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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019175 ID=TCONS_00019175|Name=TCONS_00019175|organism=Clytia hemisphaerica|type=transcript|length=6204bp
tttttttttcgacgtctgtactcggcaatttcgtGACCTCTACAGAATCG
ACGATTTTGCCTGAGGGGAACAGCAGTGGTGATGGAATTGGATTATTTCA
GTTaagccatccaggatcctgccattctatcagccagcaaaaactaaatg
acacttgtaaacttataTTTCTTAGtaccattttccatcaaaagcaatca
aaaacattacttcccaaagccggagagaCTAGAGTCAAGTAAGTCATCAG
TGGCAGTGCACGAACCGACGAACGaccccagtgcacgaacgaacgtcttt
gaacttgaaaaaaacaaccaaaaacaaacttctatagaacttgacttcct
ttgtgcagcagaatcctcaaattatcccttgcaatctctccaaaaaATAG
AATAAACGGAGCACTTAGAACAACACCAAACCGATTTTGAACAAGGCCAA
GTAAAAATTACACGAAATTCAGTAATGTTTTTTTATTGCGGTCGCATACA
GGAACTTGTCAGATGTTCCTAACTGTATTTGGTTTACTGTAAGATCCACT
TTCTGAATCTGATGCGGGCGAGTtgtcattattcattattttacaAACAA
CACACACCAAAttttataccgtcaactgctctaacttgggacaattgatt
gaaacatgggactgttgatatatggcttgtattttcacttactgttaaat
ctctttaacaacaaatttgttttgatagctCCACCAAGTTTATGTGTTAG
TCACACTACGAAACCAATGTTTCAGAAAAAGTcgcatcagtcatctacag
ctAACCtgcctctgaaggcacttgaaaattatacatctggaggaaaatag
tcctcctgcggaaaattttacaacaagaatcttgttgtgcgccagaaagt
caaaaaccaATACGGcaccctattcataaacacaatcatgcaactttgtt
gtcatcgccagtccttttagacgaacctggtccttacgatttcgagatta
catattcgtcagattgtatgttttcacccatcccttagAGCTTCAgtgtg
gtgggcagaaaacaaccacaatctgatctcaggttatctACAGGATGATG
TACCTTAAGTTGATTAATTTATTTGAGGCTTATATTTTGCAAGTTTTGCA
TAGTTTTGCAAAATTCTTAGAATTTAATGCTTGAAAAGATTAAAAAacgg
atttgaaaataaacgtAATAAAAGCCCTAAATTGAGTATGCAGTGTACCA
TTGTAATAAACCAAAATGAAATGCGCTCAGGGAATAAAAAGAGTAACAAA
TGTGATGAAGTAAAACAGCTTTTTTCTCAACATTAAAGTTGTGCTAGATA
AAAAGACAAATGGAACTAAAcaaagtttaaatttttaaagGGGGAGAAAC
CCTGGGTAAGTGTTTGTCTAGAAAGGGGGTAGGGACAGTAATACATGTTG
AGTTTGCAAAAGTCATTCTAATCATTTATCTTTTTATTATTCTTATTAAA
TTTTTCGAATTGGACTGTTATTGTGTCTTTATTGATTCTTTCTTGtaaat
gtttattttatatCTTTCTTAATAGATATAAATTAAGTTTCTACAAAAGC
TTACTGACTGAAGAATTTAACGGTTACTCTTTCTCTAATCAGTTCGTTTg
caaataataaagaaaataatgCAATCGTATCTCATTTGGTCagccttttt
ggtattttcactGAACTCAATGAGATGCCAAATGCCCAAGAAGCCTCCAA
TTTTGCCTTTGGTGAAAGATATTCCATTTATTCAATGTGATGTCTGCCAA
AAAGCAGCAAAAACTTTATTCAAGAGTGTCAAAGCAAAAAGAGAACAGAT
TAAACCAATGAagCTTGGAGAAGACGATATTCTAACTATTGTTGAAGGTA
CTTGTGATCCTGATTCAACTTATGGAGAATGGATAAGGCATTATGATATC
GTGGAGAAAGAAGACTCTTTGAAGCTTCAAGAACATTCTGTAAAAGGAAA
GTGTAGAGAGGAATGTAAAACTATTGCAAAGTCATGTGAGCAGTCTATTG
GAGATATTGACACTGATGTTAGCGAAATTCTTTGGAAAGATGAATTGAAG
CTTTCTAAATTCTTGAATAAAGTTTGCTATGACATGTCAAAGAGTTGCAA
AAAGAAGAAGCCAAAATATATTGCAGGAAAACGTAAGGATTATAAATTCA
AAGAAATGACAGAGAAAGATGAGGCTGCAGAAGAAATGATGAAGAACATG
AAGGGTATGCCAGGAATGCCTGGTTTGAGTATGTATGATCCTGAAGATTT
ACAGAATATGCGAGATGAGATGGGTATTGATGACAAAACAGTTGAAGAAT
ACAGAAAAAAACATGGTAAAGCTGGTGAAAGTGAACAAGAGTCTGCAACA
AGTCAACAAAATAGCCAGAAGGAAGCAGAGCCAGCAAAAAGTAACTTAGG
TCTCATGGATACTGTCAAAGCAGCAGGGCAAGATGTTTATGGGAAAGTGA
AAGGTATGTTTGGATCTGATGATACCAAAACtgaattgtaatttcattga
tGGTACTTCATTTAGTGTATTTTTAAGATGATTTGATACTGAAGTTCAGT
TTATAGACAccttttaaaagtaatttttttaaattattttaagaatatat
ttaaatttttattttttcaaatttttattgaaatgtcattttttaaatca
gtttGTTTGCTCAAACTTTAGCACTGTCATTCACAAAATGGATCCAAATA
CTAAAGTTTCTTTCCTGCAAAATCAACTCATAGTCTAATGCCTTGGAATA
AAAAGTCCTTTTAAACTTTCATGATCTCTTtatttgggccaaaaatttct
tccaaaacAACCTATTTATATGATATTTTATGATGCTGTTTCTCAATACT
TTAGGCCTACAAACTTTCGGGAGCATAAACTTTTGTGAATTGTtggataa
aaattaaaattgccttaaaagtgaaaaatattccttaaatccgATTAAGA
CGTTGCTTATTGACttttaaaaaggcattaaaggaTAGAAATACACCAAT
TAcaacaaatttgatatttattacgattttgaggttttatagatttcgaa
attttttgagaatttttcgcaaacaaaaactttcgcgaattgccctgtca
agaattttcaaagacatttactttcgcgaaaaaggccaaaattttataaa
ttgatTAGATTTACACATTTTGACACTTTATATTCATCTGTAGTTATAAT
TTGATGTTCAGATTTAATGTTCAAAATCGACTTGgttgatgaaatatttt
gtaatgggataaatttttggTATTGATTTAGGATTCACGGTAAAATTTTG
AGTACTAGAATTTATTTATTGGAATGTGGACAAAATTTgactagttttat
ttataaaaatatttgaaaagtttaGGATTGTAAAGCACATTTTACGAATA
AATATTATGAAGAATTGTGTTGTATTGATGTAATGAATTGTGTCTAGTTG
AAGAAGATCTTTCATTGACCCGGTTAATTCAAAATccttacttttattta
tttctagtgaTTGATAAATGGCTGCAGAAATAAACAAATCTTTTGATGCA
GAGGCTTTTGCCTCTACAACTTTAAAATATATAAAGGAAAGAAACAAAGT
TGAGTTGATTGGAATAGTACGAGATGTGAATGACTACAATAAAAATTCTT
CAGTCATGTTACAAAAGCTTACTGaatattgttttaaagagatTGTGAAA
TGTTTGAACCAAGAAGAGAATGATCCTTCAATGGAGTATTTGATGTGGAG
CCTGTTGACAGCAGTGAGCTCTATTCAAGTTGCACGCAAATTGATGTGGA
AAGAATCTACCATCCTACCTGTGCTTTATTTGTCCTTGAAACTTGCTAAT
GAAtcgaaaaatcgcaaattacagAAAGTTACGACTTCCCTACTTTCCAC
ACTTTTGATTGGAGCTGGTCTATCATATTTTGATGTGATCGCAGAGTTGG
GCTTTATTAAGCTTTTGAATGATATAATATCAGGTAATGAATTTCACGAA
GATATGTTCAAGTCAGTGATTTGTTGTTTGAGTTTGTTATGTGATGGCTC
GCTTGCGTGTAAAAAGCAACTGAATGATCTCAAAGTTGCAGATTCTATGT
TGAAAATGGGGGAAATACATCCTCTTCATGATGAAGACCTCCTTAACCTG
GCTGCAATGACTTATGATGATTTGTCTGCATTGAAAATGAGTCATTCCAT
TGGACGAAACAAGTTTTTGAAATCACAAGTTAGTGATCGAGTTGTTTGCT
CCAATTCCAAATGTTTAAAACCACAAAGTGATGTCAAGTTTAAAAAGTGT
TCACGTTGTAAAGTCACTCTTTATTGTTCTAAAGAATGTCAAGTAGTCCA
TTGGAAGCAAGGTGGTCATCATAAACAATGTCAACAACCTATTGTTTCGC
AGTGATAGTGACTATTATACATTTTCGTATTTTAATATTGTTTTTGCTCC
CAAATTAAATTATTTAATTGTTATTCCTCCTGTACATGCatccaaatatt
ttttatcatatatttttttatttataacaaaattcttttttctatcTTGT
ATCATATTTTATGAATTACAATTTTCtatataatgttttttttatttcca
ataccatttattgaaaaattctaCATTGTGTTATCATTGATTTCGGAATT
TAATTACTTGTTCGGACAGTTCAATCTATACTATTTCATctatctttttt
taagaaaaccgTAGACATAAGTATTGGATTTATTTAAAGAataatgattt
ttcaattttcatccgTTTCGTATATTTTCAGTGAaaaaccaatttgaaat
ataaaaaaattcatttgaaatatGGCATCAAGATCTGGTCCACGAGCACC
TGGTACAGATGGCTCTGATTATTCCCACCGGGAAAAAGTTGTCGACCACT
ACAAGCAGAGTGCTGATTTGAAAACAAGTGTCAGCAAGTGTTTACTACCT
CATATGACACTTACTTTTCTGGTAGCACTGAAGTTTGTTGCTGTCATCTT
GGGCTCTCAATACTTCCATCCCTTGGAACAGTGGGAAATGATTTGGCTGT
GTAGTGGTGTCACTGCCTATATTGGTTTTGGTGCACTTTCCAAGAATGAT
GTCAGCCGGTTGTCAGTTTATTTGtttggaaatttaatttttggtaTTGC
ACCATTAATTTATGGTTGTGTGGGTGTGGTCAAGAAAATGCAGCATGATT
TCAAAGATATGAAGAATATGCCAGAGGCCTGGAAAGCATCTCCTATGCGG
CTATCCTTGATTGCTGTTTGCCTGACCTGGCAATTGACCGGTATTGTCCA
ATCTATCAGATTGATTAAGGTTTGGAGATCAATGGCTactaaaaaaggaa
aataattctTAGCCACTTAAATAGAATAGGAGTTTCAATCGCAATAATTT
TTGTAGACACACTGTAATTTTCAGCaagattttaaaacaaaaaactagat
ttttcgtttttttagtAGCTGCATTTTTATCACGTAGAATTTTTATCTTA
CAATTTATAGATTTGTGAGCAATGAAGTAAAAACCCGAAGGTCTAGAAGC
GAATTTTTAatctttctcaggcaagaaaaagtgaagccttaaaatatgtg
CTGTATtgttgacgacggattgaatctagcgattcctttgttttcgagtg
atattttttcgaaatttagtggtaaattttattttcaatctggCATTTGT
CTAAAAATAAAGTGGGTCGCCCTAGGCTGCACAATTTTGGTAGGATttat
tggcttcaaatcctgCCAAGGAGATCCGCTTCCAGCCCTTctggcttata
cttcattggttttgAGTGAGTATTCTGAAAGTCATAGTATTTTGTGTGTT
tgttttaatttactttttagTCATTTAAAGGTTAAATTCTCATAAAATAA
ATGTAGGTGCGTTTTTAACGCCAAGTCAATTTTAGGGAATATTCTAGGGT
TATTTataattgaattttaatttcaaatcttttggttttctTAAAGACAA
GGAAGAAATTACAGCTCCCCGTTGTCATATTTTGTCTACTTGCAAACTTT
TAGACAATTATTCATTCCTGACATGCGCAGTGTTGTTGTTGTATTTCCAA
GCCGTGAATGAAATTTTGCTATTTCTACTTTTCTTAGTACCATGTTGCCG
CGAG Run BLAST on NCBI protein sequence of TCONS_00019175-protein >TCONS_00019175-protein ID=TCONS_00019175-protein|Name=TCONS_00019175-protein|organism=Clytia hemisphaerica|type=polypeptide|length=295bp
MAAEINKSFDAEAFASTTLKYIKERNKVELIGIVRDVNDYNKNSSVMLQK
LTEYCFKEIVKCLNQEENDPSMEYLMWSLLTAVSSIQVARKLMWKESTIL
PVLYLSLKLANESKNRKLQKVTTSLLSTLLIGAGLSYFDVIAELGFIKLL
NDIISGNEFHEDMFKSVICCLSLLCDGSLACKKQLNDLKVADSMLKMGEI
HPLHDEDLLNLAAMTYDDLSALKMSHSIGRNKFLKSQVSDRVVCSNSKCL
KPQSDVKFKKCSRCKVTLYCSKECQVVHWKQGGHHKQCQQPIVSQ Run BLAST on NCBI transcript from alignment at sc0000320:77140..84056- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019175 ID=TCONS_00019175|Name=TCONS_00019175|organism=Clytia hemisphaerica|type=transcript|length=6917bp|location=Sequence derived from alignment at sc0000320:77140..84056- (Clytia hemisphaerica)
TTTTTTTTTCGACGTCTGTACTCGGCAATTTCGTGACCTCTACAGAATCG
ACGATTTTGCCTGAGGGGAACAGCAGTGGTGATGGAATTGGATTATTTCA
GTTAAGCCATCCAGGATCCTGCCATTCTATCAGCCAGCAAAAACTAAATG
ACACTTGTAAACTTATATTTCTTAGTACCATTTTCCATCAAAAGCAATCA
AAAACATTACTTCCCAAAGCCGGAGAGACTAGAGTCAAGTAAGTCATCAG
TGGCAGTGCACGAACCGACGAACGACCCCAGTGCACGAACGAACGTCTTT
GAACTTGAAAAAAACAACCAAAAACAAACTTCTATAGAACTTGACTTCCT
TTGTGCAGCAGAATCCTCAAATTATCCCTTGCAATCTCTCCAAAAAATAG
AATAAACGGAGCACTTAGAACAACACCAAACCGATTTTGAACAAGGCCAA
GTAAAAATTACACGAAATTCAGTAATGTTTTTTTATTGCGGTCGCATACA
GGAACTTGTCAGATGTTCCTAACTGTATTTGGTTTACTGTAAGATCCACT
TTCTGAATCTGATGCGGGCGAGTTGTCATTATTCATTATTTTACAAACAA
CACACACCAAATTTTATACCGTCAACTGCTCTAACTTGGGACAATTGATT
GAAACATGGGACTGTTGATATATGGCTTGTATTTTCACTTACTGTTAAAT
CTCTTTAACAACAAATTTGTTTTGATAGCTCCACCAAGTTTATGTGTTAG
TCACACTACGAAACCAATGTTTCAGAAAAAGTCGCATCAGTCATCTACAG
CTAACCTGCCTCTGAAGGCACTTGAAAATTATACATCTGGAGGAAAATAG
TCCTCCTGCGGAAAATTTTACAACAAGAATCTTGTTGTGCGCCAGAAAGT
CAAAAACCAATACGGCACCCTATTCATAAACACAATCATGCAACTTTGTT
GTCATCGCCAGTCCTTTTAGACGAACCTGGTCCTTACGATTTCGAGATTA
CATATTCGTCAGATTGTATGTTTTCACCCATCCCTTAGAGCTTCAGTGTG
GTGGGCAGAAAACAACCACAATCTGATCTCAGGTTATCTACAGGATGATG
TACCTTAAGTTGATTAATTTATTTGAGGCTTATATTTTGCAAGTTTTGCA
TAGTTTTGCAAAATTCTTAGAATTTAATGCTTGAAAAGATTAAAAAACGG
ATTTGAAAATAAACGTAATAAAAGCCCTAAATTGAGTATGCAGTGTACCA
TTGTAATAAACCAAAATGAAATGCGCTCAGGGAATAAAAAGAGTAACAAA
TGTGATGAAGTAAAACAGCTTTTTTCTCAACATTAAAGTTGTGCTAGATA
AAAAGACAAATGGAACTAAACAAAGTTTAAATTTTTAAAGGGGGAGAAAC
CCTGGGTAAGTGTTTGTCTAGAAAGGGGGTAGGGACAGTAATACATGTTG
AGTTTGCAAAAGTCATTCTAATCATTTATCTTTTTATTATTCTTATTAAA
TTTTTCGAATTGGACTGTTATTGTGTCTTTATTGATTCTTTCTTGTAAAT
GTTTATTTTATATCTTTCTTAATAGATATAAATTAAGTTTCTACAAAAGC
TTACTGACTGAAGAATTTAACGGTTACTCTTTCTCTAATCAGTTCGTTTG
CAAATAATAAAGAAAATAATGCAATCGTATCTCATTTGGTCAGCCTTTTT
GGTATTTTCACTGAACTCAATGAGATGCCAAATGCCCAAGAAGCCTCCAA
TTTTGCCTTTGGTGAAAGATATTCCATTTATTCAATGTGATGTCTGCCAA
AAAGCAGCAAAAACTTTATTCAAGAGTGTCAAAGCAAAAAGAGAACAGAT
TAAACCAATGAAGGTAAAAATATATTTTGTCTTTTAAATCTATTCATTCC
ATTAATTTCATTGACTTACTATTCTTAGAGGAATTTAAGTATATAGCATT
CTCAGCATGTAATTAACACTATCACACATGATTGAAAATGTTCCTTGCCA
TTGTTTTCTCATTATCTAAAGAATGGGTTTTTTATTACATTTTTTAGTTA
ATTTGTGTCATCCATTACACTTTGTCTCAAAACCCTTTCTGATCAGCAAT
AATTAAGTGGGTAAGTAGCAAATAACACTAGGCAATATGGTTCATTTACT
TTTTTTAACACTAGCTTGGAGAAGACGATATTCTAACTATTGTTGAAGGT
ACTTGTGATCCTGATTCAACTTATGGAGAATGGATAAGGCATTATGATAT
CGTGGAGAAAGAAGACTCTTTGAAGCTTCAAGAACATTCTGTAAAAGGAA
AGTGTAGAGAGGAATGTAAAACTATTGCAAAGTCATGTGAGCAGTCTATT
GGAGATATTGACACTGATGTTAGCGAAATTCTTTGGAAAGATGAATTGAA
GCTTTCTAAATTCTTGAATAAAGTTTGCTATGACATGTCAAAGAGTTGCA
AAAAGAAGAAGCCAAAATATATTGCAGGAAAACGTAAGGATTATAAATTC
AAAGAAATGACAGAGAAAGATGAGGCTGCAGAAGAAATGATGAAGAACAT
GAAGTAAGTTTTTTAACATTTTACTTGTCAATGACAACGATTATTCAGGG
CCCACGTGGGGGGGGGAGGGCATGCCCTACACTTTTTTTGCAAAGTAAAA
ATGTTAGGTTGCCCCTCCTTATATTCATGTCCCCACTTTCAATTTCATAG
CGTGGGCCCTGATATTGGAATATTTTACATTCTCAACAGTGTTTCAAGAA
GATAGAAAGGCATCACAGGATTTTTTTTCAGGATTTGAAACTAGTTAGTT
ACAAACTCAAGAAAAAAGTTTTTCAAATGACTTCCTCACAAAGCTTCCCT
CTTTTAGAAGGTGATGAGTCCAAGCTAAAACTAATATGTCAAATGAAAAT
GAAAGTTTTTTTGTATTGATTGACTTTGGTGAATTCAAGCTAATCATAAA
TTTGAATTGTTTTAGGGGTATGCCAGGAATGCCTGGTTTGAGTATGTATG
ATCCTGAAGATTTACAGAATATGCGAGATGAGATGGGTATTGATGACAAA
ACAGTTGAAGAATACAGAAAAAAACATGGTAAAGCTGGTGAAAGTGAACA
AGAGTCTGCAACAAGTCAACAAAATAGCCAGAAGGAAGCAGAGCCAGCAA
AAAGTAACTTAGGTCTCATGGATACTGTCAAAGCAGCAGGGCAAGATGTT
TATGGGAAAGTGAAAGGTATGTTTGGATCTGATGATACCAAAACTGAATT
GTAATTTCATTGATGGTACTTCATTTAGTGTATTTTTAAGATGATTTGAT
ACTGAAGTTCAGTTTATAGACACCTTTTAAAAGTAATTTTTTTAAATTAT
TTTAAGAATATATTTAAATTTTTATTTTTTCAAATTTTTATTGAAATGTC
ATTTTTTAAATCAGTTTGTTTGCTCAAACTTTAGCACTGTCATTCACAAA
ATGGATCCAAATACTAAAGTTTCTTTCCTGCAAAATCAACTCATAGTCTA
ATGCCTTGGAATAAAAAGTCCTTTTAAACTTTCATGATCTCTTTATTTGG
GCCAAAAATTTCTTCCAAAACAACCTATTTATATGATATTTTATGATGCT
GTTTCTCAATACTTTAGGCCTACAAACTTTCGGGAGCATAAACTTTTGTG
AATTGTTGGATAAAAATTAAAATTGCCTTAAAAGTGAAAAATATTCCTTA
AATCCGATTAAGACGTTGCTTATTGACTTTTAAAAAGGCATTAAAGGATA
GAAATACACCAATTACAACAAATTTGATATTTATTACGATTTTGAGGTTT
TATAGATTTCGAAATTTTTTGAGAATTTTTCGCAAACAAAAACTTTCGCG
AATTGCCCTGTCAAGAATTTTCAAAGACATTTACTTTCGCGAAAAAGGCC
AAAATTTTATAAATTGATTAGATTTACACATTTTGACACTTTATATTCAT
CTGTAGTTATAATTTGATGTTCAGATTTAATGTTCAAAATCGACTTGGTT
GATGAAATATTTTGTAATGGGATAAATTTTTGGTATTGATTTAGGATTCA
CGGTAAAATTTTGAGTACTAGAATTTATTTATTGGAATGTGGACAAAATT
TGACTAGTTTTATTTATAAAAATATTTGAAAAGTTTAGGATTGTAAAGCA
CATTTTACGAATAAATATTATGAAGAATTGTGTTGTATTGATGTAATGAA
TTGTGTCTAGTTGAAGAAGATCTTTCATTGACCCGGTTAATTCAAAATCC
TTACTTTTATTTATTTCTAGTGATTGATAAATGGCTGCAGAAATAAACAA
ATCTTTTGATGCAGAGGCTTTTGCCTCTACAACTTTAAAATATATAAAGG
AAAGAAACAAAGTTGAGTTGATTGGAATAGTACGAGATGTGAATGACTAC
AATAAAAATTCTTCAGTCATGTTACAAAAGCTTACTGAATATTGTTTTAA
AGAGATTGTGAAATGTTTGAACCAAGAAGAGAATGATCCTTCAATGGAGT
ATTTGATGTGGAGCCTGTTGACAGCAGTGAGCTCTATTCAAGTTGCACGC
AAATTGATGTGGAAAGAATCTACCATCCTACCTGTGCTTTATTTGTCCTT
GAAACTTGCTAATGAATCGAAAAATCGCAAATTACAGAAAGTTACGACTT
CCCTACTTTCCACACTTTTGATTGGAGCTGGTCTATCATATTTTGATGTG
ATCGCAGAGTTGGGCTTTATTAAGCTTTTGAATGATATAATATCAGGTAA
TGAATTTCACGAAGATATGTTCAAGTCAGTGATTTGTTGTTTGAGTTTGT
TATGTGATGGCTCGCTTGCGTGTAAAAAGCAACTGAATGATCTCAAAGTT
GCAGATTCTATGTTGAAAATGGGGGAAATACATCCTCTTCATGATGAAGA
CCTCCTTAACCTGGCTGCAATGACTTATGATGATTTGTCTGCATTGAAAA
TGAGTCATTCCATTGGACGAAACAAGTTTTTGAAATCACAAGTTAGTGAT
CGAGTTGTTTGCTCCAATTCCAAATGTTTAAAACCACAAAGTGATGTCAA
GTTTAAAAAGTGTTCACGTTGTAAAGTCACTCTTTATTGTTCTAAAGAAT
GTCAAGTAGTCCATTGGAAGCAAGGTGGTCATCATAAACAATGTCAACAA
CCTATTGTTTCGCAGTGATAGTGACTATTATACATTTTCGTATTTTAATA
TTGTTTTTGCTCCCAAATTAAATTATTTAATTGTTATTCCTCCTGTACAT
GCATCCAAATATTTTTTATCATATATTTTTTTATTTATAACAAAATTCTT
TTTTCTATCTTGTATCATATTTTATGAATTACAATTTTCTATATAATGTT
TTTTTTATTTCCAATACCATTTATTGAAAAATTCTACATTGTGTTATCAT
TGATTTCGGAATTTAATTACTTGTTCGGACAGTTCAATCTATACTATTTC
ATCTATCTTTTTTTAAGAAAACCGTAGACATAAGTATTGGATTTATTTAA
AGAATAATGATTTTTCAATTTTCATCCGTTTCGTATATTTTCAGTGAAAA
ACCAATTTGAAATATAAAAAAATTCATTTGAAATATGGCATCAAGATCTG
GTCCACGAGCACCTGGTACAGATGGCTCTGATTATTCCCACCGGGAAAAA
GTTGTCGACCACTACAAGCAGAGTGCTGATTTGAAAACAAGTGTCAGCAA
GTGTTTACTACCTCATATGACACTTACTTTTCTGGTAGCACTGAAGTTTG
TTGCTGTCATCTTGGGCTCTCAATACTTCCATCCCTTGGAACAGTGGGAA
ATGATTTGGCTGTGTAGTGGTGTCACTGCCTATATTGGTTTTGGTGCACT
TTCCAAGAATGATGTCAGCCGGTTGTCAGTTTATTTGTTTGGAAATTTAA
TTTTTGGTATTGCACCATTAATTTATGGTTGTGTGGGTGTGGTCAAGAAA
ATGCAGCATGATTTCAAAGATATGAAGAATATGCCAGAGGCCTGGAAAGC
ATCTCCTATGCGGCTATCCTTGATTGCTGTTTGCCTGACCTGGCAATTGA
CCGGTATTGTCCAATCTATCAGATTGATTAAGGTTTGGAGATCAATGGCT
ACTAAAAAAGGAAAATAATTCTTAGCCACTTAAATAGAATAGGAGTTTCA
ATCGCAATAATTTTTGTAGACACACTGTAATTTTCAGCAAGATTTTAAAA
CAAAAAACTAGATTTTTCGTTTTTTTAGTAGCTGCATTTTTATCACGTAG
AATTTTTATCTTACAATTTATAGATTTGTGAGCAATGAAGTAAAAACCCG
AAGGTCTAGAAGCGAATTTTTAATCTTTCTCAGGCAAGAAAAAGTGAAGC
CTTAAAATATGTGCTGTATTGTTGACGACGGATTGAATCTAGCGATTCCT
TTGTTTTCGAGTGATATTTTTTCGAAATTTAGTGGTAAATTTTATTTTCA
ATCTGGCATTTGTCTAAAAATAAAGTGGGTCGCCCTAGGCTGCACAATTT
TGGTAGGATTTATTGGCTTCAAATCCTGCCAAGGAGATCCGCTTCCAGCC
CTTCTGGCTTATACTTCATTGGTTTTGAGTGAGTATTCTGAAAGTCATAG
TATTTTGTGTGTTTGTTTTAATTTACTTTTTAGTCATTTAAAGGTTAAAT
TCTCATAAAATAAATGTAGGTGCGTTTTTAACGCCAAGTCAATTTTAGGG
AATATTCTAGGGTTATTTATAATTGAATTTTAATTTCAAATCTTTTGGTT
TTCTTAAAGACAAGGAAGAAATTACAGCTCCCCGTTGTCATATTTTGTCT
ACTTGCAAACTTTTAGACAATTATTCATTCCTGACATGCGCAGTGTTGTT
GTTGTATTTCCAAGCCGTGAATGAAATTTTGCTATTTCTACTTTTCTTAG
TACCATGTTGCCGCGAG Coding sequence (CDS) from alignment at sc0000320:77140..84056- >TCONS_00019175 ID=TCONS_00019175|Name=TCONS_00019175|organism=Clytia hemisphaerica|type=CDS|length=888bp|location=Sequence derived from alignment at sc0000320:77140..84056- (Clytia hemisphaerica)
ATGGCTGCAGAAATAAACAAATCTTTTGATGCAGAGGCTTTTGCCTCTAC
AACTTTAAAATATATAAAGGAAAGAAACAAAGTTGAGTTGATTGGAATAG
TACGAGATGTGAATGACTACAATAAAAATTCTTCAGTCATGTTACAAAAG
CTTACTGAATATTGTTTTAAAGAGATTGTGAAATGTTTGAACCAAGAAGA
GAATGATCCTTCAATGGAGTATTTGATGTGGAGCCTGTTGACAGCAGTGA
GCTCTATTCAAGTTGCACGCAAATTGATGTGGAAAGAATCTACCATCCTA
CCTGTGCTTTATTTGTCCTTGAAACTTGCTAATGAATCGAAAAATCGCAA
ATTACAGAAAGTTACGACTTCCCTACTTTCCACACTTTTGATTGGAGCTG
GTCTATCATATTTTGATGTGATCGCAGAGTTGGGCTTTATTAAGCTTTTG
AATGATATAATATCAGGTAATGAATTTCACGAAGATATGTTCAAGTCAGT
GATTTGTTGTTTGAGTTTGTTATGTGATGGCTCGCTTGCGTGTAAAAAGC
AACTGAATGATCTCAAAGTTGCAGATTCTATGTTGAAAATGGGGGAAATA
CATCCTCTTCATGATGAAGACCTCCTTAACCTGGCTGCAATGACTTATGA
TGATTTGTCTGCATTGAAAATGAGTCATTCCATTGGACGAAACAAGTTTT
TGAAATCACAAGTTAGTGATCGAGTTGTTTGCTCCAATTCCAAATGTTTA
AAACCACAAAGTGATGTCAAGTTTAAAAAGTGTTCACGTTGTAAAGTCAC
TCTTTATTGTTCTAAAGAATGTCAAGTAGTCCATTGGAAGCAAGGTGGTC
ATCATAAACAATGTCAACAACCTATTGTTTCGCAGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019175-exon-sc0000320-1575043694:82194..84056 | TCONS_00019175-exon-sc0000320-1575043694:82194..84056 | Clytia hemisphaerica | exon |
| TCONS_00019175-exon-sc0000320-1575043694:81504..81892 | TCONS_00019175-exon-sc0000320-1575043694:81504..81892 | Clytia hemisphaerica | exon |
| TCONS_00019175-exon-sc0000320-1575043694:77140..81091 | TCONS_00019175-exon-sc0000320-1575043694:77140..81091 | Clytia hemisphaerica | exon |
| TCONS_00019175-exon-sc0000320-1510915933:82194..84056 | TCONS_00019175-exon-sc0000320-1510915933:82194..84056 | Clytia hemisphaerica | exon |
| TCONS_00019175-exon-sc0000320-1510915933:81504..81892 | TCONS_00019175-exon-sc0000320-1510915933:81504..81892 | Clytia hemisphaerica | exon |
| TCONS_00019175-exon-sc0000320-1510915933:77140..81091 | TCONS_00019175-exon-sc0000320-1510915933:77140..81091 | Clytia hemisphaerica | exon |
| TCONS_00019175-exon-sc0000320-1491911889:82194..84056 | TCONS_00019175-exon-sc0000320-1491911889:82194..84056 | Clytia hemisphaerica | exon |
| TCONS_00019175-exon-sc0000320-1491911889:81504..81892 | TCONS_00019175-exon-sc0000320-1491911889:81504..81892 | Clytia hemisphaerica | exon |
| TCONS_00019175-exon-sc0000320-1491911889:77140..81091 | TCONS_00019175-exon-sc0000320-1491911889:77140..81091 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000320 | supercontig | sc0000320:77140..84056 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005488 | binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005488 |
binding |
Blast
BLAST of TCONS_00019175 vs. Swiss-Prot (Human)
Match: JAGN1 (Protein jagunal homolog 1 OS=Homo sapiens GN=JAGN1 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.612e-18 Identity = 55/181 (30.39%), Postives = 93/181 (51.38%), Query Frame = 3
Query: 4872 MASRSGPRAPGTDGSDYSHREKVVDHYKQSADLKTSVSKCLLPHMTLTFLVALKF----VAVILGSQYFHPLEQWEMIWLCSGVTAYIGFGALSKNDVSRLSVYLFGNLIFGIAPLIYGCVGVVKKMQHDFKDMKNMPEAWKASPMRLSLIAVCLTWQLTG--IVQSIRLIKVWRSMATKK 5396
MASR+GPRA GTDGSD+ HRE+V HY+ S LK + K + H+ + L+ K + ++ Q P QWE +L S + + +G + +N++S L + + +F IAPLIYG + + Q ++ K + S + + + + L Q+ + S +L+ W + +K
Sbjct: 1 MASRAGPRAAGTDGSDFQHRERVAMHYQMSVTLKYEIKKLIYVHLVIWLLLVAKMSVGHLRLLSHDQVAMPY-QWEYPYLLSILPSLLGLLSFPRNNISYLVLSMISMGLFSIAPLIYGSMEMFPAAQQLYRHGKAYRFLFGFSAVSIMYLVLVLAVQVHAWQLYYSKKLLDSWFTSTQEK 180
The following BLAST results are available for this feature:
|
