TCONS_00020223 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020223
Unique NameTCONS_00020223
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3938

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020223 ID=TCONS_00020223|Name=TCONS_00020223|organism=Clytia hemisphaerica|type=transcript|length=3938bp
ACCGTTTTAGTTGGATTCAAGGATTGTTTgtcacttttttgtttttatcc
aaCGACTCACAAAAGTATGCTTTATTTTATATGATCGCACACCTCAGGGA
TTCAGGTGTGTGCGGAGGCGTGCGTGTGTCACATCTCAAATGATTCTGCC
TGAGTTCTCAATAAAATCCCAAATCATATGAGCTTGTCTCTAAACAAAAT
AGATTTGCTCTGATCAAAGCAGTTTTTCTGTAAATGCCATTAGTATTTTG
TAGTCCCTACACTGTGATTCTTTAAGTATTTTAAtgttcctttttctttc
tctaaaGAACCATGAAAAATGTCAGAGCGGAGGTCACTGAGAGCACGTTT
CCGTGTGTGTTGTGTGAGAGAATGTGATAATGGAGATAAGGAATTAACAA
AGTGGAAAGAAGAACCTTGCCTTATCCATCAAAAAGTTCATCGCAGTTGC
AAATGTGACCCTCCTTTTGAATTATTCACATTTCCAACCATTCGTGGGAA
TCCCAAACAACGAAGAAAATGGGTCAGACTACTAAATAGAGCAGACACAA
GAAAAGGAGAACCATGGGCACCAGGTCCTCTAGGAAGAGTTTGTTCTCTG
CATTTTGTCGATTCGCAACCAACAGAATCAAATCCTTTGCCAACATTGGA
TCTAGGATATGACAGTGCACCAATACAGAAAGAAATCGAGATGGAGTTGA
AAGTCAAAGAAGAAGCAACAGATGAAGAACTCGATTCTGAAGAAGATGTA
AAGCCagaagaaaataatgatttGGCTGAGAAAGACAAAAGCTTAGCTGA
GCCAGAAAGAGAGGTGGTTGTGCTAGATATTGATAAAACACCAGAGGAAG
GAAAACGACTGCAGGATAAGGATGGTGAAGAATCAGGAGATGTTGTTGGG
CCAAATGTCAGCGAAAAAGAGNGCCAGAGGAAGGAAAAAGACTGCAGGAT
AAGGATGGTGAAGAATCAGGAGATGTTGCTGGGCCAAATGTCGGGGAAAA
AGAGTCGGAGGATGCAGAAATTTTAGAGGAAGATTTCCTCATGAAAGCAA
TTGGTGGTACATttcaagAAGACTCAATAGACGAAGAGGATGGtattgac
tgcattgatattgATTTTGATGACGGTGATGGTGATGCATTTATTCATCA
AGAACCAGAGCTGGCGATGGAAAGTGAGGAAGCGTCACCGGCTGCTGATA
TACCGCAAGAACACGCTTCTCCTGAAAAAGCTGCACTGCACACTGCTGCa
agtgaagatgaagaagaagaaaattttggaTTAAAAGACATCAAAATTGA
AGTCATTGACCCTTCCTATGCTCACTTCTCTGGAACAGACACAATTGACC
AATCACAAACGGAATCCAACGATGACTCATCTAATTTACTTGGTAGTAAG
TTTGaggaaatttccaaaaaatgttcacGCTCTCTCAACAAACCTTGTCA
TTGTGAAAACTGTCAAGTTCTGATGGACACTTATAAAGAATTTGTGCAAA
ACCGACTGAAAGAATCAAAATCACCAGAGCCAGGACCTGCAAGCTCAAAG
AAGATTCGATTAGCAGAATCACCAGGAGCACTCATCAGAAATTGTCAGAA
GTGTGGCATCGATTTCCCTTCATATGAACTCTACAAGGAACATGTTAGGA
CCGAACATCCTATTTACTGGAAACACATTCAGTTAGAATctgattttaaa
gaaaaaagaaaacttattgTCATGGAAGCCAAGAAAGAACCCCAACcgtc
caaaacaaactttttcaaaaaacaattagCACGTCAAAGTCAAGTACCCA
TCCAATCCAAAGTCAAAGTCAAAGCTGCCAAACCTCTTGTACCGCCTTCT
ATGCCTACCATGGTACCAACTATGGTCCCTCCACCTGGTATGGTAGCTCC
CACCATGCTCCCTCATGGAATGATGCCTCAAGCAGGTATGGTACCCCAAC
AAGGCATGGCACAACCAGGTATGGTCCCTCAGCCAGGAATGGTTCCTCCA
GGAATGATGGTTCCAGGGCCTCCTGTTGCTACAAGTGAAAAGGACGGCGC
TAACCCTGTCACATACTTCTACCCCATGCTTTACCCAGTGTACTTTGTTA
TGGACAAGGAcggaaagaaaaagagaaaaggtCAACCTGTTCCTGTACCA
ATGGCTATGCCTCAAATGCCACAAGGGATGCCACCTGGCCCTATGATGGT
TCCACCACAATTTGTGAATATTGCACCCAAAAAGCGAAAGAAGCCAGAGA
AGGTGGCGTGTGGGGAATGCGGCTTAACGTTTCAATTTAAAGAGGAATTG
ATGCTTCATATGAGGATCCATTCAGATAAACCCTACAAATGTGAAACGTG
TCAATTATCTTTCGTGAACAATGTAGAATTGAAAAGACACTATCGCACGC
ATTCTTCCTTCAGTTGTATTCAGTGCAACGAATCTTTCACCACTCATAGT
CATTTACAAGAACACGAGAAATCGAAACATGGTGCTGAGCCATTACTTCC
AGACAGTAAGAGTAAGCCAATGACTTGCAACACGTGCAAGATGTCTTTCT
CGAATAATGTTGAATTGAAACGACATTATCGAACTCACGCTTTCTTCAAG
TGTAAATTTTGTAGTGAATCGTTTGTGTCTTGGGAACAGCTCGTTCAACA
CTCTGCTAACGTTCATTCGAAAGAAGAGACACCTTCGACACCTTCGACAC
CTTTGAACCAATCAGATGAGACGATCGATGAGAAACAAAGTAATGACACC
AGCGAAGACAGTGAGAACGTTGTCGGCGAAGAAGACTTCACTTGCTACCA
TTGTAGTAAATCCTTCCCAACCATGGATATCTTACAAAAACATTTGAAGG
TACATTCCATTAAACAGGAACCTGCCGACGAGCCAGGTCCTTCATCCTCT
CTTCCAGAAGGGGCCAACCAGGTGGTGATCATACCTCCTCCTTCACAAGT
CGTCTTTATGAACCCAACAGGTCATCTACCACCAGGAATCACTCAACCTG
GTATACCTTCGGCTGGTATGATGCCCCCTGTTGTTAATCAACCTCCGACT
ATGGAGGCAGTAACTTCTTTTGCAACAGACATTAAAAAGGAACCATTAGA
TTATGACGAAATTGACGAACAACTGGAGGAGCCGGATGAAAGCGcaacca
aaaacaaacattACGCTTGTAACCAATGCGGCGCCATGTTTAGCCGCATG
TTCAGCCTAAACCGCCACAAGCGCATCCACACTGGTGAGAGAGGGTACAA
GTGTGAAATATGTGGCGCCTGTTTCAGAACGCAATCGCAACGTAAAACGC
ATTCATTCACACACACCGGTGAACGACCCTTCAAATGTCATTTATGTCCG
GCAACTTTCATCCAACAAGGGAATTTGAAACGTCACATTTGGACGCACAC
TGGTGAAAAACCTCATGTTTGTAATATGTGTAATGCTGGTTTCCTCAGCA
CTTCAGACCTCAAGAGACATATCCGGACACATACCGGTGAAAAACCGTAT
AAATGCGGACATTGCAATTGTTCTTTTACGACGTCAGGAAACTTGAAATC
TCACATGAAAACGCATGTTAATTCTGGTCATCCTGGTATTGTCGCCATGT
AATtatcctttttttaatttttggtctTTGGACCTTTGTCTTATTTTAAT
TAGTATCTCTAACGGTATTTTTATACATAGCTCAGGAGTGAttattttaa
acatatttttagTTCTTTTGTATTGTATGAAACGTAATTTTTATACTATA
TGCACTTATTTTTCTGTTGgggattgatttttttttattttcttactaTA
CTAATTTTTAGTAACTTTTGGAGGTTAATTTTTGGTTAAAGTTTTAAGGG
TTATTTATGATCACAGCTAGCAAAACTGAAATTTGCATGGTTATAAAACC
ATTGTGTTGGTTGTACTGTTTCGTCAGTCAAAATATAA
Run BLAST on NCBI

protein sequence of TCONS_00020223-protein

>TCONS_00020223-protein ID=TCONS_00020223-protein|Name=TCONS_00020223-protein|organism=Clytia hemisphaerica|type=polypeptide|length=853bp
MKAIGGTFQEDSIDEEDGIDCIDIDFDDGDGDAFIHQEPELAMESEEASP
AADIPQEHASPEKAALHTAASEDEEEENFGLKDIKIEVIDPSYAHFSGTD
TIDQSQTESNDDSSNLLGSKFEEISKKCSRSLNKPCHCENCQVLMDTYKE
FVQNRLKESKSPEPGPASSKKIRLAESPGALIRNCQKCGIDFPSYELYKE
HVRTEHPIYWKHIQLESDFKEKRKLIVMEAKKEPQPSKTNFFKKQLARQS
QVPIQSKVKVKAAKPLVPPSMPTMVPTMVPPPGMVAPTMLPHGMMPQAGM
VPQQGMAQPGMVPQPGMVPPGMMVPGPPVATSEKDGANPVTYFYPMLYPV
YFVMDKDGKKKRKGQPVPVPMAMPQMPQGMPPGPMMVPPQFVNIAPKKRK
KPEKVACGECGLTFQFKEELMLHMRIHSDKPYKCETCQLSFVNNVELKRH
YRTHSSFSCIQCNESFTTHSHLQEHEKSKHGAEPLLPDSKSKPMTCNTCK
MSFSNNVELKRHYRTHAFFKCKFCSESFVSWEQLVQHSANVHSKEETPST
PSTPLNQSDETIDEKQSNDTSEDSENVVGEEDFTCYHCSKSFPTMDILQK
HLKVHSIKQEPADEPGPSSSLPEGANQVVIIPPPSQVVFMNPTGHLPPGI
TQPGIPSAGMMPPVVNQPPTMEAVTSFATDIKKEPLDYDEIDEQLEEPDE
SATKNKHYACNQCGAMFSRMFSLNRHKRIHTGERGYKCEICGACFRTQSQ
RKTHSFTHTGERPFKCHLCPATFIQQGNLKRHIWTHTGEKPHVCNMCNAG
FLSTSDLKRHIRTHTGEKPYKCGHCNCSFTTSGNLKSHMKTHVNSGHPGI
VAM
Run BLAST on NCBI

transcript from alignment at sc0000350:233699..244598-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020223 ID=TCONS_00020223|Name=TCONS_00020223|organism=Clytia hemisphaerica|type=transcript|length=10900bp|location=Sequence derived from alignment at sc0000350:233699..244598- (Clytia hemisphaerica)
ACCGTTTTAGTTGGATTCAAGGATTGTTTGTCACTTTTTTGTTTTTATCC
AACGACTCACAAAAGTATGCTTTATTTTATATGATCGCACACCTCAGGGA
TTCAGGTGTGTGCGGAGGCGTGCGTGTGTCACATCTCAAATGATTCTGCC
TGAGTTCTCAATAAAATCCCAAATCATATGAGCTTGTCTCTAAACAAAAT
AGATTTGCTCTGATCAAAGCAGTTTTTCTGTAAATGCCATTAGTATTTTG
TAGTCCCTACACTGTGATTCTTTAAGTATTTTAATGTTCCTTTTTCTTTC
TCTAAAGAACCATGAAAAATGTCAGAGCGGAGGTCACTGAGAGCACGTTT
CCGTGTGTGTTGTGTGAGAGAATGTGATAATGGAGATAAGGAATTAACAA
AGTGGAAAGAAGAACCTTGCCTTATCCATCAAAAAGTTCATCGCAGTTGC
AAATGTGACCCTCCTTTTGAGTAAGTAATTTATTATCTGTTAGTTCAAGT
AATCTTGCATTCAATCAATACCATCTTCTTGAGGGCTGATTTGAAACTAG
AAAATGATTAATGTGACTGATATAGAAATTTGAACAAATTTTGATACAAA
TGTGAAGACTTTATAAACCTTTTTCAGTTGATTTTTGAAAAGGAGGCTCG
CAATAGTCCTATGCATTTTAATAAAGAGTGTTTGTACACCTACATGATCA
ACCCAATCAAACTCAATATGTCTGGAGATTTTGGAAACTGATGATATGTT
AAAATGTTTCACTTTTTTTGTTTTCTTAGAGCTTTAAGAAATCATTTGTG
ATTGATTGTTCTAAAAATTTCTCCATACTATAGATTATTCACATTTCCAA
CCATTCGTGGGAATCCCAAACAACGAAGAAAATGGGTCAGACTACTAAAT
AGAGCAGACACAAGAAAAGGAGAACCATGGGCACCAGGTCCTCTAGGAAG
AGTTTGTTCTCTGCATTTTGTCGATTCGCAACCAACAGAATCAAATCCTT
TGCCAACATTGGATCTAGGATATGACAGTGCACCAATACAGGTCCGTAAT
TGTTCTCCAGTTTTGGTAATGTCTACTAAAATATGGCTTTCCTTTTTAAC
TTTCCAAAATTAATGAAATTTTTCTAGAAATTAGAATTGCAGACCTATTA
TTTAGACCTTTTTATGTGAAGACTTTAATTTTTTTTTCCCCTTGTTTAGA
CGATAACCATGAATCTCATTGTAACTTTTTCAGTTAATGATCATGAACTG
AGACTTGCCTAGGTTGATAAAAGGGATTTTTTGCGTCAAAAATAAAAAAT
ATAACTTTTTGAATGATTTTTTTGAAGCCTCTGTACGAGATTCACTGAAA
AATGACGAAAATCATGGAATCTTGGATATATTCAACTCAAATGAATTGTT
TGGAATAAATACTAGGTTTTTTTTGGAAATATTGATAAAATATTTGTAAA
AAATTTATTTCCAAGCTGTAAAACCGGTTTTCCAGCTTGAAAACAGGCCT
AAAACACATACTTTTTTATCGGAATTTTTGATCCTTTTTTTCTCTTTCAT
GCTTATAGATCACATGGGTTTTTTTTCACTTTCTGAAAATACAATTTTTG
GTTTTGCCCAAAATTAGTCGCAACTCTGAAAAATTTGAGCCGGATTTGCT
ACTTTTTGAGTTTGGAGCTGCCTTTCAGGGCTGCTAGAGCCCAGTCTACT
TAAAAAAAAAATTCAAAATTGCTTAAATCTGCTGTCATAAAGTTGCTCAA
CACATCTCCACAAAGAAATTTGGCCCAAAAAAGTCCTGGGCTGAGTAATG
GCACCTTAAAAGATGGCTGAAATGGATTTTGGAGTGTTTTTAAGCCGCCA
TTATGGAATTTGCGTTTAAGGTCACATGGGTTTTTTTGTTTTTTTTGGAA
TCACAAATTGGTTACTTCAATAAAATTAATAAAAACCCATGTGATCTTAG
TTGCAACTTGAAAAAATGCCTCTTAAAGTTGTAACAAAAAAAACGGCGAA
AAAATTTTGGATTGGCTGTAAATCCGCCATTATGGATTTTGGGGACCTGA
AATTTTGGGATTCTGAGTTTTTCACTATTGTCTACCAAATATCCAAAAAT
GAAGGAATTTAAATTTTTCTACTATCAAAATTATCCAAAACTGCCTGGTT
CTTACAGAAAATGGCTCTTTAACAAGGCAACTATTTCATTTAACTTTTCA
GAAAGAAATCGAGATGGAGTTGAAAGTCAAAGAAGAAGCAACAGATGAAG
AACTCGGTTTGTCAATTTTTGCAAGCAGGGCTTTTTTAAAGTCTGCCTAC
TACAAATGTACAATACTTTCAGTACAGTTCCCCCGATCATACATAAAGCT
TTAGCTTACTAATTACTGTACCTTTCATATTCTGCTTTGATTGATTTGCA
ATTTTATAGACATTTGAAGCGAAACTCATAAAGGCTGCAAGAGTCTCTAA
AAAGAGGTCGTTGTAAAACATGGATTAGCTCCATGGAGTACTCCGATGGA
GTACCTAATGGAGTACCCCCAAAAATACATATATCAGAGCGATGAATATC
ACAAATTTGATAATCAACCTTTTCCACCAGCTGTAAACTGCCAATCTATA
GCAATCAAAAGAATTTCCAAAGTATTTGTTTGTGAAAAATGGCTACCATT
TCTGGCAGTAAAGCTCATATAGTGCATGCTCTCTGCTTAAAAATCTTTGT
TGATTCTACAATTAAACAGACCAGATTTAGCTTACAGAATAGCAGTTGGG
GACAGTCTGTGAGAGAGGTTACAGAGGGGTTTTAGAGCATTAATTATTCA
TTGTAATTTTATTGACAAAATACACTTCAATTAGCGAGGTTAAGCAAGAA
GCTATCTATTACGTACGGAATCTATTACGTGAGTTTTTCGCAGGCTAGCG
CCCAAATCTCAAGGCTAACTCTGTCCCGTGNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGT
GGAAACTATGATGCATACAAACAAAGTGAAAGAATTTATTGCTCAAAAGA
AGGTCAAGATGTAAGTGTAATTAAATAACCTTTGCTGACGTTTTTATCAA
ACCAAAACAAACAGAAAGTTTCTTTCTGGATCTTTTTGTCTGTTTGTTTT
TCGTCTGTTTTTTATTTTATTTTTTTATGCTCTCAAAGTCCAAATACTTC
CAAAATGACCTTTACAATTAACAGCATGTAACCATATTTCTTTTTCATGT
TTTTTAGTGTTTCTGTGGTGCCACCATCAAGTGCGAAGAAGCCAAAGTTA
TAATGTCACCCACCCAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNGAATTCTTTATTTATTGTTCCAATTT
CAACTGCTACAACTAAGCAACGAGATTCAATTTCTGCTCTCCATCATCAA
CCATATATTGTACGTACAAATCAGCCTCTGCTGAGTAAGAACCTGATGTC
ACACAACCGCTGAACTTCAAACCGTTCTCAAAAATTATATAAAGCTCTAT
CTTCTGGACAACCGCTACTGCTTTAAGTTCTCNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNAAATAAAATTTTATAAGTTGGGGCCGAAAGTGAGATACGGAAAAATA
AACATTACGTCATACGTCATAGATCGCCTTTTTGCTTAACCACTTTTTTT
TCTATGCCGTTAAGATTTAGGAATCAGGCTAAAACGCCTCGGATCCAGTC
TAAAAACTCACGTAATAGATTCCGTACGTAATAGATAGCTTCTTGCTTAA
CCTCGCTATTAACAAAATAATAAGACAATCACAATAAATGGAGTCTGCCA
ACTTATTTCTTTGATATAAGAATTTCATACTCAATGGGATGCAGATGGCA
TGAAAGTATATAAAAAGAGACCATTCAGAAAGCAACATTTTTGCTACAGA
GTGGTTTTAGAGCAAATACAAAATTATACAGGTCTTTATTTTCCTCTCGT
GGCTATCTGAAATCTGATCTGCAATATTTTTAGAGTACTCCAATAGGTAC
TCCATTGGAGTACTCCATGGAGCTAATCCATGTTTTACAACAACCCCTAA
AAAAGTCGAACTCTAAATTCAATTCCAATGAGCTAACGTTTTTTGGACCT
ACCCCGGTGGGGTGGAGGTCCTATAAATTAACCCGTGTTCGTTAGTTAGT
TAGTTACCAACTTTTCTCGAGATTGGCTCATTCAATATTTCTGATTTTTT
GCACAAAGGTGCATTACTATGAACCCTCGAATGTGACGGAGCCCGATTTT
CGAAAAAAAAATTTTCCGGCCGGTAGAACCGGAAATNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTATTTCTAAAA
AAGGGATGTCAGTGAACATGAAAATATTGAAATCTTTTCATTCATAACAG
ATTCTGAAGAAGATGTAAAGCCAGAAGAAAATAATGATTTGGCTGAGAAA
GACAAAAGCTTAGCTGAGCCAGAAAGAGAGGTGGTTGTGCTAGATATTGA
TAAAACACCAGAGGAAGGAAAACGACTGCAGGATAAGGATGGTGAAGAAT
CAGGAGATGTTGTTGGGCCAAATGTCAGCGAAAAAGAGNGCCAGAGGAAG
GAAAAAGACTGCAGGATAAGGATGGTGAAGAATCAGGAGATGTTGCTGGG
CCAAATGTCGGGGAAAAAGAGTCGGAGGATGCAGAAATTTTAGAGGAAGA
TTTCCTCATGAAAGCAATTGGTGGTACATTTCAAGGTAAAAAAAATTAGA
AAGGATGGATGGAATCCATGTGAAGACATGCAAAAAGAAAATGTTTTAAT
AATTTCTATGTTTTCTACATTGTGATTCCTATGGCAATTTCAGTTATTTT
ATCATATAACTTTTTACATGATTCAGATTCGTAATAACTTCGTTTTTTAG
CATACATACATCTATAGTTATAGAATCTGTTGGCTTTAGATGTATATTAA
CTAACTCACAACTTTTCATTGTTTTCCAGAAGACTCAATAGACGAAGAGG
ATGGTATTGACTGCATTGATATTGATTTTGATGACGGTGATGGTGATGCA
TTTATTCATCAAGAACCAGAGCTGGCGATGGAAAGTGAGGAAGCGTCACC
GGCTGCTGATATACCGCAAGAACACGCTTCTCCTGAAAAAGCTGCACTGC
ACACTGCTGCAAGTGAAGATGAAGAAGAAGAAAATTTTGGATTAAAAGGT
TTGTAATGTTGTTTTGTTAATTTCTCTCAATTGAATCTAAGTCTAAACCA
GTAGCTAAGAAATTGCTACTGGACAGGATTCTTTTTTGAACCTCTGGACA
CGGATCCAAAATTACCATACTTAAAGAATAAGTTTTTAGAAAGTGGAGAA
CAGACTAGAGACATATATAAGATTCCTGTACCATACATACCACCTTTTAA
CTTTTTTTATTACCAGAAAAAAAAACAGATACTTTGAACTCAAGGGGTTG
AAAATAGATGGTATTGACCTGAACCTGAAATCTTTCAAATCTTAGGGAAG
TAAGCTCCTTAACGCCAAATCATGATAATTTGCTGTCTACATAACAATTG
ATAATCGAAGCTTGAATATAACTTNTAACGCCAAATCATGATAGTTTGCT
GTCTACATAACAATTGATAATCAAAGCTTGAATATAACTTTTATCGTAGA
CATCAAAATTGAAGTCATTGACCCTTCCTATGCTCACTTCTCTGGAACAG
ACACAATTGACCAATCACAAACGGAATCCAACGATGACTCATCTAATTTA
CTTGGTAGTAAGTTTGAGGAAATTTCCAAAAAATGTTCACGCTCTCTCAA
CAAACCTTGTCATTGTGAAAACTGTCAAGTTCTGATGGACACTTATAAAG
AATTTGTGCAAAACCGACTGAAAGAATCAAAATCACCAGAGCCAGGACCT
GCAAGCTCAAAGAAGATTCGATTAGCAGAATCACCAGGAGCACTCATCAG
AAATTGTCAGAAGTGTGGCATCGATTTCCCTTCATATGAACTCTACAAGG
AACATGTTAGGACCGAACATCCTATTTACTGGAAACACATTCAGTTAGAA
TCTGATTTTAAAGAAAAAAGAAAACTTATTGTCATGGAAGCCAAGAAAGA
ACCCCAACCGTCCAAAACAAACTTTTTCAAAAAACAATTAGCACGTCAAA
GTCAAGTACCCATCCAATCCAAAGTCAAAGTCAAAGCTGCCAAACCTCTT
GTACCGCCTTCTATGCCTACCATGGTACCAACTATGGTCCCTCCACCTGG
TATGGTAGCTCCCACCATGCTCCCTCATGGAATGATGCCTCAAGCAGGTA
TGGTACCCCAACAAGGCATGGCACAACCAGGTATGGTCCCTCAGCCAGGA
ATGGTTCCTCCAGGAATGATGGTTCCAGGGCCTCCTGTTGCTACAAGTGA
AAAGGACGGCGCTAACCCTGTCACATACTTCTACCCCATGCTTTACCCAG
TGTACTTTGTTATGGACAAGGACGGAAAGAAAAAGAGAAAAGGTCAACCT
GTTCCTGTACCAATGGCTATGCCTCAAATGCCACAAGGGATGCCACCTGG
CCCTATGATGGTTCCACCACAATTTGTGAATATTGCACCCAAAAAGCGAA
AGAAGCCAGAGAAGGTGGCGTGTGGGGAATGCGGCTTAACGTTTCAATTT
AAAGAGGAATTGATGCTTCATATGAGGATCCATTCAGATAAACCCTACAA
ATGTGAAACGTGTCAATTATCTTTCGTGAACAATGTAGAATTGAAAAGAC
ACTATCGCACGCATTCTTCCTTCAGTTGTATTCAGTGCAACGAATCTTTC
ACCACTCATAGTCATTTACAAGAACACGAGAAATCGAAACATGGTGCTGA
GCCATTACTTCCAGACAGTAAGAGTAAGCCAATGACTTGCAACACGTGCA
AGATGTCTTTCTCGAATAATGTTGAATTGAAACGACATTATCGAACTCAC
GCTTTCTTCAAGTGTAAATTTTGTAGTGAATCGTTTGTGTCTTGGGAACA
GCTCGTTCAACACTCTGCTAACGTTCATTCGAAAGAAGAGACACCTTCGA
CACCTTCGACACCTTTGAACCAATCAGATGAGACGATCGATGAGAAACAA
AGTAATGACACCAGCGAAGACAGTGAGAACGTTGTCGGCGAAGAAGACTT
CACTTGCTACCATTGTAGTAAATCCTTCCCAACCATGGATATCTTACAAA
AACATTTGAAGGTACATTCCATTAAACAGGAACCTGCCGACGAGCCAGGT
CCTTCATCCTCTCTTCCAGAAGGGGCCAACCAGGTGGTGATCATACCTCC
TCCTTCACAAGTCGTCTTTATGAACCCAACAGGTCATCTACCACCAGGAA
TCACTCAACCTGGTATACCTTCGGCTGGTATGATGCCCCCTGTTGTTAAT
CAACCTCCGACTATGGAGGCAGTAACTTCTTTTGCAACAGACATTAAAAA
GGAACCATTAGATTATGACGAAATTGACGAACAACTGGAGGAGCCGGATG
AAAGCGCAACCAAAAACAAACATTACGCTTGTAACCAATGCGGCGCCATG
TTTAGCCGCATGTTCAGCCTAAACCGCCACAAGCGCATCCACACTGGTGA
GAGAGGGTACAAGTGTGAAATATGTGGCGCCTGTTTCAGAACGCAATCGC
AACGTAAAACGCATTCATTCACACACACCGGTGAACGACCCTTCAAATGT
CATTTATGTCCGGCAACTTTCATCCAACAAGGGAATTTGAAACGTCACAT
TTGGACGCACACTGGTGAAAAACCTCATGTTTGTAATATGTGTAATGCTG
GTTTCCTCAGCACTTCAGACCTCAAGAGACATATCCGGACACATACCGGT
GAAAAACCGTATAAATGCGGACATTGCAATTGTTCTTTTACGACGTCAGG
AAACTTGAAATCTCACATGAAAACGCATGTTAATTCTGGTCATCCTGGTA
TTGTCGCCATGTAATTATCCTTTTTTTAATTTTTGGTCTTTGGACCTTTG
TCTTATTTTAATTAGTATCTCTAACGGTATTTTTATACATAGCTCAGGAG
TGATTATTTTAAACATATTTTTAGTTCTTTTGTATTGTATGAAACGTAAT
TTTTATACTATATGCACTTATTTTTCTGTTGGGGATTGATTTTTTTTTAT
TTTCTTACTATACTAATTTTTAGTAACTTTTGGAGGTTAATTTTTGGTTA
AAGTTTTAAGGGTTATTTATGATCACAGCTAGCAAAACTGAAATTTGCAT
GGTTATAAAACCATTGTGTTGGTTGTACTGTTTCGTCAGTCAAAATATAA

Coding sequence (CDS) from alignment at sc0000350:233699..244598-

>TCONS_00020223 ID=TCONS_00020223|Name=TCONS_00020223|organism=Clytia hemisphaerica|type=CDS|length=7686bp|location=Sequence derived from alignment at sc0000350:233699..244598- (Clytia hemisphaerica)
ACATCAAAATTGAAGTCATTGACCCTTCCTATGCTCACTTCTCTGGAACA
GACACAATTGACCAATCACAAACGGAATCCAACGATGACTCATCTAATTT
ACTTGGTAGTAAGTTTGAGGAAATTTCCAAAAAATGTTCACGCTCTCTCA
ACAAACCTTGTCATTGTGAAAACTGTCAAGTTCTGATGGACACTTATAAA
GAATTTGTGCAAAACCGACTGAAAGAATCAAAATCACCAGAGCCAGGACC
TGCAAGCTCAAAGAAGATTCGATTAGCAGAATCACCAGGAGCACTCATCA
GAAATTGTCAGAAGTGTGGCATCGATTTCCCTTCATATGAACTCTACAAG
GAACATGTTAGGACCGAACATCCTATTTACTGGAAACACATTCAGTTAGA
ATCTGATTTTAAAGAAAAAAGAAAACTTATTGTCATGGAAGCCAAGAAAG
AACCCCAACCGTCCAAAACAAACTTTTTCAAAAAACAATTAGCACGTCAA
AGTCAAGTACCCATCCAATCCAAAGTCAAAGTCAAAGCTGCCAAACCTCT
TGTACCGCCTTCTATGCCTACCATGGTACCAACTATGGTCCCTCCACCTG
GTATGGTAGCTCCCACCATGCTCCCTCATGGAATGATGCCTCAAGCAGGT
ATGGTACCCCAACAAGGCATGGCACAACCAGGTATGGTCCCTCAGCCAGG
AATGGTTCCTCCAGGAATGATGGTTCCAGGGCCTCCTGTTGCTACAAGTG
AAAAGGACGGCGCTAACCCTGTCACATACTTCTACCCCATGCTTTACCCA
GTGTACTTTGTTATGGACAAGGACGGAAAGAAAAAGAGAAAAGGTCAACC
TGTTCCTGTACCAATGGCTATGCCTCAAATGCCACAAGGGATGCCACCTG
GCCCTATGATGGTTCCACCACAATTTGTGAATATTGCACCCAAAAAGCGA
AAGAAGCCAGAGAAGGTGGCGTGTGGGGAATGCGGCTTAACGTTTCAATT
TAAAGAGGAATTGATGCTTCATATGAGGATCCATTCAGATAAACCCTACA
AATGTGAAACGTGTCAATTATCTTTCGTGAACAATGTAGAATTGAAAAGA
CACTATCGCACGCATTCTTCCTTCAGTTGTATTCAGTGCAACGAATCTTT
CACCACTCATAGTCATTTACAAGAACACGAGAAATCGAAACATGGTGCTG
AGCCATTACTTCCAGACAGTAAGAGTAAGCCAATGACTTGCAACACGTGC
AAGATGTCTTTCTCGAATAATGTTGAATTGAAACGACATTATCGAACTCA
CGCTTTCTTCAAGTGTAAATTTTGTAGTGAATCGTTTGTGTCTTGGGAAC
AGCTCGTTCAACACTCTGCTAACGTTCATTCGAAAGAAGAGACACCTTCG
ACACCTTCGACACCTTTGAACCAATCAGATGAGACGATCGATGAGAAACA
AAGTAATGACACCAGCGAAGACAGTGAGAACGTTGTCGGCGAAGAAGACT
TCACTTGCTACCATTGTAGTAAATCCTTCCCAACCATGGATATCTTACAA
AAACATTTGAAGGTACATTCCATTAAACAGGAACCTGCCGACGAGCCAGG
TCCTTCATCCTCTCTTCCAGAAGGGGCCAACCAGGTGGTGATCATACCTC
CTCCTTCACAAGTCGTCTTTATGAACCCAACAGGTCATCTACCACCAGGA
ATCACTCAACCTGGTATACCTTCGGCTGGTATGATGCCCCCTGTTGTTAA
TCAACCTCCGACTATGGAGGCAGTAACTTCTTTTGCAACAGACATTAAAA
AGGAACCATTAGATTATGACGAAATTGACGAACAACTGGAGGAGCCGGAT
GAAAGCGCAACCAAAAACAAACATTACGCTTGTAACCAATGCGGCGCCAT
GTTTAGCCGCATGTTCAGCCTAAACCGCCACAAGCGCATCCACACTGGTG
AGAGAGGGTACAAGTGTGAAATATGTGGCGCCTGTTTCAGAACGCAATCG
CAACGTAAAACGCATTCATTCACACACACCGGTGAACGACCCTTCAAATG
TCATTTATGTCCGGCAACTTTCATCCAACAAGGGAATTTGAAACGTCACA
TTTGGACGCACACTGGTGAAAAACCTCATGTTTGTAATATGTGTAATGCT
GGTTTCCTCAGCACTTCAGACCTCAAGAGACATATCCGGACACATACCGG
TGAAAAACCGTATAAATGCGGACATTGCAATTGTTCTTTTACGACGTCAG
GAAACTTGAAATCTCACATGAAAACGCATGTTAATTCTGGTCATCCTGGT
ATTGTCGCCATGTAAAAGACTCAATAGACGAAGAGGATGGTATTGACTGC
ATTGATATTGATTTTGATGACGGTGATGGTGATGCATTTATTCATCAAGA
ACCAGAGCTGGCGATGGAAAGTGAGGAAGCGTCACCGGCTGCTGATATAC
CGCAAGAACACGCTTCTCCTGAAAAAGCTGCACTGCACACTGCTGCAAGT
GAAGATGAAGAAGAAGAAAATTTTGGATTAAAAGATGAAAGCAATTGGTG
GTACATTTCAAGACATCAAAATTGAAGTCATTGACCCTTCCTATGCTCAC
TTCTCTGGAACAGACACAATTGACCAATCACAAACGGAATCCAACGATGA
CTCATCTAATTTACTTGGTAGTAAGTTTGAGGAAATTTCCAAAAAATGTT
CACGCTCTCTCAACAAACCTTGTCATTGTGAAAACTGTCAAGTTCTGATG
GACACTTATAAAGAATTTGTGCAAAACCGACTGAAAGAATCAAAATCACC
AGAGCCAGGACCTGCAAGCTCAAAGAAGATTCGATTAGCAGAATCACCAG
GAGCACTCATCAGAAATTGTCAGAAGTGTGGCATCGATTTCCCTTCATAT
GAACTCTACAAGGAACATGTTAGGACCGAACATCCTATTTACTGGAAACA
CATTCAGTTAGAATCTGATTTTAAAGAAAAAAGAAAACTTATTGTCATGG
AAGCCAAGAAAGAACCCCAACCGTCCAAAACAAACTTTTTCAAAAAACAA
TTAGCACGTCAAAGTCAAGTACCCATCCAATCCAAAGTCAAAGTCAAAGC
TGCCAAACCTCTTGTACCGCCTTCTATGCCTACCATGGTACCAACTATGG
TCCCTCCACCTGGTATGGTAGCTCCCACCATGCTCCCTCATGGAATGATG
CCTCAAGCAGGTATGGTACCCCAACAAGGCATGGCACAACCAGGTATGGT
CCCTCAGCCAGGAATGGTTCCTCCAGGAATGATGGTTCCAGGGCCTCCTG
TTGCTACAAGTGAAAAGGACGGCGCTAACCCTGTCACATACTTCTACCCC
ATGCTTTACCCAGTGTACTTTGTTATGGACAAGGACGGAAAGAAAAAGAG
AAAAGGTCAACCTGTTCCTGTACCAATGGCTATGCCTCAAATGCCACAAG
GGATGCCACCTGGCCCTATGATGGTTCCACCACAATTTGTGAATATTGCA
CCCAAAAAGCGAAAGAAGCCAGAGAAGGTGGCGTGTGGGGAATGCGGCTT
AACGTTTCAATTTAAAGAGGAATTGATGCTTCATATGAGGATCCATTCAG
ATAAACCCTACAAATGTGAAACGTGTCAATTATCTTTCGTGAACAATGTA
GAATTGAAAAGACACTATCGCACGCATTCTTCCTTCAGTTGTATTCAGTG
CAACGAATCTTTCACCACTCATAGTCATTTACAAGAACACGAGAAATCGA
AACATGGTGCTGAGCCATTACTTCCAGACAGTAAGAGTAAGCCAATGACT
TGCAACACGTGCAAGATGTCTTTCTCGAATAATGTTGAATTGAAACGACA
TTATCGAACTCACGCTTTCTTCAAGTGTAAATTTTGTAGTGAATCGTTTG
TGTCTTGGGAACAGCTCGTTCAACACTCTGCTAACGTTCATTCGAAAGAA
GAGACACCTTCGACACCTTCGACACCTTTGAACCAATCAGATGAGACGAT
CGATGAGAAACAAAGTAATGACACCAGCGAAGACAGTGAGAACGTTGTCG
GCGAAGAAGACTTCACTTGCTACCATTGTAGTAAATCCTTCCCAACCATG
GATATCTTACAAAAACATTTGAAGGTACATTCCATTAAACAGGAACCTGC
CGACGAGCCAGGTCCTTCATCCTCTCTTCCAGAAGGGGCCAACCAGGTGG
TGATCATACCTCCTCCTTCACAAGTCGTCTTTATGAACCCAACAGGTCAT
CTACCACCAGGAATCACTCAACCTGGTATACCTTCGGCTGGTATGATGCC
CCCTGTTGTTAATCAACCTCCGACTATGGAGGCAGTAACTTCTTTTGCAA
CAGACATTAAAAAGGAACCATTAGATTATGACGAAATTGACGAACAACTG
GAGGAGCCGGATGAAAGCGCAACCAAAAACAAACATTACGCTTGTAACCA
ATGCGGCGCCATGTTTAGCCGCATGTTCAGCCTAAACCGCCACAAGCGCA
TCCACACTGGTGAGAGAGGGTACAAGTGTGAAATATGTGGCGCCTGTTTC
AGAACGCAATCGCAACGTAAAACGCATTCATTCACACACACCGGTGAACG
ACCCTTCAAATGTCATTTATGTCCGGCAACTTTCATCCAACAAGGGAATT
TGAAACGTCACATTTGGACGCACACTGGTGAAAAACCTCATGTTTGTAAT
ATGTGTAATGCTGGTTTCCTCAGCACTTCAGACCTCAAGAGACATATCCG
GACACATACCGGTGAAAAACCGTATAAATGCGGACATTGCAATTGTTCTT
TTACGACGTCAGGAAACTTGAAATCTCACATGAAAACGCATGTTAATTCT
GGTCATCCTGGTATTGTCGCCATGTAAAAGACTCAATAGACGAAGAGGAT
GGTATTGACTGCATTGATATTGATTTTGATGACGGTGATGGTGATGCATT
TATTCATCAAGAACCAGAGCTGGCGATGGAAAGTGAGGAAGCGTCACCGG
CTGCTGATATACCGCAAGAACACGCTTCTCCTGAAAAAGCTGCACTGCAC
ACTGCTGCAAGTGAAGATGAAGAAGAAGAAAATTTTGGATTAAAAGATGA
AAGCAATTGGTGGTACATTTCAAGACATCAAAATTGAAGTCATTGACCCT
TCCTATGCTCACTTCTCTGGAACAGACACAATTGACCAATCACAAACGGA
ATCCAACGATGACTCATCTAATTTACTTGGTAGTAAGTTTGAGGAAATTT
CCAAAAAATGTTCACGCTCTCTCAACAAACCTTGTCATTGTGAAAACTGT
CAAGTTCTGATGGACACTTATAAAGAATTTGTGCAAAACCGACTGAAAGA
ATCAAAATCACCAGAGCCAGGACCTGCAAGCTCAAAGAAGATTCGATTAG
CAGAATCACCAGGAGCACTCATCAGAAATTGTCAGAAGTGTGGCATCGAT
TTCCCTTCATATGAACTCTACAAGGAACATGTTAGGACCGAACATCCTAT
TTACTGGAAACACATTCAGTTAGAATCTGATTTTAAAGAAAAAAGAAAAC
TTATTGTCATGGAAGCCAAGAAAGAACCCCAACCGTCCAAAACAAACTTT
TTCAAAAAACAATTAGCACGTCAAAGTCAAGTACCCATCCAATCCAAAGT
CAAAGTCAAAGCTGCCAAACCTCTTGTACCGCCTTCTATGCCTACCATGG
TACCAACTATGGTCCCTCCACCTGGTATGGTAGCTCCCACCATGCTCCCT
CATGGAATGATGCCTCAAGCAGGTATGGTACCCCAACAAGGCATGGCACA
ACCAGGTATGGTCCCTCAGCCAGGAATGGTTCCTCCAGGAATGATGGTTC
CAGGGCCTCCTGTTGCTACAAGTGAAAAGGACGGCGCTAACCCTGTCACA
TACTTCTACCCCATGCTTTACCCAGTGTACTTTGTTATGGACAAGGACGG
AAAGAAAAAGAGAAAAGGTCAACCTGTTCCTGTACCAATGGCTATGCCTC
AAATGCCACAAGGGATGCCACCTGGCCCTATGATGGTTCCACCACAATTT
GTGAATATTGCACCCAAAAAGCGAAAGAAGCCAGAGAAGGTGGCGTGTGG
GGAATGCGGCTTAACGTTTCAATTTAAAGAGGAATTGATGCTTCATATGA
GGATCCATTCAGATAAACCCTACAAATGTGAAACGTGTCAATTATCTTTC
GTGAACAATGTAGAATTGAAAAGACACTATCGCACGCATTCTTCCTTCAG
TTGTATTCAGTGCAACGAATCTTTCACCACTCATAGTCATTTACAAGAAC
ACGAGAAATCGAAACATGGTGCTGAGCCATTACTTCCAGACAGTAAGAGT
AAGCCAATGACTTGCAACACGTGCAAGATGTCTTTCTCGAATAATGTTGA
ATTGAAACGACATTATCGAACTCACGCTTTCTTCAAGTGTAAATTTTGTA
GTGAATCGTTTGTGTCTTGGGAACAGCTCGTTCAACACTCTGCTAACGTT
CATTCGAAAGAAGAGACACCTTCGACACCTTCGACACCTTTGAACCAATC
AGATGAGACGATCGATGAGAAACAAAGTAATGACACCAGCGAAGACAGTG
AGAACGTTGTCGGCGAAGAAGACTTCACTTGCTACCATTGTAGTAAATCC
TTCCCAACCATGGATATCTTACAAAAACATTTGAAGGTACATTCCATTAA
ACAGGAACCTGCCGACGAGCCAGGTCCTTCATCCTCTCTTCCAGAAGGGG
CCAACCAGGTGGTGATCATACCTCCTCCTTCACAAGTCGTCTTTATGAAC
CCAACAGGTCATCTACCACCAGGAATCACTCAACCTGGTATACCTTCGGC
TGGTATGATGCCCCCTGTTGTTAATCAACCTCCGACTATGGAGGCAGTAA
CTTCTTTTGCAACAGACATTAAAAAGGAACCATTAGATTATGACGAAATT
GACGAACAACTGGAGGAGCCGGATGAAAGCGCAACCAAAAACAAACATTA
CGCTTGTAACCAATGCGGCGCCATGTTTAGCCGCATGTTCAGCCTAAACC
GCCACAAGCGCATCCACACTGGTGAGAGAGGGTACAAGTGTGAAATATGT
GGCGCCTGTTTCAGAACGCAATCGCAACGTAAAACGCATTCATTCACACA
CACCGGTGAACGACCCTTCAAATGTCATTTATGTCCGGCAACTTTCATCC
AACAAGGGAATTTGAAACGTCACATTTGGACGCACACTGGTGAAAAACCT
CATGTTTGTAATATGTGTAATGCTGGTTTCCTCAGCACTTCAGACCTCAA
GAGACATATCCGGACACATACCGGTGAAAAACCGTATAAATGCGGACATT
GCAATTGTTCTTTTACGACGTCAGGAAACTTGAAATCTCACATGAAAACG
CATGTTAATTCTGGTCATCCTGGTATTGTCGCCATGTAAAAGACTCAATA
GACGAAGAGGATGGTATTGACTGCATTGATATTGATTTTGATGACGGTGA
TGGTGATGCATTTATTCATCAAGAACCAGAGCTGGCGATGGAAAGTGAGG
AAGCGTCACCGGCTGCTGATATACCGCAAGAACACGCTTCTCCTGAAAAA
GCTGCACTGCACACTGCTGCAAGTGAAGATGAAGAAGAAGAAAATTTTGG
ATTAAAAGATGAAAGCAATTGGTGGTACATTTCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011352XLOC_011352Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020223-proteinTCONS_00020223-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020223-exon-sc0000350-1575043694:244129..244598TCONS_00020223-exon-sc0000350-1575043694:244129..244598Clytia hemisphaericaexon
TCONS_00020223-exon-sc0000350-1575043694:243558..243765TCONS_00020223-exon-sc0000350-1575043694:243558..243765Clytia hemisphaericaexon
TCONS_00020223-exon-sc0000350-1575043694:242343..242397TCONS_00020223-exon-sc0000350-1575043694:242343..242397Clytia hemisphaericaexon
TCONS_00020223-exon-sc0000350-1575043694:237264..237598TCONS_00020223-exon-sc0000350-1575043694:237264..237598Clytia hemisphaericaexon
TCONS_00020223-exon-sc0000350-1575043694:236801..237019TCONS_00020223-exon-sc0000350-1575043694:236801..237019Clytia hemisphaericaexon
TCONS_00020223-exon-sc0000350-1575043694:233699..236349TCONS_00020223-exon-sc0000350-1575043694:233699..236349Clytia hemisphaericaexon
TCONS_00020223-exon-sc0000350-1510915933:244129..244598TCONS_00020223-exon-sc0000350-1510915933:244129..244598Clytia hemisphaericaexon
TCONS_00020223-exon-sc0000350-1510915933:243558..243765TCONS_00020223-exon-sc0000350-1510915933:243558..243765Clytia hemisphaericaexon
TCONS_00020223-exon-sc0000350-1510915933:242343..242397TCONS_00020223-exon-sc0000350-1510915933:242343..242397Clytia hemisphaericaexon
TCONS_00020223-exon-sc0000350-1510915933:237264..237598TCONS_00020223-exon-sc0000350-1510915933:237264..237598Clytia hemisphaericaexon
TCONS_00020223-exon-sc0000350-1510915933:236801..237019TCONS_00020223-exon-sc0000350-1510915933:236801..237019Clytia hemisphaericaexon
TCONS_00020223-exon-sc0000350-1510915933:233699..236349TCONS_00020223-exon-sc0000350-1510915933:233699..236349Clytia hemisphaericaexon
TCONS_00020223-exon-sc0000350-1491911889:244129..244598TCONS_00020223-exon-sc0000350-1491911889:244129..244598Clytia hemisphaericaexon
TCONS_00020223-exon-sc0000350-1491911889:243558..243765TCONS_00020223-exon-sc0000350-1491911889:243558..243765Clytia hemisphaericaexon
TCONS_00020223-exon-sc0000350-1491911889:242343..242397TCONS_00020223-exon-sc0000350-1491911889:242343..242397Clytia hemisphaericaexon
TCONS_00020223-exon-sc0000350-1491911889:237264..237598TCONS_00020223-exon-sc0000350-1491911889:237264..237598Clytia hemisphaericaexon
TCONS_00020223-exon-sc0000350-1491911889:236801..237019TCONS_00020223-exon-sc0000350-1491911889:236801..237019Clytia hemisphaericaexon
TCONS_00020223-exon-sc0000350-1491911889:233699..236349TCONS_00020223-exon-sc0000350-1491911889:233699..236349Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000350supercontigsc0000350:233699..244598 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.42611	2.33249	2.18291e-05	0.964589	103.553	77.9714	28.7829	30.4398	11.9215	21.2155	13.3279	7.39557	8.42943	5.70439	6.78531	6.47388	11.5812	9.06451	5.17203	7.15854	4.88425	6.60228	4.064	5.62561	9.23663	11.9646	13.8408	12.2572	11.5164	12.2782
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
Blast
[Close]
BLAST of TCONS_00020223 vs. Swiss-Prot (Human)
Match: ZN665 (Zinc finger protein 665 OS=Homo sapiens GN=ZNF665 PE=2 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 4.652e-47
Identity = 141/472 (29.87%), Postives = 199/472 (42.16%), Query Frame = 3 
Query: 2217 NIAPKKR----KKPEKVACGECGLTFQFKEELMLHMRIHS-DKPYKCETCQLSFVNNVELKRHYRTHSS---FSCIQCNESFTTHSHLQEHEKSKHGAEPLLPDSKSKPMTCNTCKMSFSNNVELKRHYRTHAF---FKCKFCSESFVSWEQLVQHSANVHSKEETPSTPSTPLNQSDETIDEKQSNDTSEDSENVVGEEDFTCYHCSKSFPTMDILQKHLKVHSIKQEPADEPGPSSSLPEGANXXXXXXXXXXXXFMNPTGHLPPGITQPGIPSAGMMPPVVNQ-----PPTMEAVTSFATDIKKEPLDYDE------IDEQLEEPDESATKNKHYACNQCGAMFSRMFSLNRHKRIHTGERGYKCEICGACFRTQSQRKTHSFTHTGERPFKCHLCPATFIQQGNLKRHIWTHTGEKPHVCNMCNAGFLSTSDLKRHIRTHTGEKPYKCGHCNCSFTTSGNLKSHMKTH 3566
            N+A  +R    +KP K  C ECG  F+   +L  H  IH+ +KPYKC+ C   F  N  L  H R H+    + C +C ++F+  S L  H+    G          KP  CN C   F +N  L +H R H     +KC  C ++F     L +H   +H+ E+       P   ++      Q +  +       GE+ + C  C K+F     L  H  +H+      ++P   +   +                     HL    +  GI S G  P   ++       T +    +     ++P   +E      +   L       T  K Y CN CG +F     L  H+RIHTGE+ YKC  CG  F   S   TH   HTGE+P+KC+ C   F Q  +L  H   HTGEKP+ CN C   F   S L  H+  HTG+KPYKC  C   FT + NL  H + H
Sbjct:  183 NLAGHQRIHTGEKPYK--CNECGKAFRAHSKLTTHQVIHTGEKPYKCKECGKCFTQNSHLASHRRIHTGEKPYKCNECGKAFSVRSSLTTHQTIHTG---------EKPYKCNECGKVFRHNSYLAKHRRIHTGEKPYKCNECGKAFSMHSNLTKHQI-IHTGEK-------PFKCNECVKVFTQYSHLANHRRIHTGEKPYRCDECGKAFSVRSSLTTHQAIHT-----GEKPYKCNDCGK---------------VFTQNSHLA---SHRGIHS-GEKPYKCDECGKAFSQTSQLARHWRVHTGEKPYKCNECGKAFSVHSSLTIHQTIHTGQKPYKCNDCGKVFRHNSYLAIHQRIHTGEKPYKCNECGKAFSVHSNLATHQVIHTGEKPYKCNECGKVFTQNSHLANHRRIHTGEKPYRCNECGKAFSVRSTLTTHMAVHTGDKPYKCNQCGKVFTQNSNLAKHRRIH 611

HSP 2 Score: 166.392 bits (420), Expect = 1.973e-42
Identity = 138/471 (29.30%), Postives = 196/471 (41.61%), Query Frame = 3 
Query: 2214 VNIAPKKRKKPEKVACGECGLTFQFKEELMLHMRIHS-DKPYKCETCQLSFVNNVELKRHYRTHSS---FSCIQCNESFTTHSHLQEHEKSKHGAEPLLPDSKSKPMTCNTCKMSFSNNVELKRHYRTHAF---FKCKFCSESFVSWEQLVQHSANVHSKEETPSTPSTPLNQSDETIDEKQSNDTSEDSENVVGEEDFTCYHCSKSFPTMDILQKHLKVHSI-KQEPADEPGPSSSLPEGANXXXXXXXXXXXXFMNPTGHLPPGITQPGIPSAGMMPPVVNQPPTMEAVTSFATDIKK-----EPLDYDE------IDEQLEEPDESATKNKHYACNQCGAMFSRMFSLNRHKRIHTGERGYKCEICGACFRTQSQRKTHSFTHTGERPFKCHLCPATFIQQGNLKRHIWTHTGEKPHVCNMCNAGFLSTSDLKRHIRTHTGEKPYKCGHCNCSFTTSGNLKSHMKTHV 3569
            V  +P  R K  K  C ECG  F     L  H RIH+ +KPY+C  C  +F     L  H   H+    + C +C + F+  S+L  H++   G          KP  CN C  +F  + +L  H   H     +KCK C + F     L  H   +H+ E+         N+  +    + S  T +      GE+ + C  C K F     L KH ++H+  K    +E G + S                         +   +T+  I   G  P   N+   +    S   + ++     +P   DE      +   L       T  K Y CN CG +F++   L  H+ IH+GE+ YKC+ CG  F   SQ   H   HTGE+P+KC+ C   F    +L  H   HTG+KP+ CN C   F   S L  H R HTGEKPYKC  C  +F+   NL +H   H 
Sbjct:  102 VEKSPNNRGKHYK--CDECGKVFSQNSRLTSHKRIHTGEKPYQCNKCGKAFTVRSNLTIHQVIHTGEKPYKCNECGKVFSQPSNLAGHQRIHTG---------EKPYKCNECGKAFRAHSKLTTHQVIHTGEKPYKCKECGKCFTQNSHLASHR-RIHTGEK-----PYKCNECGKAFSVRSSLTTHQTIH--TGEKPYKCNECGKVFRHNSYLAKHRRIHTGEKPYKCNECGKAFS-------------------------MHSNLTKHQIIHTGEKPFKCNECVKVFTQYSHLANHRRIHTGEKPYRCDECGKAFSVRSSLTTHQAIHTGEKPYKCNDCGKVFTQNSHLASHRGIHSGEKPYKCDECGKAFSQTSQLARHWRVHTGEKPYKCNECGKAFSVHSSLTIHQTIHTGQKPYKCNDCGKVFRHNSYLAIHQRIHTGEKPYKCNECGKAFSVHSNLATHQVIHT 528

HSP 3 Score: 155.221 bits (391), Expect = 6.503e-39
Identity = 119/418 (28.47%), Postives = 176/418 (42.11%), Query Frame = 3 
Query: 2259 CGECGLTFQFKEELMLHMRIHS-DKPYKCETCQLSFVNNVELKRHYRTHSS---FSCIQCNESFTTHSHLQEHEKSKHGAEPLLPDSKSKPMTCNTCKMSFSNNVELKRHYRTHAF---FKCKFCSESFVSWEQLVQHSANVHSKEETPSTPSTPLNQSDETIDEKQSNDTSEDSENVVGEEDFTCYHCSKSFPTMDILQKHLKVHSI-KQEPADEPGPSSSLPEGANXXXXXXXXXXXXFMNPTGHLPPGITQPGIPSAGMMPPVVNQPPTMEAVTSFATDIKKEPLDYDEIDEQLEEPDESATKNKHYACNQCGAMFSRMFSLNRHKRIHTGERGYKCEICGACFRTQSQRKTHSFTHTGERPFKCHLCPATFIQQGNLKRHIWTHTGEKPHVCNMCNAGFLSTSDLKRHIRTHTG 3488
            C ECG  F  +  L  H  IH+ +KPYKC  C   F +N  L +H R H+    + C +C ++F+ HS+L +H+         +  +  KP  CN C   F+    L  H R H     ++C  C ++F     L  H A +H+ E+       P   +D      Q++  +       GE+ + C  C K+F     L +H +VH+  K    +E G + S+                            +T       G  P   N    +    S           Y  I +++       T  K Y CN+CG  FS   +L  H+ IHTGE+ YKC  CG  F   S    H   HTGE+P++C+ C   F  +  L  H+  HTG+KP+ CN C   F   S+L +H R H+G
Sbjct:  255 CNECGKAFSVRSSLTTHQTIHTGEKPYKCNECGKVFRHNSYLAKHRRIHTGEKPYKCNECGKAFSMHSNLTKHQ---------IIHTGEKPFKCNECVKVFTQYSHLANHRRIHTGEKPYRCDECGKAFSVRSSLTTHQA-IHTGEK-------PYKCNDCGKVFTQNSHLASHRGIHSGEKPYKCDECGKAFSQTSQLARHWRVHTGEKPYKCNECGKAFSVH-------------------------SSLTIHQTIHTGQKPYKCNDCGKVFRHNS-----------YLAIHQRIH------TGEKPYKCNECGKAFSVHSNLATHQVIHTGEKPYKCNECGKVFTQNSHLANHRRIHTGEKPYRCNECGKAFSVRSTLTTHMAVHTGDKPYKCNQCGKVFTQNSNLAKHRRIHSG 613
The following BLAST results are available for this feature:
BLAST of TCONS_00020223 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN6654.652e-4729.87Zinc finger protein 665 OS=Homo sapiens GN=ZNF665 ... [more]
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