TCONS_00020577 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020577
Unique NameTCONS_00020577
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length197

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020577 ID=TCONS_00020577|Name=TCONS_00020577|organism=Clytia hemisphaerica|type=transcript|length=197bp
CTTacaggaagtatatctatagggTCTGTGAATCAGTTATTGTTTTTCCT
CCAGTAGAGTAACGGACTTGCGAAAAGGTACTATGtagaatttttcttat
ttaataCTAACTGTTATTTATTTGCAAACTTTCTGTTTTATAAgcttttt
tgattgttttaagaCAACCAaatactactttaggcgtacagacTCGC
Run BLAST on NCBI

transcript from alignment at sc0000358:47515..47711

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020577 ID=TCONS_00020577|Name=TCONS_00020577|organism=Clytia hemisphaerica|type=transcript|length=197bp|location=Sequence derived from alignment at sc0000358:47515..47711 (Clytia hemisphaerica)
GCGAgtctgtacgcctaaagtagtattTGGTTGtcttaaaacaatcaaaa
aagcTTATAAAACAGAAAGTTTGCAAATAAATAACAGTTAGtattaaata
agaaaaattctaCATAGTACCTTTTCGCAAGTCCGTTACTCTACTGGAGG
AAAAACAATAACTGATTCACAGAccctatagatatacttcctgtAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011550XLOC_011550Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020577-exon-sc0000358-1491911889:47515..47711TCONS_00020577-exon-sc0000358-1491911889:47515..47711Clytia hemisphaericaexon
TCONS_00020577-exon-sc0000358-1510915933:47515..47711TCONS_00020577-exon-sc0000358-1510915933:47515..47711Clytia hemisphaericaexon
TCONS_00020577-exon-sc0000358-1575043694:47515..47711TCONS_00020577-exon-sc0000358-1575043694:47515..47711Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000358supercontigsc0000358:47515..47711 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020577 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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