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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019010 ID=TCONS_00019010|Name=TCONS_00019010|organism=Clytia hemisphaerica|type=transcript|length=1062bp
TTTTTGTTCCGTTTTTCTTATGACAGCATACCTTTGTAACAAAGTCACTC
AAAATGTTTCGAAATGTTCTTAGATATATCGTAGGGTTGATCACAGAGTT
AAATGCAGCTAGAAGCTGAAATGAAGATAAAAGTTGCACTCTAGTCCATG
GGTCTATTCTCGGTGATCCAGTATACGCGAAAATATACATAAATGAAATT
GGTAGCCAACAAACCATAAAAAGTCCAACTATTACTGTTGCTAACTTGGT
GTATTTTAGTTCGTTGCTACTACTCGTTTTTAAGTTTGATTGTTGACCCA
GTGTGCCAAAACATTCGGTTTTATTATCTTTCTGGTAATGTTTCATTTCA
TACTCCTGAAGTCTTTTAACCAAAGCTGTACTCCTCCGCCAAATCATGAA
ATAACAGCAAATTAGAAACACACTGGTTGGTAATGTCAAACACGGCAACA
AGATTGATAAGATCGAATCTAAACTTGTCAATTCGTTACTCGCAAATTTA
TACCATATCAAAATCGCTAAAACCAAACCACAAAACCATGAAATTATACA
CGCGTAAATCGCAAACTTTCGAGCATAGTATCGATATTTAATCGGTTTTA
AAACCAATGCTAATCGATCAATAGTCACCGATATAAGCACCAGGATTGAT
ATCAACCACGAGACATGCAGTAAAATAGATAACACCATAACAAATGAAGA
TGAATGTTGAAATGCCAATGGAATTATCAGAGCTATCAGTAATATTAATC
CAACCAAACCATCAATAATAGATAGATTTAACAAGAAAATATGAGAACTG
TCAAACTTCTTTCTATCGTGTGGTCTACGGTTAGATGATTTTCTCGATTT
ACCAACGATGACGATGATTTGTAGAATGTTGAATATCAATGCAAACAAAC
CAACAAGGATCCACAATATGGTGAATATTTGGAACACAACTTTGGATGAC
GTTGGCAAACGTAATGTCCCTGTTGGTTTTATGGTGATGTTCTGATTTGC
TGATAACTCCATGCTTGTACAGTTGAGAAAAGAGTAAAGGCTATCTGAAA
ATACACGAAAAC Run BLAST on NCBI protein sequence of TCONS_00019010-protein >TCONS_00019010-protein ID=TCONS_00019010-protein|Name=TCONS_00019010-protein|organism=Clytia hemisphaerica|type=polypeptide|length=353bp
FRVFSDSLYSFLNCTSMELSANQNITIKPTGTLRLPTSSKVVFQIFTILW
ILVGLFALIFNILQIIVIVGKSRKSSNRRPHDRKKFDSSHIFLLNLSIID
GLVGLILLIALIIPLAFQHSSSFVMVLSILLHVSWLISILVLISVTIDRL
ALVLKPIKYRYYARKFAIYACIISWFCGLVLAILIWYKFASNELTSLDSI
LSILLPCLTLPTSVFLICCYFMIWRRSTALVKRLQEYEMKHYQKDNKTEC
FGTLGQQSNLKTSSSNELKYTKLATVIVGLFMVCWLPISFMYIFAYTGSP
RIDPWTRVQLLSSFQLLAAFNSVINPTIYLRTFRNILSDFVTKVCCHKKN
GTK Run BLAST on NCBI transcript from alignment at sc0000314:68960..70021 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019010 ID=TCONS_00019010|Name=TCONS_00019010|organism=Clytia hemisphaerica|type=transcript|length=1062bp|location=Sequence derived from alignment at sc0000314:68960..70021 (Clytia hemisphaerica)
GTTTTCGTGTATTTTCAGATAGCCTTTACTCTTTTCTCAACTGTACAAGC
ATGGAGTTATCAGCAAATCAGAACATCACCATAAAACCAACAGGGACATT
ACGTTTGCCAACGTCATCCAAAGTTGTGTTCCAAATATTCACCATATTGT
GGATCCTTGTTGGTTTGTTTGCATTGATATTCAACATTCTACAAATCATC
GTCATCGTTGGTAAATCGAGAAAATCATCTAACCGTAGACCACACGATAG
AAAGAAGTTTGACAGTTCTCATATTTTCTTGTTAAATCTATCTATTATTG
ATGGTTTGGTTGGATTAATATTACTGATAGCTCTGATAATTCCATTGGCA
TTTCAACATTCATCTTCATTTGTTATGGTGTTATCTATTTTACTGCATGT
CTCGTGGTTGATATCAATCCTGGTGCTTATATCGGTGACTATTGATCGAT
TAGCATTGGTTTTAAAACCGATTAAATATCGATACTATGCTCGAAAGTTT
GCGATTTACGCGTGTATAATTTCATGGTTTTGTGGTTTGGTTTTAGCGAT
TTTGATATGGTATAAATTTGCGAGTAACGAATTGACAAGTTTAGATTCGA
TCTTATCAATCTTGTTGCCGTGTTTGACATTACCAACCAGTGTGTTTCTA
ATTTGCTGTTATTTCATGATTTGGCGGAGGAGTACAGCTTTGGTTAAAAG
ACTTCAGGAGTATGAAATGAAACATTACCAGAAAGATAATAAAACCGAAT
GTTTTGGCACACTGGGTCAACAATCAAACTTAAAAACGAGTAGTAGCAAC
GAACTAAAATACACCAAGTTAGCAACAGTAATAGTTGGACTTTTTATGGT
TTGTTGGCTACCAATTTCATTTATGTATATTTTCGCGTATACTGGATCAC
CGAGAATAGACCCATGGACTAGAGTGCAACTTTTATCTTCATTTCAGCTT
CTAGCTGCATTTAACTCTGTGATCAACCCTACGATATATCTAAGAACATT
TCGAAACATTTTGAGTGACTTTGTTACAAAGGTATGCTGTCATAAGAAAA
ACGGAACAAAAA Coding sequence (CDS) from alignment at sc0000314:68960..70021 >TCONS_00019010 ID=TCONS_00019010|Name=TCONS_00019010|organism=Clytia hemisphaerica|type=CDS|length=1059bp|location=Sequence derived from alignment at sc0000314:68960..70021 (Clytia hemisphaerica)
TTTCGTGTATTTTCAGATAGCCTTTACTCTTTTCTCAACTGTACAAGCAT
GGAGTTATCAGCAAATCAGAACATCACCATAAAACCAACAGGGACATTAC
GTTTGCCAACGTCATCCAAAGTTGTGTTCCAAATATTCACCATATTGTGG
ATCCTTGTTGGTTTGTTTGCATTGATATTCAACATTCTACAAATCATCGT
CATCGTTGGTAAATCGAGAAAATCATCTAACCGTAGACCACACGATAGAA
AGAAGTTTGACAGTTCTCATATTTTCTTGTTAAATCTATCTATTATTGAT
GGTTTGGTTGGATTAATATTACTGATAGCTCTGATAATTCCATTGGCATT
TCAACATTCATCTTCATTTGTTATGGTGTTATCTATTTTACTGCATGTCT
CGTGGTTGATATCAATCCTGGTGCTTATATCGGTGACTATTGATCGATTA
GCATTGGTTTTAAAACCGATTAAATATCGATACTATGCTCGAAAGTTTGC
GATTTACGCGTGTATAATTTCATGGTTTTGTGGTTTGGTTTTAGCGATTT
TGATATGGTATAAATTTGCGAGTAACGAATTGACAAGTTTAGATTCGATC
TTATCAATCTTGTTGCCGTGTTTGACATTACCAACCAGTGTGTTTCTAAT
TTGCTGTTATTTCATGATTTGGCGGAGGAGTACAGCTTTGGTTAAAAGAC
TTCAGGAGTATGAAATGAAACATTACCAGAAAGATAATAAAACCGAATGT
TTTGGCACACTGGGTCAACAATCAAACTTAAAAACGAGTAGTAGCAACGA
ACTAAAATACACCAAGTTAGCAACAGTAATAGTTGGACTTTTTATGGTTT
GTTGGCTACCAATTTCATTTATGTATATTTTCGCGTATACTGGATCACCG
AGAATAGACCCATGGACTAGAGTGCAACTTTTATCTTCATTTCAGCTTCT
AGCTGCATTTAACTCTGTGATCAACCCTACGATATATCTAAGAACATTTC
GAAACATTTTGAGTGACTTTGTTACAAAGGTATGCTGTCATAAGAAAAAC
GGAACAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019010-exon-sc0000314-1491911889:68960..70021 | TCONS_00019010-exon-sc0000314-1491911889:68960..70021 | Clytia hemisphaerica | exon |
| TCONS_00019010-exon-sc0000314-1510915933:68960..70021 | TCONS_00019010-exon-sc0000314-1510915933:68960..70021 | Clytia hemisphaerica | exon |
| TCONS_00019010-exon-sc0000314-1575043694:68960..70021 | TCONS_00019010-exon-sc0000314-1575043694:68960..70021 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000314 | supercontig | sc0000314:68960..70021 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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