|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020599 ID=TCONS_00020599|Name=TCONS_00020599|organism=Clytia hemisphaerica|type=transcript|length=529bp
AAATTCTCCTGTCCAACAAACATCAAACACACTGACCACCGCCCACGAGG
AGGGCGTGAAGCGTTCTCATTCTGATTCCAAGCTCGTTCTCCCATTGGTG
GAAGACAACAAAGAAATTCCGTCGATTAGCAGTAGTCATTCATATCCCGA
GTCCTTTAATATTGAGGAGATAACAACACCAGTATCAGAATCACCACAAA
ATAATGGAGGTAAAAAGAAGCGGATGGAGACATTCACAAACTTTATGGAG
AAAATCCCGCTCAAACGCCCTTCAAATATCTCCCTCCCTTTAACCACCTC
GACACCCGCCCAATCATTGATAATGCTTGGTGAAACCAACGGGGCGTCAA
GTGGGGCGTCACCTAATGGAGGGAATTTCCCTGAATTCCAGATCAACCTA
CATGCAGCTATTGATGAAGAACCTGTTCTGTCGGACAGTCAGACGCAACG
TAACTTGCAAGACCGGCTGCAGATGCTAAGTCCCAATCGCTTCAAgaagt
tgaagaagaaaaatagatTAACACAGGTA Run BLAST on NCBI transcript from alignment at sc0000359:126390..128874+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020599 ID=TCONS_00020599|Name=TCONS_00020599|organism=Clytia hemisphaerica|type=transcript|length=2485bp|location=Sequence derived from alignment at sc0000359:126390..128874+ (Clytia hemisphaerica)
AAATTCTCCTGTCCAACAAACATCAAACACACTGACCACCGCCCACGAGG
AGGGCGTGAAGCGTTCTCATTCTGATTCCAAGCTCGTTCTCCCATTGGTG
GAAGACAACAAAGAAATTCCGTCGATTAGCAGTAGTCATTCATATCCCGA
GTCCTTTAATATTGAGGAGATAACAACACCAGTATCAGAATCACCACAAA
ATAATGGAGGTAAAAAGAAGCGGATGGAGACATTCACAAACTTTATGGAG
AAAATCCCGCTCAAACGCCCTTCAAATATCTCCCTCCCTTTAACCACCTC
GACACCCGCCCAATCATTGATAATGCTTGGTGAAACCAACGGGGCGTCAA
GTGGGGCGTCACCTAATGGAGGGAATTTCCCTGAATTCCAGATCAACCTA
CATGCAGCTATTGATGAAGAACCTGTGTAAGTTTTATGACAATGAAAGCT
ATCCCTAGTCCCCGCAAGCAAAACGTTCTGTTCAatcatattcatgatat
gcacgactgcaatgacttcacaaaattatgcaatttttctgcttttgttc
cacccaatacgtcactttttctattgtttaagtgacgtattggtggaagt
tctcagaagactctccagtggtacatatcatgaataaccCTTCGCTGGGT
GCTCTATGCTGATAGCTATAACGCATACTTTGGCCGTGATTTTTCatctg
attttttgtttttcttggtTCCCCTAAGTTCAATGCTTACTCAGCTGACA
CACAACATTCCttcgacgttcatctaacgttataatGGACGTTGTAAACA
TTAGATATGTGCTAGCTGGCTGGGTATGAGAATCATTGTCCAAAACAAAC
ACACTTTGGAATTTTTAAAGTATTTCGTTGCAATGATTGTCACTTATCTT
ATATATCATTGATAAGTTATTAAGACAGTTTCTACTAAATAGAAagttat
caattttttttacattatttaATCCAGGCTTTCAtccatttgtttaaaaa
aaaagtatgaGTCGATGTTTAGATGATCTTTAGCCTGTGTATTCGTGGTG
GGACGATCACATTAAAATGCTCTCTGAAGGAGGGTGGGTTATCTCGAGCT
TTTATCTTTATATGGCCAATCAAGATAACTCTCCCTCGTTGAAGCGATAG
ATGTCGACTTGTCTACTAGACAATTTTAACCGCTCGTTGAAGGGTATGGG
AATGAAGTGTGGAGGTGACAGCGAAGCTCACTTACTTTGTTGAGTAATAT
GACAGGCTAGTGTGTTGAACTTTGGTTTTTAAGATGCAAGGCTAGTGGCT
TTGACCCATTACTCTTATGGTATATTATATGATGTGTTTTGGATTTGGAT
AACTGTTTAATTTCGTTGTGATTTCCACGACTTTTTTAAGAGTTAAATTC
CACTTTAACTAAGTTGTCGTATGAAGCAAGGTACAAATTGTACGATACAA
GTGTCTCTTTGTGTTAGACTTCTTTCTACTATCTAGATATGGATAATTTT
TCTTTGCGTATTGTGCTATTGGTTAAGATAACTCAATAGTCGAGAAAATT
ATCCCATTCCGAGAAATCTTCTAAAGACTGACCCTCCCACCATAATCTGT
TACTTCATATTTTATTAATCAAATCATTTCATTCATAAAGCGTTAATTTC
CTTTGGCTAggttttccattttttataaCAAATAGACATGACAGACAAAt
catttaaattgaaaataaattgtcTCGCGATGCACTTTCTTTCGTTATTA
CATGATTTGCATGATCTCATTAAAAATTTTCTCTCTAATCAAAGATAACA
TCAAAACACGCTATACATTTTATATACAGTGGAAATTCTTTAACCCGAAC
CCAcggcgttctaaatctagacGCAGtgctcgaacctctataactcgaat
gtctccataactcgaacaaattttactgtccattcagttaacaatgttaa
caaaatcttacttcataactcgaaatttccttaactcgaacaaatttgtt
tcCCTTGCTTGATCGAGGTATGGAGACACTACTCAAAGGAGAtatcgagt
tatggagtaaggtttataaggcattgggcttttccagaaatagtccgttt
cttttcaagtaaaaaatacgatatccaggggtaaacctttataagagagg
atatccagggggttgagcatatttttaagagtggatatccaggtgGTCTT
TACTAGTAacgttcgatacttcgaaaaatcaatatcctcaatttcctttt
tctggaaaagcccattgttaTCTAAAGGAACGAGAAAATATGTTAGAGTT
AAAGatacattcgagttaaagacgTCAGAGataaagagactccactatGT
TGAATTTAACTCCACTTTCTTTACTTCTCCAGTCTGTCGGACAGTCAGAC
GCAACGTAACTTGCAAGACCGGCTGCAGATGCTAAGTCCCAATCGCTTCA
AgaagttgaagaagaaaaatagatTAACACAGGTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020599-exon-sc0000359-1491911889:126390..126815 | TCONS_00020599-exon-sc0000359-1491911889:126390..126815 | Clytia hemisphaerica | exon |
| TCONS_00020599-exon-sc0000359-1510915933:126390..126815 | TCONS_00020599-exon-sc0000359-1510915933:126390..126815 | Clytia hemisphaerica | exon |
| TCONS_00020599-exon-sc0000359-1575043694:126390..126815 | TCONS_00020599-exon-sc0000359-1575043694:126390..126815 | Clytia hemisphaerica | exon |
| TCONS_00020599-exon-sc0000359-1491911889:128772..128874 | TCONS_00020599-exon-sc0000359-1491911889:128772..128874 | Clytia hemisphaerica | exon |
| TCONS_00020599-exon-sc0000359-1510915933:128772..128874 | TCONS_00020599-exon-sc0000359-1510915933:128772..128874 | Clytia hemisphaerica | exon |
| TCONS_00020599-exon-sc0000359-1575043694:128772..128874 | TCONS_00020599-exon-sc0000359-1575043694:128772..128874 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000359 | supercontig | sc0000359:126390..128874 + |
Blast
The following BLAST results are available for this feature:
|
