TCONS_00021045 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021045
Unique NameTCONS_00021045
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3501

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021045 ID=TCONS_00021045|Name=TCONS_00021045|organism=Clytia hemisphaerica|type=transcript|length=3501bp
TTGTGAGCATGTAGTTATACATGTATTATATGAGAGGGTATGGTTTTGTT
GTGGCTTCGCTTTTCGCTCCCTGCCGCCTGCCGCCGTCTGGCCTGGATGG
AACCCAAAGAtgaaagaagccattgtagtgcaatgtttacatttttggaa
agttctaAAATGGTAGAAGAAGCTCTGTAAATAAAAATTAGACTCTTTTA
CGTGTTGTGTCGTTCACCACGTTGAGTTGAATTGtgaatagaaaaagaaa
gtagcATTACATGAATCAAAATGACAGAAATGGTTATCATGCCAACAGAT
GAACGTATCCCACCGATGGGATCAGAAGCTGCAGATACACACTTCAATGA
AACTGCTGCATACGATCCTAAATTAAATACAAGAGACTTATCACATAATA
ATAACAAACAATGTATTCCTCATTACGAACATTGGAAGGACAGCTTACCA
GATCTATTAGATGACACAGAaggatataaattattttacgAATTTCTAGA
GCAAGATAAAAGTATCACGTTATTTGAATGTTGGTATTGCTGCAATCAAT
ATCGTAACTTGCCACCAACTAGAACTAGTGCCAAAGACATTTATCATAGA
TTTGTAAAGAAAAAGGACCCACATATTCCAATTTCTGAtcaagcaagaaa
taatttggtATTGAGGATAAAGGCTAACGATATTACAGAAAAAATTTATG
AGGAAATTGAAAAGGAAGTTTACACTAATTTAAGGGACAtttgttatcca
aaatttttaaaatcagactGTTTTAATCAATATTGCGAAAGTTCTGGTCA
AATGCGGTATGCAGAATATAATACCGATTATGGAAAGCCATCAACAAAAT
ATAGTGGAGTCCTTGATCACATTGACAAGCATGACCAGTATCAACCTCAA
TCAAGATCAGAtTATGAAAGGCAGTATGAATGCGCCCGTCATCCACACCA
CGATCGAGTTCACGGACCCTCATCCAATTATGACGATCATCATAGCATGC
CGTCAGATTATGATCGTAGCTCTATAACAGATTCCAAAACTTCCATggGA
TCAAGTAGTCGACACGGTAGACCGTCTCGAGGTCACAATCGCGATTACGA
TGGACCAATGGACGTTAACAATTTCAAGCCGCGTACGCAGCGAATCAATC
AAGATCGCATGAAACCGATGAAACCGACAGACTTTGCTGCACTTTTGAcg
caaaaacttgaaaaagtttTGATCGACCGAACTAGAGATGGCCATGATAA
TTCGTCACACCATTCTCATGGTGACTCAATGGATCTGTCTTCAATGAAAC
ATCATCTACCAGGTGGACACAACAGTCGAGTACCACCCCACCATCAACCT
CACATACACGATTTCGATGGCCAGAGTGAGAGTGACGCCCAATCTTGGGT
GCTCTCTGACCGGCCAAGCGTCGCCGGACAATCATCACATAGTGGCTCAC
ACAGTggtattttaatgaaaaataaagcaaaagaaCTCAGAGATAAAATT
CATCATCATATTCGAAGTGACTTGAAAGAATGTCGTTGTGCTGAGTGCCG
CCTCACGCCCTCCGTACATTCGGGCGGTCGTCACGAACACGATTCGCATG
CACGACACGGTGGCTCAGAACATGGTTTTTATCCACACAGTAGTAATAGT
AACTCTTATAATTATTCCAATGATACAATACAAGACCGATACAATACAAT
GTCGTCATCATCTCACCATCGTGGTTCCTCGCGCACGCGTGAAACGCACC
CGCATCCAGATGCTGCACCACCATTAGACACTAGTAAAATTTATTCTTGG
ATGGAGAAAAACGAACGTTACCAACATCAAAAATCGTACCCAGACCCCTC
CCCGTCACCTTCTTTACGTCGAAAGAAAGCACCTATACAATATAACACAA
GTAGGTCACAGAACTCTCAACAGCCTATTGCGCAAGATACGGGCATGCCG
TTATTACCACAACCTGACCCAGACAATGTTTTACAAGAGGTTAAACGGAA
ACTGGAAGAACCCTCACGATCACAACAAAATCATCACCGATCTTCaagac
aacaacaacaatatcATACGCCCCATTATGAGGGCGGATACCACCCTCAT
CACGATAATCAATCAATGGCTTCTGCTCCTTGGTCGATGTCTGATAACTC
TTCAATTATTTCTTATAACCCTTCACAAGTTTCTACCGTACCTTCATCTG
CGTCTAGATTATGGAACGCTCAAGGTTATTACAAAGATGCCGGTAGTGAA
GTCAGAGACGATCGTTGCACGCCTAGCGAAGTTCACTCGCAAGCAGCTTC
TAAACACAGCGGTCCGCGTAGCGTGACACGTAGTGATCATATGAGCGCTG
CACGCAGTGATCATCACAGTGACGTAAGATCACAATCGACGGGAATTAGT
TACGGCAGTGACGGTAGTAAAGGACGTTCTTCTTCttctaaaaataaaac
tgtTATCACGTATTATTACGGTAGTGAACCTATCCCGTACCGTATTAGCG
TTCCGACTACGGAGGTTACGTTGTCACAATTCAAACTCGAAACCAAACGT
GGTAATTATCGCTTTTTTTTCAAGACTGTTTCCAGTGTCGATGGTGAGGT
TGTTTGGGAAGAATTCAAAAACGATGATGATGTCCTACCTAAATTTAATG
ATAAAATTGTTGGCAAAGTCGATAAGATCTAATTGACTTTGGTTTTTGGA
TTTATTTGTTGTTATTGTTTGGATTATTTCTCTTAATGATAATCATGACG
GAATTGTTGTTAATGTGGACCAAGTTTTGATTCTACCATAATGAACTTAT
aatatttatgacgtaatgttttaaacAGAAGCACCCTAAAAGACCAAACA
GCCGGTCTAATTTTGAATTAAACAATAAACTAGGCCCTGGCTATTTTGGG
TGCTTGCGTCTGAAAAATTCCGACATGAATGATTGATCATGAATTGATAA
ATgcgttgtttttttatatagaTCCTCGTGTTaatgattacgtcatgaat
attattGTCCGCTTGGTTATATTATCactgtcttttttttttcaaattta
tgctCTGCATTTAAAACTTTATCACTATTTATATTTTGCCAATTCTTCTA
CCCCTGTTTGATACCCCTAAatatttgttcaattttttaccTTCCTCGTA
CAGGTTCGGGAatcgaaattcattttgacaaatttgaactttttgccaAG
TGTCAAGATATTCTTTCCTTGCTTACTCTTGGCTTTACCTTTCCAACTTT
CTTCCTTTTTCCTTTTATATTCCttcctaaattttttaaaatagatattt
tacaattttctccCTTTAAGTTAATATACAATATACTGAAaagagtttta
ttttttactagATTTATCTTACTACCCCATGATTGTATGATATTTTAAGA
TAAACCCCGAAATATACCCCTTTATAATTACACCCCAATATtgtgaaaaa
atgaaataatatcaaaaaatacaacaaaaggaaaaatgtgaaaattaaca
a
Run BLAST on NCBI

transcript from alignment at sc0000377:139881..149964+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021045 ID=TCONS_00021045|Name=TCONS_00021045|organism=Clytia hemisphaerica|type=transcript|length=10084bp|location=Sequence derived from alignment at sc0000377:139881..149964+ (Clytia hemisphaerica)
TTGTGAGCATGTAGTTATACATGTATTATATGAGAGGTCGATATtacatt
ttgtgcttgttgttGTTctgcattttattttcataaaatatactGATAGA
TCCTCTAGCTACTTGATATTAAGCTTTTGGTAAAATGATACGATATGGAT
TGTATGTTTTGAGTGTATGTATGTGTATACATgtaattttatttcaaaca
aagataatacaaatttcaattttttgcactGCAAAACACTGACATAATCC
TAGTCAAGTCAACAAAGAAAGGTTTGAAATCTCAAGAGGTTACCTTGCCA
AATGATTAGAGAAGAGAGAGAGAAGAAAAATACATGATATCAATTTGTTA
TACGGATGCTTCATAGAGTTTGAAAATTATAATCACACAAAATGGATAGA
TATAATTGAACAATTAGATGgcttttttgatgttgtttaTGATGGCTCGT
CAACTGAAAGTCATCATTTTGTTCTGTGTTTTGTTTTGTGGATAGCCGCT
GAGAATTGGTTACTGTTACTTAGGGAGAACTAGctataaagaaagaaatt
tcaaaagttgaTGATTTTATAAAAGTTTGCAAACTCAACACGGTAAATCA
CTTACCGAGAAATTGAACAAGCCTTGAAACGATTTCAACGATTGAAAGAA
ACCAGAAAGGAACATACCAGCTAAGGGTTGAATTTTCTATTACATTTGTT
GTTATAGGGTATGGTTTTGTTGTGGCTTCGCTTTTCGCTCCCTGCCGCCT
GCCGCCGTCTGGCCTGGATGGAACCCAAAGAtgaaagaagccattgtagt
gcaatgtttacatttttggaaagttctaAAATGGTAGAAGAAGCTCTGTA
AATAAAAATTAGACTCTTTTACGTGTTGTGTCGTTCACCACGTTGAGTTG
AATTGGTTGGTTATATTTTAAAGGCTTGATTCATACTTTTGCTTTGATAC
ATTTGATTCTCAATATCAACGTCATACTTTGAAGTTCTGTTTATCCTCTC
AGTTAGTATATTTTAAGTTCACCTCTGATTGGATATATAAACACTGCCTC
GAAAGACAACAGGAAACATATGATTATGAATGAAGGGTAGTGTTTTATAG
GTAGTAGAACCTAGAGGTGccttgtttttcatttgtttcatacTTCAATT
GGTAATTTTAGTGATTGCTAAAGTATTTGGAGAAGCATTTGCTCTCTGAC
TGGATGAGGTGCTCTGCATTGTGGTGGTGGCGCACAAAcaatttttagta
aaaaaaccATTCCTTTCATCTTTTAGtgaatagaaaaagaaagtagcATT
ACATGAATCAAAATGACAGAAATGGTTATCATGCCAACAGATGAACGTAT
CCCACCGATGGGATCAGAAGCTGCAGATACACACTTCAATGAAACTGCTG
CATACGATCCTAAATTAAATACAAGAGACTTATCACATAATAATAACAAA
CAATGTATTCCTCATTACGAACATTGGAAGGACAGCTTACCAGATCTATT
AGATGACACAGAaggatataaattattttacgAATTTCTAGAGCAAGATA
AAAGTATCACGTTATTTGAATGTTGGTATTGCTGCAATCAATATCGTAAC
TTGCCACCAACTAGAACTAGTGCCAAAGACATTTATCATAGATTTGTAAA
GAAAAAGGACCCACATATTCCAATTTCTGAtcaagcaagaaataatttgg
tATTGAGGATAAAGGCTAACGATATTACAGAAAAAATTTATGAGGAAATT
GAAAAGGAAGTTTACACTAATTTAAGGGACAtttgttatccaaaattttt
aaaatcagactGTTTTAATCAATATTGCGAAAGTTCTGGTCAAATGCGGT
ATGCAGAATATAATACCGATTATGGAAAGCCATCAACAAAATATAGTGGA
GTCCTTGATCACATTGACAAGCATGACCAGTATCAACCTCAATCAAGATC
AGAGTAAGTATACCTTGTTTAATAAACAATTTTTGGAAGGTTCAAGGCTC
CAATTACATCCATTAGAGTTTCTTCTCATTGATATAAAGTCAGGAGGAAT
CAGAGAAATTGTAATACAATAGGGATGAGCATACACCTTTTCTTATAACA
ACAATTTACAGAAAATGTGACTCAGTCTCATTTGTTATTGCAACAgaatt
tcagcctgaaatgaaaaaataactaGCTAGAGGCACATTCTAAATTTCAT
GGTTTTCACAAAAAGAAATCTgcatcatgaatatttttgaattaagaaga
ccagatattttcaaaaatatcaatatgaCAACAAGTTGCATACTTTGCAA
TCTTTATAATCAAAACAGCATTCCTTTTCTTTGAAGAATACAACATTGAT
ATTCTGTAATTTCCTTGCTTTTATACAGATCTAATAGCTTTTCACGACGG
TGCCTGAGGATGTAAAGAGAGACTACATTGATTCCTCTCATAGCAGGAGA
ACACTTTAGTTTATATAAGGACAGTAatgtttttaaggttttttaagaat
tcttttaaactggcacctttaaaactttattttccAGGATGTTTTACTTT
TAAGCTTTATTCTATGATGATTGCTTTgaatttatgttgttttttgaaCT
GTTCTCTTTCTCAATCTTCAAAAGCTTACGACGCCATTGTTTCATAGAGA
GATCAAATTAGTATCAATTATGAGCAAAGCTTCAAAAAGAGATTCGGTTT
TTTTTATTGCCGGTATGTAATAatcaaagataaagaaaaaacatagAATA
GGATcatgtagaattttttttcttttttaccaaATTGCCGTTTCCTTTTC
ACTGCAATTTTGGCTTAGGGAAAATATGTCGTTACTACAGGTCTAAATGG
AACTTTTTTGTTCATGTAATTTCTGATGACTAAAGATTACCATATTCAGA
ATATTTTTGGTACTAATAACTTTAGGTACTGAATTTTACAGTATGTAAGG
CTTCCTCTTCTAATTGACAATTCATATATATTTCCAAAAAGATatagaaa
tgaagaaaataccCTGAGAAGTTGATAATGACAAAATTCCTTTTGAACTA
TGATATATATAATCATGTTTCATTccctttattttcttatttttcatttt
ttggttatcttttttatttcagttcaaaatttttcttgaaaatctttttc
cacAAGTAGATGGTAGAAAGAAAgtttttccttttctctttttttttaat
catcaaaATTCCCCTCTCTATTCAACAATTCCTTTATGTTGTTGTGATAC
TCAAcgctttatacttttttttcatattttgcgataatgtctttttcttt
tcttgtgtCCTACTTGTTTACATTACACACCAATATTTATCAcataaaag
gaaagaaaaacttAACCTTGCATTCCGGTGTAATACAGCCCTTAAAGTCG
CCTGTCACTACCCTGTTATACTATTTATCATTTGATGTTATGTTgctgtt
tctctttttttaatgaatttttttttcttcccctctatgttatgtttttc
tttcttttcactcagcataaacgtttcttataagaacaaagtatataaga
acattacatttcaaggtaaaaaatattaagaaaattctaagaacatttta
aaacactTTACAAACCCTAACATGCAATATCTTAGGAAATTACactaaag
cactttgaaatgtTTGCAatttgctgaaaataagaatatttcatattaat
gttcttatagaaaTAACGTGTACAATTTCTCAGTGTGTTTTCCTTTCACG
GTTAAAAGCCTCTCTGTATCGATTGGACCGCTTCCATCAAAAGACTTCGC
ACTAAATTACATGAAACTTTGTTTCAATCATAataaaagaacaacaaaaa
atatTCCTTGATGGATTGCAGCCACCTCATTATTACAATCAAAACCAATA
TTAATATACtcctttgaaaattaattttaaaaattttccctttttttctc
tttacagtTATGAAAGGCAGTATGAATGCGCCCGTCATCCACACCACGAT
CGAGTTCACGGACCCTCATCCAATTATGACGATCATCATAGCATGCCGTC
AGATTATGATCGTAGCTCTATAACAGATTCCAAAACTTCCATGTAAGATT
AACTCTAATATTTCTTTTTCGGCATAAATTGGAATCTTATAATGTATATG
TCCTTAGTTTTCTGAAACCATTGGCTATCAGTTCCCAATAGTTTAACCTA
ATTATTTCCACTTTTTAAATGCCTCTAAAGCCtatgtttttcaaaactct
ATTTAGTAAAgtactttctttttttatttagggGATCAAGTAGTCGACAC
GGTAGACCGTCTCGAGGTCACAATCGCGATTACGATGGACCAATGGACGT
TAACAATTTCAAGCCGgtaagattttatttaaaatttcttcattacaAGT
CCGAACTTGATTCAAAGTAATCAAAGAACAGTTCTTTTAAACGATAAATC
AATGATATAATATAACTGGGAACCTTTGGAATGTTTCTTTAATCTTCGGC
AAAAAGAGAGGGATAAGTTGTTGATACAAGCGTAACCCTTGGTTCCCATC
TGATCTTATTGTGAGGCTTGAGTAGGTCCCCTGCTGTTCGAACAGACAAC
ATTCGCTTTGGTATGAAATATTCGATGCTTATTAGCACCCATTTTCGTTG
TTTTGTTTCATATTCAGCGTTTTTTTCTAACATTCGTGTCACTGAACTCG
AACTCATTAAGAGCAATAACCTCGTTttcttaaacatttttttttttgtg
ttattGTTGTCTAGGATTTTTACTTAGGCTTTATAGTACCGTTCTGTTtc
ttaaacgtttttttatataataaggACTCATAAACGCCAAATTGCACACA
AATTACTCCCAATATGAtggtgaaaattaaaacattttaacaACAATTTC
GGCTTAAAACTcataaagttaagaacatcgagGGCTTAGAAAATTTgtac
gttcttataaaaaatcatttatgcCGTGTATTAAGACTTTAAGGTAGCCT
GCTGCGAAAGTGGATCACAgtgcttgttttcaaaaattctctTTGTGTTG
GAATTCCCTGTTCTATCTTTTGTATTCTGTGCGTGCCTTATGTTTTTCAT
CTAACACCGAGAGAgcagaaaaatgtttttataagaactagacAATTTTG
GCTGAGGCTGAGACTCGGATGAGGCTGTTTTTATCATTTCGTGATTTTGG
ttcaaatgtttttgaaatggtctaaaaaatactttttctagCCATATTTG
ACAGTTGAGATTGGCATATTATTTTTAGGTTATTGATAAAAAtcaagcct
catgttcttataaaaaacgtgaaaGATAGAGTCACTTTGCTTGTACATAG
ATGAAAGAGCTCCCTTCACCGTAAGCTTAATCTTGTTTCTCTGTACGCGC
TGATGCGCTTTTCGAATAAGTCTCGATTTGAATCAACTATAACAATTTTG
TCCCCTTTTCTtgagttttataagaacaatgtatATTGTAAATAACCGAA
GTCAAGTATATTTCCCCCTCCtttttaatgttcttataaagaattgAAGA
TGTACTATTAGAGCCTTCTCGTAAGGCTAGTACGCTAATGAAATTATATT
CAGAAAACATCAAACAGAATAATTTTGTATCCAACACTATACTTCTTAAA
ACTTttcttaatgttttttcttcttaaaaaatcTTACTTGAAAgagatgt
ttttaaaaatacattGCCGACTCAAGAGACTCAAGACCGCTCTTATATAA
GATTACGAGTCCGCAAAAATTGTCTTTACTTGCGTTTTCTTGTTGAACGT
AACTGTAGcgcatttttcttctttcttttaccTTATTAAGATTGTCAAAG
AACATTTTTCCCGCCCGTCCCGTCCCTTTCATTTTCNAACTGTAGcgcat
ttttcttctttcttttaccTTATTAAGATTGTCAAAGAACATTTTTCCCG
CGCGTCCCGTCCCTTTCATTTTCATAGCTTTTTCCCAATTCTTTAAACCT
CTCTTTACCGAATTTcctcttttaatttttaaaggaCCTTAAAAGAGAAT
GCGCTAATATTTCTATTTCTTCGTTTATGACTCtttataaattaaattgg
atgaGTAAAGAAGTTTTATTTCTTTCCTGGCCATAAGCCCTTCCAATACT
GAAAAGTTCCTTTTGCTAAGTAAACCTAAGCGCTTAGGCCCATAATTCTA
TATAATACCCATCTAGCATCAATTTGCTGTGAGATTTTATAGCCATAGCA
TAACATTTCTtatcttttaaaagattttgtttttatgttaATAAGCTGTA
GAAGCTGTCTTGAAACCATAACAAAATTTGTGTGTCGGTATGTCTTGTGC
ATTATGAGCCgtgatagaaaaaaataaatctttaaaaaacattgtttcaa
cgttcaaacTAAATCCATTAAAAGAcgttccatatttctttttactCAAA
CACACTCAAAAATATGGTTTTATTTTGCCTGTGATGACTTTTTTACGAAT
AATTTCATGCTTATACGCAAAAGATTAAGCAGGTTTAGAACCCCCAAAAG
TCGCCcgtcttaaaaaaaattgatttctcaattacaaaaaagaaatttgt
aacAAGATCTAAATTCGCTAGTCTATTAACAAATTGATATGCCGACTCTT
AAAACACGTGCacctttttttaagaaatttctcTGCTACGAGAAAAAACC
CCtacatattttgtttttgttatcaAATAGTCGCTCACAAAAACATTATG
AAAAATAAGttcaaaaaatgtataatttgatATCGTAAAGTCACTGGGCC
GACAAACCGATTTTAAGAACACCGTCATTTTCATAAACAATAATTTTTTG
CATCGCATTCTTTTCATCCTTGTTAAAAACGTTACGGTATTTCTTGCATA
CCTTTTGGACTTTTCGGAAATTAAACCATATTGATGCAGTTTTCTTGGGa
ggaaaagtattttttaaacatgGTATCAAACATTGGGGTCAGTCTTTCGA
TGACTACCATTAGTGTAAGATAAATTTTCTCGTGTAGCTTCCAGACCATA
GCAACTGTACTGTAGACTATAGTTCGTGNGCGACACGGTGGCTCAGAACA
CGGTTTTTATCCACACAGTAGTAATAGTAACTCTTATAATTATTCCAATG
ATACAATACAAGACCGATACAATACAATGTCGTCATCATCTCACCAACGT
GGTTCCTCGCGCACGCGTGAAACGCACCCGCATCCAGATGCTGCACCACC
ATTAGACACTAGTAAAATTTATTCTTGGATGGAGAAAAANGTGTAGCTTC
CAGACCATAGCAACTGTACTGTAGACTGTAGTTCGTGTCTTTTTGCCGCT
GTCTCGTTTCATACATACAAAACACTTGATGGAGACTACTttgaatataa
taaaaaaattttccgaaattattttatttcttcttctttctttattATTA
GCCTGGTATATAatctctcttttctttttctcttttaacaGCGTACGCAG
CGAATCAATCAAGATCGCATGAAACCGATGAAACCGACAGACTTTGCTGC
ACTTTTGAcgcaaaaacttgaaaaagtttTGATCGACCGAACTAGAGATG
GCCATGATAATTCGGTAAGTGATTCTATAACAATCCTTATTTCTATCGTA
TCCTAACCGTATGAACTTCATGGATGAGTGTAAAGAATTCAATGTTTAAA
CTATATAAATTgtaataaatctttttcaactttttttcaatatatgaCTG
TTCACTCTGAAAATTTACTTCGTTTTAGTTTCATTTCTTTATTTCGAGTT
TTGCTGACCTGTCTTATAtcattcttttcttttataGTCACACCATTCTC
ATGGTGACTCAATGGATCTGTCTTCAATGAAACATCATCTACCAGGTGGA
CACAACAGTCGAGTACCACCCCACCATCAACCTCACATACACGATTTCGA
TGGCCAGAGTGAGAGTGACGCCCAATCTTGGGTGCTCTCTGACCGGCCAA
GCGTCGCCGGACAATCATCACATAGTGGCTCACACAGTggtattttaatg
aaaaataaagcaaaagaaCTCAGAGATAAAATTCATCATCATATTCGAAG
TGACTTGAAAGAATGTCGTTGTGCTGAGTGCCGCCTCACGCCCTCCGTAC
ATTCGGGCGGTCGTCACGAACACGATTCGCATGCACGACACGGTGGCTCA
GAACATGGTTTTTATCCACACAGTAGTAATAGTAACTCTTATAATTATTC
CAATGATACAATACAAGACCGATACAATACAATGTCGTCATCATCTCACC
ATCGTGGTTCCTCGCGCACGCGTGAAACGCACCCGCATCCAGATGCTGCA
CCACCATTAGACACTAGTAAAATTTATTCTTGGATGGAGAAAAACGAACG
TTACCAACATCAAAAATCGTACCCAGACCCCTCCCCGTCACCTTCTTTAC
GTCGAAAGAAAGCACCTATACAATATAACACAAGTAGGTCACAGAACTCT
CAACAGCCTATTGCGCAAGATACGGGCATGCCGTTATTACCACAACCTGA
CCCAGACAATGTTTTACAAGAGGTTAAACGGAAACTGGAAGAACCCTCAC
GATCACAACAAAATCATCACCGATCTTCaagacaacaacaacaatatcAT
ACGCCCCATTATGAGGGCGGATACCACCCTCATCACGATAATCAATCAAT
GGCTTCTGCTCCTTGGTCGATGTCTGATAACTCTTCAATTATTTCTTATA
ACCCTTCACAAGTTTCTACCGTACCTTCATCTGCGTCTAGATTATGGAAC
GCTCAAGGTTATTACAAAGATGCCGGTAGTGAAGTCAGAGACGATCGTTG
CACGCCTAGCGAAGTTCACTCGCAAGCAGCTTCTAAACACAGCGGTCCGC
GTAGCGTGACACGTAGTGATCATATGAGCGCTGCACGCAGTGATCATCAC
AGTGACGTAAGATCACAATCGACGGGAATTAGTTACGGCAGTGACGGTAG
TAAAGGACGTTCTTCTTCttctaaaaataaaactgtTATCACGTATTATT
ACGGTAGTGAACCTATCCCGTACCGTATTAGCGTTCCGACTACGGAGGTT
ACGTTGTCACAATTCAAACTCGAAACCAAACGTGGTAATTATCGCTTTTT
TTTCAAGACTGTTTCCAGTGTCGATGGTGAGGTTGTTTGGGAAGAATTCA
AAAACGATGATGATGTCCTACCTAAATTTAATGATAAAATTGTTGGCAAA
GTCGATAAGATCTAATTGACTTTGGTTTTTGGATTTATTTGTTGTTATTG
TTTGGATTATTTCTCTTAATGATAATCATGACGGAATTGTTGTTAATGTG
GACCAAGTTTTGATTCTACCATAATGAACTTATaatatttatgacgtaat
gttttaaacAGAAGCACCCTAAAAGACCAAACAGCCGGTCTAATTTTGAA
TTAAACAATAAACTAGGCCCTGGCTATTTTGGGTGCTTGCGTCTGAAAAA
TTCCGACATGAATGATTGATCATGAATTGATAAATgcgttgtttttttat
atagaTCCTCGTGTTaatgattacgtcatgaatattattGTCCGCTTGGT
TATATTATCactgtcttttttttttcaaatttatgctCTGCATTTAAAAC
TTTATCACTATTTATATTTTGCCAATTCTTCTACCCCTGTTTGATACCCC
TAAatatttgttcaattttttaccTTCCTCGTACAGGTTCGGGAatcgaa
attcattttgacaaatttgaactttttgccaAGTGTCAAGATATTCTTTC
CTTGCTTACTCTTGGCTTTACCTTTCCAACTTTCTTCCTTTTTCCTTTTA
TATTCCttcctaaattttttaaaatagatattttacaattttctccCTTT
AAGTTAATATACAATATACTGAAaagagttttattttttactagATTTAT
CTTACTACCCCATGATTGTATGATATTTTAAGATAAACCCCGAAATATAC
CCCTTTATAATTACACCCCAATATtgtgaaaaaatgaaataatatcaaaa
aatacaacaaaaggaaaaatgtgaaaattaacaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011804XLOC_011804Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021045-exon-sc0000377-1491911889:139881..139916TCONS_00021045-exon-sc0000377-1491911889:139881..139916Clytia hemisphaericaexon
TCONS_00021045-exon-sc0000377-1510915933:139881..139916TCONS_00021045-exon-sc0000377-1510915933:139881..139916Clytia hemisphaericaexon
TCONS_00021045-exon-sc0000377-1575043694:139881..139916TCONS_00021045-exon-sc0000377-1575043694:139881..139916Clytia hemisphaericaexon
TCONS_00021045-exon-sc0000377-1491911889:140588..140785TCONS_00021045-exon-sc0000377-1491911889:140588..140785Clytia hemisphaericaexon
TCONS_00021045-exon-sc0000377-1510915933:140588..140785TCONS_00021045-exon-sc0000377-1510915933:140588..140785Clytia hemisphaericaexon
TCONS_00021045-exon-sc0000377-1575043694:140588..140785TCONS_00021045-exon-sc0000377-1575043694:140588..140785Clytia hemisphaericaexon
TCONS_00021045-exon-sc0000377-1491911889:141157..141833TCONS_00021045-exon-sc0000377-1491911889:141157..141833Clytia hemisphaericaexon
TCONS_00021045-exon-sc0000377-1510915933:141157..141833TCONS_00021045-exon-sc0000377-1510915933:141157..141833Clytia hemisphaericaexon
TCONS_00021045-exon-sc0000377-1575043694:141157..141833TCONS_00021045-exon-sc0000377-1575043694:141157..141833Clytia hemisphaericaexon
TCONS_00021045-exon-sc0000377-1491911889:143838..143972TCONS_00021045-exon-sc0000377-1491911889:143838..143972Clytia hemisphaericaexon
TCONS_00021045-exon-sc0000377-1510915933:143838..143972TCONS_00021045-exon-sc0000377-1510915933:143838..143972Clytia hemisphaericaexon
TCONS_00021045-exon-sc0000377-1575043694:143838..143972TCONS_00021045-exon-sc0000377-1575043694:143838..143972Clytia hemisphaericaexon
TCONS_00021045-exon-sc0000377-1491911889:144162..144246TCONS_00021045-exon-sc0000377-1491911889:144162..144246Clytia hemisphaericaexon
TCONS_00021045-exon-sc0000377-1510915933:144162..144246TCONS_00021045-exon-sc0000377-1510915933:144162..144246Clytia hemisphaericaexon
TCONS_00021045-exon-sc0000377-1575043694:144162..144246TCONS_00021045-exon-sc0000377-1575043694:144162..144246Clytia hemisphaericaexon
TCONS_00021045-exon-sc0000377-1491911889:147372..147494TCONS_00021045-exon-sc0000377-1491911889:147372..147494Clytia hemisphaericaexon
TCONS_00021045-exon-sc0000377-1510915933:147372..147494TCONS_00021045-exon-sc0000377-1510915933:147372..147494Clytia hemisphaericaexon
TCONS_00021045-exon-sc0000377-1575043694:147372..147494TCONS_00021045-exon-sc0000377-1575043694:147372..147494Clytia hemisphaericaexon
TCONS_00021045-exon-sc0000377-1491911889:147718..149964TCONS_00021045-exon-sc0000377-1491911889:147718..149964Clytia hemisphaericaexon
TCONS_00021045-exon-sc0000377-1510915933:147718..149964TCONS_00021045-exon-sc0000377-1510915933:147718..149964Clytia hemisphaericaexon
TCONS_00021045-exon-sc0000377-1575043694:147718..149964TCONS_00021045-exon-sc0000377-1575043694:147718..149964Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000377supercontigsc0000377:139881..149964 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.231866	0.233142	0	0	44.8822	35.362	29.3659	34.1791	0.780852	8.74997	4.58183	1.76336	6.95349	0.137237	1.20729	4.04921	18.4987	15.9373	7.49357	13.5568	16.0314	15.783	11.3145	12.5268	4.87031	7.47838	4.86377	5.77264	6.56641	8.76706
Blast
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BLAST of TCONS_00021045 vs. Swiss-Prot (Human)
Match: AXIN1 (Axin-1 OS=Homo sapiens GN=AXIN1 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 3.324e-17
Identity = 42/78 (53.85%), Postives = 55/78 (70.51%), Query Frame = 1 
Query: 2452 VITYYYGSEPIPYRISVPTTEVTLSQFK-LETKRGNYRFFFKTVS-SVDGEVVWEEFKNDDDVLPKFNDKIVGKVDKI 2679
            V+ YY+  EPIPYR  V    VTL QFK L TK+G+YR++FK VS   D  VV+EE + D+ VLP F +KI+GKV+K+
Sbjct:  784 VVAYYFCGEPIPYRTLVRGRAVTLGQFKELLTKKGSYRYYFKKVSDEFDCGVVFEEVREDEAVLPVFEEKIIGKVEKV 861
The following BLAST results are available for this feature:
BLAST of TCONS_00021045 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AXIN13.324e-1753.85Axin-1 OS=Homo sapiens GN=AXIN1 PE=1 SV=2[more]
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