TCONS_00020359 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020359
Unique NameTCONS_00020359
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length140

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020359 ID=TCONS_00020359|Name=TCONS_00020359|organism=Clytia hemisphaerica|type=transcript|length=140bp
aatttgcgctttaccgcaaaatttctaagtccaagtgtcgtgattaactt
tagactgtccaatatctcTATATTTGTGTACACTAACAGCCTTACTTGTT
CATTCTTAAATAACTAAGCAACATTACTAGGGTGATATTT
Run BLAST on NCBI

transcript from alignment at sc0000354:252536..252675

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020359 ID=TCONS_00020359|Name=TCONS_00020359|organism=Clytia hemisphaerica|type=transcript|length=140bp|location=Sequence derived from alignment at sc0000354:252536..252675 (Clytia hemisphaerica)
AAATATCACCCTAGTAATGTTGCTTAGTTATTTAAGAATGAACAAGTAAG
GCTGTTAGTGTACACAAATATAgagatattggacagtctaaagttaatca
cgacacttggacttagaaattttgcggtaaagcgcaaatt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011435XLOC_011435Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020359-exon-sc0000354-1491911889:252536..252675TCONS_00020359-exon-sc0000354-1491911889:252536..252675Clytia hemisphaericaexon
TCONS_00020359-exon-sc0000354-1510915933:252536..252675TCONS_00020359-exon-sc0000354-1510915933:252536..252675Clytia hemisphaericaexon
TCONS_00020359-exon-sc0000354-1575043694:252536..252675TCONS_00020359-exon-sc0000354-1575043694:252536..252675Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000354supercontigsc0000354:252536..252675 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020359 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top