TCONS_00019930 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019930
Unique NameTCONS_00019930
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2197

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019930 ID=TCONS_00019930|Name=TCONS_00019930|organism=Clytia hemisphaerica|type=transcript|length=2197bp
AAATGGTTTCCAATGTAGCCCAAACGGGTGAAAATTCATCTGCTGCTGAA
ACAAActcaaagaaatcaaagaaaaagtcagGTCCTCAATATGAATGCGT
CATCACATGCTTGGATGGCTCTGTGATCAACACTTCTGTTGAGaaaTCAG
CCAAAGGAGAAGAACTAGTCAATAAAGTAGCTCAAGAACTTGATGTGAAA
TCGAAAGATTATGTTGGTCTCCTTTTCAATAATGGAACAAGGcaatGGTT
GGATATTCATAAAGATATGAAACATCAGTTGGGAGatTCTAAAGCAGAAT
TTTTATTTCGGGTCAAATTCTATGAGCCTGAGCCCAGCAAAATTCAAGAA
GATCATTTAAGATATTTACTTTATCTCCAGATTAGAGAAGATTTATCAGA
AAAAAGattAAAATGCACAGAAGAAGTAATTGCTCAACTTGGTGCATATA
CTGCACAAgcTGAAGTAGGAGACTTCAATTTATCAGAGCATGAGCATGAT
TACTTGAAAGATTATGAGTTTGCTGAGAATACCGATATACTTGAAAGAAT
CAATTTATTGCACAAACAACACAGGGGTCAAACACCTTTACAAGCTGAAC
TTAACTTTTTGGAAATTGCCAAAAAGATTCCTAGATATGGAGTGGACGTA
CATGATGCCATGGATACCAATGGGCATGTAGAGATTGGTATTGCTGCTTT
AGGAATAAACATCTATCGGGATGGAAAGCGTGAACAGCTTTTCAGATGGC
AAAATATGCATGACTTCAATTACAACCGAAGAAAATTCACCATTAAACTC
AAACAACCAGTGAGCGACAATGACAATAAGAAGAATTACGTATATTATTT
CGAATCTGCTAAAAGCTGCAAACAATGCTACAAAGTGGCTGTTGAATATC
ATTCTTTCTTCCGATTGACAAGACCTGATGCTCCACGAAAACGTGCTGAC
ACCTTGAAAATGGGATCTAGCTTCAGATACAgTGATCGAACCTTGTATCA
ACTGAGATACCAAAAAGGTGATGAAGCACCTAAAAATGCTGCCAACTTCA
AACGAACGCCAAGCACAAGGAAGACATTACCTCCTTCTTACAAAACACCG
TTGATTGAACCTGAAGTGCCATTCATTGAACCAACTAAAGTGGCACCACT
TGAAGAAGAACCAGTCCACTATGAAGAAGTACCAGTCCAATACGAAGAAG
TAGAGTTCGATGAAGCCAATCCTGATGATGATAACTTTGATCCtgagGAA
TGGGAAACAGTTGAGAAGACGATGCCTGATGGTTCGAAGAAGAAATCCCG
TCGACGGGTCATCGTTCTTAATGTTGTGAAGAAACCAAAGAGTGGGAAAT
CTCCAGTTGAAGAACCAGTTCAATATTATGAAGAAGTGGAAGTCGATGAA
GCCAATCCTGATGATGATAAATTTGATCCTAAGGAATGGGAAACGGTCGA
GAATACGATGCCTGATGGTTCGAAGAAGAAATTCCGTAGACGTAATATCG
TTCTTAATGTTGTGAAGAAACCAAAGATTGGGAAATCTCCAGTCGAAGAA
CCCATTCAATATAATGAAGAAGTGGAAGTCGATGAAGCCAATCCTGATGA
TGATAAATATGATCCTGAGGAATGGGAAACAGTCGAGAAGAAGATGCCTG
ATGGTTCAAAGAAAAAGTTCCGCCGACGAACCATTGTTCTTAATGTTGTG
AAGAAACCAAAGAGTGGGAAATCTCCAGTCGAGGAAGAACCAGTTCAATA
TGAAGAAGTGGAAGTTGATGAAGCAAATCCTGATGATGATAAATATGATC
CTAAGGAATGGGAAACAGTCGAGAAGACGATGCCTGATGGTTCGAAGAAG
AAATTCCGCCGACGAATCATTGTTCTTAATGTTGTGAAGAAACCAAAGAG
TGGAGATGAGGAGAAACCGTCAGAAGTCGACGAAGAACCCATCGAATATG
AAGAAGTTGAAATTGATGAAGCCAACCCTCAAGATGATCAATTTGATCCA
AAAgagTGGGAAGTTGTGGAGAAAGAAAAACCGAATGGCGACAAAGTACG
CGTCAGACGGCGTCGTGTCGTCATTTTGAAGATCGTGAAGGAGCCTGAAG
ATCTGGTGAATGAAAATGAAGTGACTGTCGAAGAAATGCCACTCAATGAA
AATGCTCCAACACAAGAAGATGATGACAAGTTTGACCCTGAGGTAAA
Run BLAST on NCBI

transcript from alignment at sc0000339:287939..298726+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019930 ID=TCONS_00019930|Name=TCONS_00019930|organism=Clytia hemisphaerica|type=transcript|length=10788bp|location=Sequence derived from alignment at sc0000339:287939..298726+ (Clytia hemisphaerica)
AAATGGTTTCCAATGTAGCCCAAACGGGTGAAAATTCATCTGCTGCTGAA
ACAAActcaaagaaatcaaagaaaaagtcagGTCCTCAATATGAATGCGT
CATCACATGCTTGGATGGCTCTGTGATCAACACTTCTGTTGAGGTTTGAA
GTTTTTATTTTCCccttgaattttgatttttgtcatCATGATCATGTATA
GGCAAATGGAAAAAAAGCTATTAAATTTATCTCCAAAGTTAGTTTCTTGA
TTTGATTGGGTtggaatatttattttttgtctaCAAGAACAGGTTGGgtt
taattaaattttaattCCAAATAGTGTGTTATACAGATTGTAAGTGTATA
TTTAATGGTAATTGATTCGGATTAGGCtggacggcaaaccaacaattttt
taagtccagccttatTTTGACCTCTAAAAGGCCCTTATAAAGTGCACAAA
GAATTTTATCAATGATAATGTGTTTCTATAACCAATacaacaaagggttt
tttcgattttagaaaTCAGCCAAAGGAGAAGAACTAGTCAATAAAGTAGC
TCAAGAACTTGATGTGAAATCGAAAGATTATGTTGGTCTCCTTTTCAATA
ATGGAACAAGGGTAagattttcagaatattttccTATTGTAAAAAGCTTA
ACATTTTcaggataatttttttcattttaccaTGCACAGGAGTACCTTtc
cagaaaattattttgataaacttattttatttttcagcaatGGTTGGATA
TTCATAAAGATATGAAACATCAGTTGGGAGGTTGGTACTTCTTCAGTttt
gtttttggaattttttttagtgaaaatctttaaattatGCATAACTTGCC
CATTTCATTTCTCTTTATGAATTATTTAGCAAGGAAGAGGTGTTTTCAAA
TgtgctttttatttatttcagatTCTAAAGCAGAATTTTTATTTCGGGTC
AAATTCTATGAGCCTGAGCCCAGCAAAATTCAAGAAGATCATTTAAGGTT
TGTTATTTGTTTTCCCCTTTCtatacaaaaatgtttttgtttgaccCAGC
TTTATATTTTTTGCTCAAGTCTCAATATATTGACTGAATTATTTACTCAA
tgcaaattcaaattcaaaaacaaatgttttttattccttttaatgatttt
agtgaaacaggtttttaaattttggaattcttttgaaacccattaaattt
ttgtgttttcagATATTTACTTTATCTCCAGATTAGAGAAGATTTATCAG
AAAAAAGGTAAATAATGTTTATCTAGTTAACAAATTGTGTTGGTATAGGT
TTCCATGGAGAAGTTGGATTACAGCTTATTctaattaatgtaattaaagt
ATATCCTTTAATCATCAAAATTACTTGGCACTTAGCAGCCATATTATTGA
TTTTAAtgacatcatttttttctttaagattAAAATGCACAGAAGAAGTA
ATTGCTCAACTTGGTGCATATACTGCACAAggtaaatttgttttaaaacc
tTTGGCAATGTGTCATTATTTAATGTTTGTTTTTAGTCAATTGCACCCTG
TCAACCAAAGTTTAAAAGTCTTAACTgatatttttcaacatttaaaaaat
tgagattcCAATACATATATAAAAGTATTTACTTGGGATAGTTAAGTCAT
GTTTATTAAAacttatttgaaatttcaattgatattttttcagcTGAAGT
AGGAGACTTCAATTTATCAGAGCATGAGCATGATTACTTGAAAGATTATG
AGTTTGCTGAGGTAAGTAAAGTCTATACCAACAAATAACATGATTCCTTA
AGCTGAAATCACCCTAAAGGAACTCTTTAAtgaaaaagtcattttcttAC
CATAGAATACCGATATACTTGAAAGAATCAATTTATTGCACAAACAACAC
AGGtattcattttcttcatttttgattcAGTTCCAACCTTCTCTTGTACT
TTTTTCACTGGATAATGCAATGGATAGATGGATTTTACTTAAACTTCGCA
TAAATGTCTTCATAATAATTACTCTTACTTTTTTATTTAGGGGTCAAACA
CCTTTACAAGCTGAACTTAACTTTTTGGAAATTGCCAAAAAGATTCCTAG
ATATGGAGTGGACGTACATGATGCCATGGTAGGTATTTTAAGAACAAAAT
GAAGTTTAAGCAACCCAAACAACCTTTTAATGTCTTAAATGTAAGCTTAT
GTTCAAATATTGAATGTTCTTTTTTTGTCTTTAGGATACCAATGGGCATG
TAGAGATTGGTATTGCTGCTTTAGGAATAAACATCTATCGGGATGGAAAG
CGTGAACAGCTTTTCAGATGGCAAAATATGCATGACTTCAATTACAACCG
AAGAAAATTCACCATTAAACTCAAACAACCAGTGGTACGTATGCTTTTCC
TTTAGCTGAAAGTAATTCTATTTTAATTTTGTAAAGCGTCACAtgtttct
aaaatattcagtaattttaaatgttttatttcaGAGCGACAATGACAATA
AGAAGAATTACGTATATTATTTCGAATCTGCTAAAAGCTGCAAACAATGC
TACAAAGTGGCTGTTGAATATCATTCTTTCTTCCGATTGACAAGACCTGA
TGCTCCACGAAAACGTGCTGACACCTTGAAAATGGGATCTAGCTTCAGAT
ACAggtataaaaaattgttttcacaaaatatttatttcaccACTAACTCC
ACTTCTATCTCAACTAAAGTGAAAACATTGTCACTAAATCACTCAACTCA
ATTTTTATGTTTCTAAATTAGAAGGTTGATTTaatgcatgttttttttat
aacaacatccaaaaaattttaagccttcggaatcggatgttcttaacttt
ttcatttttaagcctaagaatgttcttaaaatcttcttaatttctacatt
ttttgagtgtttttgtgcaattttgaaagaaatcgagtgttttagagccc
atgaagccttaaaatgttgttaACTTGTTCTTACTTAACACTTTGGTCAT
CGAATATGTTCTtatcttatatagtttgttcttattaaaaaagcgtgtat
gttcTTTCTTTTCAGTGATCGAACCTTGTATCAACTGAGATACCAAAAAG
GTGATGAAGCACCTAAAAATGCTGCCAACTTCAAACGAACGCCAAGCACA
AGGAAGACATTACCTCCTTCTTACAAAACACCGTTGATTGAACCTGAAGT
GCCATTCATTGAACCAACTAAAGGTAGTTTATTCTTCTTTGGAAATGTAA
ATTAATGCTTATTTCTGGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTTGTTTTCTTTAAGATTAAAATGCACAGAAGAAGTAATTG
CTCAACTTGGTGCATATACTGCACAAggtaaatttgttttaaaacctTTG
GCAATGTGTCATTATTTAATGTTTGTTTTTAGTCAATTGCACCCTGTCAA
CCAAAGTTTAAAAGTCTTAACTgatatttttcaacatttaaaaaattgag
attcCAATACATATATAAAAGTATTTACTTGGGATAGTTAAGTCATGTTT
ATTAAAacttatttgaaatttcaattgatattttttcagcTGAAGTAGGA
GACTTCAATTTATCAGAGCATGAGCATGATTACTTGAAAGATTATGAGTT
TGCTGAGGTAAGTAAAGTCTATACCAACAAATAACATGATTCCTTAAGCT
GAAATCACCCTAAAGGAACTCTTTAAtgaaaaagtcattttcttACCATA
GAATACCGATATACTTGAAAGAATCAATTTATTGCACAAACAACACAGGt
attcattttcttcatttttgattcAGTTCCAACCTTCTCTTGTACTTTTT
TCACTGGATAATGCAATGGATAGATGGATTTTACTTAAACTTCGCATAAA
TGTCTTCATAATAATTACTCTTACTTTTTTATTTAGGGGTCAAACACCTT
TACAAGCTGAACTTAACTTTTTGGAAATTGCCAAAAAGATTCCTAGATAT
GGAGTGGACGTACATGATGCCATGGTAGGTATTTTAAGAACAAATGAAGT
TTAAGCAACCCAAACAACCTTTTAATGTCTTAAATGTAAGCTTATGTTCA
AATATtaaatgttctttttttgtCTTTAGGATACCAATGGGCATGTAGAG
ATTGGTATTGCTGCTTTAGGAATAAACATCTATCGGGATGGAAAGCGTGA
ACAGCTTTTCAGATGGCAAAATATGCATGACTTCAATTACAACCGAAGAA
AATTCACCATTAAACTCAAACAACCAGTGGTACGTATGCTTTTCCTTTAG
CTGAAAGTAATTCTATTTTAATTTTGTAAAGCGTCACATGTTTCTAAAAC
ATTCagtaattttaaatgttttatttcaGAGCGACAATGACAATAAGAAG
AATTACGTATATTATTTCGAATCTGCTAAAAGCTGCAAACAATGCTACAA
AGTGGCTGTTGAATATCATTCTTTCTTCCGATTGACAAGACCTGATGCTC
CACGAAAACGTGCTGACACCTTGAAAATGGGATCTAGCTTCAGATACAgg
tataaaaaattgttttcacaaaatatttatttcaccACTAACTCCACTTC
TATCTCAACTAAAGTGAAAACATTGTCACTAAATCACTCAACTCAATTTT
TATGTTTCTAAATTAGAAGGTTGATTTaatgcatgttttttttataacaa
catccaaaaattttaagcTTTCGGAATCGgatcttcttaactttttcagt
tttaagcctaagaatgttcttaaaatcttcttaatttctacattttttga
gtgtttttgtgcaattttgaaagaaatcgagtgttttagagcccatgaag
ccttaaaatgttgttaACTTGTTCTTACTTAACACTTTGGTCATCGAATA
TGTTCTtatcttatatagtttgttcttattaaaaaagcgtgtatgttcTT
TCTTTTCAGTGATCGAACCTTGTATCAACTGAGATACCAAAAAGGTGATG
AAGCACCTAAAAATGCTGCCAACTTCAAACGAACGCCAAGCACAAGGAAG
ACATTACCTCCTTCTTACAAAACACCGTTGATTGAACCTGAAGTGCCATT
CATTGAACCAACTAAAGGTAGTTTATTCTTCTTTGGAAATGTAAATTAAT
GCTTATttctggtttttacacaaaaaattGTGGTTGGAATATATGTCTGG
AGACTGAAGActaaattttcaaatctttttccttTAGTGGCACCACTTGA
AGAAGAACCAGTCCACTATGAAGAAGTACCAGTCCAATACGAAGAAGTAG
AGTTCGATGAAGCCAATCCTGATGATGATAACTTTGATCCtgaggtattt
tttattttggggAGCCTTTCGATGCTATTCTACAGTTTACTACAGTTGAA
TTAGTTCAGTTTTTTTtgctggaaatttttttatcttttcgtTTTATGAG
AAACTTGGATTCATAAGAAACTTGAAGAACTTTTTATTAAATCTTCAAAG
TCATTGAAAACTTTATCACTTTCCTCTAGGAATGGGAAACAGTTGAGAAG
ACGATGCCTGATGGTTCGAAGAAGAAATCCCGTCGACGGGTCATCGTTCT
TAATGTTGTGAAGAAACCAAAGAGTGGGAAATCTCCAGTTGAAGAACCAG
TTCAATATTATGAAGAAGTGGAAGTCGATGAAGCCAATCCTGATGATGAT
AAATTTGATCCTAAGGTATATTGTTAGCACAGAATTTCCTTTTCCGAAAT
CTTCAGTGTGACCTGAAGATCTGGAAAACGAtaagattttgctgaaattt
tgcctACTCTGACatgtcttttttttcctttNCGGATTTGGCTTATATTT
TGCGCACTCTGACATGTCTCTATtcctttttttgcttgagacgAGCTTTG
TACGATAGCTTCGCGTTCTTATCAATTTATAATATACTAAATTTAAGCCC
ATTCGACTATGAAATAAAAAGTTGCCAATGTCTTTCATCTGCTTTCACTG
CATTTTGAACTCAATCAACTTCACTTACTTTCGTCTTCTTCAGGAATGGG
AAACGGTCGAGAATACGATGCCTGATGGTTCGAAGAAGAAATTCCGTAGA
CGTAATATCGTTCTTAATGTTGTGAAGAAACCCAAGAGTGGGAAATCTCT
AGTCGAAGAACCAGTTCAATATTATGAAGAAGTGGAAGTTGATGAAGCCA
ATCCTGATGATGATAAATTTGATCCTAAGGTATCGTTAGCAcagaatttc
ttttttctaaaaacatcGGGGTGACCTGGAGATTGGGGGAACGATCGGAT
TTGGCTTATATTTTGCGCACTCTGACATGTCTCTATtcctttttttgctt
gagacgAGCTTTGTACGATAGCTTCGCGTTCTTATCAATTTATAATATAC
TAAATTTAAGCCCATTCGACTATGAAATAAAAAGTTGCCAATGTCTTTCA
TCTGCTTTCACTGCATTTTGAACTCAATCAACTTCACTTACTTTCGTCTT
CTTCAGGAATGGGAAACGGTCGAGAATACGATGCCTGATGGTTCGAAGAA
GAAATTCCGTAGACGTAATATCGTTCTTAATGTTGTGAAGAAACCCAAGA
GTGGGAAATCTCTAGTCGAAGAACCAGTTCAATATTATGAAGAAGTGGAA
GTTGATGAAGCCAATCCTGATGATGATAAATTTGATCCTAAGGTATCGTT
AGCAcagaatttcttttttctaaaaacatcGGGGTGACCTGGAGATTCGG
AGAACGATCGCATTTGGCTGAAGTTTTGCGCACTCTGACATgtctctatt
tctttttttgcttgagacgAGCTTTGTACGATAGCTTCGCGTTCTTAGTT
ATtgagaaaatattgaatttaagCCCATTCGACTATGAAATAAGTTGTCA
ATGTCTTTCACTGCAATATGAAGTCACTCAACTTCacttactttcgtttt
cttcagGAATGGGAAACGGTCGAGAATACGATGCCTGATGGTTCGAAGAA
GAAATTCCGTAGACGTAATATCGTTCTTAATGTTGTGAAGAAACCAAAGA
TTGGGAAATCTCCAGTCGAAGAACCAGTTCAATATAATGAAGAAGTAGAG
TTCGATGAAGCCAATCCTGATGATGATAAATATGATCCTGAGGTATTTTT
TATTTGGGGAAAGCctttcaatgcaattttacaGGTGACGAGTTCAGTAT
TTTTTGCTGGAATTTTTTACGTCTTTTcgttttataagaaatttttcaaa
atcattttaaactTTCTCATTTTCCTCTAGGAATGGGAAACAGTCGAGAA
GAAGATGCCTGATGGTTCAAAGAAGAAATTCCGCCGACGAATTATTGTTC
TTAATGTTGTGAAGAAACAAAAGAGTGGGAAATCTCCAGTCGAGGAAGAA
CCAGTTCAATATGAACAAGTGGAAGTTGATGAAGCCAATCCTGATGATGA
TAAATTTGATCCTAAGGTATCGTTAGCAcagaatttcttttttctaaaaa
catcGGGGTGACCTGGAGATTCGGAGAACGATCGCATTTGGCTGAAGTTT
TGCGCACTCTGACATgtctctatttctttttttgcttgagacgAGCTNGG
GGGAACGATCGGATTTGGCTTATATTTTGCGCACTCTGACATGTCTCTAT
tcctttttttgcttgagacgAGCTTTGTACGATAGCTTCGCGTTCTTATC
AATTTATAATATACTAAATTTAAGCCCATTCGACTATGAAATAAAAAGTT
GCCAATGTCTTTCATCTGCTTTCACTGCATTTTGAACTCAATCAACTTCA
CTTACTTTCGTCTTCTTCAGGAATGGGAAACAGTCGAGAATACGATGCCT
GATGGTTCGAAGAAGAAATTCCGTAGACGTAATATCGTTCTTAATGTTGT
GAAGAAACCCAAGAGTGGGAAATCTCTAGTCGAAGAACCAGTTCAATATT
ATGAAGAAGTGGAAGTTGATGAAGCCAATCCTGATGATGATAAATTTGAT
CCTAAGGTATCGTTAGCAcagaatttcttttttctaaaaacatcGGGGTG
ACCTGGAGATTCGGAGAACGATCGCATTTGGCTGAAGTTTTGCGCACTCT
GACATgtctctatttctttttttgcttgagacgAGCTTTGTACGATAGCT
TCGCGTTCTTAGTTATtgagaaaatattgaatttaagCCCATTCGACTAT
GAAATAAAAAGTTGCCAATGTCTTTCACCTGCTTTCACTGCAATATGAAG
TCACTCAACTTCacttactttcgttttcttcagGAATGGGAAACGGTCGA
GAATACGATGCCTGATGGTTCGAAGAAGAAATTCCGTAGACGTAATATCG
TTCTTAATGTTGTGAAGAAACCAAAGATTGGGAAATCTCCAGTCGAAGAA
CCCATTCAATATAATGAAGAAGTGGAAGTCGATGAAGCCAATCCTGATGA
TGATAAATATGATCCTGAGGTATGTTTTTTTTGGGGAAAcctttcactga
aatttcaggCAATTTTACAGTTTGCAGGTGACGAGTTCAGTATTTTTGCT
GGAATTTTTTACGTctctttgttttataagaaacttttcaaaatcatttt
aaactTTCTCATTTTCCTCTAGGAATGGGAAACAGTCGAGAAGAAGATGC
CTGATGGTTCAAAGAAAAAGTTCCGCCGACGAACCATTGTTCTTAATGTT
GTGAAGAAACCAAAGAGTGGGAAATCTCCAGTCGAGGAAGAACCAGTTCA
ATATGAAGAAGTGGAAGTTGATGAAGCAAATCCTGATGATGATAAATATG
ATCCTAAGGTATAGTTAGCACAGAATTTCTTTCTCTCTCTCACTTTAAAG
CCAATATTGTGCATCTCCGAGTCATTTGATGTTTTTCAGGTCTCAAACGA
GCCAGGTCTACTCAAAtttacattatttttcaaatatctcCTCTAGGAAT
GGGAAACAGTCGAGAAGACGATGCCTGATGGTTCGAANGTTGTCAATGTC
TTTCACTGCAATATGAAGTCACTCAACTTCacttactttcgttttcttca
gGAATGGGAAACGGTCGAGAATACGATGCCTGATGGTTCGAAGAAGAAAT
TCCGTAGACGTAATATCGTTCTTAATGTTGTGAAGAAACCAAAGATTGGG
AAATCTCCAGTCGAAGAACCCATTCAATATAATGAAGAAGTGGAAGTCGA
TGAAGCCAATCCTGATGATGATAAATATGATCCTGAGGTATGTTTTTTTT
GGGGAAAcctttcactgaaatttcaggCAATTTTACAGTTTGCAGGTGAC
GAGTTCAGTATTTTTGCTGGAATTTTTTACgtctttttgttttataagaa
acttttcaaaatcattttaaactTTCTCATTTTCCTCTAGGAATGGGAAA
CAGTCGAGAAGAAGATGCCTGATGGTTCAAAGAAGAAATTCCGCCGACGA
ACCATTGTTCTTAATGTTGTGAAGAAACCAAAGAGTGGGAAATCTCCAGT
CGAGGAAGAACCAGTTCAATATGAAGAAGTGGAAGTTGATGAGGCAAATC
CTGATGATGATAAATTTGATCCTAAGGTATTGTTTGCACAGAAtttcttt
ctctctctctcacTTTAAAGCCAATATTGTGCATCTCCGAGTCATTTGAT
GTTTTTCAGGTCTCAAACGAGCCAGATCTACTcaaatttacaatattttt
caaatatctcCTCTAGGAATGGGAAACAGTCGAGAAGACGATGCCTGATG
GTTCGAAGAAGAAATTCCGCCGACGAATTATTGTTCTTAATGTTGTGAAG
AAACCAAAGAGTGGGAAATCTCCAGTCGAGGAAGAACCAGTTCAATATGA
AGAAGTGGAAGTTGATGAAGCAAATCCTGATGATGATAAATATGATCCTA
AGGTATAGTTAGCACAGAATTTCTTTCTCTCTCTCACTTTAAAGCCAATA
TTGTGCATCTCCGAGTCATTTGATGTTTTTCAGGTCTCAAACGAGCCAGG
TCTACTCAAAtttacattatttttcaaatatctcCTCTAGGAATGGGAAA
CAGTCGAGAAGACGATGCCTGATGGTTCGAAGAAGAAATTCCGCCGACGA
ATCATTGTTCTTAATGTTGTGAAGAAACCAAAGAGTGGAGATGAGGAGAA
ACCGTCAGAAGTCGACGAAGAACCCATCGAATATGAAGAAGTTGAAATTG
ATGAAGCCAACCCTCAAGATGATCAATTTGATCCAAAAGTAAATAATTGA
TGTGACTTTCTTCAGTTTCTCTTACTTCATTACCTATGCCACATTTTGAC
ATCTTgttttttacaatttcttaacTTAACTTGATACATCACATTTTAGG
CTTCCCAggcagtcacaacttaaccatcttttaattttttttaggagTGG
GAAGTTGTGGAGAAAGAAAAACCGAATGGCGACAAAGTACGCGTCAGACG
GCGTCGTGTCGTCATTTTGAAGATCGTGAAGGAGCCTGAAGATCTGGTGA
ATGAAAATGAAGTGACTGTCGAAGAAATGCCACTCAATGAAAATGCTCCA
ACACAAGAAGATGATGACAAGTTTGACCCTGAGGTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011193XLOC_011193Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019930-exon-sc0000339-1491911889:287939..288081TCONS_00019930-exon-sc0000339-1491911889:287939..288081Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1510915933:287939..288081TCONS_00019930-exon-sc0000339-1510915933:287939..288081Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1575043694:287939..288081TCONS_00019930-exon-sc0000339-1575043694:287939..288081Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1491911889:288451..288549TCONS_00019930-exon-sc0000339-1491911889:288451..288549Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1510915933:288451..288549TCONS_00019930-exon-sc0000339-1510915933:288451..288549Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1575043694:288451..288549TCONS_00019930-exon-sc0000339-1575043694:288451..288549Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1491911889:288676..288718TCONS_00019930-exon-sc0000339-1491911889:288676..288718Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1510915933:288676..288718TCONS_00019930-exon-sc0000339-1510915933:288676..288718Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1575043694:288676..288718TCONS_00019930-exon-sc0000339-1575043694:288676..288718Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1491911889:288860..288935TCONS_00019930-exon-sc0000339-1491911889:288860..288935Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1510915933:288860..288935TCONS_00019930-exon-sc0000339-1510915933:288860..288935Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1575043694:288860..288935TCONS_00019930-exon-sc0000339-1575043694:288860..288935Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1491911889:289151..289195TCONS_00019930-exon-sc0000339-1491911889:289151..289195Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1510915933:289151..289195TCONS_00019930-exon-sc0000339-1510915933:289151..289195Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1575043694:289151..289195TCONS_00019930-exon-sc0000339-1575043694:289151..289195Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1491911889:289367..289419TCONS_00019930-exon-sc0000339-1491911889:289367..289419Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1510915933:289367..289419TCONS_00019930-exon-sc0000339-1510915933:289367..289419Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1575043694:289367..289419TCONS_00019930-exon-sc0000339-1575043694:289367..289419Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1491911889:289632..289699TCONS_00019930-exon-sc0000339-1491911889:289632..289699Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1510915933:289632..289699TCONS_00019930-exon-sc0000339-1510915933:289632..289699Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1575043694:289632..289699TCONS_00019930-exon-sc0000339-1575043694:289632..289699Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1491911889:289794..289840TCONS_00019930-exon-sc0000339-1491911889:289794..289840Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1510915933:289794..289840TCONS_00019930-exon-sc0000339-1510915933:289794..289840Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1575043694:289794..289840TCONS_00019930-exon-sc0000339-1575043694:289794..289840Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1491911889:289979..290066TCONS_00019930-exon-sc0000339-1491911889:289979..290066Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1510915933:289979..290066TCONS_00019930-exon-sc0000339-1510915933:289979..290066Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1575043694:289979..290066TCONS_00019930-exon-sc0000339-1575043694:289979..290066Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1491911889:290173..290322TCONS_00019930-exon-sc0000339-1491911889:290173..290322Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1510915933:290173..290322TCONS_00019930-exon-sc0000339-1510915933:290173..290322Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1575043694:290173..290322TCONS_00019930-exon-sc0000339-1575043694:290173..290322Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1491911889:292518..292687TCONS_00019930-exon-sc0000339-1491911889:292518..292687Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1510915933:292518..292687TCONS_00019930-exon-sc0000339-1510915933:292518..292687Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1575043694:292518..292687TCONS_00019930-exon-sc0000339-1575043694:292518..292687Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1491911889:293098..293255TCONS_00019930-exon-sc0000339-1491911889:293098..293255Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1510915933:293098..293255TCONS_00019930-exon-sc0000339-1510915933:293098..293255Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1575043694:293098..293255TCONS_00019930-exon-sc0000339-1575043694:293098..293255Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1491911889:293376..293482TCONS_00019930-exon-sc0000339-1491911889:293376..293482Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1510915933:293376..293482TCONS_00019930-exon-sc0000339-1510915933:293376..293482Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1575043694:293376..293482TCONS_00019930-exon-sc0000339-1575043694:293376..293482Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1491911889:293668..293853TCONS_00019930-exon-sc0000339-1491911889:293668..293853Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1510915933:293668..293853TCONS_00019930-exon-sc0000339-1510915933:293668..293853Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1575043694:293668..293853TCONS_00019930-exon-sc0000339-1575043694:293668..293853Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1491911889:296422..296607TCONS_00019930-exon-sc0000339-1491911889:296422..296607Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1510915933:296422..296607TCONS_00019930-exon-sc0000339-1510915933:296422..296607Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1575043694:296422..296607TCONS_00019930-exon-sc0000339-1575043694:296422..296607Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1491911889:296761..296946TCONS_00019930-exon-sc0000339-1491911889:296761..296946Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1510915933:296761..296946TCONS_00019930-exon-sc0000339-1510915933:296761..296946Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1575043694:296761..296946TCONS_00019930-exon-sc0000339-1575043694:296761..296946Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1491911889:298179..298376TCONS_00019930-exon-sc0000339-1491911889:298179..298376Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1510915933:298179..298376TCONS_00019930-exon-sc0000339-1510915933:298179..298376Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1575043694:298179..298376TCONS_00019930-exon-sc0000339-1575043694:298179..298376Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1491911889:298533..298726TCONS_00019930-exon-sc0000339-1491911889:298533..298726Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1510915933:298533..298726TCONS_00019930-exon-sc0000339-1510915933:298533..298726Clytia hemisphaericaexon
TCONS_00019930-exon-sc0000339-1575043694:298533..298726TCONS_00019930-exon-sc0000339-1575043694:298533..298726Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000339supercontigsc0000339:287939..298726 +
Expression
No biomaterial libraries express this feature.
Blast
[Close]
BLAST of TCONS_00019930 vs. Swiss-Prot (Human)
Match: E41L2 (Band 4.1-like protein 2 OS=Homo sapiens GN=EPB41L2 PE=1 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 9.659e-69
Identity = 141/351 (40.17%), Postives = 207/351 (58.97%), Query Frame = 3 
Query:   33 NSSAAETNSKKSKKKSGPQYECVITCLDGSVINTSVEKSAKGEELVNKVAQELDVKSKDYVGLLFNNGTRQ--WLDIHKDMKHQLGDSKAEFLFRVKFYEPEPSKIQEDHLRYLLYLQIREDLSEKRLKCTEEVIAQLGAYTAQAEVGDFNLSEHEHDYLKDYEFA--ENTDILERINLLHKQHRGQTPLQAELNFLEIAKKIPRYGVDVHDAMDTNG-HVEIGIAALGINIYRDGKREQLFRWQNMHDFNYNRRKFTIKLKQPVSDNDNKKNYVYYFESAKSCKQCYKVAVEYHSFFRLTRPDAPRKRADTLKMGSSFRYSDRTLYQLRYQKGDEAPKNAANFKRTPSTR 1070
            N   AE  S+K  KK+    +C +T LDG+  +  +EK AKG+ L +KV + L++  KDY GLLF     Q  WLD  K++K QL +    F F VKFY P+PS++ ED  RY L LQ+R+D++  RL C+    A LG+YT QAE+GD++  EH    L +++FA  +  ++ E++  LHK HRG +P QA+  FLE AK++  YGVD+H A D+ G  +++G+ A G+ IY+D  R   F W  +   +Y R  F IK++ P      +    +   + ++ K+ +KV VE+H+F+RL  P+ P K A  L +GS FRYS RT  Q R Q      + A +F+RT S R
Sbjct:  200 NELKAEKASQKVTKKT-KTVQCKVTLLDGTEYSCDLEKHAKGQVLFDKVCEHLNLLEKDYFGLLFQESPEQKNWLDPAKEIKRQLRNLPWLFTFNVKFYPPDPSQLTEDITRYFLCLQLRQDIASGRLPCSFVTHALLGSYTLQAELGDYDPEEHGSIDLSEFQFAPTQTKELEEKVAELHKTHRGLSPAQADSQFLENAKRLSMYGVDLHHAKDSEGVDIKLGVCANGLLIYKDRLRINRFAWPKILKISYKRSNFYIKVR-PAELEQFESTIGFKLPNHRAAKRLWKVCVEHHTFYRLVSPEQPPK-AKFLTLGSKFRYSGRTQAQTR-QASTLIDRPAPHFERTSSKR 546
The following BLAST results are available for this feature:
BLAST of TCONS_00019930 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
E41L29.659e-6940.17Band 4.1-like protein 2 OS=Homo sapiens GN=EPB41L2... [more]
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