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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019607 ID=TCONS_00019607|Name=TCONS_00019607|organism=Clytia hemisphaerica|type=transcript|length=2513bp
GTCATTCAAATGAAGTGTTTAGTTTTGATGTTAATGAACTGTTAAAACCA
CCTTGCGAACTGACCAACTAACCGTCTTATGTCTCTTTCTGTCAACGAGT
TTTTTTACGGATATCTACCCCCTCTTTAATTTTCCTGGCAAACACAAAGA
GGTTCAATTGACCTTTCACGAAAGATTAAAGACATTCTTTTATCATTTAT
TGTTTTAGCGTCTGTCAGTCAATGTTTCGGAATTTCTTTTCACGGGAACG
TTAAAACTCTTCGAAAtccttctaaaaatattttttataacaaGAAACAA
CTGATGATgcgtcaaaataaaaaatttatacaACTGTTTATATGACTTTT
AATCCTTTGCATTACCTTCATCTTCTGGCTTCAACCATGAGCCAAACTGG
CGGACCACATTTTATTTTTCCACACTTTTTGTGAATTTATAGTTGCTTTA
TTAACTCTGGAACGTTTGTTCACCTCTTAGTTTGTTATTCATTTGATTTT
GTTCAATACACGGCATTTTGTAGGATGATTCACTGCGCCACATTTGATAT
CATCCTTCAAAATTCTTTATACATCCTCATAaggaaatttctcaattttc
atcatttccccATATTAAAGTCTCTCTTTGTTCATTTTCTGCATCAAAAC
TATCAGGCATCAAATCTATGAAGACACCGTTAGCTAAAGGCTGGTCAATA
TCAATAGAGTCTGTGTCTTGTCCGACTTCTGGGAGTGTCGACACTGTTAA
TGAAATATCGTGTTGTGTTTGCACCGTTGTCGATGGGTCTTTTTTACTGT
CTGTTGTTTGTTGCCGTTCAACTGTTGTCGATGGGTGCTCTGTGGTCAGC
GTCTCCTGTGTTGTATTACGGGCTTTTGGAATGGTGGTGTGCTCTTTATT
GGATGACGAGGTAGTGGAAGTGGTCGGGTTCGTAGTACTCATTAAAGGTA
TATCTGTTATTTGTTTTAAAGATTTAGGTATTTTAGTCGTCAAAAGCGTC
GTTGAAGATGTCGTTATTGTCGAAGTTGTTGTCGTGCTTGTTTTCATAGA
TGATGTTTTAGATTGGCGACTTGTTGATACTGTCGATGGCCGACTTGTTG
ATGTCGTCGGTAATTTCTTCGTTGTAgtagtggtcgttgttgttgtcgtt
GGTTTGAGTGTTGTTGGTCTGAGTGTTGTTGTCGTTGGCAATGTTGTCTG
CGTGGTAGTTGCTGTCACAGAAGCTGTGGACGGTTCAGCTGTTTTGACCG
TGGTTGATATCTTCTGTGATTTCTCACTTTCATACAATAAAGACATCAAC
ATATCTTTTAATCTGAAGGGAGCTTCTTTCTCCTCTGTTGATGCTCGTTT
TTGTAATGCGAATATTTGCTGCTGAAGCTCCTCGGCGTATCGTTGAAAAT
GGCGCATCGTTTCAGTGTTTTCAACGGACTTGTTGAAGATGCGATTTGCC
ATCCAATCATGTTTTTGTCTCAATTTATTGATCGACGCAGTCATATTGTT
ATAAACTTGTCGAATGCTAGACTTGAGCATTTGAAGCTCGCTACTGAGTC
TCTGGTTTTTGATAGTCTCGCGCCCAATCTTTTCCTCCAGATTCAGTATT
GAACGCTGTCCGTATAAATACTGTTGCTCTAAACGTTCGATGCGTTTCGT
CAAAAGGTTTTGGTTTTGATTGATCTTGTTCTGCAGACCCAAtttgaaat
cataaatcaaGCGACtattattttcagcttttgcttTCCAGTGTAATTTC
TCTTTCAATTCGCGTTGTTGGATCTCCTTGATTCGGTCAAGCTCATATCG
CAAATGGTTGAGGCGTTGGACGAGCTTGTTGTATATAACAGTATCATTTC
TGGATTTCCCATCCAGCGTATTGATTCGCTTCAGATAGTATTGGAGGTTC
TTCTTTATCGCTACAATCTCTTGGTGAATGCCGTCAAAGTTTTTCTCGAT
CTCCTTTGCGTTCAATCGGATACGACATTCAATAAAGTTCAATAAAATGG
TGAAAAGTATTAACGAAATAAACAACTTCATTGTGTTTGATTAAAAGTAC
GTTTATATAGTTCGACAATTATGTTTAGTTTCTGTTCAGAAGTGATGCCT
CAGATGGATTTTTCTATTGAATCAACATTTCATAAAAacgaaatattttc
aacttaagcgatctttgaaaaaaatgaaatcacttTCGATGCTGTTTAAC
AAGTGACTTACatcaaataataatttctttcTACTAATCGGTCGACACGG
CAAGTCGAACCTTCACGANCatcaaataataatttctttcTACTAATCGG
TCGACACGGCAAGTTGAACCTTCACGATCAAGCTTCATTTGAAAACTGAT
CTCAAGCCGCGACCTGAACGACTATTTTGTATGTTTTCAATAAACAACAG
ACTTGAAAGAAAGACTGACGTTGACAAAAcacaaaagtgatttttttctt
acattgtttttatgttgatttttctCCCTCCACGAGTTCGTTGACATCAT
tatgttgattttg Run BLAST on NCBI protein sequence of Putative cnidarian restricted secerted protein >TCONS_00019607-protein ID=TCONS_00019607-protein|Name=Putative cnidarian restricted secerted protein|organism=Clytia hemisphaerica|type=polypeptide|length=479bp
MKLFISLILFTILLNFIECRIRLNAKEIEKNFDGIHQEIVAIKKNLQYYL
KRINTLDGKSRNDTVIYNKLVQRLNHLRYELDRIKEIQQRELKEKLHWKA
KAENNSRLIYDFKLGLQNKINQNQNLLTKRIERLEQQYLYGQRSILNLEE
KIGRETIKNQRLSSELQMLKSSIRQVYNNMTASINKLRQKHDWMANRIFN
KSVENTETMRHFQRYAEELQQQIFALQKRASTEEKEAPFRLKDMLMSLLY
ESEKSQKISTTVKTAEPSTASVTATTTQTTLPTTTTLRPTTLKPTTTTTT
TTTTKKLPTTSTSRPSTVSTSRQSKTSSMKTSTTTTSTITTSSTTLLTTK
IPKSLKQITDIPLMSTTNPTTSTTSSSNKEHTTIPKARNTTQETLTTEHP
STTVERQQTTDSKKDPSTTVQTQHDISLTVSTLPEVGQDTDSIDIDQPLA
NGVFIDLMPDSFDAENEQRETLIWGNDEN Run BLAST on NCBI transcript from alignment at sc0000331:312202..314714 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019607 ID=TCONS_00019607|Name=TCONS_00019607|organism=Clytia hemisphaerica|type=transcript|length=2513bp|location=Sequence derived from alignment at sc0000331:312202..314714 (Clytia hemisphaerica)
caaaatcaacataATGATGTCAACGAACTCGTGGAGGGagaaaaatcaac
ataaaaacaatgtaagaaaaaaatcacttttgtgTTTTGTCAACGTCAGT
CTTTCTTTCAAGTCTGTTGTTTATTGAAAACATACAAAATAGTCGTTCAG
GTCGCGGCTTGAGATCAGTTTTCAAATGAAGCTTGATCGTGAAGGTTCAA
CTTGCCGTGTCGACCGATTAGTAgaaagaaattattatttgatGNTCGTG
AAGGTTCGACTTGCCGTGTCGACCGATTAGTAgaaagaaattattatttg
atGTAAGTCACTTGTTAAACAGCATCGAaagtgatttcatttttttcaaa
gatcgcttaagttgaaaatatttcgtTTTTATGAAATGTTGATTCAATAG
AAAAATCCATCTGAGGCATCACTTCTGAACAGAAACTAAACATAATTGTC
GAACTATATAAACGTACTTTTAATCAAACACAATGAAGTTGTTTATTTCG
TTAATACTTTTCACCATTTTATTGAACTTTATTGAATGTCGTATCCGATT
GAACGCAAAGGAGATCGAGAAAAACTTTGACGGCATTCACCAAGAGATTG
TAGCGATAAAGAAGAACCTCCAATACTATCTGAAGCGAATCAATACGCTG
GATGGGAAATCCAGAAATGATACTGTTATATACAACAAGCTCGTCCAACG
CCTCAACCATTTGCGATATGAGCTTGACCGAATCAAGGAGATCCAACAAC
GCGAATTGAAAGAGAAATTACACTGGAaagcaaaagctgaaaataataGT
CGCttgatttatgatttcaaaTTGGGTCTGCAGAACAAGATCAATCAAAA
CCAAAACCTTTTGACGAAACGCATCGAACGTTTAGAGCAACAGTATTTAT
ACGGACAGCGTTCAATACTGAATCTGGAGGAAAAGATTGGGCGCGAGACT
ATCAAAAACCAGAGACTCAGTAGCGAGCTTCAAATGCTCAAGTCTAGCAT
TCGACAAGTTTATAACAATATGACTGCGTCGATCAATAAATTGAGACAAA
AACATGATTGGATGGCAAATCGCATCTTCAACAAGTCCGTTGAAAACACT
GAAACGATGCGCCATTTTCAACGATACGCCGAGGAGCTTCAGCAGCAAAT
ATTCGCATTACAAAAACGAGCATCAACAGAGGAGAAAGAAGCTCCCTTCA
GATTAAAAGATATGTTGATGTCTTTATTGTATGAAAGTGAGAAATCACAG
AAGATATCAACCACGGTCAAAACAGCTGAACCGTCCACAGCTTCTGTGAC
AGCAACTACCACGCAGACAACATTGCCAACGACAACAACACTCAGACCAA
CAACACTCAAACCaacgacaacaacaacgaccactacTACAACGAAGAAA
TTACCGACGACATCAACAAGTCGGCCATCGACAGTATCAACAAGTCGCCA
ATCTAAAACATCATCTATGAAAACAAGCACGACAACAACTTCGACAATAA
CGACATCTTCAACGACGCTTTTGACGACTAAAATACCTAAATCTTTAAAA
CAAATAACAGATATACCTTTAATGAGTACTACGAACCCGACCACTTCCAC
TACCTCGTCATCCAATAAAGAGCACACCACCATTCCAAAAGCCCGTAATA
CAACACAGGAGACGCTGACCACAGAGCACCCATCGACAACAGTTGAACGG
CAACAAACAACAGACAGTAAAAAAGACCCATCGACAACGGTGCAAACACA
ACACGATATTTCATTAACAGTGTCGACACTCCCAGAAGTCGGACAAGACA
CAGACTCTATTGATATTGACCAGCCTTTAGCTAACGGTGTCTTCATAGAT
TTGATGCCTGATAGTTTTGATGCAGAAAATGAACAAAGAGAGACTTTAAT
ATggggaaatgatgaaaattgagaaatttcctTATGAGGATGTATAAAGA
ATTTTGAAGGATGATATCAAATGTGGCGCAGTGAATCATCCTACAAAATG
CCGTGTATTGAACAAAATCAAATGAATAACAAACTAAGAGGTGAACAAAC
GTTCCAGAGTTAATAAAGCAACTATAAATTCACAAAAAGTGTGGAAAAAT
AAAATGTGGTCCGCCAGTTTGGCTCATGGTTGAAGCCAGAAGATGAAGGT
AATGCAAAGGATTAAAAGTCATATAAACAGTtgtataaattttttatttt
gacgcATCATCAGTTGTTTCttgttataaaaaatatttttagaaggaTTT
CGAAGAGTTTTAACGTTCCCGTGAAAAGAAATTCCGAAACATTGACTGAC
AGACGCTAAAACAATAAATGATAAAAGAATGTCTTTAATCTTTCGTGAAA
GGTCAATTGAACCTCTTTGTGTTTGCCAGGAAAATTAAAGAGGGGGTAGA
TATCCGTAAAAAAACTCGTTGACAGAAAGAGACATAAGACGGTTAGTTGG
TCAGTTCGCAAGGTGGTTTTAACAGTTCATTAACATCAAAACTAAACACT
TCATTTGAATGAC Coding sequence (CDS) from alignment at sc0000331:312202..314714 >TCONS_00019607 ID=TCONS_00019607|Name=TCONS_00019607|organism=Clytia hemisphaerica|type=CDS|length=1440bp|location=Sequence derived from alignment at sc0000331:312202..314714 (Clytia hemisphaerica)
ATGAAGTTGTTTATTTCGTTAATACTTTTCACCATTTTATTGAACTTTAT
TGAATGTCGTATCCGATTGAACGCAAAGGAGATCGAGAAAAACTTTGACG
GCATTCACCAAGAGATTGTAGCGATAAAGAAGAACCTCCAATACTATCTG
AAGCGAATCAATACGCTGGATGGGAAATCCAGAAATGATACTGTTATATA
CAACAAGCTCGTCCAACGCCTCAACCATTTGCGATATGAGCTTGACCGAA
TCAAGGAGATCCAACAACGCGAATTGAAAGAGAAATTACACTGGAaagca
aaagctgaaaataataGTCGCttgatttatgatttcaaaTTGGGTCTGCA
GAACAAGATCAATCAAAACCAAAACCTTTTGACGAAACGCATCGAACGTT
TAGAGCAACAGTATTTATACGGACAGCGTTCAATACTGAATCTGGAGGAA
AAGATTGGGCGCGAGACTATCAAAAACCAGAGACTCAGTAGCGAGCTTCA
AATGCTCAAGTCTAGCATTCGACAAGTTTATAACAATATGACTGCGTCGA
TCAATAAATTGAGACAAAAACATGATTGGATGGCAAATCGCATCTTCAAC
AAGTCCGTTGAAAACACTGAAACGATGCGCCATTTTCAACGATACGCCGA
GGAGCTTCAGCAGCAAATATTCGCATTACAAAAACGAGCATCAACAGAGG
AGAAAGAAGCTCCCTTCAGATTAAAAGATATGTTGATGTCTTTATTGTAT
GAAAGTGAGAAATCACAGAAGATATCAACCACGGTCAAAACAGCTGAACC
GTCCACAGCTTCTGTGACAGCAACTACCACGCAGACAACATTGCCAACGA
CAACAACACTCAGACCAACAACACTCAAACCaacgacaacaacaacgacc
actacTACAACGAAGAAATTACCGACGACATCAACAAGTCGGCCATCGAC
AGTATCAACAAGTCGCCAATCTAAAACATCATCTATGAAAACAAGCACGA
CAACAACTTCGACAATAACGACATCTTCAACGACGCTTTTGACGACTAAA
ATACCTAAATCTTTAAAACAAATAACAGATATACCTTTAATGAGTACTAC
GAACCCGACCACTTCCACTACCTCGTCATCCAATAAAGAGCACACCACCA
TTCCAAAAGCCCGTAATACAACACAGGAGACGCTGACCACAGAGCACCCA
TCGACAACAGTTGAACGGCAACAAACAACAGACAGTAAAAAAGACCCATC
GACAACGGTGCAAACACAACACGATATTTCATTAACAGTGTCGACACTCC
CAGAAGTCGGACAAGACACAGACTCTATTGATATTGACCAGCCTTTAGCT
AACGGTGTCTTCATAGATTTGATGCCTGATAGTTTTGATGCAGAAAATGA
ACAAAGAGAGACTTTAATATggggaaatgatgaaaattga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019607-exon-sc0000331-1491911889:312202..314714 | TCONS_00019607-exon-sc0000331-1491911889:312202..314714 | Clytia hemisphaerica | exon |
| TCONS_00019607-exon-sc0000331-1510915933:312202..314714 | TCONS_00019607-exon-sc0000331-1510915933:312202..314714 | Clytia hemisphaerica | exon |
| TCONS_00019607-exon-sc0000331-1575043694:312202..314714 | TCONS_00019607-exon-sc0000331-1575043694:312202..314714 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000331 | supercontig | sc0000331:312202..314714 . |
Blast
The following BLAST results are available for this feature:
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