TCONS_00021065 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00021065
Unique Name	TCONS_00021065
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1511

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000377:165561..171772-

transcript sequence

>TCONS_00021065 ID=TCONS_00021065|Name=TCONS_00021065|organism=Clytia hemisphaerica|type=transcript|length=1511bp
GTTTTAGAAagtggaaaataaaaataaatcttaAATTAGAATTAAAATCA
AAGGGAAATCTTTTTCGACAAATGTAAAGAACTAATGAAAGGACTGACTT
GAAGAAGATGAGTGAAGCAATATATTGGTGCATTTTAACATGTGTTTCCG
CCATTTTCATTTGCAGTCATATCGAAGGACTTCATCCATCAGGCGAAAAA
GATTGTGAGTTGGATCATTCTGATTGTAGAGATTGCTATAATGAAAGTGG
TATTCAATTTTGCCAGTGTAAACAGGGCTTTGTAGGAGATGGATATAATT
GTAGAGACAGGGATGAATGCACAACTGGATCGAACTTTTGTGATCAAAAC
GCACTTTGTATTAACACATTTGGAAGCTATCGTTGTTCATGTAACCAAGG
ATACACGGGAGATGGTAGAACTTGTACCTATTTCGACGAATGTAAACTTG
GTTTGGATGACTGCAGCAACGAGACGATATGCGTTAACACGGATAGCTTG
CAAGGATACAAATGTGCTTGCCAAGAAGGTCTGACCGGAGATGGAAAACA
TTGTTACGACTTAGACGAGTGTGAAGTTTATCCTTATATTTGTCCGAATA
TGTCTGAATGTAGAAATCAATATGGTAACTACAGCTGTGTGTGTGGTCAT
GGTTACGAACAAGATCATGGCGGACACGGTTGCAAAGATATAGACGAGTG
CGCGATGAACCAGAATTTCACTTATTGTCCACAGTATCATTCATgtataa
acaaagatggcggatatggTTGCGAATGTTTGGTCGACAATTGTCACCCT
GACAGAGTAGAGCCAAAGACCACTTCAAGCCAAAAGTTAAAATACGTCAT
CATTGGATCATCAACCGTGGCTGGTTGCATCATCTTGATCGTTGCCGTAA
CTTTCGTTGTCATCAAGTGTAAACGTAAAAGGTATGAAGGAAATAATTTT
ACGCGAAATTTCCGCCGTACGTCTGGGCGACGATATCATTTTAGTGACGC
CGACGCACCTTATATGCAGCATATAAACTTGCTTGAGCCAAATGGTGCAC
CAGTAGAACCTGTCGAATAAGTAATTTACAAataacaatttcataagaac
atgaGACTGACATTCTGAATagacttaaaaacaaattaagaCAAAACGAG
CCTGCTTCAGCATTCTGACCGTCATTGAGCTTCAtacttttataaaattg
ttcttaattccAAATCCCTCCTGGTCTGCTGGCTAACCACTTTTGTAGAG
GTCTACGACTCAGACTTTAATCCCCCTCTAGGTATTATTTCACTTAACAT
TTTTTAATCTTGTAGTTGATAGTTAACgttattgttttgttaatttgtTG
ATTTTCCAAATATTATTGATATAACTtaagagattttaaatatttttaca
aattaaggCCTTAAAATCTTAGTAAACGAATATGTTATTCTAAATGATAT
CAGAAGTTTATCACCTAGTGAAAGTTGATCCTTAGTTTGGGTAGTTCATC
CAGCAACAGAA

Run BLAST on NCBI

transcript from alignment at sc0000377:165561..171772-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00021065 ID=TCONS_00021065|Name=TCONS_00021065|organism=Clytia hemisphaerica|type=transcript|length=6212bp|location=Sequence derived from alignment at sc0000377:165561..171772- (Clytia hemisphaerica)
GTTTTAGAAAGTGGAAAATAAAAATAAATCTTAAATTAGAATTAAAATCA
AAGGGAAATCTTTTTCGACAAATGTAAAGAACTAATGAAAGGACTGACTT
GAAGAAGATGAGTGAAGCAATATATTGGTGCATTTTAACATGTGTTTCCG
CCATTTTCATTTGCAGTCATATCGAAGGTAAGGTTTCTTATAGTCAAAAT
GTCGAAATGCATTAATTCTCTAATCGTTTTGATAAATAAAGTAGCAGTGT
CATAAAACACACTAGGCTCGACATTGTAAAGCAAGGGTGATGGGTATACT
TTTGATCATTGAGCTCAAAGCCTCTCAAGGATAGATTTGAAATTTTTGGA
TGGAAAGTGAAGCCACTTATTATACCTGTTTAGTTTACATACAAACGCCA
GAGTAAAATCCATCGCAAAGAAAGGGCTAGATTCAATCTGTCATCCCAAA
AAACGGTGCAATCTTAAAGCTTCGCTTTTTCTTGCTTTGAGAAAGGTTGA
AGATTCCTCTCTAGCTCCTTCGAGGCTTTAACCTCAATGCTAGGGAAGTC
AATGAAGGGTCAGCCAGCTGTGAAGTTCAGGGTGATTGGTATACTTTTGG
TGGTACCTGGTGATGCGGCGAGGATAAGAAAGGCTCAATAAATAACCTAC
GGTACAATGACACATATAAGAAGCAATTTTCGAAAACACTTTAGGCAGTC
AATTGGAGACATTATACATATATGGAGTTAATTTGAGACACTTATTTTTG
TGTCCGCACACCAAAATTTGAAAGTGTTTAGTTTTTGTCGGCTTTATCCG
GCCTCATATACTACCTCTTTTTGTGTTTTAGGACTTCATCCATCAGGCGA
AAAAGATTGTGAGTTGGATCATTCTGATTGTAGAGATTGCTATAATGAAA
GTGGTATTCAATTTTGCCAGTGTAAACAGGGCTTTGTAGGAGATGGATAT
AATTGTAGAGGTAAGGCTCCATGCACGCAAATGTTACTTTTTCAACTTTA
AAAATTTTTGTTGCATAATTGGAACACGTCGCTTTTTTCAGCTTTGTCAT
CGAGTTTTGCTCCCATAGCTAATAGGTTTGGTGAATCCCTGCGACAGTGA
TGACATCTAGACTTTTAAAGGCCGATTTCGACTTTTTATTTTGTACCTTC
TATGAGCTGATGCCACAAAAGATGGGTGTGGGTGCGAGGATCAGACTGCA
GGACAGTCATTTTTCGTACTCACAAATTCGTGAAAGACTGACTGACAACA
GTCTGCGAGCAAAATGTCCACATAATGGAAAACGACCTTACTTAAGATAA
TAAAACAGTGTAAATGATTGGCTGTTCCATTTAATTTCCATACAGGGGTT
GGACGATCTTTTTGAAGTCAAAAAAGATTCCGCAGTCCCGATATGCGTGA
ATACCCTTGAAAATGGCAAAATTTGCAAAAGAAGCCTGAAATATTTTTTC
CATACCTTAAAAGTGAGGGTGTTCACAGACCCAATAGGATTTTTTCAGAG
AGTGGGGTTAAGATAACGGACTGAAACACGGTGGGGATTGATATTCTTAC
ATTTTTTTTATGCCTGGGGATTTTAATGGGAAAAATAGCATAATATTTTG
CATGGAGGATTGGTTTATTTGTTTATTTTAAGTGAGGACAATTATTGGGG
GTTAATTTTCCACCGGGGACGATATTTTGGCCAATTTTTCCAGTGGGGAG
GGGTCCTAGTGGGTTTGTGAGAAGGGGGTGTACTGAAATAAATCTTTTAC
CGCTGGAAGTTTTAGAATAACATTTTAGACTCTGGAAAAATTAAACAATA
CTTCTTTAGACCCCCGGGAAATTCTTCTGGGACTGCCCCCTGAAAACATT
CGTCCACCCCTTCCCCTGCATGGATATTAAAAGAAATGGTCGAATTCTCA
AGAATTTTCCTATACAGACAGGGATGAATGCACAACTGGATCGAACTTTT
GTGATCAAAACGCACTTTGTATTAACACATTTGGAAGCTATCGTTGTTCA
TGTAACCAAGGATACACGGGAGATGGTAGAACTTGTACCTGTAAGTTTTT
TTATTCTTTTTAGCTGTATTAAGTCAATCGTAGAAGAGGACCAAAAGAAA
ATAAACTTGATCCTCCCATGATCCTTTGAAGAGGTTAAAATGTAGATTTC
TATGTTTATTTCTCTGAAACTTTGAGCATGAAATATAAAACTCATCTTTT
CTCAAACTATCAAGGGTTGGGCTGTCAGATTATGGTTTGAGATTTACGAT
TTTGCGACCCTGTCAAAAATTTTTAAAGAAGAAACCTTGGTCAGTCTGCC
TGAGTGACCAGTTTTATAGACTGCTTCAAAGAAAGCTCAACTTTGATGAT
TAAGGTAGTCAATCCTTGAGTTCCATAACAAATAAGCACTTTTACCGTTC
TTGATATTACGGGTTATTCAAATCGCTTCAGTCACTTTACTATCCTCAAA
ATTGCAAATACATAAACTCGCTATTTACTAGATTTCGACGAATGTAAACT
TGGTTTGGATGACTGCAGCAACGAGACGATATGCGTTAACACGGATAGCT
TGCAAGGATACAAATGTGCTTGCCAAGAAGGTCTGACCGGAGATGGAAAA
CATTGTTACGGTAATTTATTTTATACAACATTTTGACATTTGAAATTTTG
AAACTCGTCAGAAAATCCACGCAGTTAAGAGAAGGGTAGTCCCACTTGCA
CCACTTTTAGATTTTACTGATAATGGACCTGATACAATCCTTTTTTGAGT
GCTATCAGAATCATTAAGAAACTATCAAAGGGACTAGGTTCGAGTTTACC
GAGGGTAATTTTAAAGATTCTTTTATTCTATGGAAATATCGTTCCATCAT
GATTGAAAACCTGATATGTGAAAACCTCAATTTGTCCTTTTTTCCGTCCT
TCAAAATATCTCTGAAAGCTACAGTACTGAAAACCAATCCGCAAATTGAA
TGGGTTCCATAATAAAAGTGGCCGGGGAGCTCAGTCGGTAGAGCATTCGC
CTTAAAATCTAAGGGTTGTGGGTTCGATCCCGGGTCACCGCCAACTCAGC
AGATGAGTACAATCAAGGTCGTAATATTTGAGAAAAAAGGGAAATCCGCC
GGGAAGTTTTGAAACCACAATCGATTTGTAAGTGCTCTAAAGTAGTTTCA
AAAAGTAGAGTTTTAACTCTGAGTTTTAACGCTATACTTAGGACCTTAGG
ATCTGAGGATCCAAAAGTTCAAAAATAGTCCAATAAGGCTCAGAATATAG
CCTGGAAGTCTACCAACCCCTCCCAAATTGAAATATTCGATTAAGGTAAA
GAGGTAGCCCAAAATCGACTTTCTCACCAGAACTTTAAATCTTGAAAAAG
GTTAAAATAACCGGAATTCTCATTATATTTCAACCATGATTGTAGCATAG
ATTGGGTAATCTGATCTAGGCGGTAAGTTATTGGGAGCTGAGAGTGGGTG
TGGCGCTCCCCCTCAGCATTCGATCTCCCAGGTCTAGCGCAAATAGAAAA
CGGGATGGACTCCCTCATTCCCGGCCTCGCCGACAGCCACCAGATGAATA
TACTTACTTGCTTACATAATAAAAAATCGTGGAGTCATGGTTCTTTGAAT
CGGTTCCTTCCGTGTCGAAAATCTAATTACCATACTCGGGTACATACAAT
TTCGTACCCAAAGAGGAACTTTTGATTTTATTAATTGACGTTCCCTTTCA
TTAAGCAACAACTGGCTTACGTTTCGCGTTTGGGTTCGGCCGGGTCATAA
ATTGGTACTCAACTTCTCCTTTTCTGAACTAAAGAGTTATGAAAAGTTGA
AAAATCCAAGTTTAGACAGCTAAAGAAATAAAGGAGCATTCGTTTCACTC
TCGACTGATACATACTGTCAGTGACAAACATATAACTCTCAAATTCGATA
TTTTTTTTCGCTGAGTCAGGGATGTCATGAATTTATCATTTACCTCTTTT
TTCATTCACTATAGACTTAGACGAGTGTGAAGTTTATCCTTATATTTGTC
CGAATATGTCTGAATGTAGAAATCAATATGGTAACTACAGCTGTGTGTGT
GGTCATGGTTACGAACAAGATCATGGCGGACACGGTTGCAAAGGTAAATC
CCTTCAAATGAAAAACATAGGTTTATGCTTAAGGGAGTTGGTCTCTATTA
CACTGATATGGCTTCTACAATCAGGTTCGTAATATATCGGATACTTTAAC
GTTTTTCAAAAGTAACTTAGCGCATTTTAAAATTATTTGTGTTGTTTAAA
GTTTTGCAGGGAATTTCCCCTTGTTATCAAATATCATTCTTTGATTGTAT
ATGGCTTCGGTTGTACATCGTTTCAAAAAAATGCACCCTTGAAATGAATA
GACTAGCTCGCACAAACTATCACAACACAACTTATTTGGTGGTTTTTGTT
TATACAAACAATCCTCAGTTGAAAATAAATAGACCTATATTGTTATATAT
GAATAAGTCTAAAACTATTTTTTTGGCCGGCTGGAAATATTTTCAATTAT
TAAATGTAATATCCATTTAACCCAATAAGTGGCATCATTCCACAAATTTA
AATTTAAGTTTTTATTTTAAATGCGTGTACATATACATCCTGGACTGGAC
TTTTTTCACTCATGGGAGGTAAAAAAACAGGTCTAGGCCTAACGGTACCA
GGACCGAAAAAACTAGAACGATCATATGATGCCAGTGGCACGTAATGGGT
AAAGGTACATGCATTGACGTATGTCGAATGTCTAACATATAAGATATAAA
AGATTTATGAAATGGTTGGTTGGGTGTCAGTTTTGGACAAAATCAAATAA
TTTTTTTTCTATCTCACTATAGATATAGACGAGTGCGCGATGAACCAGAA
TTTCACTTATTGTCCACAGTATCATTCATGTATAAACAAAGATGGCGGAT
ATGGTTGCGAATGTTTGGTCGACAATTGTCACCCTGACAGAGTAGAGCCA
AGTAAGAAAGAAATTTTAACTAGAATTTAGCTAAGTGGTTGCTAGTCTAG
TAAACCACGTCTTTGTATTTCGCTACATCTTATGCTTACACTGGGCTCAC
TACCTTCACCGAATATGCTAAATATAAATAAAATTCCACCGTTTCGAAAT
AAATAGCTTTCCACGGTGTAGGTTTTCCAAAGCACTTTTCCACGGAAAAT
TATCTTTTTCATAAGTAACTTTTTTCCCGCATTTCATTTTTTAAAAAGCA
GATGCTTGCTAGTCTGAGGCAGAATATTTCTTTTCAAAAACTTGTTATGT
AATGAACAAAAAACGGTTTTAAGGCCTGCGAAAGCCCAAGTTAAAAGAAC
GAAGAAAGTTTTAAATTGAGTAGAAATTTAATTTGGCAGGTTTTTGGTAA
ATCCGCCAGATTATTTTTAAGCTGATTTTTCAAGAGTGGATGGGTTTATG
ATGGTTTGTGACAAAAAATGTCAAACTGTTTTTATATTTTTTCTCTAAGA
GACANGGATGGGTTTATGATGGTTTGTGACAAAAAATGTCAAACTGTTTT
TACATTTTTTCTCTAAGAGACCACTTCAAGCCAAAAGTTAAAATACGTCA
TCATTGGATCATCAACCGTGGCTGGTTGCATCATCTTGATCGTTGCCGTA
ACTTTCGTTGTCATCAAGTGTAAACGTAAAAGGTATGAAGGAAATAATTT
TACGCGAAATTTCCGCCGTACGTCTGGGCGACGATATCATTTTAGTGACG
CCGACGCACCTTATATGCAGCATATAAACTTGCTTGAGCCAAATGGTGCA
CCAGTAGAACCTGTCGAATAAGTAATTTACAAATAACAATTTCATAAGAA
CATGAGACTGACATTCTGAATAGACTTAAAAACAAATTAAGACAAAACGA
GCCTGCTTCAGCATTCTGACCGTCATTGAGCTTCATACTTTTATAAAATT
GTTCTTAATTCCAAATCCCTCCTGGTCTGCTGGCTAACCACTTTTGTAGA
GGTCTACGACTCAGACTTTAATCCCCCTCTAGGTATTATTTCACTTAACA
TTTTTTAATCTTGTAGTTGATAGTTAACGTTATTGTTTTGTTAATTTGTT
GATTTTCCAAATATTATTGATATAACTTAAGAGATTTTAAATATTTTTAC
AAATTAAGGCCTTAAAATCTTAGTAAACGAATATGTTATTCTAAATGATA
TCAGAAGTTTATCACCTAGTGAAAGTTGATCCTTAGTTTGGGTAGTTCAT
CCAGCAACAGAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_011810	XLOC_011810	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000377	supercontig	sc0000377:165561..171772 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0.0688125	0.028442	0	0.0362949	12.7714	6.59625	11.3126	20.0524	13.1044	10.8941	0.0289659	0.151554	0	0.0766353	0.124971	0.312446	0	0	0	0	1.54973	3.21771

Blast

[Close]

BLAST of TCONS_00021065 vs. Swiss-Prot (Human)
Match: FBN1 (Fibrillin-1 OS=Homo sapiens GN=FBN1 PE=1 SV=3)

HSP 1 Score: 129.413 bits (324), Expect = 2.477e-31
Identity = 89/209 (42.58%), Postives = 114/209 (54.55%), Query Frame = 3

Query:  201 DCELDHSDCRD---CYNESGIQFCQCKQGFVGDGYNCRDRDECTTGSNFCDQNALCINTFGSYRCSCNQGYTGDGRTCTYFDECKLGLDDCSNETICVNTDSLQGYKCACQEGL--TGDGKHCYDLDECEVYPYICPNMSECRNQYGNYSCVCGHGYEQDHGGHGCKDIDECAMNQNFTYCPQYHSCINKDGGYGCECLVD-NCHPDRV 809
            +CE+   +C     C N +G   C C  G++GDG  C D DEC+ G++ C Q+A C NT GSYRC C +GYTGDG TCT  DEC   L+ C N   C+N     GY+C C  G   + DGK C D+DEC + P IC     C N  G + C C  GYE D  G  C D++EC    + T C    +C+N  G Y C+C  D   +P RV
Sbjct: 1325 ECEIGAHNCGKHAVCTNTAGSFKCSCSPGWIGDGIKCTDLDECSNGTHMCSQHADCKNTMGSYRCLCKEGYTGDGFTCTDLDECSENLNLCGNGQ-CLNAPG--GYRCECDMGFVPSADGKACEDIDECSL-PNIC-VFGTCHNLPGLFRCECEIGYELDRSGGNCTDVNECL---DPTTCIS-GNCVNTPGSYICDCPPDFELNPTRV 1524

HSP 2 Score: 118.242 bits (295), Expect = 8.259e-28
Identity = 77/199 (38.69%), Postives = 105/199 (52.76%), Query Frame = 3

Query:  201 DCELDHSDCRD--CYNESGIQFCQCKQGFVGDG--YNCRDRDECTTGSNFCDQNALCINTFGSYRCSCNQGYTGDGRTCTYFDECKLGLDDCSNETICVNTDSLQGYKCACQEGLTGDGKHCYDLDECEVYPYICPNMSECRNQYGNYSCVCGHGYEQDHGGHGCKDIDECAMNQNFTYCPQYHSCINKDGGYGCECLV 785
            +C+L+ + C    C N  G   C C  G+ G      C D +EC  G++ C ++A+C NT GS++CSC+ G+ GDG  CT  DEC  G   CS    C NT  +  Y+C C+EG TGDG  C DLDEC     +C N  +C N  G Y C C  G+     G  C+DIDEC++         + +C N  G + CEC +
Sbjct: 1283 ECDLNPNICLSGTCENTKGSFICHCDMGYSGKKGKTGCTDINECEIGAHNCGKHAVCTNTAGSFKCSCSPGWIGDGIKCTDLDECSNGTHMCSQHADCKNT--MGSYRCLCKEGYTGDGFTCTDLDECSENLNLCGN-GQCLNAPGGYRCECDMGFVPSADGKACEDIDECSLPNICV----FGTCHNLPGLFRCECEI 1474

HSP 3 Score: 106.301 bits (264), Expect = 5.942e-24
Identity = 79/220 (35.91%), Postives = 109/220 (49.55%), Query Frame = 3

Query:  144 VSAIFICSHIEGLHPSGEK--DCELDHSDCR--DCYNESGIQFCQCKQGFVGD--GYNCRDRDECTTGSNFCDQNALCINTFGSYRCSCNQGYT--GDGRTCTYFDECKLGLDDCSNETICVNTDSLQGYKCACQEGLTGDGKHCYDLDECEVYPYICPNMSECRNQYGNYSCVCGHGYEQDHGGHGCKDIDECAMNQNFTYCPQYHSCINKDGGYGCEC 779
            V+   +C H  G   +G    +C++ H  CR  +C N+ G   C CK G+  D  G +C D +EC      C  N +C NT GSY+CSC +GY    DGR+C   DEC     +C  + +CVNT  + G+ C C  G T     C D +EC     +C +   C+N  G+++C C  G+  D  G  C+D+DEC  N         H C N  GGY C C
Sbjct: 2384 VAFKKLCPHGRGFMTNGADIDECKVIHDVCRNGECVNDRGSYHCICKTGYTPDITGTSCVDLNECNQAPKPC--NFICKNTEGSYQCSCPKGYILQEDGRSCKDLDECATKQHNC--QFLCVNT--IGGFTCKCPPGFTQHHTSCIDNNECTSDINLCGSKGICQNTPGSFTCECQRGFSLDQTGSSCEDVDECEGNHRCQ-----HGCQNIIGGYRCSC 2592

HSP 4 Score: 93.9745 bits (232), Expect = 5.493e-20
Identity = 78/241 (32.37%), Postives = 108/241 (44.81%), Query Frame = 3

Query:  201 DCELDHSDCRDCYNESGIQFCQCKQGFVGDGYN-CRDRDECTTGSNFCDQNALCINTFGSYRCSCNQGY--TGDGRTCTYFDECKLGLDDCSNETICVNTDSLQGYKCACQEGLTGDGKHCYDLDECEVYPYICPNMSECRNQYGNYSCVCGHGYEQDHGGHGCKDI-----------DECAMNQNFTYCPQYHSCINKDGGYGCECLVDNCHPDRVEPKTTSSQKLKY---VIIGSSTVA 872
            +CE D      C N  G   C+C  GF+    N C D DEC +G+    +N  CINT GS++C CN+GY    DGRTC   +EC L    C+  T C N D    Y+C C  G +   + C D+DEC   P IC  +  C N  G++ C+C  G+     G  C+D+            +C+  ++  +  Q   C  K  G+G     D C     EP     Q   Y   +I+G    A
Sbjct: 1894 ECERDACGNGTCRNTIGSFNCRCNHGFILSHNNDCIDVDECASGNGNLCRNGQCINTVGSFQCQCNEGYEVAPDGRTCVDINECLLEPRKCAPGT-CQNLDG--SYRCICPPGYSLQNEKCEDIDECVEEPEICA-LGTCSNTEGSFKCLCPEGFSLSSSGRRCQDLRMSYCYAKFEGGKCSSPKSRNHSKQECCCALKGEGWG-----DPCELCPTEPDEAFRQICPYGSGIIVGPDDSA 2125

HSP 5 Score: 90.1225 bits (222), Expect = 1.105e-18
Identity = 70/201 (34.83%), Postives = 97/201 (48.26%), Query Frame = 3

Query:  201 DCELDHSDCRD--CYNESGIQFCQCKQG--FVGDGYNCRDRDECTTGSNFCDQNALCINTFGSYRCSCNQGY--TGDGRTCTYFDECKLGLDDCSNETICVNTDSLQGYKCACQEG--LTGDGKHCYDLDECEVYPYICPNMSECRNQYGNYSCVCGHGYEQDHGGHGCKDIDECAMNQNFTYCPQYHSCINKDGGYGCEC 779
            +C+ D   CR   C+N  G   C+C  G     +   C D +EC   ++ C  N  C+N  G Y+C+CN GY  T D   C   DEC +    C  ET C N++    Y+C+CQ G  L  D + C D+DECE  P IC +  +C N  G Y C+C  G+        C D++EC +N N        +C N  G + C C
Sbjct: 1116 ECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACIDINECELSAHLC-PNGRCVNLIGKYQCACNPGYHSTPDRLFCVDIDECSIMNGGC--ETFCTNSEG--SYECSCQPGFALMPDQRSCTDIDECEDNPNIC-DGGQCTNIPGEYRCLCYDGFMASEDMKTCVDVNECDLNPNICL---SGTCENTKGSFICHC 1307

HSP 6 Score: 88.5817 bits (218), Expect = 2.748e-18
Identity = 75/219 (34.25%), Postives = 101/219 (46.12%), Query Frame = 3

Query:  159 ICSHIEGLHPSGEKDCELDHSDCRD--------CYNESGIQFCQCKQGFVGDGYNCRDRDECTTGSNFCDQNALCINTFGSYRCSCNQGY-TGDGRTCTYFDECKLGLDDCSNETICVNTDSLQGYKCACQEG--LTGDGKHCYDLDECEVYPYICP-NMSECRNQYGNYSCVCGHGYEQDHGGHGCKDIDECAMNQNFTYCPQYHSCINKDGGYGCEC 779
            IC +  G+   G  D  +D  +C++        C N  G   C+C  G++  G  C D DEC+ G N C  N  C N  G + C+C +G+  G   TC   +EC      C+    CVNT     Y+C C  G  L  D + C D DECE   + C     EC+N  G Y C+CG GY++   G GC D +EC          +   C+N  G Y CEC
Sbjct: 2110 ICPYGSGII-VGPDDSAVDMDECKEPDVCKHGQCINTDGSYRCECPFGYILAGNECVDTDECSVG-NPCG-NGTCKNVIGGFECTCEEGFEPGPMMTCEDINECAQNPLLCAFR--CVNT--YGSYECKCPVGYVLREDRRMCKDEDECEEGKHDCTEKQMECKNLIGTYMCICGPGYQRRPDGEGCVDENECQTKPGIC---ENGRCLNTRGSYTCEC 2318

HSP 7 Score: 85.5001 bits (210), Expect = 2.779e-17
Identity = 66/186 (35.48%), Postives = 94/186 (50.54%), Query Frame = 3

Query:  234 CYNESGIQFCQCKQGFVGDGYNCRDRDECTTGSNFCDQNALCINTFGSYRCSCNQGYTGD--GRTCTYFDECKLGLDDCSNETICVNTDSLQGYKCACQEGLTG--DGKHCYDLDECEVYPYICPNMSECRNQYGNYSCVCGHGYEQDHGGHGCKDIDECAMNQNFTYCPQYHSCINKDGGYGCEC 779
            C N  G   C+C  GF     +C D +ECT+  N C    +C NT GS+ C C +G++ D  G +C   DEC+ G   C +   C N   + GY+C+C +G         C D +EC +  +IC   S C N  G+Y C+C  G++ +    GC+DI+EC   Q     P  + C N +GGY C C
Sbjct: 2500 CVNTIGGFTCKCPPGFTQHHTSCIDNNECTSDINLCGSKGICQNTPGSFTCECQRGFSLDQTGSSCEDVDECE-GNHRCQHG--CQNI--IGGYRCSCPQGYLQHYQWNQCVDENEC-LSAHICGGAS-CHNTLGSYKCMCPAGFQYEQFSGGCQDINECGSAQA----PCSYGCSNTEGGYLCGC 2674

The following BLAST results are available for this feature:

BLAST of TCONS_00021065 vs. Swiss-Prot (Human)

BLAST of TCONS_00021065 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
FBN1	2.477e-31	42.58	Fibrillin-1 OS=Homo sapiens GN=FBN1 PE=1 SV=3	[more]

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TCONS_00021065 (transcript) - C. hemisphaerica