TCONS_00021386 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021386
Unique NameTCONS_00021386
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4528

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021386 ID=TCONS_00021386|Name=TCONS_00021386|organism=Clytia hemisphaerica|type=transcript|length=4528bp
ttcaGAACTAACCAGTAAAAAAAGAATAATAGAAAATAAGAATTATGGAT
TCATATTTGGACATACCACGTGTGGCTTGGGAAGCTGATCACGAATGGCA
TGCACGAAGATCCTTTCTAGAATCCAATCAAGAGTTCTTCAGTGGTGATA
AACTAGCATCTTTGTCAATGGCATGGAGTAATTGGATATTCATGGGATGT
AACTATGGCGAACAAGTACAAGCAACATTAGAAGATTGTCATGCTAGACT
GCCACCAGAAGTGGATGAGAACATCAAAAAGCTTTTAGATGCTGCCACAC
CCAAAGTGAAATTTGTCAAAGCGTCTGGTAGTGGTGAAGATCTAGGCACA
CGAACGGGTCCCCCGCAAGGTAAAAAGAAGTGGTAAAAGAAAACTAAACA
CACCCCAAGAacattattcaaaatatttcaaaaaagacaCAACAGAATCA
GaaaacacaacaacaacaacaacaacaaatataGACGTGAACCATCCAAA
CCATATCCGAGGATTAAAGATTTATTTACCATCAAAAGAAATGGAGAATC
AAATAGCTGGGGAATCTGGAAATTACATATTGAGTACGATCGGTGCTGTA
AACGAAAGTTGTCAAAAATGcaagaaaataaatgaatacGTCGAAGAAAT
GACGTTAGATAAGTATAAGTGTACGTTATACGTAGACGGGCGTATGATAG
CGCAATCTTACGGGGAAAACAAGAAAGATACTAAAAGACTCTGTGCTGAA
AAGGGACTTGATTATTTGAAGAAATACCAGGAGATTGTTTACAAAGATCG
AATCAACCATGATAAAGTAACTGAAATTGACAAGGGGAATTTAGTTAAGG
AATCTTATGAAAATGCACCCAAGATTGCTGATGATAACTTAGGTAGTAAA
TTGTTAAAGAAAATGGGCTGGGACGGGAGTAGCGGTGTTGGTAAGTACTC
GCACGGCATTAGTGAACCCGTTTTTGTTGAATCCGTTGAAAATCGGGTTG
GTTTCGGACACAGCTATGACGATCGGACTGTCCGAAAAAGTTCAGTGGAA
AGCACTTTGTTGGATTTCTTAAGAGACTCCAAACAAGAGGagattaagtt
ttcaaagaacttAACGAAAGAAGATCGTGCCTTGGTTCATCGGCTTTGTA
CTAAATATCATCTGAAGCATAAATCGTTTGGTAAAAATGAGGATCGTTAT
TTATTAGTCAGTAAACAGTAGtttttcttcttgtaataatacATTATACa
cgttttgttataagaacaaaagaacaTTAGACTTCGATGTCCAAaatatt
atgaacagtttaagACTAAAACATGTTGAacgttcttataagaaaacatg
tatccactttttggacctaccccgccggtgggtggaggtcctttaaatta
accgatgttagtccgttcgtccgtccgttcgtctgtttgTCTGTTGCCaa
tctcgggattggctcattagttttttctgattttttgcacagtgatgcaa
aatggtgattcccagaaagtgacggagctcgattttcgaaaagaaaacat
tctggGCAAATTTGAGCCTAAAAGTGCTtaaaatgggtttttttggactt
tgtgcgaAATCACTTCAttatagttttttctgattttattcATAAAGATG
GAAGGTTCTCTAAAATACGGCTGAAtcagtttttttcggaaatttttttt
cggccgTATAAATCGGGTTTTCTTGTTTAGGCAAATTCCCTTTTGCcata
tttagggaaaattagcatttctcgagattggcttggtattttttcttatt
ttttacctAGCGAtttaaaatggtaatatttaatttctgattgaggccga
ttttggaaaaaatgattttttggaTAAATTTGGATCTTCACTAGGGAAAT
CacgctaaaatatttattcacccCAGTATCTACGACTATAAGTCATACGA
CTTTAACTATACTTCACAGTTCGATTTTAATTTGAGCTGTGATACCATGA
Aggtaatctattcaagctgctcgctacacttttttactctcttgctatct
gtcctatttttatctgattctcatcatcaggtaggtccattgaGCATTTT
GCTTGTTCTACTTATcactatctaactttcatcatcaggtaggttcagca
tctagcttgttatccctagttttattttattttctattttcaccTCTGCT
ATATATAAAGTGTATGTGTGATTTTGTTCGAAAGTGAGAAAATCGATTAA
ATATTTGTAGTTGTTAATTGTATTTACTgtgaaactaaaaatttttatgc
tttttccatttttatgtattttgccACCCCTAATAAAAGCTTTAAAGCtt
ggtatttaaaaaaagtggcGTTTAACTCTATTCGCGTGCGTTTAACACTA
GACGCACGCGTTTAACATTAAACGCCCGTACCTAGTGAAAAAAGTTAAAC
GCAcatatctaaaaattttgatacGTGCGACGTTTCactttttccctctt
tttcgaTATCTCTTTGCTAAAAAGCTCCCAGTGAGTACATAGATGATCTA
AAAACTTAAACGCCCGTGACTAACATTAGACGTGCGCGACAACTGTTAAA
CGTCACTTTTTTAATACGTGAGTACCGCGGTGCATGTCTGGGATCGAAGT
CTTTACAAGTTTACACTACTACCGGCTTAGTGAAGCTCAAATtacagatg
tagaacgataaacttgGTATACATTTAAAATGTGTAGTCGATGCTGCTTG
AATGTTTTCCTTTTACTTATTTCAAACTTTATACgcgtactcttaggtgc
caaataaacgggaccccccgtttataaatttttgaaaaaattcccagctc
ccaaaagaaaagtttcttgttttactctaaaaagcctaaatttggtctat
tttgacactttttagggtttttaaaaagtccattttccaaccccccggta
attaggtccccctcgtttatttgatttgaaaaatttttccaacccctcCC
CCCCCCCGTTTATTTGGCACCTAAGAGTAGTAACCTTCAATACATTTTCT
TTCTAGAGAAAAATAAAAAATACAAGAACTACAAATTCCAGGATATAAAA
ATTTGATTAAGAAAATGAGTCGAGCTCACATGCTTTATGATGACACAAAA
ATGTCAGCATTGCCTGTTAAAATCACCAGATTGCAAACAGCTTGGGAACC
GAACACAATCTTTAAAATGAGTGGTACAGGATACATTATTGAAGCCAATA
TTTTAGGAAAATCTAAACACCAAATCGTGGAAAGCAGTAAAAAGtttcat
tACATTTGCTTGCACATCTCCAtactaaaatcttttaaacgaaaatttga
CTCGAATGGCGAAGAAATTGAGCCAGACCTTGGTGACAAAAAGAAGGTTA
ATACTGGATATTTAATGTCCTCTTATAAGGATGTTTCAAAAGAAGGTGAG
GATGTTATAAAACCAGCGGAGATGAAGAAACTGTTATATACTTCAAAAGA
CTTGGAAAACATTCTTGATGGCAAGTTACAGGCCTATAATCACGCGAACT
ACGTTTCAGCCATCTGGTGcgaagaaaaaagtttagaagGGGTCGAATTA
CCAAATGGCTCGAAAGTCAGATTAAGAACGAAAGGAAACGGCTGTTATTT
AGAATCAATCATATGCTTGGATGAAGAATTAACGACTAAACAGAATTTCA
CAACACACGATTCAGTGGGTGGCTCATGGACTGACAAAGTGTTGAATACC
AAAGATACCAAGGGTGCGCAATCACATTTAAGTCAAGAGAGTGAGGCCGT
TGATGATGACGAATGGgaTGATTAACGGATGTCGCAATCATGTCCGATTC
GaCGTTAGTGGATAGCTCACCGATCAACTGAATACTGCTTTCAAACATTT
AAGCTGACTGGCGGACAACTGACTTGACATACTGTAAACTTACACTGTTT
GACTTTGGGACAGACTGACTACACTACGCACTGACATTCTTCGGTTATAA
CAAAACTTGATTACTGTTCAAACATTCTCTATCTACAatttattatccga
cgcgcgtaaatagcggCATTTAATTAACTTCTTTTCtttccaatattttc
gaatatatagcttccgtaaattaaaaaaattggaatTATATTTGAAAACG
AATAATATATAATTATTAGCAATAATATTTTAGCAATGAACTgctaataa
accatttatttggacgcagtctcatccgACATGAAAGATATTGGATTCAA
CTTTGTCTAATAATTGCTGGACATAAGCAGAATAGAATTTCTAAATCATA
AAATCCTCTGCTAAAACTCGTTGTCTTACTAGATTGAAACCCCGTACATT
AAAAATCCTTTATTCGTTCAAAAGACATCTGATTCCCCACGCCCGCGcaa
aacgccggattgaaagtaaaatctatcgctagatttcaaaatatgcagtc
ctcaaaaacttaggaaccgctagatactaCAATCCCTCGTCGTGATTGGg
ggcgcgttctaggcgcgttctggatggg
Run BLAST on NCBI

transcript from alignment at sc0000385:462995..476599-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021386 ID=TCONS_00021386|Name=TCONS_00021386|organism=Clytia hemisphaerica|type=transcript|length=13605bp|location=Sequence derived from alignment at sc0000385:462995..476599- (Clytia hemisphaerica)
TTCAGAACTAACCAGTAAAAAAAGAATAATAGAAAATAAGAATTATGGAT
TCATATTTGGACATACCACGTGTGGCTTGGGAAGCTGATCACGAATGGCA
TGCACGAAGATCCTTTCTAGAATCCAATCAAGAGTTCTTCAGTGGTGATA
AACTAGCATCTTTGTCAATGGCATGGAGTAATTGGATATTCATGGGATGT
AACTATGGCGAACAAGTACAAGGTATATGAGAATTTCTTGATTTTTTAAT
TTTGAAAGATGCCATTTTTGCAGGAGACTTTCCGGATTTGGAGCTCTCTG
ACATTTTGGTGTGTTGAAAGCGATTACTATGTATTACAAGGCATTTTCCA
GGGTGATTTTCCAAGGTTTTTCTTGGTAATCGGCTTCTAAGTAGGGGGTG
GGAAAATCACCTAGTTAAGAGGTGATGGTAGGGTTAGTACCCTTTATGGC
TATAAGTATGCCGCGGCCATAATATACCCCCAGGCTTATACCAGAGAGGA
ATTTGTTTCTGTAAGAACATCAATAAAATAAATTTCTGACGTCTGACGTC
AATCATCACACTGGTACACTGGTACCCAGCCTCTTTGCGCTTTAAGGATG
TTGATAATAATAGGTGTATGTAGAAAATTTAATATTTCGTTTTTCGGGGA
CTGATTTTGTGGATGATTGATTTCTGGAAACCAGTGAAATTCCTGAAAAA
TTTGAAATTTGGTGAGGAATTTTACTTTAATTTAGTGAGTCAGCATTTTT
TAAATTTCGGGGACAACGAATAACTAAAGGTATATTATTGCAATTTCTGT
CTTTTCATAGCAACATTAGAAGATTGTCATGCTAGACTGCCACCAGAAGT
GGATGAGAACATCAAAAAGCTTTTAGATGCTGCCACACCCAAAGTGAAAT
TTGTCAAAGCGTCTGGTAGTGGTGAAGATCTAGGCACACGAACGGGTCCC
CCGCAAGGTAAAAAGAAGTAAGAACTCTATTGTTCTATTCTTTTACTATC
CATATCTCACAAGCCTGCAATTTAAAAAAAAAATTAGACCCGAATACTCA
CAAAGTGATGAAAATAAGAACACTTTATGACTTAGTTTTGACTTAAATCC
CAGAAAAGCTAAGAACAACTTAAGGTCTACGTTCTTATGAAAATGAAACA
GAGAAAAACGTGTATTTCAACGAAAGAACCCCTTTTTTATAATCTTAAAT
TTGCTTAATATAGAAATCTAGATGATGAAAGCAATTTTAACGAAGCTATA
CCAAATCACTGTCGTTTTACGGGATGGATATCTCTAATTTTCTTTTCGAT
TTTCTCAAACGTATTTTGATAGTTATTGTGTCTGACGTATCTTTGATCTA
TTTATGGACTTTAAATAGCATTTTTAACGCTAACTAGGGTGATGTTTAAT
GTTTTTTCCCAATATTTTAAAAAACTTCTTAGGTTTGCTTAGGTGCTCTC
CCCGATTAGTTTTTATTTATTGTCTACGTTTCTATATTTTCAAGGTGGTA
AAAGAAAACTAAACACACCCCAAGAACATTATTCAAAATATTTCAAAAAA
GACACAACAGAATCAGAAAACACAACAACAACAACAACAACAAATATAGA
CGTGAACCATCCAAACCATATCCGAGGATTAAAGATTTATTTACCATCAA
AAGAAATGGAGAATCAAATAGCTGGGGAATCTGGAAATTACATATTGAGT
ACGATCGGTGCTGTAAACGAAAGTTGTCAAAAATGCAAGAAAATAAATGA
ATACGTCGAAGAAATGACGTTAGATAAGTATAAGTGTACGTTATACGTAG
ACGGGCGTATGATAGCGCAATCTTACGGGGAAAACAAGAAAGATACTAAA
AGACTCTGTGCTGAAAAGGGACTTGATTATTTGAAGAAATACCAGGAGAT
TGTTTACAAAGATCGAATCAACCATGATAAAGTAACTGAAATTGACAAGG
GGAATTTAGTTAAGGAATCTTATGAAAATGCACCCAAGATTGCTGATGAT
AACTTAGGTAGTAAATTGTTAAAGAAAATGGGCTGGGACGGGAGTAGCGG
TGTTGGTAAGTACTCGCACGGCATTAGTGAACCCGTTTTTGTTGAATCCG
TTGAAAATCGGGTTGGTTTCGGACACAGCTATGACGATCGGACTGTCCGA
AAAAGTTCAGTGGAAAGCACTTTGTTGGATTTCTTAAGAGACTCCAAACA
AGAGGAGATTAAGTTTTCAAAGAACTTAACGAAAGAAGATCGTGCCTTGG
TTCATCGGCTTTGTACTAAATATCATCTGAAGCATAAATCGTTTGGTAAA
AATGAGGATCGTTATTTATTAGTCAGTAAACAGTAGTTTTTCTTCTTGTA
ATAATACATTATACACGTTTTGTTATAAGAACAAAAGAACATTAGACTTC
GATGTCCAAAATATTATGAACAGTTTAAGACTAAAACATGTTGAACGTTC
TTATAAGAAAACATGTATCCACTTTTTGGACCTACCCCGCCGGTGGGTGG
AGGTCCTTTAAATTAACCGATGTTAGTCCGTTCGTCCGTCCGTTCGTCTG
TTTGTCTGTTGCCAATCTCGGGATTGGCTCATTAGTTTTTTCTGATTTTT
TGCACAGTGATGCAAAATGGTGATTCCCAGAAAGTGACGGAGCTCGATTT
TCGAAAAGAAAACATTCTGGGCAAATTTGAGCCTAAAAGTGCTTAAAATG
GGTTTTTTTGGACTTTGTGCGAAATCACTTCATTATAGTTTTTTCTGATT
TTATTCATAAAGATGGAAGGTTCTCTAAAATACGGCTGAATCAGTTTTTT
TCGGAAATTTTTTTTCGGCCGTATAAATCGGGTTTTCTTGTTTAGGCAAA
TTCCCTTTTGCCATATTTAGGGAAAATTAGCATTTCTCGAGATTGGCTTG
GTATTTTTTCTTATTTTTTACCTAGCGATTTAAAATGGTAATATTTAATT
TCTGATTGAGGCCGATTTTGGAAAAAATGATTTTTTGGATAAATTTGGAT
CTTCACTAGGGAAATCACGCTAAAATATTTATTCACCCCAGTATCTACGA
CTATAAGTCATACGACTTTAACTATACTTCACAGTTCGATTTTAATTTGA
GCTGTGATACCATGAAGGTAATCTATTCAAGCTGCTCGCTACACTTTTTT
ACTCTCTTGCTATCTGTCCTATTTTTATCTGATTCTCATCATCAGGTAGG
TCCATTGAGCATTTTGCTTGTTCTACTTATCACTATCTAACTTTCATCAT
CAGGTAGGTTCAGCATCTAGCTTGTTATCCCTAGTTTTATTTTATTTTCT
ATTTTCACCTCTGCTATATATAAAGTGTATGTGTGATTTTGTTCGAAAGT
GAGAAAATCGATTAAATATTTGTAGTTGTTAATTGTATTTACTGTGAAAC
TAAAAATTTTTATGCTTTTTCCATTTTTATGTATTTTGCCACCCCTAATA
AAAGCTTTAAAGCTTGGTATTTAAAAAAAGTGGCGTTTAACTCTATTCGC
GTGCGTTTAACACTAGACGCACGCGTTTAACATTAAACGCCCGTACCTAG
TGAAAAAAGTTAAACGCACATATCTAAAAATTTTGATACGTGCGACGTTT
CACTTTTTCCCTCTTTTTCGATATCTCTTTGCTAAAAAGCTCCCAGTGAG
TACATAGATGATCTAAAAACTTAAACGCCCGTGACTAACATTAGACGTGC
GCGACAACTGTTAAACGTCACTTTTTTAATACGTGAGTACCGCGGTGCAT
GTCTGGGATCGAAGTCTTTACAAGTTTACACTACTACCGGCTTAGTGAAG
CTCAAATTACAGATGTAGAACGATAAACTTGGTATACATTTAAAATGTGT
AGTCGATGCTGCTTGAATGTTTTCCTTTTACTTATTTCAAACTTTATACG
CGTACTCTTAGGTGCCAAATAAACGGGACCCCCCGTTTATAAATTTTTGA
AAAAATTCCCAGCTCCCAAAAGAAAAGTTTCTTGTTTTACTCTAAAAAGC
CTAAATTTGGTCTATTTTGACACTTTTTAGGGTTTTTAAAAAGTCCATTT
TCCAACCCCCCGGTAATTAGGTCCCCCTCGTTTATTTGATTTGAAAAATT
TTTCCAACCCCTCCCCCCCCCCGTTTATTTGGCACCTAAGAGTAGTAACC
TTCAATACATTTTCTTTCTAGAGAAAAATAAAAAATACAAGAACTACAAA
TTCCAGGATATAAAAATTTGATTAAGAAAATGAGTCGAGCTCACATGCTT
TATGATGACACAAAAATGTCAGCATTGCCTGTTAAAATCACCAGATTGCA
AACAGCTTGGGAACCGAACACAATCTTTAAAATGAGGTATCCATTTATTT
TATTCTTTTGAAATCAAATTAATGCTAAACAAAAAACATACATAAATATA
AATAATTCCGGCGATATTGTTAATTTGGTGCTTTCCCAATTTTGCTTGGT
AAATTCCTGAAAATAATGTGGAAAATTTATCAAATATAGACTTTTATATA
CTTTTTAGTTTTTTTTTTATTACTTAGTAATTAAAGAAAAGAGTTTTTGG
TCTGACGGATTGTATGATGTTTATTATGAATATTCTAACTTTGGCAAGAG
AGAAGCGGATCCTCCGATATCATCGGACCGGGCCCCATCTTCCCTAGATA
GAGAAATCACAGCGCTTACCAGACATTGTACTTTGTGCTCGCGACACATC
GGAGCCGTGCTGTATTGACGATGATACTCGCACAGTACGGGAGAAACTTG
CGTTCTCGTAGATACTGAACATATCAGTACCATCACCACACCGCATTCAA
TGTTCGGCATATCTCCCCATACTCTTGTATCAAAGTTATGGTACCCTATT
CCCTTCACATGGTATGGGTTGACCCGGGCCAAGGTACATTCACTTGCCAA
GTGAATCGTAGCACCAAGTGGGAATCGAACCCTGACCTCCAGCACGGAAG
TCAAGAACGATGACCACTACACTACTGTGCCTTAAAAATAAAAACACAAT
TTCCTTCTTTCCTCTTTTCAGTGGTACAGGATACATTATTGAAGCCAATA
TTTTAGGAAAATCTAAACACCAAATCGTGGAAAGCAGTAAAAAGGTGAGT
AAGTCTAGTTTGTCTGCGATCCAAAAGCTCCTCTTTCAATAGCTATCTAC
CCGAAGGGGCAGGGGGGATTGGTACTAAAATCCAAGACACATATATGAGT
ACTAAAAGGTTTTTTGACATACCCCGACCTAATTTTTGAAAAAGGAATTT
TAGTACACAATGTACCCTCTTCAATTTTATTTAATTGCTGAGCTTCAAGC
AGAGAGACATCGAGTACAATTTTTTTATTTTATACTAAGTACGAAGTCTT
TGGTATGACCCGACCTGGGATTAAACCCATTACTTTGCGTACCGTAGTCG
AACCATTGAGTTTCAAGCCCGAAGGGCTAGAGGTCAATCTCTAACCTTTC
TCAGGCAAGAAAAATTGAAGCCTTAAAATATGCGCCGTATTTTTGATGAN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNCCAGGCGGGTCGCTCAAGGCCGCGCAACTTTGGTAGGATT
TGTTGGCTTCAAATCCTACCAAAGAGATTGACCTCTAGCCCTTCGGGCTT
GAAACTCAATGAGTCGAACACTCTACCTTTGTAATTTGTTGACTCATAAA
ATGTAAAATGGTAAAGTTTACCTATTTTATCTATTTGGGAACGCTGTCAT
GTGCCGGGGTAGTAACTGAATTTTCTGCGGTCTTTTACTTTAAAAAACTC
GTGTCTAAGGCGAAAACAACTTTTCCTGAACGTATGACAGGGAAAACTGT
TTTGTCAAGAGAGATTTCAACATTTTAAGAGTTTTCGGTACTTAGTTGGA
AACTTTTAGAAGACCATTATTCAATTTTATCAAAACAAAAATATTAAAAT
CCCAATTTGTAAATTTGAGGTTTTCGACCTACCTGGAGGTCCTACCTGGA
GGTCCTATAAGTTAACCTGTGTTCGTCCGTTCGTCTATTACCAACTTTTC
TCGGGATTGAATACATTGGATTGGTACAAAGGTGCAAAGACGTAGAATTA
CAGTGTGCTAAAAATGTTGGGCCCTAAAAAGGGGTTTTTCCAATTCCTTA
GTTACCGAGGGGGGGGGGAGCACTTCATCAAGATTAGAACAGGGACGTGC
CGCTGGTCAGGGTCCCTTTTTAGGCTCTGAAGATATCTGGTGACAGGTTC
CAAAATTTACTAATTTTTAAGTTGTGTTTCTTACAGGGTCGGCTTTTGGT
AATTTTGGTCACTTTTCAGGGTCGAAACTTTTCGATTTTTCTTTCTGACA
GAGTCACAAATTTACCAAATATTCGTATCTGACAGGGTCCGTTTTTCAAC
CTCCAGCGGCACGTCCCCGTCGACCGTCAAGGTCAGTGCCCCCCTGGGCC
TTAGTTGACATCTAACTTTAATTTGGTACTAAAAAAGGTACCAAAAAAGC
CTCGTGTCGAGTCAAAAATTTTATAATGAAATTATAAAAATGTAACGAAT
TTTTTTTTTTTTTTTCAGTTTCATTACATTTGCTTGCACATCTCCATACT
AAAATCTTTTAAACGAAAATTTGACTCGAATGGCGAAGAAATTGAGCCAG
ACCTTGGTGACAAAAAGAAGGTTAATACTGGATATTTAATGTCCTCTTAT
AGTAAGTGATATTAAAACAGGCGTTTGTCCCACAGATATCTTATATAAAA
CACTAGATGGAACTATCCCGTCCCTAGCTGAAGCAAAATAATTCGCAATT
TCATAATTCGGTACCGGCAATTTGATCTATCAAGCCTATCTTTCGCCTCG
TCGCTTCGCGTCATTAAGGTTTTTTTGCTTGGTTGAATAAATTACCGGTA
CCGAACTGTGACCTAGTGTGACCTACTTTCAGCAAAGATGGCGACCATAG
CTTTATCTAGTGTTTTATAAAGATGTCTATGGTTTGTCCCTTAATGTATT
AATACTTAAGTTGAAATTCTTTGGCCTTTTTGCTCATTCAGACAAATTGT
TAAACTGATATTTCAAAGCTTTCGATAACTTAACAATTTGTGTGCTGTGG
CACAAGCTCTTTCCAAGAAAAGGAAAGGTCGGTTGAAGGTTGAAGGTTTC
TTTTTCTGCTTTCTGATAATTTTTGTTAGGGGAAGGAGTATGTAGTCTCC
AAAGGGGATTACTAACTTTTTACCCGCGACCTTAATTTTAATAAATTTCG
TTGATTTCCTTTTGAAATAATTTTCTTGATTTGTCTGAATTCTTTCGACT
GTAATAAAAAACAACGTTAAAATTGTTGGAATTGAAATTGTTACAGATAC
TGGATTAATATTAATAACTTCTTTCAATTTTACAGAGGATGTTTCAAAAG
AAGGTGAGGATGTTATAAAACCAGCGGAGATGAAGAAACTGTTATATACT
TCAAAAGACTTGGAAAACATTCTTGATGGCAAGTTACAGGCCTATAATCA
CGCGAACTACGTTTCAGCCATCTGGTGCGAAGAAAAAAGTTTAGAAGGGG
TCGAATTACCAAATGGCTCGAAAGTCAGATTAAGAACGAAAGGAAACGGC
TGTTATTTAGGTGAGTAATGCGTTATTTCTTGTTACTCACGCGAACCGAA
CGTTCCTTTTTTGGTAGGTTGGTCTGTTAGCGCAAAAAAATAATTAAGAT
GGTGATAAAAATATAACTTTTAAAAGCGCCTTTTTAAATAACTTGGGCGT
TGATCATCTATTATTTATACAAAGAATCTCGTATAATATCATTTTGTAAC
TAAAAATTTACACGTTTTCTTTTATAAGAACATCCAAAATTTTTGAAGCC
TACGGATGTTCTTAACTTTTTGAGTTTCAAGCCTAAAAATTTTCTTAACA
CGTTCTTATTTTTCCCACTTTTTATGTATTTTTGTCCATTTTCCTAAAGA
AATTAGCTGTTTCCGAGTCCGCGAAGCCTTAAAATGTTCTTAACTTGTTC
TTAACATTTTGGCCATCGAACGCAAGGCTTCTTATATAGTTTGTTCTTAT
TAAAAAAAAACGTTTACCCTTTAAGAATCAATCATATGCTTGGATGAAGA
ATTAACGACTAAACAGAATTTCACAACACACGATTCAGTGGGTGGCTCAT
GGACTGACAAAGTGTTGAATACCAAAGATACCAAGGGTGCGCAATCACAT
TTAAGTCAAGAGAGTGAGGCCGTTGATGATGACGAATGGGTAAGTGTGTT
TTATTTACCTTAAAGGAAAAACATTTATTTTGGGGAACATAGTCTAGCAA
GCTAGACGCCTAATTCCTACATAGTAGAAATAAAGCAAAAAGTAACGGGA
GTCAGTGAACAAATTTTAGTTTATACAAACTAAATTCTGTAACAATAATC
GTATAATCATATAACGCATATACTACTGTATTTTATAAACGACTCCAGTC
TACGGACGGCTTGAAAATTAGCTTTGGCGGGAATTTAATTTGGTGGACAA
AGGATATTTTTTGCCCAAGAACACTATTTAATATGAAAACCTGTTTTAAG
ACATGAAATAGCACACAATACGGAGAATGAGTATAATAATTTAAATTTGG
CGGACATTTGATTTTGCAGATGGCGGGAAAAAATTAGATTTGGCAGGAAC
TTGATGCCAAATTAAGTTTCTGCAAAAATGTTTTCCTTTAAAAGGTATTT
TATCATGATCTGAAGTTGATCGAGATTATTATTGCAATTGACCCTCCCTA
ATTCGATCTTCAAGGGACCAAAAAGAATTTTCTTCGAATTAGAGACAGAT
TCGAATAACAGAGAGTAATTTATACCAATCCCCAGCTGGGGTAGCATTTT
TTTTAATTCGAATAACATGAAGATTCGAATTAGAGAGAGTTGACTGTACT
TACGAGCAACAAATTTTCATTATTCTAGGACTATAAATCTTCACCGTATC
CACTCTTGCTAGATCTGTTCTACTCCCGCATAAAATTTTTCTAGCAAACC
ATGGCAAACATTAGTTTCATCAAAGCAGTTGCCTAAAACAACGTTTCCAC
CAAGCTCAAAAGCAAAGAAGCTTGCCTAAAATCAGAACATGAAAACAAAC
TCGTATAGAATTTTTAACTTCATGTCGAGTTCTAATTAAAACTTAAATGC
AAAAAGAATTCCCAAAGCATTGTCATGTTGTTACAAGACTGTAGAGGAAT
TAAGAAATTCAACAAACAAAGTTCTGCAAGAGGACTGCATTTTCTTTCAA
TTATTATATATCTTAAAATGGTAGGACAACTTTACACTGATAAACTCGAC
ATTTAAACTAATCCTGAAATAGTAATTAGTGATAGTTATGAAATATTTTC
GTCTTGTCCTGGTACGGAATGGATAAGTACTGCTATTGCTGGTGTCCCTG
GCGGTGGCTCACTGCTTCTCTTATTGCTATTTCCATCGCCAATTGCATCA
CCATCATTTACGGTATTTCTTCTTGAAATTCCTTTTTGATTGTAGTACAA
ATATATAATAGCTTTTATACTTATGGTTAACACGTAGACACGGCTGAAAT
ACATCAGTGTGTTAATAGTTGATATTGGTAAGTCAAATCTGTCAACTATA
GTATACAAAGTCATTTTCAGTAACATCGGTACTGAAGTTAGTACAGTCAA
AATTAATGTGATTTTCTGAAGTTTTTTAACTTGTAGCATAGTTTGTGTTG
AGGAAGTTGATTCTACATTTTCATCTGTCGTGTTTTGCTGGGAATTGCTG
ACTTTATAGCTTTTGTAAGCATAAACCAAGGCAAATATACTCAACGAAAA
GGTGTAGAGAAGACCTACTGTAAGAGATAGCCGAGAATTTAAAAGCACTG
TTATCAGTACCTCTGTGAAAGTGAATAGGGTTAGCACCATGAAGAAAGCA
ATTGTGCTTCGTATCATTTTTTTCTTATCTTGTGTTGTCTGGATAGTCCT
GATGCTCCTTAATTTCATCAGGTTATGTCTCACGATAACGATAAGTGCAG
AGATGCTAACTTTAGTTGTCGTGCTATGCCAGCAATAGTTCATTTTCAAT
AGTGAGCACCTGTATTGATTGTCTCTCATTGTATTATAGAAGATAGACGA
ATTGAATATATAATTTATTAAAATACCACAGTTTGATAGAAAGAAAAGGA
GGAAAAATTTGGCTTGGAATGTTTGGATTTTCTTTTGTGCCACCATTATG
GATACAGTTAATGTTAAAACGAACAACGATATTATATAATATGTCAGTAA
AACATTGTTGTTGTCCCATTCTTGAAATTTCAAGAAGCAAAGAGGTTCTT
TCGTACTGTTTGTTGTATTTACGGTGGTCATGGTGACTCTGGTTGACTGA
CCTTCTCTTCTCACCGATCTATTTCTTATCTTTGAAACCTCGACTTTATC
TATCTGTAATTTGTACTGAAATGTCAAAAGTGTTAGTTAAGATTTGAATT
TCCAACCCCACAAACGGGACCAGGTTGAGTTTACCAGTAGGAGAATGACG
TCATACATAATGATATCATTAGAATATCAACGAAACGAATTTCATCTGAC
GTCAATTCCTCAAGTTAAACTCGAATCCAGTTTCCTAACGTGTTAAGGAT
TGATCATATCGTTGATAGGGTTGATAGGATTCATTGGAGAAATGGGATTT
TCCAGAAAAAAATTTGAATATTACAAGTTACCCCCGGACATTGTGAATTT
TGACAACCCCCCCCCCCCCCGAACAAGCGTCAGTTGACCCCGTGTGGACA
TTAGAAATAACCCCCAGACAGAGCAAGTTTACCCCCCGGACAGGTCAAAT
TTTGTAGATTTTTCACTACCCCCCCCTCCCGGACATTTTCTGGAAGAGCC
CAAAATTCGACTACCCCTTATCATAAACTAGTCCCAATTTGAAATGAGGA
GCATTTGCATCGTCCATGATAAATACAGCATCAAAAATCTTCAAAACGCT
GTGAAAGTATATCAATGTATTTTACTGATAATGTATATCAATTTGTTACT
GATGATATATTTTTATCAAGCATTTTTTTTTCCGTTCCCCATTTAACTTT
ACGGGGGTATCGGTATCCGCTTGTTTATTCTTTTCAGGCTCTTGTTTTTC
ATTCACCACTTCTCGGGGCTTTCACCTGCTTTTTCCCCCTCTCTCTCTCT
TTCTTTAAGCTTTTTTCACATGCACGTTAAATCTTACTCAAGACGTTACG
GAAAATCGTTTGTAAGGCCGTCTTTTGGGAATTTCCCCGACTTTACGTAG
AGTTTTTATTGATTAAGAGGGTCTTACGTGACTTTTTCTTCCGTTCAAAA
CTTTTTGAACGTAAGAAAACTCTACTTAAGGCCTTAAAACACTACGTAAG
CTTAGGGAAATTCTCCATTCTCTAAGGTCTTAAGTAAAATTTTACTTGCA
TGTGAAAAAAGCTTTATGCACAGATTAGAACACTTAAAATGGATGTTTAA
GCAAAAAAGTGTTACAAAATACAGAGTGGTAACTTATTTGCAAATTTAGT
CTCTCACAGGTTCAATCCGGTCCGCATATACCCTCCATTTTCCAACTCTA
GTAGCCCCGGATCTCTTGTAAAAATATATCAATTCAAAAGTGCAAAAATA
GAGTGGTATCTTTCTGACAAATTTAGAAATATAACTATTGAATGATAAAT
ACGTTCAGAGGGTCGTCAGATTTTACGAGATCGCAGTTTCCAGCCCAAAA
AGAGATGATACTAAATTTGAATTTTTAATGTCATTATCCCAGTATACTCT
CACGCGGACTCAACACTAAAGAAACGTTTCAGGTGAAAATGATTGACCGA
TTAAAGTTTTTCACCCGGTGCGGGGGCTCGCGGGCGTTCTCGGCTTCGTT
GAATCTCTTCTTTGGCGGATATAGTATATTTTTTATATAAAATTATCTGG
ATAACTATAATCTTTATTGTCACTGTTCTTCAGAATGCTATATTTTGAGG
GTAAAGAGAGAGTCCTTTAATCTCTTTTCTTTTCTTCTTCAGGATGATTA
ACGGATGTCGCAATCATGTCCGATTCGGTAAGATAATAATTTGATAGAAA
TACTCTAGTTGGCGCACAACGCTGTCTAGCGTCATTTGAACATTGTTTTA
ACGTTCAGATAACATCATTTGAACATCGTTTTACCGTTCAGAAAACGTCA
TTTGAACATTGTTTTAACGTTCAGAAAACATCATTTGAACATTGTTTTAA
CGTTCAGGAAACGTCACATTTGAACATTGTCTTAGCGTTCAGATAACATC
ATTTGAACATTGTTTTAGCGTTCAGGCAACATCATTTGAACATCGTTTAG
CGTTCAGAAAACATCACATTTGAACATTGTTTTAACGTTCAGGAAACGTC
ATTTGAACATTGTTTTAGCGTTCAGAAAACCTCATTTGAACATCGTTTTA
GCGTTCAGGCAACATCATTTGAACATCGTTTAGCGTTCAGAAAACGTCAC
ATTTGAACATTGTTTTAACGTTCAGGAAACGTCATTTGAACATTGTTTTA
GCGTTAAGGCAACATCATTTGAACATCGTTTAGCGTTCAGAAAACGTCAC
ATTTGAACATTGTGTTAACGTTCAGGAAACGTCATTTGAACATTGTTTTA
ACGTTCAGATAACATCATTTGAACATCGTTTTAACGTTCAGGAAACGTCA
TTTGAACATTGTCTTAACGTTCAGATAATATCATTTGAACATGGTTTTAG
CGTTCAGAAAACGTCATTTGAACATTGTCTTAGCGTTAAGGCAACATAAT
TTAAACGTTGTTTTTATTTTCAATTTAGACGTTAGTGGATAGCTCACCGA
TCAACTGAATACTGCTTTCAAACATTTAAGCTGACTGGCGGACAACTGAC
TTGACATACTGTAAACTTACACTGTTTGACTTTGGGACAGACTGACTACA
CTACGCACTGACATTCTTCGGTTATAACAAAACTTGATTACTGTTCAAAC
ATTCTCTATCTACAATTTATTATCCGACGCGCGTAAATAGCGGCATTTAA
TTAACTTCTTTTCTTTCCAATATTTTCGAATATATAGCTTCCGTAAATTA
AAAAAATTGGAATTATATTTGAAAACGAATAATATATAATTATTAGCAAT
AATATTTTAGCAATGAACTGCTAATAAACCATTTATTTGGACGCAGTCTC
ATCCGACATGAAAGATATTGGATTCAACTTTGTCTAATAATTGCTGGACA
TAAGCAGAATAGAATTTCTAAATCATAAAATCCTCTGCTAAAACTCGTTG
TCTTACTAGATTGAAACCCCGTACATTAAAAATCCTTTATTCGTTCAAAA
GACATCTGATTCCCCACGCCCGCGCAAAACGCCGGATTGAAAGTAAAATC
TATCGCTAGATTTCAAAATATGCAGTCCTCAAAAACTTAGGAACCGCTAG
ATACTACAATCCCTCGTCGTGATTGGGGGCGCGTTCTAGGCGCGTTCTGG
ATGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011973XLOC_011973Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021386-exon-sc0000385-1575043694:476378..476599TCONS_00021386-exon-sc0000385-1575043694:476378..476599Clytia hemisphaericaexon
TCONS_00021386-exon-sc0000385-1575043694:475633..475789TCONS_00021386-exon-sc0000385-1575043694:475633..475789Clytia hemisphaericaexon
TCONS_00021386-exon-sc0000385-1575043694:472264..475105TCONS_00021386-exon-sc0000385-1575043694:472264..475105Clytia hemisphaericaexon
TCONS_00021386-exon-sc0000385-1575043694:471506..471578TCONS_00021386-exon-sc0000385-1575043694:471506..471578Clytia hemisphaericaexon
TCONS_00021386-exon-sc0000385-1575043694:469749..469881TCONS_00021386-exon-sc0000385-1575043694:469749..469881Clytia hemisphaericaexon
TCONS_00021386-exon-sc0000385-1575043694:468840..469064TCONS_00021386-exon-sc0000385-1575043694:468840..469064Clytia hemisphaericaexon
TCONS_00021386-exon-sc0000385-1575043694:468211..468374TCONS_00021386-exon-sc0000385-1575043694:468211..468374Clytia hemisphaericaexon
TCONS_00021386-exon-sc0000385-1575043694:464423..464457TCONS_00021386-exon-sc0000385-1575043694:464423..464457Clytia hemisphaericaexon
TCONS_00021386-exon-sc0000385-1575043694:462995..463671TCONS_00021386-exon-sc0000385-1575043694:462995..463671Clytia hemisphaericaexon
TCONS_00021386-exon-sc0000385-1510915933:476378..476599TCONS_00021386-exon-sc0000385-1510915933:476378..476599Clytia hemisphaericaexon
TCONS_00021386-exon-sc0000385-1510915933:475633..475789TCONS_00021386-exon-sc0000385-1510915933:475633..475789Clytia hemisphaericaexon
TCONS_00021386-exon-sc0000385-1510915933:472264..475105TCONS_00021386-exon-sc0000385-1510915933:472264..475105Clytia hemisphaericaexon
TCONS_00021386-exon-sc0000385-1510915933:471506..471578TCONS_00021386-exon-sc0000385-1510915933:471506..471578Clytia hemisphaericaexon
TCONS_00021386-exon-sc0000385-1510915933:469749..469881TCONS_00021386-exon-sc0000385-1510915933:469749..469881Clytia hemisphaericaexon
TCONS_00021386-exon-sc0000385-1510915933:468840..469064TCONS_00021386-exon-sc0000385-1510915933:468840..469064Clytia hemisphaericaexon
TCONS_00021386-exon-sc0000385-1510915933:468211..468374TCONS_00021386-exon-sc0000385-1510915933:468211..468374Clytia hemisphaericaexon
TCONS_00021386-exon-sc0000385-1510915933:464423..464457TCONS_00021386-exon-sc0000385-1510915933:464423..464457Clytia hemisphaericaexon
TCONS_00021386-exon-sc0000385-1510915933:462995..463671TCONS_00021386-exon-sc0000385-1510915933:462995..463671Clytia hemisphaericaexon
TCONS_00021386-exon-sc0000385-1491911889:476378..476599TCONS_00021386-exon-sc0000385-1491911889:476378..476599Clytia hemisphaericaexon
TCONS_00021386-exon-sc0000385-1491911889:475633..475789TCONS_00021386-exon-sc0000385-1491911889:475633..475789Clytia hemisphaericaexon
TCONS_00021386-exon-sc0000385-1491911889:472264..475105TCONS_00021386-exon-sc0000385-1491911889:472264..475105Clytia hemisphaericaexon
TCONS_00021386-exon-sc0000385-1491911889:471506..471578TCONS_00021386-exon-sc0000385-1491911889:471506..471578Clytia hemisphaericaexon
TCONS_00021386-exon-sc0000385-1491911889:469749..469881TCONS_00021386-exon-sc0000385-1491911889:469749..469881Clytia hemisphaericaexon
TCONS_00021386-exon-sc0000385-1491911889:468840..469064TCONS_00021386-exon-sc0000385-1491911889:468840..469064Clytia hemisphaericaexon
TCONS_00021386-exon-sc0000385-1491911889:468211..468374TCONS_00021386-exon-sc0000385-1491911889:468211..468374Clytia hemisphaericaexon
TCONS_00021386-exon-sc0000385-1491911889:464423..464457TCONS_00021386-exon-sc0000385-1491911889:464423..464457Clytia hemisphaericaexon
TCONS_00021386-exon-sc0000385-1491911889:462995..463671TCONS_00021386-exon-sc0000385-1491911889:462995..463671Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000385supercontigsc0000385:462995..476599 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
18.517	20.0076	15.0505	12.7157	10.3942	7.70526	14.6363	14.459	12.8818	13.9887	9.87427	10.8061	7.90165	9.11784	11.9952	13.4785	18.0019	17.5819	4.99682	5.26721	13.1241	12.9042	13.8475	10.9346	9.68148	8.63911	9.4917	7.56936	9.14749	9.1222
Blast
[Close]
BLAST of TCONS_00021386 vs. Swiss-Prot (Human)
Match: ARPIN (Arpin OS=Homo sapiens GN=ARPIN PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 6.600e-38
Identity = 83/237 (35.02%), Postives = 129/237 (54.43%), Query Frame = 1 
Query: 3115 MSRAHMLYDDTKMSALPVKITRLQTAWEPNTIFKMSGTGYIIEANILGKSKHQIVES-SKKFHYICLHISILKSFKRKFDSNGEEIEPDLGDKKKVNTGYLMSSYKDVSKEGEDVIKPAEMKKLLYTSKDLENILDGKLQAYNHANYVSAIWCEEKSLEGVELPNGSKVRLRTKGNGCYLESIICLDEELTTKQNFTTHDSVGGSWTDKVLNTKDTKGAQSHLSQESEAVDDDEWDD 3822
            MSR   +Y D  +    V+  RL  AW+P       G G ++E  ++  S+H I+++  +K  Y  L+I      +RKFD+ G EIEP+    +KVNTG+LMSSYK  +K   D + P  +K L+   + L       L      ++  A W  E  +E +EL  G+ VRL+T+G+G +L+S+  L+    TK NFT     G SWTD ++  K +KGA + + ++ +  +D+EWDD
Sbjct:    1 MSR---IYHDGALRNKAVQSVRLPGAWDPAA--HQGGNGVLLEGELIDVSRHSILDTHGRKERYYVLYIRPSHIHRRKFDAKGNEIEPNFSATRKVNTGFLMSSYKVEAKGDTDRLTPEALKGLVNKPELL------ALTESLTPDHTVAFWMPESEMEVMELELGAGVRLKTRGDGPFLDSLAKLEAGTVTKCNFTGDGKTGASWTDNIMAQKCSKGAAAEIREQGDGAEDEEWDD 226
The following BLAST results are available for this feature:
BLAST of TCONS_00021386 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARPIN6.600e-3835.02Arpin OS=Homo sapiens GN=ARPIN PE=1 SV=1[more]
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