TCONS_00019780 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00019780
Unique Name	TCONS_00019780
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3800

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000336:173064..196614+

transcript sequence

>TCONS_00019780 ID=TCONS_00019780|Name=TCONS_00019780|organism=Clytia hemisphaerica|type=transcript|length=3800bp
aaaaattataaaattaatgGCATTATAAAGTAATTACTGGTAAATGAAAG
AATCATGGTCAATTATCGATTAAAGAGGTATGGGAGCTATAAAAGATGGG
CTAAAATAGCACGTGACTTCGACGAGCGAGACATCACCGCAAGACGTTCT
GCACCATCATCAACAAAATCGTCCCGCAAACACAGTAAAGCTTCATCGAT
CACTTCTGAAACACCTTTGACACGTTCACAACGCAAATCAAGCAATACAT
CACTGAACGACATTTCACCGCCAGAGAGACCATCATCAACAAAAGCTTCA
CAATTAAGAGGAGTTGTTCGAAAACTTTCTTCACAGAGCGATGAACCGCG
CCTTGGCAGCACACCATCGAGTCTAGCGGCCAGTCGTGAAAGCATTATCG
AAGAATGGGAACGATTTGAAAGTTTGGAGAAGAAACAAGAAATCCAAGCC
TTGAAAAATCACATCGCTGAAATTAAGAAAGAAAGCGATAGGACTACAgA
ATTATTGATCAACAAGAAGAACCAATACGAAGAATCGAAAAGTGAATCTT
CCGCCAAAGATGAACAAATCCAACTGCTTCAAAAACAAATCAACGAACTC
AACCAAGTTATTGAAACATTACGAGCCGAGAAAGATGAACCGAAAGAGAA
AGTGTTTATTTCTAAGGAAACCGATTTGGATGTTGGAGTAGAACCCCAAC
atgaaattttagcgaaaaaTGAAAGTTTGGTATATCGTGTCTTAGTCAAA
GAATCTACATCTAAAGGAACTGATACTGTAGATCTTCAAAATATAAACAT
TGAATGTGTGAACCACAAGGTCTCAATGGAGTTTGTCTCTCGAGAAACTG
ACACTTTCGATCTTAACGAAGCTGTTTTGGTACAAGAACAATTTGGAAAG
CTAGAGGAAGAAGTGTTAGTAACGCGTGATGAGATTAATGAGGTCTGTGG
TCAGGTTTGTGCTGAGgaagatttgaaaatattacaaaaggaaTACGATC
AACTTTCCTCAAAACATAAAGACACGACGGATAGATATGAAAAGCAAATT
GAACTTTCCAATACGTTAGAAGGAGAAAATAAAGATCTAGCCAACGATTT
ACGGACAACGCGGCAACATTTGGAAGATATGACTTCAAAACTGAATAACG
TTCAACAATTAgtaaatgtaaaaaataaagaaatcttCGAGCTTTCTTCT
TCGGTCAATCTACTACAAAAGGAACTAGACTCTACAAAAGATTTAGCAGC
AGAACAACAGGCTAATGTACGAAACAATAATCTTACCGAATTTGAAAAAC
TGCAAAATAAGATGAGTCTTGTGGAGGATGAACTGATGCAAAGTCGACAA
CAAAAGGAATTATGTGAAGATAAAATTGAACAACTTATGAATGAAAACGA
ACTGCTAAAATATGAGAAAATTTCTCTTGAGAAAGTTACAGAGGAAGTGT
CACTCCAGTCTGCCTATAATCCGCTAGAACCATCAATGGGTGAGAAAAGC
GATTCGGATTTAGAGCTAGGGCTATTACGACAGCAGCTTGAAGAACAGCA
TCTTGAAATGACTAGCCTTGAAACCAATCTTAAATCAGATGTCAGCGAGT
TACGACAAAATGCGGAAAATCAGGAACAATTGATTGCTAAGCTAGAACAT
GAAAATCAAAAGCTTTATAAAGAGAAATATGAACTGAATGAAAATATCTT
GGTGTTGCAAGATCGCATCAACACAATATCTAAGGAACACGAGAATCTTT
TATCTAATGAAAACGAACATCGTACTTCAATCGAGGAGGATTTAAACGAT
TCGATGAGCTTCTCCGAACACGATTCAAAGATCGAACAACTCTTATCGAT
TCATAAGAACGAGATGGATATGCTTCAAGAAAAACTGAATGAAACCGAAA
AAGATCATGAAAGCGCATTACGTGAAAAAGACGATTTGATTTCATGTAAA
GAGCAACAAATCTTGTCTTTGCAAATTGATCTTGACGAGAAATCAAGGGA
TTTGAAAAGCCTGAATACAGAGTGTTCCCGTTTGCGCGCGCTCAAAGATA
AAGAGCAAGCGACGAGTGACGAACAAGAATCGTATCTGCTTCAGGAAATC
GAACACGTGCAAcacgaatgtaaacaaaagcTACACACTATGGAGGAGGA
TAAGGATCGTCTAACCGCTCTCCTTCAAAAACAATACGATGAAAAACTTA
TCGAAATGGAAGTCgaatttgaacaaaataaatctattgAAATTGAAAAC
GTTCGAGAAGACTTACAAAATGAGATTGACTCTTTACTTGCACAAAGAAC
GGAACTGATGTCAGTTCTTAGTAAAATGGAATCATTGCTTATTGCAAGAA
CACCGACGAGCACGACTTCATCGTCCGGTAGAAACGGGTTCCATTTTGAT
TTCCCCGATAATGGAAAACTGGAAcggaaatcgaaagtggaacaTTCGAA
CGATGATATGCTACTTATGATTTCGAATCTTGAAACTCAAATGAATGGAA
CAGATTTAAATAAAACATGGCCATTACTTGAGAACCACACTTCTTCGAAT
CGGAAAGCGCCGCTTTCTCCGAACGGTGTCAAAGCACAGTTCGAAAGAGC
ACGTAGTGACATTTCGTTACAGTTACGAGAACTTGATGACATCATGATGA
GTGATTCACGTTTACCGAGTTTAAGCGCGTCTGAAACGCGTTCACATGCG
TCTGAACCGCGTATCGGATCAAGCTTAAATGCTTCTTTTGATGAACTTTC
GTTTGACCACGATGATAGTATTTCCGCTTCTTCACCGCTTACAAAACAAA
CGCCCCTTCATTCACCCACTACCACCCACACGCCATCACCCTCATTCCGT
GATTCAGGGATTTCAACGATAGAACTATCAAACCGTAACACGTTTTACGA
GAAACAGTTACGAGACTTGTTACGTTCTTTCTTAAGATTCGAACTACAAT
GTCATTTAATTGCGACTGATTTCTCTAACGAAAAATGGTTTTTAGACTTG
CAGAAATGGAAAGATCGCGCCAATAAACGCTTGAAAAGGCTCGAACAAAG
ATATTTGAAATATGATAATACTCTTTCGAAATCGATCACTTATCGACCGA
CTGATGAAGAGGTCAGGGAAATTATTGCTGACgtcaacaaaaaatatgat
CGGTTCAAACAGcatgaaatttaaagtttttttcagaatatatttttaat
ttagTTCGAACTGTTTGAAAAGTATTTGCATGGGGTCTCTTCCTTTATAT
GATTTCATTAATTTTATAGACCATTTCATGCTGCGAAATGAATGATGGTT
AAACAGGACTGATATCGGTGTTTATTCTTTTCAGAATGGTATCTACAAAA
TAACCATTTGTATAATGCTAAAAGTCCCCTAACGGCAAACAGCGCTGCAT
CATAAATACTCAGGGAAAATCAGATCTAGAGCTCTCTAGTGCCACTGTCT
CAGTGCCTCGGTATAAACGTTTTATTCTGGGTCTGTTTTTAGAGGATTtc
aaatagacgatatcggctttccgaattctccccgaatgattacccatgat
gcattgcgcaaaaaattcacggacgatatttACTTTCCGTGANTCCTGAA
AAGAGAAGAGAAACCTCCAGTGCTAGTGCCACTGTCTCAGTGCCTCGGTA
TAAACGTTTTATTCTGTGTTCTtccaaaacctttaaaataagCAGTTAAG
TTTAAATATTCTATGCTCCCTTTACCAATTTGTTGGTAATGGAATAATAC
GATTTGTatatttattgtaaatattttgaccttATTAGGAAAGAGTGCTG

Run BLAST on NCBI

transcript from alignment at sc0000336:173064..196614+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00019780 ID=TCONS_00019780|Name=TCONS_00019780|organism=Clytia hemisphaerica|type=transcript|length=23551bp|location=Sequence derived from alignment at sc0000336:173064..196614+ (Clytia hemisphaerica)
aaaaattataaaattaatgGCATTATAAAGTAATTACTGGTAAATGAAAG
AATCATGGTCAATTATCGATTAAAGAGGTATGGGAGCTATAAAAGATGGT
ATGCTATtgtgtttgttttattttttctattgtatGTTAACCAGATATTG
TCTCTTCCCAAGCTTCTGAAAAAAGTATACATACCCCTATCTCAGTGACC
AAGTAAGAATCTGTTATAGGTGATGTAAAATGACCAGTTTTTAAATGGGT
GGGATCAATATTGTTTACAGTTCAAAAATCCAGTTGGGACTctcaaaatt
atattgttctAGTAGGGGTGAGATTGCAGTGTAGATTTCCAATGGTagat
gaaatttcagggtactTTTCTCACTGGGATTAATTCTTTGGACTATTTTT
CAGATGGTCAGCTATTCCTCCAGTTATATTCTCAATACAGTTGTCCTAGA
ATCTGGCAATGGTTATGTCCACTGTCTGAAGGCCTGATCCTATCAggagt
ctttttttttcttttttcctgaaaCGAGGTCATGGGCTAACAAACTTAAA
TGCTTTAATTGATAGAATTTGGCCTTTGATTCGTTAAAAAGAACTGAAGT
TGAACTCACAGTCATTTAAGCTGTTCCACTCTTGGACATGTTGCACTTCT
gtgaaattgttcttaaaatgatGATCCTAATTTTAGTTTACCTTCAGGTC
GTGTTGAGGTTCATAGATACACTTCTTAGaggactacacgttttttttta
taagaacaaactatataagaacataaggcttcgaggcccaagaatttaag
aacattctaagaacatactaaggctttggagacataaaaacatgcaattt
cttaagaaattacatcaaaatgctcaaaaaatgctgaaaatatgaacatt
ttaagaacatttttagttcttataaaaaaaaacctgtAACCTAGGGGTTA
GAATATATGACATTGGTAGAAACAGTCGACAAGAGGGTTAACTATTTTTT
GTTATGATAAAAAATACCTTTCATCAAATTTGCATAGCAGGGAGTATAGG
agccattttgttttaattGGATTAAATCCGTAATCGTTGTTAGTTTAGTT
GTCCTGGTAACCTGTTGCAAAGTGTTTAGATCTATCCAACATGCGTGGTT
TGTGATGACGTAGCTCTTAGTAACTTCTCTTCCTTGACAAAGTTCCAATT
TAATAACGTATATATTTTAGGCATAACCTCCAACTTTTAGGACActattt
tgaaggttttttaaTTTAGTTTGAAAGCACTAACGTCATGAAAACGGATT
GGTATGTGTTAAAAAGATTTACAGATTTCCAAGGACTGTCGAATTCTCAT
TTCAACCCCAATCGATTAAGAAAAAATTGGCCCAGATATCCTTTACCGAT
CAAAAAATTCCTTATTCGGGAAAGAAACCACAAACTTGATTCaactttta
tgaaaatttggaAGAAGAAAACTACTTTGTTGCATTGCATAGGCCGTCAT
AATTGGACGTCTTTTGTTGATTAAGCAATTATCGGTTTATAGCCTCATTT
CCTGTCAAAACTAAAGACACATGAATCAATCTTGTTGTGTGCGAGTGATG
CATAGAAAACAAATACTTTCTAATACAGCTATCTATTAACGTTGTCATCA
TATATTTTGTTTGAGACAGATTTAAGgaatgttttttgtttctaTAAGAC
TTTGATATCTTATGGAAAACTTTTCGATTGGTGATGGTGTAGGTATAATG
GGGTTCTCTCTTCAGTCTAGtggtattttattttgaattgagTCAATTGT
TGTGAATAGCCAAGGCAGTGTCTTTATTGTTTATGTCCTGCCTTTAGTTA
TAGCATATATGTACTTCATCGAGTATCTTTAGAGCTGGGTAGGCTACCTT
CCTCTTAATTGTGTTTGTTGTTTATGCAtgagaaatttattttgcatagC
CTCGTGATCAGTAAGCAGTACAAGATGTCAGGGAAAGTTTATTTGCAATC
TTAAGAGTTTCAGGCTAGGGCATTTTACGTAGAGATTCCGAGGTTGCTAT
CTAATTTTGTTTATAAAGATGTATCAAGATTTGCAAAGTAAACATAACAG
ATTAGAACATCATCAATTAGATTCTAAACACTTTGGATGACAATTTAAAG
CGTTTAAACTGTTACATTGAACTTTATAAGTATTTAGTTTCGTAGTTTCG
TCATTAAGGGAAATTTAGACTCGTTTCAGATTAGTACTGTGACCTTGTGA
ATAGTAAACCATTACCCTAGCCTAGTCACCAGGCCACACCAATGTTTTTA
TTGACTTAGTTTTACGTATATTAGGGGTCTTCCTTCAACTAGAGTTTTAA
AAGAGCTATTGTTATTTATTTTATGAAGCGGTCATATTACAAGTTGACAG
TGAGacctttttctgcttttttagAATATTGATCTAACATAGTTTGAAGA
AAGGTGATGAGATTTTTATTTGTATCGTGCAATGTCACAAAATGAAAGTG
TATGACAAGAATGTCATCTTATCATTGATAAGAAAAGAAAGTTAGTTAGT
TTGTTGTTTTGTGAGTTGGATCAAAAGAAATACTTGATTTCATGCTATGA
TTGTAGAGTGCTGTTACTGTTGTGTAGtgatataattttttgtttaaaag
tcattaattgattttggaaaatattttagataattttCTCACAGTTAAAT
TCTGTCATTGTGCAAGATTTTACATTTGATGTTTATGGATGATTTACTTA
TGATATTTGTGAATGCTTCCAGGGTGGATTGTACTACTTTGGATTTTATG
AAAGAGAATGCCCTACACAGTAGCTTAGCTAATTAAAATTTCTGATAGTT
ATGTACAAGGTTTGTTAGTCAAGTAGTATTATTAATTGTCTCAATGTAAT
TGTCaataaagtttgaaattttggaatttagtaTTCCTATTGTACATTTT
CAAGATAGAATAGGAAAGAAAATTGATACTTAAACTTGAAGCAATGCCAG
TGATTGATACCAAGTTATatacacattttcataatcttttTTGACTAACG
GTGAAATAACCTGTAGAATTGCCAAGATTGAcaaattattcttaattttt
cagactagaTTCAAAAgacacacctccttctcacaaacccactggggccc
cttcccactggaaaaattggccaaaaatcagataagcaaatcctcactgc
aaaatattgtgctattttatCCATCCCCGAtaaattttctggctcgaaaa
caatgaaattaaaatcCCCAGCATTAAAAAACATAAGAATATCAATAGCA
ATACCCATTTAGTTTTGgttcgttatttttatccccaccggCTCGAAAAA
TCTCACCAGGTCTATGAAAATGGGAGTATAGACCTTTTGGTGAACGTGTT
TTTGAGACTGCTGCCCAATTTAgatctcttttttttcaatagtCAAATTC
AATAGTCACAGTAGAAGCAtttatgaaattctttttaaagtctGCGCTGA
GGTacacagtttttttataagaacacagtttataagaacatttaggctga
aatttgagaaaaaataagaacatcgtaagaacatcaGCCTGCGAATTGAA
GATATTAACAAAATTTGCTTTATAAATTATCTGAATTCAAAAGTAACTTT
TGTAATTGCAGtaattcttttacttttcaacTTTAAATGAGAGTAGATTT
GTTCGACTTGAGGGTCAATTTTTATAACCCAATTTAGCGAATTAATTTCA
AGAACGCCAATAAGCACATTTTagtctcaaaaatataaaaaaaagagttt
taaaTTGGATATTCTCAAACTGATATTCTTGTAGAAagtattcttatcaa
aaacGTGTATCAAAAGTTCCAAACGAATTGAAGCTTAAATTTATTGTCGG
TGTGATGATTCCACATTGCCGAtaccttgaaaaaaattctaaatgcCTTT
GAAATCGCTTTTGAAAATTATGTTAGATTTGTCAGACTTCACAGAAGAGT
TTTAAAATCTTAGTTTGTTTCTGAAATTTGAAcagctttttttttcaaat
tcgaaaCTTTCAATGGCTGTTACTAAGTGTACTTAACAAATGGTAGATTG
TAATTTTATTTGACTTTATTAATCGTTTTGATCGGGGTAATCTGAAAAGG
TTTGTAAGATATATCTTCCTAGATTATGAAATAGTGCAGCAAACTGAACA
GATATTTGACTGCAGATAGAAAAATAGTTATTTTCAACGTTACACTTATT
AGTTTACGTGTTATTTAGCAATAGTTGGTTTGGAGACTTAAGTTCTACGG
GTTTATCATTGTTGAACGAGCAAAGATTGACACCAAGTCAGTAAATCCaa
cccagacggcacacaacgtcgaaacaacgtccatgtgacattcaaaACGT
TCAAATGACGTtttttgaacgttaaaacaacgttgtgtaccagctgggaa
gAGAATCTAGCATAAAAAGCTAGCTTCTAATGCTTCTATACACGTTTCTT
TATATTCTATTCATTCAAGTATATTGAGAACAGCctctgtttttcatttt
ttcgaagTTTTCAAGGCTTTGAATATTctcaaaaaatgttcttgataaac
tttttttttaaaggactTAAATTTTTCATCGATTTGTGAGATCTCCAAAC
CAGTTTGATTTCGATTGGCAGATTTTAAGCCTCGTGTTCCTTTGAAAAAT
TGCTTTTAAATTGTCACCAcacatttcttttataagcgtcaaaatctaaa
atctaaaatcctTTTGAAGCATTCAGGTGTTCTTAATACTTTGGGTTTTA
AAATTGTCTTATGTTCAGCATTACCATTTCCTACGAAATTGCACGTTTTA
GAGTCTGAAtagtattaaaatgttcttagaaagTCGTTAGACCTCagagc
cttatattcttatatactttgttcctATAAAAGCCGGGTATTTCTGACGT
CTGAGGTTCCTTTGGAGAACTGCTGGTAGTAACCAAAGTTTCAGTGAAAA
GCATGGAAAATANGGTTTCTTTGGAGAACTGCTGGTAGTAACCAAAGTTT
CAGTGAAAAgcatggaaaatattttatttggcTAATATTTGATATCACTT
AGCATGGTCAAATTAGAGTTTTGAGACACAGATACGTGATTCTAGTCAAA
GTCATACTGGTCGCCTAACACAGTTTATCCGAGCAgtgaagaaagaagaa
gagaaTTAAGTTCCAGAATGGATAGAAAATTGAGTTGTTTTAACTTGTGT
TTCAGGTATGTGGGATTTGTACAGTTTTATAGTACTAGATTGTTTGTAGG
TTTCTTGGAGTCAATGTAGTCCAGATTGTTTTTTTTCCTCTGAATATTTC
GGTTTCGGAAAGAATAAGAAGTTTTGTATAATAATTTTCCTGAACTCTTT
TGTCTTCCTAGACAATTCGAAATATGTAAATGGAAATAAAAACGTGATTT
TTTTAACGTGGACGAAGatcatttcaataaaaatgcCTTTTGGAGGAGTG
GATAGTATTTTTCTTTGCGGGTAAGTTCTTAAATGCTGACATCAACAAAA
AAATCTCCCTCACaactttaaatgtttttaatatcatCACTTGTAGAAGT
ATCTATTAAAAATGCcaagtttttataattttgttggtccaaaaattata
aaatctgCAAAATATATCAATCCGATTGAGGATAAACTCTAGGCTACCGG
ACAGTCACTGGATCGATACGAAATTAGATGAAGTTAAATCAGTTCAAAAA
GGCGGAAATATTGCCTAATGTGTTATCTCTTAAACGAATTCCacttaaaa
actttagaaatacgACTTACTACTGTACtgtcttcaaaattttctcacaa
AGATTTGACATTCGTTTCATTCATTTGTATTTTGGCCTCaaacattgcaa
ttttttgaatGGATGGATACCAGCATCCTGTATAAGCTACACGAAACATt
tttttgcaacaaaaaaattaacatatttttaaaagtagtttccgcaaaag
taaaattttcgattttttttttatatcctttTCCCGTTTTTCATACAGTC
TTGCTAATGTGTAATCTCGGCGGGACGCCTTTTGACGGATTAAATCTAAT
GAAAAGAAcgaaacaaaatcattttttaaagatagCGGTTTCTGATTTCG
CATTTCATTTTCGTGTTGGTTTTCAACTTGTTCGTAACTTGTTAACCCCT
TGGAGAGAGCAATTgaaattatatatattttcaacTGTGTAGAAAATCGT
taacattattttttttatatatctgGGAtaagaatttttcataatttgtt
CGAGTGATAATTTTTCGAGCAATTAACAAAATTTACTTATTGAGCTTTAT
ATTTTTGTTGACATGCCAGCATCACGTAAGAAAGTGAGGCAATTTTTTGC
CTGTGGGTAAGTCTTTTTTTCTCACATACCTGGTAAATCGATTACATTTT
actttttcccctttttctcaTTTAACTGGAATGAAATTACGTGGAACTGT
CATCctgttttttttaaactaaattgTAACTAAAAGATAACCTAGGTGNA
gcttttttcctaaattttcacagcttaatccatacatgaatggaactatt
ttcaaaagagattggttttcaaaatcttgattaagacgttgttaaatcaa
aattgtaattttgaaaatttctaaattttcagtttggactttgcaatatc
gaaaatcttgaaatatttcataNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAATGGAAATAAAAACGTGAA
TTTTTTAACGTGGACGAAGatcatttcaataaaaatgcCTTTTGGAGGAG
TGGATAGTATTTTTCTTTGCGGGTAAGTTCTTAAATGCTGACATCAACAA
AAATTCATATTATTATCACCTGTAGAGTTTCTACAAAAAATGCCAAGACT
TCTGCTGTAATTTTGATGGTACAAAAGTTATAGATTTGGcaaaatacacc
cctgtatagAACAAATGAAGATTAACTCTAGGCTACCGTACAGGATACGA
AATTAGATGAagttaaataatttcaaaaaggtGGAAATGTTTCCTAATGT
GTTATCTCTTATACGAATTCCacttaaaaattttagaaatacgACCTATG
TACTACTGTACTGCCTTCCACATTTTCTCACAACGATTTGATGCTCGTTT
CATTCATTTGTATTTTGGCCTCAAACATTGTAATCTTTGGAATGGATGGA
TACCTGTATAAGCTATATCCTGTATAAGCTAcatgaaacatttttttgca
acaaaaaaattaacatatttttaaaagtagtttccgcaaaagtaaaattt
tcgatattttttttatatcctTTTCCCGTTTTTCATACAGTCTTGCTAAT
GTGTAATCTCGGCGGGACGCCTTTTGACGGATTAAATCTAATGAAAAGAA
cgaaacaaaatcattttttaaagatagCGGTTTCTGATTTCGCATTTCAT
TTTCGTGTTGGTTTTCAACTTGTTCGTAACTTGTTAACCCCTTGGAGAGA
GCAATTgaaattatatatattttcaacTGTGTAGAAAATCGttaacatta
tttttttcatatatctGGGAtaagaatttttcataatttgttCGAGTGAT
AATTTTTCGAGCAATTAACAAAATTTACTTATTGAGCTTTATATTTTTGT
TGACATGCCAGCATCACGTAAGAAAGTGAGGCAATTTTTTGCCTGTGGGT
AAGTCTTTTTTTCTCACATACCTGGTAAATCGATTACATTTTactttttc
ccctttttctcaTTTAACTGGAATGAAATTACGTGGAACTGTCATCctgt
tttttttaaactaaattgTAACTAAAAGATAACCTAggtgaattttttca
aaaactggtATCCTGGGTCCTTGAAGTCTTTGGAATTAAATCCTAAAAAG
GAGATATTCATTATACCAGACTGTTGAGTTTCACTACCTTGTATTATAAA
CATGATCATATAGTTTTGGAGGAGTTTTTTACCAGAGGAAAGTACCGTCA
TGTATGTAAAGGAATTTTTTtaactacagtatatggcccccaaaacggag
acggcccccaaaacggaggttttcattaaaatgaagaatttgacttgtag
atttatcagaattaaacgatttttgtttattttgaaagaatgatggttat
acttaaaaatgagcatgtttttgctggtttNgatcataaattttacatcc
atcgggtcgtaaatttaagggaaaacacaaatatgttcatagtttttccc
cctattaccactgggcttaaaaaatttgattttaactacacctccgtttt
gggggccccaaacctgcattttgacaaccaggggtatactgtaaaaattt
tatcaaataaatttatgtgaaaattttgaaaaagaacttacAGGAAATAA
Agaagagatgttaaaggttttcatgcagcaaaaatttttgtaaaatctct
tttcctctcgatttgagagaaatttcaaatttgatcgccgttttgggggc
cacatactgtagagTATATCCAGCCACGATTGAAAACTACCTAAGTTCAT
CAAGTAAATTAAAAACTTGTCTGCGTGGTAAATATTGCACGATTAAGTTC
TTTTATACAATCACAGTACTAAACTTTCCAGTCATCGAAATCGGATTATG
ATCTGATTCATATTAAATCGATTCGACCTTCATCGagaaataaaatctaa
tacttTTTTTGACACTAATCTTTTTACATGATTATTATAGGGCTCTTTTT
tcattaaacattttttaagtGAAATATCAGCAGTGTGATACATCAGATCA
TTTTACCAAGTAATGAGAAATCTTAACAACCGTCGGTATTTTTGCCTCAT
GTTAAGATAGCATAGGCTGCGCACATCTCTGAAATTCATTTCGATATAGG
GGGtacgtatcgtgtataaaattcccatcCGAGAGTCACCCCAAATTTTG
GTCATTTCATTTCTATATAAGACATATATgactttttcgttttttgagtA
AAGTAAAGACACACAGAAAGTGTAACGTTCATTCAGCCTGTTCGTTAAAA
TATACCCCTCAAAATGCATGCAGCCCAACGATGCCGCTTTTTTAGACGAC
CGGAACGGCGATttcactacctcggccgctggtctacaTGCACCTGTACC
ACATTTTCCCTCTATGTACAGAATACAATGTATATCACTTGTTCAACATA
AATATTTGCATCACGTTATTTGACTTAGGTTCTCAATCCAATTTTCCGTT
CAgctttctcatcaaaaaatacCTTAGTAGGAGTTTAACTGTTGTGAGTA
GCGTGATTATAACGTAGCttataacttgaaaaaaatctatCTAATTTCAA
CAGTTCCAGGTCTCCATAGCtattatcaaaaatcaaaaaacatatTGATT
TTCATTCTCCATTTTTAGGGCTAAAATAGCACGTGACTTCGACGAGCGAG
ACATCACCGCAAGACGTTCTGCACCATCATCAACAAAATCGTCCCGCAAA
CACAGTAAAGCTTCATCGATCACTTCTGAAACACCTTTGACACGTTCACA
ACGCAAATCAAGCAATACATCACTGAACGACATTTCACCGCCAGAGAGAC
CATCATCAACAAAAGCTTCACAATTAAGAGGAGTTGTTCGAAAACTTTCT
TCACAGGTATAAATTAAATAcctttatcatttttaatttatgcaataCTA
GTAAATTGGCcattaaaagtaatttttaggCAGCGCAGGGAAGGAAATAC
CGATGTTATTTTCTTAGCTAAATATCAATTGGGATAGAAAATTAGGGCAA
AAAGGCGATTTTAGGTATTATTAAGGCTaaatagtctagcaagctagacg
actaattcagacatacagtatgtggcccccaaaacggcgatcaaatttga
aatttctctcaaatctagaggaaaagagattttacaaaaatttttgttgc
atgaaaacctttaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNtgaacatatttgtgttttcccttaaatttacgacccaatggatg
taaaatttatgatttttatgaaatatttcaagattttcgatattgcaaag
tccaaacttaaaaataagaaattttcaaaatgacaattttgatttaacac
cgtcttaattaagtttttgaaaacaaatctcttttgaaaatagttccatt
catgtatggaataagctgtgaaaattttagaaaaaaagcttcactgaaac
tgaaaatattaagctttaaagatatttttctcctatattttgcaaaaaat
gacagaatatgccgtttttgctgattcagcgaaaaaatttatatataatg
ttaattttttgttataaaagtAGTATGTATATGATAGTTCTACTCCAGCA
TGCTCAAAGTGAgtgactcaatgtgtgaaaaacgactcaatgtgtgaaaa
atgactcaatgtgtgaaaaacgactcaatgtgtgaaaaacgactcaatgt
gtgaaaaacaacTCAATGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCTTTTCGCAATCGTC
ACATTCATACATCGTCGCCCTTGGTTTTAAACATTATGAAGAAATGGAAT
CTTTTCTTGCCAATTTATAGGCCAAATGCAAGAGGAATCTGATGTAGGGT
TTCTCTTTAGGATCTTGGATTCttgttcttcaattgaatacgctcgtgtc
ttttttttcttttctttacaatcGATTTTGGGACTAAGCTAGCATGATCT
TAATTTACATTTCCTAGTCTATTTTATTAATCATTTTGGGACTATcgcct
aatctttgtttggggttacctaatccctattaaagattacctaatccctc
tttgggattacctaatctaaGGGAATCCTTTTTGAGATCACCTAATCcat
gtttaagattacctaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNAGtcatttttcacacattgagtcgttttt
cacacattgagtcacTCACTTTGAGCATGCTGGAGTAGAACTATCATATA
CATACTacttataaactattaactcagggtgaaggaatagaattccaaga
ttttttgctttttctcatatttagaattttcggttttgtcaatgctgatt
caagggctccaaaatactggttgaccttcaagatgctatatcttttaccc
agcctctaaagtcacagatgtatttgcattttctgaacggcattaggtgt
agaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNAGGAGCTAGaatgagttatatgcaattttt
atctaattttggtgttaaaatatttcttttagacGCAAAtgtgttatttt
gaatctgtctcaaaccatcaaaaacatgctcattttttagtataaccatc
attcttttaaaataaacaaaaatcgtttaattctgataaatctacaagtc
agaatcttcattttaatgaaaacctccgttttgggggccgtcNaaatcgt
ttaattctgataaatctacaagtcagaatcttcattttaatgaaaacgtC
CGTTTTGGGGgtcgtctccgttttgggggccatatactgtagtagAAATA
acgcaaaaagtaatggaggtagcaattttagtcgtctagaaatcttctcc
aaacaaaagaaaagtgtcaatattacaattataatttttacccactcaaa
aaaattcttgaaaaaagatGTGTGTGGATTTTTGTGTTATAAGTTTTCca
ttttgagttgattttgttgtgaGAGTTTGtcgttgcttgataaattgttt
tctcgctacgcaagtttctgcgtagctagccgggtaTTTaaaaggctgga
acaccggattcttccagtcgtttatacaactttattattagtattagtat
tattagtattacacgcattataaacgactcaaGTCTAAGGCTAAAAGGAT
AATTTAGGCAAGATTTAGGGCAATaaattatcctaaatattctTAACACC
ATTCTTTGGCTAGAGTCAAATTCAAACTAGACTCGTAATACATACGTCTA
AAgccataaaatggcattttagTGAAAGTATTGAGCTGTTGATGCTCtga
aatgacattcttaggttTAGTAGTCAAATCCATGGTGgtggtattcttag
catattcttaattttttggccaatttcattatggacattcttataaatat
aTTCTTATGAATAGAGCGTGTATTGGGCAAATTATTTAACGTAACAGATT
CCCTATGTACAAGGAATAATATTACAAGTTTAACTTTAATGTATTTCATT
ACGGTCCAGCATATCTTTTTTGTTCATTACAGAGCGATGAACCGCGCCTT
GGCAGCACACCATCGAGTCTAGCGGCCAGTCGTGAAAGCATTATCGAAGA
ATGGGAACGATTTGAAAGTTTGGAGAAGAAACAAGAAATCCAAGCCTTGA
AAAATCACATCGCTGAAATTAAGAAAGAAAGCGATAGGACTACAGTATGT
TTTTTAGCTTAGCTTTCTGATACCGTTGTTTAGTATGATTGCAACTGTAT
GTGCCCGATTTTTATTTGTCTCCTTTAGTCTAACATTAAAACTGATCAAC
ATCAAATTATATCAAAATTGTCTGCCTATCCAAAGTGTCTGTCTTTTGCG
AGTACTCAAGTAAGACGGGTGTATGTTGTCATAATAGAGAAACTACTCGA
ACCCAGCTTTTTATGCGAgcgaaccattgagtttaaagcccgaagggcta
gagttcaatctctaatctttctcagacaagaaaaagtgaagcctaaaAAA
Atgcgacagattgaatctaacaattcttttgtttacgattaatatttttt
ttcgaaatttagcggtaaattttagtttcaatctgtcatttgtgtaaaaa
ccaggcgagtcgctcaaggccgcgcaactttggtaggatttgttggcttc
aaaccCTACCAAGCAGATtaacttctagcccttcgggcttatacttcatt
ggagCGAACACTAAATAGAAAGCTGACGttttaattttgattatttcagg
AATTATTGATCAACAAGAAGAACCAATACGAAGAATCGAAAAGTGAATCT
TCCGCCAAAGATGAACAAATCCAACTGCTTCAAAAACAAATCAACGAACT
CAACCAAGTTATTGAAACATTACGAGCCGAGAAAGATGAACCGAAAGAGA
AAGTGTTTATTTCTAAGGAAACCGATTTGGATGTTGGAGTAGAACCCCAA
CatgaaattttagcgaaaaaTGAAAGTTTGGTATATCGTGTCTTAGTCAA
AGAATCTACATCTAAAGGAACTGATACTGTAGATCTTCAAAATATAAACA
TTGAATGTGTGAACCACAAGGTCTCAATGGAGTTTGTCTCTCGAGAAACT
GACACTTTCGATCTTAACGAAGCTGTTTTGGTACAAGAACAATTTGGAAA
GCTAGAGGAAGAAGTGTTAGTAACGCGTGATGAGATTAATGAGGTCTGTG
GTCAGGTTTGTGCTGAGgaagatttgaaaatattacaaaaggaaTACGAT
CAACTTTCCTCAAAACATAAAGACACGACGGATAGATATGAAAAGCAAAT
TGAACTTTCCAATACGTTAGAAGGAGAAAATAAAGATCTAGCCAACGATT
TACGGACAACGCGGCAACATTTGGAAGATATGACTTCAAAACTGAATAAC
GTTCAACAATTAgtaaatgtaaaaaataaagaaatcttCGAGCTTTCTTC
TTCGGTCAATCTACTACAAAAGGAACTAGACTCTACAAAAGATTTAGCAG
CAGAACAACAGGCTAATGTACGAAACAATAATCTTACCGAATTTGAAAAA
CTGCAAAATAAGATGAGTCTTGTGGAGGATGAACTGATGCAAAGTCGACA
ACAAAAGGAATTATGTGAAGATAAAATTGAACAACTTATGAATGAAAACG
AACTGCTAAAATATGAGAAAATTTCTCTTGAGAAAGTTACAGAGGAAGTG
TCACTCCAGTCTGCCTATAATCCGCTAGAACCATCAATGGGTGAGAAAAG
CGATTCGGATTTAGAGCTAGGGCTATTACGACAGCAGCTTGAAGAACAGC
ATCTTGAAATGACTAGCCTTGAAACCAATCTTAAATCAGATGTCAGCGAG
TTACGACAAAATGCGGAAAATCAGGAACAATTGATTGCTAAGCTAGAACA
TGAAAATCAAAAGCTTTATAAAGAGAAATATGAACTGAATGAAAATATCT
TGGTGTTGCAAGATCGCATCAACACAATATCTAAGGAACACGAGAATCTT
TTATCTAATGAAAACGAACATCGTACTTCAATCGAGGAGGATTTAAACGA
TTCGATGAGCTTCTCCGAACACGATTCAAAGATCGAACAACTCTTATCGA
TTCATAAGAACGAGATGGATATGCTTCAAGAAAAACTGAATGAAACCGAA
AAAGATCATGAAAGCGCATTACGTGAAAAAGACGATTTGATTTCATGTAA
AGAGCAACAAATCTTGTCTTTGCAAATTGATCTTGACGAGAAATCAAGGG
ATTTGAAAAGCCTGAATACAGAGTGTTCCCGTTTGCGCGCGCTCAAAGAT
AAAGAGCAAGCGACGAGTGACGAACAAGAATCGTATCTGCTTCAGGAAAT
CGAACACGTGCAAcacgaatgtaaacaaaagcTACACACTATGGAGGAGG
ATAAGGATCGTCTAACCGCTCTCCTTCAAAAACAATACGATGAAAAACTT
ATCGAAATGGAAGTCgaatttgaacaaaataaatctattgAAATTGAAAA
CGTTCGAGAAGACTTACAAAATGAGATTGACTCTTTACTTGCACAAAGAA
CGGAACTGATGTCAGTTCTTAGTAAAATGGAATCATTGCTTATTGCAAGA
ACACCGACGAGCACGACTTCATCGTCCGGTAGAAACGGGTTCCATTTTGA
TTTCCCCGATAATGGAAAACTGGAAcggaaatcgaaagtggaacaTTCGA
ACGATGATATGCTACTTATGATTTCGAATCTTGAAACTCAAATGAATGGA
ACAGATTTAAATAAAACATGGCCATTACTTGAGAACCACACTTCTTCGAA
TCGGAAAGCGCCGCTTTCTCCGAACGGTGTCAAAGCACAGTTCGAAAGAG
CACGTAGTGACATTTCGTTACAGTTACGAGAACTTGATGACATCATGATG
AGTGATTCACGTTTACCGAGTTTAAGCGCGTCTGAAACGCGTTCACATGC
GTCTGAACCGCGTATCGGATCAAGCTTAAATGCTTCTTTTGATGAACTTT
CGTTTGACCACGATGATAGTATTTCCGCTTCTTCACCGCTTACAAAACAA
ACGCCCCTTCATTCACCCACTACCACCCACACGCCATCACCCTCATTCCG
TGATTCAGGGATTTCAACGATAGAACTATCAAACCGTAACACGTTTTACG
AGAAACAGTTACGAGACTTGTTACGTTCTTTCTTAAGATTCGAACTACAA
TGTCATTTAATTGCGACTGATTTCTCTAACGAAAAATGGTTTTTAGACTT
GCAGAAATGGAAAGATCGCGCCAATAAACGCTTGAAAAGGCTCGAACAAA
GATATTTGAAATATGATAATACTCTTTCGAAATCGATCACTTATCGACCG
ACTGATGAAGAGGTCAGGGAAATTATTGCTGACgtcaacaaaaaatatga
tCGGTTCAAACAGcatgaaatttaaagtttttttcagaatatatttttaa
tttagTTCGAACTGTTTGAAAAGTATTTGCATGGGGTCTCTTCCTTTATA
TGATTTCATTAATTTTATAGACCATTTCATGCTGCGAAATGAATGATGGT
TAAACAGGACTGATATCGGTGTTTATTCTTTTCAGAATGGTATCTACAAA
ATAACCATTTGTATAATGCTAAAAGTCCCCTAACGGCAAACAGCGCTGCA
TCATAAATACTCAGGGAAAATCAGATCTAGAGCTCTCTAGTGCCACTGTC
TCAGTGCCTCGGTATAAACGTTTTATTCTGGGTCTGTTTTTAGAGGATTt
caaatagacgatatcggctttccgaattctccccgaatgattacccatga
tgcattgcgcaaaaaattcacggacgatatttACTTTCCGTGANTCCTGA
AAAGAGAAGAGAAACCTCCAGTGCTAGTGCCACTGTCTCAGTGCCTCGGT
ATAAACGTTTTATTCTGTGTTCTtccaaaacctttaaaataagCAGTTAA
GTTTAAATATTCTATGCTCCCTTTACCAATTTGTTGGTAATGGAATAATA
CGATTTGTatatttattgtaaatattttgaccttATTAGGAAAGAGTGCT
G

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_011125	XLOC_011125	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00019780-exon-sc0000336-1491911889:173064..173161	TCONS_00019780-exon-sc0000336-1491911889:173064..173161	Clytia hemisphaerica	exon
TCONS_00019780-exon-sc0000336-1510915933:173064..173161	TCONS_00019780-exon-sc0000336-1510915933:173064..173161	Clytia hemisphaerica	exon
TCONS_00019780-exon-sc0000336-1575043694:173064..173161	TCONS_00019780-exon-sc0000336-1575043694:173064..173161	Clytia hemisphaerica	exon
TCONS_00019780-exon-sc0000336-1491911889:182632..182869	TCONS_00019780-exon-sc0000336-1491911889:182632..182869	Clytia hemisphaerica	exon
TCONS_00019780-exon-sc0000336-1510915933:182632..182869	TCONS_00019780-exon-sc0000336-1510915933:182632..182869	Clytia hemisphaerica	exon
TCONS_00019780-exon-sc0000336-1575043694:182632..182869	TCONS_00019780-exon-sc0000336-1575043694:182632..182869	Clytia hemisphaerica	exon
TCONS_00019780-exon-sc0000336-1491911889:192596..192757	TCONS_00019780-exon-sc0000336-1491911889:192596..192757	Clytia hemisphaerica	exon
TCONS_00019780-exon-sc0000336-1510915933:192596..192757	TCONS_00019780-exon-sc0000336-1510915933:192596..192757	Clytia hemisphaerica	exon
TCONS_00019780-exon-sc0000336-1575043694:192596..192757	TCONS_00019780-exon-sc0000336-1575043694:192596..192757	Clytia hemisphaerica	exon
TCONS_00019780-exon-sc0000336-1491911889:193313..196614	TCONS_00019780-exon-sc0000336-1491911889:193313..196614	Clytia hemisphaerica	exon
TCONS_00019780-exon-sc0000336-1510915933:193313..196614	TCONS_00019780-exon-sc0000336-1510915933:193313..196614	Clytia hemisphaerica	exon
TCONS_00019780-exon-sc0000336-1575043694:193313..196614	TCONS_00019780-exon-sc0000336-1575043694:193313..196614	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000336	supercontig	sc0000336:173064..196614 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.37425e-10	0.503248	0	0	0.900372	0.515877	5.61026	4.39897	1.4156	4.56245	5.25531	2.74343	2.54159	3.06896	1.34643	1.35236	1.53716	1.81991	3.39247	10.2525	1.70159	4.85077e-09	3.19713e-05	0.944512	1.48705	0.151678	11.9775	6.58168	2.03491	6.79213

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00019780 vs. Swiss-Prot (Human)

BLAST of TCONS_00019780 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00019780 (transcript) - C. hemisphaerica