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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021247 ID=TCONS_00021247|Name=TCONS_00021247|organism=Clytia hemisphaerica|type=transcript|length=370bp
AATTCTTAGTAGCTGTTTCTTTTTCATCACTTATCTTTTGTACCTTTATC
TCCTGTTCCACCTTTTTTCTATCCATGCTATCAATTTTgtattgcaaaat
tttggccctcTTAGATCTATTTTCTTTTACtagctttcttttatttttcc
gtGCCATTGCAATCAAGAACTTGATTTCCTCTTCACTCTTACTCAACAGC
CAATCATTTGTCTTATTCTGACTGTACATAATCGCACCAGCAACTGCTAA
GGTTGTCATGTTTGGTTTCATGCTCAAGATTCTGTCCAATGAGGCGAACG
CACGCTCAGGAGCTAAATTATGCCTAGGACAGTTGGTTGTCtatttcaca
attttttcacttgGCTGAAA Run BLAST on NCBI transcript from alignment at sc0000380:32628..33642+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021247 ID=TCONS_00021247|Name=TCONS_00021247|organism=Clytia hemisphaerica|type=transcript|length=1015bp|location=Sequence derived from alignment at sc0000380:32628..33642+ (Clytia hemisphaerica)
AATTCTTAGTAGCTGTTTCTTTTTCATCACTTATCTTTTGTACCTTTATC
TCCTGTTCCACCTTTTTTCTATCCATGCTATCAATTTTgtattgcaaaat
tttggccctcTTAGATCTATTTTCTTTTACtagctttcttttatttttcc
gtGCCATTGCAATCAAGAACTTGATTTCCTCTTCACTCTTACTCAACAGC
CAATCATTTGTCTTATTCTGACTGTACATAATCGCACCAGCAACTGCTAA
GGTTGTCATGTTTGGTTTCATGCTCAAGATTCTGTCCAATGAGGCAAACG
CACGCTCAGGAGCTAAATTATGNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgggggggggggtac
ttaggcaaaaataggtgctgggaatgtgcggacggtaagggtcgggtttt
tcacctttcaaagtctctctaagggttacaaaaatcaggaaatttcaaag
gaGACTACTCTTTccctctaagggtgggaaaaatcacgatttttagaaaa
aaaaatttgattttgagagaaaaaattacaaaaaagtctcactaggggta
ggaaatttttgaaaatcacagaaaatttttcgaaaaagtctctctaaggg
tcaccttttcactaaaatttggtctctctaagggtcggttttggGAGGTc
ctgtccgcacatacccctcattcaccaaccctagtaccccccccccNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCGGGTAAGGTTG
TCATGTTTGGTTTCATGCTCAAGATTCTGTCCAAGGAGGCGAACGCACGC
TCAGGAGCTAAATTATGCCTAGGACAGTTGGTTGTCtatttcacaatttt
ttcacttgGCTGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021247-exon-sc0000380-1491911889:32628..32920 | TCONS_00021247-exon-sc0000380-1491911889:32628..32920 | Clytia hemisphaerica | exon |
| TCONS_00021247-exon-sc0000380-1510915933:32628..32920 | TCONS_00021247-exon-sc0000380-1510915933:32628..32920 | Clytia hemisphaerica | exon |
| TCONS_00021247-exon-sc0000380-1575043694:32628..32920 | TCONS_00021247-exon-sc0000380-1575043694:32628..32920 | Clytia hemisphaerica | exon |
| TCONS_00021247-exon-sc0000380-1491911889:33566..33642 | TCONS_00021247-exon-sc0000380-1491911889:33566..33642 | Clytia hemisphaerica | exon |
| TCONS_00021247-exon-sc0000380-1510915933:33566..33642 | TCONS_00021247-exon-sc0000380-1510915933:33566..33642 | Clytia hemisphaerica | exon |
| TCONS_00021247-exon-sc0000380-1575043694:33566..33642 | TCONS_00021247-exon-sc0000380-1575043694:33566..33642 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000380 | supercontig | sc0000380:32628..33642 + |
Blast
The following BLAST results are available for this feature:
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