TCONS_00019622 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019622
Unique NameTCONS_00019622
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1013

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019622 ID=TCONS_00019622|Name=TCONS_00019622|organism=Clytia hemisphaerica|type=transcript|length=1013bp
ATAGATTGTTAGATAAAAAAAGATGTCAGTGCtagagaaaaaaggaaaag
gaaagtTGGATGATACTGTTGTATTGAAATGCAACATCACCGGTTTTGTA
AATATTGATGGACATACTGAATTCAAATTAAAAGTTCAAAGAGGATCAAA
TCCAGATAACAGTTGGGAGGTGATGCATCGATATAATGATTTTGCAGCAC
TGAATACACTACTCACGgCAAACCTTGTTGGTATTGAAGTTCCTTTCCCA
CCAAAGAAGGCATTTGGAAATATGGATAGTGCTTTCTTGCAAGAACGCAG
GTTTGGTTTGCAGACTTTCATGGATCTGGTCTTGTCAAACAGTTTGTTTT
CGCAAAATATTGCTGTAAAAAGATTTCTTGACCCTGGAAACTACTCAGAT
AACATTGATCAGATGGCACAACAACAAGCAGCCATGTTCTTTCGATCAGA
ACCAAATTGGGAACTACAGGAAAACATGAAAGAAATAGGTTGGAGGGTAC
GCAAACATTATTTTAGCATCAAATCCAAAGATGGGGCAGCAAAAACGAAA
TATTTACTCAGTTGGGTTGAACATGGACCAGATCTGACGTTGGACCACCA
GACCACATTATTAGGGCTTTTACATCAATTAGTTTCACTACAGCATCCAT
TCATTTATCCAGTCACTTACGCATCGTGCACAGAAAAAGGAGCAACTATA
GTTCGACAATTTCATAATACTGGCTCTTTGAGAGATGTTATATGCAAGGC
AAAACCACATCATCCCAGACTGAAGAAATATGGAAATTTGAGAATTCGAA
TACCTTTGGAATTCAGTAATATCAAGCGAATTGGTCGGCAAGTTCTAGAA
GCactcaaatttttaaaagacaAAAATTGGCCTTATGgtCATTTGCATGC
TGGAAATGTTGTAGTTGATGGAAATAATTGCAGATTGCTGGATGTAGAAA
ATGGAATACTGGGCCTGCCCACACTTTATCGATCTTTTATTATGGAGCTC
AAAGCTGTCAAGG
Run BLAST on NCBI

transcript from alignment at sc0000332:8327..17510-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019622 ID=TCONS_00019622|Name=TCONS_00019622|organism=Clytia hemisphaerica|type=transcript|length=9184bp|location=Sequence derived from alignment at sc0000332:8327..17510- (Clytia hemisphaerica)
ATAGATTGTTAGATAAAAAAAGATGTCAGTGCTAGAGAAAAAAGGAAAAG GAAAGTTGGATGATACTGTTGTATTGAAATGCAACATCACCGGTTTTGTA AATATTGATGGACATACTGTAAGTATACAATTTTCTCATAATTAATGTGG CGGCATTTTTTTATATTTGTATGAAGTGTATCCAAATGTATTAATAGCAT AGTAACTTATTTATGCTTTTGAATTTGAAATACAAAAATGAATTTCCTGC ATCTAATAATCCAATCACTAATACTATATGTATTTTTTAGGAATTCAAAT TAAAAGTTCAAAGAGGATCAAATCCAGATAACAGTTGGGAGGTGAGCGAG CCTTTGGTTGATATACTTGTCTTTCTAGATGCTTTGACCTTATTTTCGTT GATCTCCTCAGATTGAGTGCAAGCACCATTAACAAAGGACTAGGAAAAGA TTCGTTATTGACTTTTTAAAACGAAGAATAGAGAATTTATTTTCCTCTTT TAGGTGATGCATCGATATAATGATTTTGCAGCACTGAATACACTACTCAC GGTAAAGATTGTTTCAAATATGCTCCTTCCTTAAAATGATAATGTAATAT CCACCTTTTCATAAATTACATCACAAAAAATCATTTGCCTCATATTGAAA CAATTACCATGGTGATTATGTCCCTTGAGACATTAAATGATTTTTTTATG AATAAAAAGTAGTTTCAACACAATCCACTGGGAGTTGATCACCATGGCAA TAATTTCAAAACAAGGCAAGTGATGTTTGTGACGTATTTTATGAAAAGAT CTATCATGATTTATACAAAATATTTGTATGAAATGACAAAATGAGCTGAC AGAGCTGTACTTTCTTAAATGTTTTTCTTTTGTCAGGCAAACCTTGTTGG TATTGAAGTTCCTTTCCCACCAAAGAAGGCATTTGGAAATATGGATAGTG CTTTCTTGCAAGAACGCAGGTTTGGTTTGCAGGTTAGAGGCAGATCTTTT TATTTCTGTCTGCTCAAGATAACTACAAATTATTGATTAATAAAACTTGC TTTGAGAGCAATGTAGTGTATTTGATGTCAATTTTGCGGGCATAAATGAA AGCTGAATAATGTCAATTTTTAGTTTTGAGAAGTCAAAATAACATTCACT GTAGGTTTTAATCCATCCCTTTTTGAACATTTGAGTTAAAAACTTTGCAA AAACTGCTCTGTTGATCTGAATTATGAAAATTCTAGATTTTTGTTTGTAA AAGATAAAATACGTTGATAAGAAAATGGTATTACTGTATTATAGGTAAGT TTAAAAAAGATTTAGCATCTAGAATGATTGCTTTTATAAATATTCAAACA CATTGATACATTCTATGACTCGTCATTGTGCAAAAATAATAAATCTTTTT ATTTAGACTTTCATGGATCTGGTCTTGTCAAACAGTTTGTTTTCGCAAAA TATTGCTGTAAAAAGATTTCTTGACCCTGGAAACTACTCAGATAACATTG ATCGTAAGTCAAATTTGTTTCCAGTAGATATATCCACATCTTCCAATTTA TGTTGAACTGTNCTCATTTGAATTAGGGCTGTAGGTTTATTGGACCATTT ATAGCCTACCATTATCAACCAAATATTTTAAAATATCCACAAGTTTTGAA GAGCCGGCCATCTGAAATATATTCATAACATTAAATTTATTCTAATGATA ATAGATTGCTAGATAAAAAAGATGTCAGTGCTAGAGAAAAAAGGAAAAGG AAAGTTGGATGATACTGTTGTATTGAAATGCAACATCACCGGTTTTGTGA ATATTGATGGACATACTGTAAGTATACAATTTTCTCATAATTAATGTGGC GGCATTTTTTTATATTTGTATGAAGTGTATCCAAATGTATTAATAGCATA GTAACTTATTTATGCTTTTGAATTTGAAATACAAAAATGAATTTCCTGCA TCTAATAATCCAATCACTAATACTATATGTATTTTTTAGGAATTCAAATT AAAAGTTCAAAGAGGATCAAATCCAGATAACAGTTGGGAGGTGAGCGAGC CTTTGGTTGATATACTTGTCTTTCTAGATGCTTTGACCTTATTTTCGTTG ATCTCCTCAGATTGAGTGCAAGCACCATTAACAAAGGACTAGGAAAAGAT TCGTTATTGACTTTTTAAAACGAAGAATAGAGAATTTATTTTCCTCTTTT AGGTGATGCATCGATATAATGATTTTGCAGCACTGAATACACTACTCACG GTAAAGATTGTTTCAAATATGCTCCTTCCTTATAAAACGATAATGTAATA GACCTTTTCATAAATTACATCACAAAAAATCATTTGCCTCATATTGAAAC AGTTACCATGGTGATTATGTCCCTTGAGACATTAATTGATTTTTTTATGA ATAAAAAGTAGTTTCAACACAATCCACTGGGAGTTGATCACCATGGCAAT AATTTCAAAACAAGGCAAGTGATGTTTGTGACGTATTTTATGAAAAGATC TATCATGATTTATACAAAATATTTGTATGAAATGACAAAATGAGCTGACA GATCTGTACTTTCTTAAATGTTTTTCTTTTGTCAGGCAAACCTTGTTGGT ATTGAAGTTCCTTTCCCACCAAAGAAGGCATTTGGAAATATGGATAGTGC TTTCTTGCAAGAACGCAGGTTTGGTTTGCAGGTTAGAGGCAGATCTTTTT ATTTCTGTCTGCTCAAGATAACTACAAATTATTGATTAATAAAACTTGCT TTGAGAGCAATGTAGTGTATTTGATGTCAATTTTGCGGGCATAAATGAAA GCTGAATAATGTCAATTTTTAGTTTTGAGAAGTCAAAATAACATTCACTG TAGGTTTTAATCCATCCCTTTTTGAACATTTGAGTTAAAAACTTTGCAAA AACTGCTCTGTTGATCTGAATTATGAAAATTCTAGATTTTTGTTTGTAAA AGATAAAATACGTTGATAAGAAAATGGTATTACTGTATTATAGGTAAGTT CAAAAAAGATTTAGCATCTAGAATGATTGCTTTTATAAATATTCAAACAC ATTGATACATTCTATGACTCGTCATTGTGCAAAAATAATAAATCTTTTTA TTTAGACTTTCATGGATCTGGTCTTGTCAAACAGTTTGTTTTCGCAAAAT ATTGCTGTAAAAAGATTTCTTGACCCTGGAAACTACTCAGATAACATTGA TCGTAAGTCAAATTTGTTTCCAGTAGATATATCCACATCTTCCAATTTAT GTTGAACTGTGAAAAAGAATGCTGCTTTTATTATTTGATATTTTCGACAT GTTTCAGGCTTGTTCCATTCTCACACCCCTGTCTCACAGCCCCGGTGGAA CTTTTTTCTAAGTGGGGATAAAATTCCTATTGAAATCCCAATGGGGATAG AAATTCCTTTGTTTCAAGGTTAAAAAATTCAGTGGCAATGGTTTTGAAGT GCAATTTTTAAACATTGAATTTCGAATGGGGATGAAATAAAAGTTAATTT CCAATTGGGGCTAAAATTCTAAGGTATTTTCCCACTGAGGACGAAACCTT TCTCAATCTTTCCAGTGGGGCTGGGCTGCCAGCAGGTCTGTGACACAGGG GTATATTCTCAAGAATTTGAGTTCCGTTCTCATATGATATTATCTTTTTG ACCAGGTTTTTTCCGTTGGTGGTGGTAGTGTATGCTAAAATTTTGATCTA ATATAGACATGCTTTTGTTTCTCAATAGAGATGGCACAACAACAAGCAGC CATGTTCTTTCGATCAGAACCAAATTGGGAACTACAGGAAAACATGAAAG AAATAGGTATGCCTTTTAAGTATACGATAAGAGCTGTTGCTAGGTAGCTA AGTGGGTTGTGTGTCCCTTCCTTGGTCATGGCCAGCTCTGTGTATGAGGA TTGTATTGAATTTTCAAATTGTTTCTCTTCTATCAGATCATTCAATAAAT ACTTATTAGAAAGACATAATAGATATTATCAAACTGTAATTCTCATTCTT TCTAAGGTTGGAGGGTACGCAAACATTATTTTAGCATCAAATCCAAAGAN CGTTGAAAATTCTCTCAAAAATGCTGACGTCAGCACAAAATATTGCATTT TTGAAGACGTATCGACCAATTCCGGGGGACTAAGTCCACTAAATGNCTAT CAGATCATTCAATAAATACTTATTAGAAAGACATAATAGATATTATCAAA CTGTAATTCTCATTCTTTCTAAGGTTGGAGGGTACGCAAACATTATTTTA GCATCAAATCCAAAGATGGGGCAGCAAAAACGAAATATTTACTCAGTTGG GTAAGTAAATGGTATCTCCCCATAATGGTATTAGTCCGGCGGCGATCCAG GATCACCCTTACAATTAGTAAATATGGGTTTTTATTTTATTTTCCCATCA TATGGTCCCTTGGGACCCCAAAACCAGNNNNNNNNNNNNNNNNNAGCTAA ATGAGAACTTCAAAAATCGACTTTCTAAGGACCCCCAGGCTAAAATGACC CTACCCCCTTCAAGCCCCCATAAAAAAATTTCCCCAGCTTTGCCACATTG GCAAAAACTGGTTTTGGGGTTCCAAAGGACCATATAATGAGAAAATAAAA TAAAAACCCATATTTACTACTTGTAAGGGTTGATGCAAAAAGGCCCTTTT CGCCGCCCGACTATATTGAGTTGAATCCAAATTTCCAGTTTTTTTTGCAA CATAAGCTGTTAAGATACATTTTTTTTCTCCATGAACCCAAACTTCACGA TAAAGCTACGAAATAATCAAACAATCTCCATTGTATTAATGTTTGATTTT CTCAGTGAGTTACGATAGCTTTGTTTTAGCTACAATCAATGGCTTGATCA TTTCACCACTTATAATTCAGGTTGAACATGGACCAGATCTGACGTTGGAC CACCAGACCACATTATTAGGGCTTTTACATCAATTAGTTTCACTACAGGT TTATTTTACTGATTTTTATTCTCTCAAATTTTGTAGTCATTTTATCAGAT TTTGATTATTACAATTATGTACATATCTGAAATCTTATAATTTGATATCA GTCAAAACAGGCAACAGGAATATTTTCCAATTTCTTTCCAGCATCCATTC ATTTATCCAGTCACTTACGCATCGTGCACAGAAAAAGGAGCAACTATAGT TCGACAATTTCATAATACTGGCTCTTTGAGAGATGTTATATGCAAGGTAA AAAAAGTCAATTTGTTTGCTATTGAGGATTTCTTGTATCCCTTCTTAGGA ATCATTTTTAGATTCATACGATTTGATTCGTAAGACTCGAGGTAAAAACT TGTGTTGTCAACTGGAATCGACCATATCAAAATTGACTGATATCAAAATA TGAGTAGAATCATTATCAAACCATTTGTTGTTGTTTGTTAATTGGTCTAT TGAGTTGAACTCCTAATTTGGGGGCTGCCAGCATTTTTGACCAGTACTGG AGAAAGGTTTTTGGTATTCCTTGAAGAAACTACTGGTATTCAGGTATTTT GTACCCTCTGAAGCCTCCATTTAACTTTTTCATTTAAATGTTATCTATCC AGGCAAAACCACATCATCCCAGACTGAAGAAATATGGAAATTTGAGAATT CGAATACCTTTGGAATTCAGTAATATCAAGCGAATTGGTCGGCAAGTTCT AGAAGCACTCAAATTTTTAAAAGACAAAAATTGGCCTTATGGTATGACCC CCTTTTACATGATTTTACTATAGACGTGATCAAACAATAGCCTGCCTCCC AGTGTTAAACTACATTCTACAATACTGGGTGTGTTTTAAAAAACACTCTT TTTTTAATTTTCTCTGTTTATTTATTATGAATTTTGAATTTTCTGAACAG CCGTTATTCATGGAACTGATTTTAAAAATTGTTTTATACATGAATTACTG TCGATCAGGAATCTAACAATCTCAACACAACGAGTTTGAAATGTTATTTC TAAATCAACATCAGCTTTATGTTATTATTTTTAGGTCATTTGCATGCTGG AAATGTTGTAGTTGATGGAAATAATTGCAGGTGATTTTTCGTTCGAACCA ATAGTTTAAAGCAATTTTCACATTATAAGCAAATAGGTTGCCAAAGCTTT AAATTAGCCAATTAAGCCTTTGATCCAATAAGCGTAAATATGGTATAATA TTAGGGATGTTCAAAGCTAATTTTTCAAAAAACTACCCCTGACCCGAAAG TTGGAGTTGCTTATAAAACAAATGCTTAATGATGATAGATGATAGATACT TCTTTTAGCTCTTGAATTGATTTCATTTTAAAGTAATGAATGAAAATACC AGGTCCTATTAAATTTGTAGGAAATGCAGCTAGCCACTATTGACAATTAT GAAAACTGCGAAAGCCAGTTTTTGATTTTTTTTGCTGGTGAAATTCCATG TTCAAAATTCAAATAACACAGGGATCCCACTCCTCCTAAAATTCCTAAAA TAAGTCAAAACTCCTAAAATCCTCCTAAAATGCAGCAAATTCTCCTAAAT TCCTAAAATCTGAAAACTTTATCAAGCACGGTAGCTGATTTTGTTTGTAT ATTTGTATAATCAGACAAGAAACTAAGATTTTTCCTCAATAAAGTCAAAA CAAACTAGGAGCAAGCTACCTGACCTTGAAACAACATGTTTAAAATATAT TTTTGCACTGAAATATTTGAAACAAAATAATGTCAAATTTGTACCGTGGT TTCGTAAGCAAGGCAAACTGTATTCAAAGTACCATAGAAGTGGATGTGTT AGGTATTAGAGCTTAAGTTTTTGTGGATTTGGTACTGTGGCAGAAGGTAT CAGTCAGAGCTAAGTCACTTTTTGATATTTTATTTTGTCTTTGAAATATT AGTTCAAATCTGTGATGGACGGAACGTCCCGTTATAGCAGGGGGGGTGAA GCAGTTAGTACAAGACATCATGCCTACTAACTGCTTTCTCGGAAGAAGTT AGTAACACCACCACCTTGGTACACTTAGTACAGTTAGTANNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNCAGTTAGTACTAACTGAATTTAGCCTTGAAAAAGGCT TTTGACCTTCATAAATTCAATAAAATCAAATAAAATCAAATTTAATATCT TAAAAATGATTCAATATCCATAGCTTTCAATAGGAAAAAACAACATTTTA GAAAATCAAATTTCTTTTGCAACCAGCAAATTGTTTTTAAGATTTAAAAA AAAAATTTCGAAAATTTGAAAAAAAAATGTACTTCCCAAAAAAATTTTTT GGTAAAATATGGTCTTTTTTTTTTAATTTTCTCACAAAATCCTATTTTTT ACACAATTAGTACCAAAATTTGGCAAATTTTTAGCAGGGGACCACCCTTT TTTGCAGTTAGTACATCTGAGTACTAATTGATTTTATCCAATTCATATGG CACACCACCACGGTACTAACCGGCATGATGTCTTGTACTAACTGCTTCAC CCCCCCCTGGTTATAGTTATAACTGAAAATATGTGACGGACAGGACACAA TTTTGTTGTTTTCGAAGCAAAATTTAGTATTCAAAGCTTCTTACAGGAAA AATTAATCAAAATCTTTACAGTTTTCTCCACTATTTGGTCACATCTTGAT GGGAGAGTACTCAAAATACAAAAATACATCCTCAGAACATACAATTTCTT AAATAAATAAGCATCTTGTGCCGAATTCACCTTTGAAAACAAAAAATTAT GTCCCGTCCGTCACACATTTTCAGTTATAACTCAAATTTGGCTCAAGAAA ACAGCCTGAAATTTTCAAATCATATACTTACATTATAGAGTAATACTTTT AAATAAAATTGACTAAAATTTAGAAAGCCAAATTTAAAATTGAGTGGATA AAAGACAAGCATATGAGTGACGGATGGGACGTCCCGTCCGTCACAGATTT TTGCTAATATTTCAAAGACGAAACAAGTATCAAAAATGACTTAGTCCTGA CTGATACCTTCTGCCACAGTACCAAATCCACAAACACTCAAGTTCTAATA CCTAACACATCTACTTCTATGGCAATTTGAAGACAGTTCAAAACCACGGT ACAGATTTGGTGCAATTTACCCCTATGTTTATTGAAGGAGTGCAGACTTT ATTCAACAAAGAGAACTCAAATGTTTTAAGGTTTGATGGTTTGCGCCCTC ATCTTTGAATTTTTTACTTGAGCATAAGCTTTGTTACAACACAATGCCTT TCCCTGTTAATGAAAAGAAATATGAACGCTGACAACTATTTTCTAACTGC ATTACAAAATGTTCTAAATAATCTGCTTTAATGTTTTGCCATTCTATTTC ATCCGCTTTAATTCATTTTGCTCTTTTTTAGTAAACAGAATATAAAAGCA GTAAATGTGCCTGATTATTTATATTCAAAATAAGTTGATAGTGTGCTTTA GTTTGTTTTTGAGGCTCAACTATTATGACTAGTTTTATTGTGTTTGTGGA TGGCTTAATTTGCTTAGTACTCATTGGTTTCCAAGTCTATTTTTTTTTGT ATCTATTCAATTTTTGGAAGATCTCAAGATGAGTTTTTTGGTAACTAGCC TTCTGTTGAAATATCTATTGTTACTTTGAATAAAATCAGTCTATATTGCT CAGATTACATCTCAAATTTGTCCCTAGTTTTTCTAATTCAAGTTGCCTTT TGTTAATATTTTTGATCTTGTAAGTTAGCAGTAAGTATGACTGGTAATTT AGCCATATTGAGAGAATTTCTTTTAGAACGAACAATACTTTACGTAAAGT AATTTTATTTTTGTTACATTATTTTAGTCTTCCTGTGGGTGATTTTTTCT GATTGCTGACTTCAGGTCGATTTTAGAAATTTATTTCTTAAATTTTCCTA AAATCCTCCTAAAAAATTGAAAATTCTCCTAAAAATCTCCTAAAATTTGG CCAAAGTCCTCCTAAAATTTGTCCTAAAATTAAGATATTCAGGCGTGGGA TCCCTGAATAACATATTTGAGTCAAAAATTTATTTTATTTTTTTCTGCTT GAAGATTGCTGGATGTAGAAAATGGAATACTGGGCCTGCCCACACTTTAT CGATCTTTTATTATGGAGCTCAAAGCTGTCAAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011038XLOC_011038Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019622-exon-sc0000332-1575043694:17393..17510TCONS_00019622-exon-sc0000332-1575043694:17393..17510Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1575043694:15471..15521TCONS_00019622-exon-sc0000332-1575043694:15471..15521Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1575043694:15261..15308TCONS_00019622-exon-sc0000332-1575043694:15261..15308Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1575043694:14830..14925TCONS_00019622-exon-sc0000332-1575043694:14830..14925Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1575043694:14309..14405TCONS_00019622-exon-sc0000332-1575043694:14309..14405Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1575043694:13705..13782TCONS_00019622-exon-sc0000332-1575043694:13705..13782Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1575043694:13211..13287TCONS_00019622-exon-sc0000332-1575043694:13211..13287Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1575043694:12563..12640TCONS_00019622-exon-sc0000332-1575043694:12563..12640Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1575043694:12315..12419TCONS_00019622-exon-sc0000332-1575043694:12315..12419Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1575043694:11820..11958TCONS_00019622-exon-sc0000332-1575043694:11820..11958Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1575043694:11481..11526TCONS_00019622-exon-sc0000332-1575043694:11481..11526Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1575043694:8327..8406TCONS_00019622-exon-sc0000332-1575043694:8327..8406Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1510915933:17393..17510TCONS_00019622-exon-sc0000332-1510915933:17393..17510Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1510915933:15471..15521TCONS_00019622-exon-sc0000332-1510915933:15471..15521Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1510915933:15261..15308TCONS_00019622-exon-sc0000332-1510915933:15261..15308Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1510915933:14830..14925TCONS_00019622-exon-sc0000332-1510915933:14830..14925Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1510915933:14309..14405TCONS_00019622-exon-sc0000332-1510915933:14309..14405Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1510915933:13705..13782TCONS_00019622-exon-sc0000332-1510915933:13705..13782Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1510915933:13211..13287TCONS_00019622-exon-sc0000332-1510915933:13211..13287Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1510915933:12563..12640TCONS_00019622-exon-sc0000332-1510915933:12563..12640Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1510915933:12315..12419TCONS_00019622-exon-sc0000332-1510915933:12315..12419Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1510915933:11820..11958TCONS_00019622-exon-sc0000332-1510915933:11820..11958Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1510915933:11481..11526TCONS_00019622-exon-sc0000332-1510915933:11481..11526Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1510915933:8327..8406TCONS_00019622-exon-sc0000332-1510915933:8327..8406Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1491911889:17393..17510TCONS_00019622-exon-sc0000332-1491911889:17393..17510Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1491911889:15471..15521TCONS_00019622-exon-sc0000332-1491911889:15471..15521Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1491911889:15261..15308TCONS_00019622-exon-sc0000332-1491911889:15261..15308Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1491911889:14830..14925TCONS_00019622-exon-sc0000332-1491911889:14830..14925Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1491911889:14309..14405TCONS_00019622-exon-sc0000332-1491911889:14309..14405Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1491911889:13705..13782TCONS_00019622-exon-sc0000332-1491911889:13705..13782Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1491911889:13211..13287TCONS_00019622-exon-sc0000332-1491911889:13211..13287Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1491911889:12563..12640TCONS_00019622-exon-sc0000332-1491911889:12563..12640Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1491911889:12315..12419TCONS_00019622-exon-sc0000332-1491911889:12315..12419Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1491911889:11820..11958TCONS_00019622-exon-sc0000332-1491911889:11820..11958Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1491911889:11481..11526TCONS_00019622-exon-sc0000332-1491911889:11481..11526Clytia hemisphaericaexon
TCONS_00019622-exon-sc0000332-1491911889:8327..8406TCONS_00019622-exon-sc0000332-1491911889:8327..8406Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000332supercontigsc0000332:8327..17510 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.87592 1.89257 0 1.2915 0.106012 0.0828077 0 0.192061 0.369524 0.00162868 0.600574 0.0389137 0 0.247106 0.211395 0.172298 0.0798794 0.541827 0 0.900876 0.220369 0.659125 1.88227 0.594609 0.0307426 3.19684e-08 1.09076 0.964641 1.57663 5.46797
Blast
BLAST of TCONS_00019622 vs. Swiss-Prot (Human)
Match: PXK (PX domain-containing protein kinase-like protein OS=Homo sapiens GN=PXK PE=1 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 2.303e-91
Identity = 154/331 (46.53%), Postives = 215/331 (64.95%), Query Frame = 2
Query:   23 MSVLEKKGKGK--LDDTVVLKCNITGFVNIDGHTEFKLKVQRGSNPDNSWEVMHRYNDFXXXXXXXXXXXVGIEVPFPPKKAFGNMDSAFLQERRFGLQTFMDLVLSNSLFSQNIAVKRFLDPGNYSDNIDXXXXXXXXXFFRSEPNWELQENMKEIGWRVRKHYFSIKSKDGAAKTKYLLSWVEHGPDXXXXXXXXXXXXXXXXXXXXXPFIYPVTYASCTEKGATIVRQFHNTGSLRDVICKAKPHHPRLKKYGNLRIRIPLEFSNIKRIGRQVLEALKFLKDKNWPYGHLHAGNVVVDGNNCRLLDVENGILGLPTLYRSFIMELKAV 1009
            M+ +EK   GK  LDDTV L   I    ++  HTE+ ++VQRG + +NSW+++ RY+DF  LN  L     G+ +P PPKK  GNMD  F+ ER+ GLQ +++++ +N + S    VK+FLDP NYS N  ++A QQ +MFFRSEP WE+ E +K+IGWR+RK YF +K K+   K + +LSW + GPD  L  +     +      L  P+IY VT+A+  E  A ++R F+  G+L+D+I KAKP  P LKKY N +    LE   IK  GRQ+LE LKFL DK +PYGHLHA NV++DG+ CRLLD+EN +LGLP+ YRS+  + + +
Sbjct:    1 MAFMEKPPAGKVLLDDTVPLTAAIEASQSLQSHTEYIIRVQRGISVENSWQIVRRYSDFDLLNNSLQI--AGLSLPLPPKKLIGNMDREFIAERQKGLQNYLNVITTNHILSNCELVKKFLDPNNYSANYTEIALQQVSMFFRSEPKWEVVEPLKDIGWRIRKKYFLMKIKN-QPKERLVLSWADLGPDKYLSDKDFQCLIKLLPSCLH-PYIYRVTFATANESSALLIRMFNEKGTLKDLIYKAKPKDPFLKKYCNPKKIQGLELQQIKTYGRQILEVLKFLHDKGFPYGHLHASNVMLDGDTCRLLDLENSLLGLPSFYRSYFSQFRKI 327          
The following BLAST results are available for this feature:
BLAST of TCONS_00019622 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PXK2.303e-9146.53PX domain-containing protein kinase-like protein O... [more]
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