TCONS_00019423 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019423
Unique NameTCONS_00019423
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length181

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019423 ID=TCONS_00019423|Name=TCONS_00019423|organism=Clytia hemisphaerica|type=transcript|length=181bp
AAAATTGGTTTTCAAATAAATGACATTAAACAAATTTGCCCTATACTCAG
ATCTTATGTAATTCTTTATTTcagtaatattttcaaactgCAAAAGTACT
GACGTACCAATTTCACCAGGAACTTGATGGCCCTTTACATCTCTACTATg
ggaatcaaaaacaaaatatttttcattgtaa
Run BLAST on NCBI

transcript from alignment at sc0000326:16693..16873

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019423 ID=TCONS_00019423|Name=TCONS_00019423|organism=Clytia hemisphaerica|type=transcript|length=181bp|location=Sequence derived from alignment at sc0000326:16693..16873 (Clytia hemisphaerica)
ttacaatgaaaaatattttgtttttgattcccATAGTAGAGATGTAAAGG
GCCATCAAGTTCCTGGTGAAATTGGTACGTCAGTACTTTTGcagtttgaa
aatattactgAAATAAAGAATTACATAAGATCTGAGTATAGGGCAAATTT
GTTTAATGTCATTTATTTGAAAACCAATTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010910XLOC_010910Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019423-exon-sc0000326-1491911889:16693..16873TCONS_00019423-exon-sc0000326-1491911889:16693..16873Clytia hemisphaericaexon
TCONS_00019423-exon-sc0000326-1510915933:16693..16873TCONS_00019423-exon-sc0000326-1510915933:16693..16873Clytia hemisphaericaexon
TCONS_00019423-exon-sc0000326-1575043694:16693..16873TCONS_00019423-exon-sc0000326-1575043694:16693..16873Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000326supercontigsc0000326:16693..16873 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00019423 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top