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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019080 ID=TCONS_00019080|Name=TCONS_00019080|organism=Clytia hemisphaerica|type=transcript|length=1286bp
ATATAGACTAATTTTTGGTTtataagctttagaaattaggcTAAAACGCC
TCAGATCCAGTCTAAAAACCTACGTCGTAGATTCTGTACGTCATTAATAG
CTTcatgcttaacctcgctaatgtATTTTGCGAATTAAACAAAAATAGCG
ATGATAGGAAATGCATTTGCGTTAAGGGTAATCTACCATGGCCTAGAGTG
TCTCCAAACCTACCAGGCATGGCCGTACGCTGATATATCATATCGCATCA
AACCTTCCACAAATGAACCATGAAAACGTTCTTCCGTGTGACGAAATCAG
TGATCACGACGGTCCGTATGTTATTTTCGACGTCCACAAACCTCGTTTCG
AGCCACGATACAAACACATCCGAATGGAAACTGATTTCAACGCTGCTTAA
TTTGTCCCTGATGTTGAGAAATTCTTTCAGGGATTTGAGTTGCCAGAAGA
CAAACTACACTGTTTTTTAATGAACTGTTTTCATCCCGTTTAAACGAACT
TGCAACACTAGTTAAATGCAAAATCATTAGACCACCCGCGGCTTCATGAC
TGAAAGAACTCGAATATTTTGAACTGACCAATAAGATCGAAGGCAGAAtc
agagaaaaaaagagaagacCACTTGTTACGAAAGACGAAACATTCTGCGG
AAATGCAGGGATTTCTTGATACCTTGCTGAAAAGACACCCAGAGGGGAAC
AACAACGAACGCAAGACATTCGATACTCTATACGATTCGTGTTTTCCTTG
TTTATGGTCAAAGACAAAATCTAGCTTAAATGAGGCCAAATCTAAAGTTG
TTATCGACACGCTTGCAATTGTGGCTTACACCTAACCATTTTCCTTCTTG
AAAAGCTTTAAATTGCTGGGTGAAATCAATGATGGTTTTCTAGATAGGAT
GCTGATTTCCAAATCTCCTTCAAGTAGAAGAGGTTGAAAATTGCTGTGAA
AAATTATGTTTGCTCCCACTACAAAATTTCCATAATAGTAAAAGTTGGTT
GAATTCTAATATAAATGTAATTAGAATTTGCATTATTCTTTAAACTTCAG
TTGAAGTTACAGCTATATCATATTCCTGGTCTGAGTGAAATTGGCCTATG
TATGGTAACGTAACGATGGAAGGATTGGGTCGGTAATGATGATTGCAAAA
TCTGTATCATAAATGAGGACGTCTGCTACCTCCAACACAATACAAACGAG
AGATATATCCCACAATGGATTTTACCAGTAAAAAGGATACCTtcgaattt
tcagaaaaagtgtTGAATATACTGCTGCTGGCTGCA Run BLAST on NCBI transcript from alignment at sc0000317:331561..332846 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019080 ID=TCONS_00019080|Name=TCONS_00019080|organism=Clytia hemisphaerica|type=transcript|length=1286bp|location=Sequence derived from alignment at sc0000317:331561..332846 (Clytia hemisphaerica)
TGCAGCCAGCAGCAGTATATTCAacactttttctgaaaattcgaAGGTAT
CCTTTTTACTGGTAAAATCCATTGTGGGATATATCTCTCGTTTGTATTGT
GTTGGAGGTAGCAGACGTCCTCATTTATGATACAGATTTTGCAATCATCA
TTACCGACCCAATCCTTCCATCGTTACGTTACCATACATAGGCCAATTTC
ACTCAGACCAGGAATATGATATAGCTGTAACTTCAACTGAAGTTTAAAGA
ATAATGCAAATTCTAATTACATTTATATTAGAATTCAACCAACTTTTACT
ATTATGGAAATTTTGTAGTGGGAGCAAACATAATTTTTCACAGCAATTTT
CAACCTCTTCTACTTGAAGGAGATTTGGAAATCAGCATCCTATCTAGAAA
ACCATCATTGATTTCACCCAGCAATTTAAAGCTTTTCAAGAAGGAAAATG
GTTAGGTGTAAGCCACAATTGCAAGCGTGTCGATAACAACTTTAGATTTG
GCCTCATTTAAGCTAGATTTTGTCTTTGACCATAAACAAGGAAAACACGA
ATCGTATAGAGTATCGAATGTCTTGCGTTCGTTGTTGTTCCCCTCTGGGT
GTCTTTTCAGCAAGGTATCAAGAAATCCCTGCATTTCCGCAGAATGTTTC
GTCTTTCGTAACAAGTGgtcttctctttttttctctgaTTCTGCCTTCGA
TCTTATTGGTCAGTTCAAAATATTCGAGTTCTTTCAGTCATGAAGCCGCG
GGTGGTCTAATGATTTTGCATTTAACTAGTGTTGCAAGTTCGTTTAAACG
GGATGAAAACAGTTCATTAAAAAACAGTGTAGTTTGTCTTCTGGCAACTC
AAATCCCTGAAAGAATTTCTCAACATCAGGGACAAATTAAGCAGCGTTGA
AATCAGTTTCCATTCGGATGTGTTTGTATCGTGGCTCGAAACGAGGTTTG
TGGACGTCGAAAATAACATACGGACCGTCGTGATCACTGATTTCGTCACA
CGGAAGAACGTTTTCATGGTTCATTTGTGGAAGGTTTGATGCGATATGAT
ATATCAGCGTACGGCCATGCCTGGTAGGTTTGGAGACACTCTAGGCCATG
GTAGATTACCCTTAACGCAAATGCATTTCCTATCATCGCTATTTTTGTTT
AATTCGCAAAATacattagcgaggttaagcatgAAGCTATTAATGACGTA
CAGAATCTACGACGTAGGTTTTTAGACTGGATCTGAGGCGTTTTAgccta
atttctaaagcttataAACCAAAAATTAGTCTATAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019080-exon-sc0000317-1491911889:331561..332846 | TCONS_00019080-exon-sc0000317-1491911889:331561..332846 | Clytia hemisphaerica | exon |
| TCONS_00019080-exon-sc0000317-1510915933:331561..332846 | TCONS_00019080-exon-sc0000317-1510915933:331561..332846 | Clytia hemisphaerica | exon |
| TCONS_00019080-exon-sc0000317-1575043694:331561..332846 | TCONS_00019080-exon-sc0000317-1575043694:331561..332846 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000317 | supercontig | sc0000317:331561..332846 . |
Blast
The following BLAST results are available for this feature:
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