNIKLIRDRETDKFKGFAYVEFDDKESLIKALEFDQAQFGDRNLKVNVS 551
            +P EPP+TAYVGNLP+  VQGD+D IF +L +R+++L+RD++TDKFKGF YVEFD+ +SL +AL +D A  GDR+L+V+++
Sbjct:   36 LPTEPPYTAYVGNLPFNTVQGDIDAIFKDLSIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDGALLGDRSLRVDIA 116
The following BLAST results are available for this feature:
BLAST of TCONS_00018999 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IF4H1.698e-2958.02Eukaryotic translation initiation factor 4H OS=Hom... [more]
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