TCONS_00021557 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021557
Unique NameTCONS_00021557
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3524

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021557 ID=TCONS_00021557|Name=TCONS_00021557|organism=Clytia hemisphaerica|type=transcript|length=3524bp
agaaaaaaaattaaaaatggcaCCCCGTAAAAGACCCAAAACAAGACTGG
AAAATAGAGCGAAAAAATGGACTCAGAGGACTTTGAAAAAGAGACGTGAA
GATACTACTAAACAATATACAAAAATCAAGAGGAAAATAGCTCCAATGAA
AGATGAATTTGTTAAAATGAACTTATTGAATGATATACAGAAAAATGTAG
TCGTGAGTACCAAAACAGAATCAAGCTATACCTCACAGTCAATATTTAGG
AGGGTGACAAGTGGTTTGATGTACCCAATTACCTTTTTGGTCAATCTGTC
GATTTCAAAGGTCAACAACGCTTCACAATATTTGACGAGACCTTTCAGGC
GAACGCAAGATCGACTTTCACTATACGAAGAACGAATATCACATCTGGAA
AAGGAGGTTGCCCTGTTAAAAGGCTCACAAGAGAAGGTTCAAAATATACT
TCTCAACATACCTCCACAATCAGCAAACACAGCACCAACGATCAATAATC
TGATCCCACCACCACCACCTTCCGCCCCACAAATGATGGCTCCTCCTCCT
CCGCCACCGCCCCCTCCGCCGCCACCACCACCTGCAATGAGTATTCCTTC
AAAAATTGTTGTGACTCGTTCAGTTAAAAAGATCGAAAATCCAAAGAAAA
AGGAAATAGCAGACAACCCACAGATCACAAAAGAACTTTTAAGTACCGTC
ACCCTAAAGAAAGTGACCAAGGTCTTGACAGAATCAAACAAGGAGAATCT
CCCTTCGAGTGGAGGAGGACCCATGATCTCACTTTCTCAACTTAAAAAAG
TGAAGTTGAAACGAACTACCGTTTCACCGAAGCGGTTGACTCCAAGGCGA
CGGGATGGCCAAGGATCATCTGCTATCAAACACAGCGGTGGTCGGAGATC
TCATGAAAAGAAAAGAACACCGGAGAATCCGTTCAAAAGTCGTTTACGGA
AGCGAAACGTCATCCGAAGCCCTGGAGGAACACCACTGGTGAAAAACAAT
TACGAGATGAGCATGGGAGAAGGATTGACCCCCTTGCTGAGCAAtgcatt
gaaaaagaaattccacAATGCAAAACCTGCACTAACACCGGAACACGAGC
TATCAAAAGAAGGATCACCAAATGTCAGCTTTCCCTTTGAAAGTTCTCCG
CAAATTTTCGTATCCTCGCCTGCAGTATGATGAAAAGATAGTTGGTAAGA
ATGATGTGATGTTGAGTGTGGAGGGTTCTGTCCGAAAGTATTTTAATGTT
TGCGAAGGTCCTTTTAAAGACCTTTTCTTTGGTTTGGAATGAAGTTTTTA
GACATGCGCACAGACACTGTATTTATTTCGCATAGTTGCTAGAACAGGCT
AGAACACCATTTTAAGAgcgatttttttttaactttgaagAATCGTGGAA
TACACTCTGTATCGGATAATGTCCTTGAATGACCCGGTGAGAATTTTTAG
CCAATGTCTTCTTGGGGGAAAAAAGGAGGTAAAAACCTTTCACATTTTGT
ATCAAATCGGTTACAGCCTATTAGTCGGAGATTCGCCCAATGATTTTATT
GCTTCGAGTAGCGATGCATGAAAATTCGACGTTGTTCACGTGTAAGAAGT
TTGTTGCTCAGGACGATTTTTCCAATAGGGTTTTGTCTCTGGTCTTAGAC
ACAGGTGTGAAACTAATAAGTAAGCAGCGATTTTTATAAAATCCAATACA
CCTTTGAAAAGCTATCGGAGACAGTCTCTTTTTAGTGTCTTTTCTAACAA
AGTCACATGacgattgggctcttccagaaaaaatccgttcatgggggtcg
gaggatgaattgtccaggggtattgaaaaaaataccaaaaaattgctatg
tccagggggtaaattccaatgtcaaggggtaattttttgtgtccacggag
ttgatttgatgtttgtccaggggtataacccgtgtccagggggttattCA
TGAAAAacataatatatcctccacccccatgaacGTATTTATTCTCTAGA
AGAGCCCATTCTAGAGTGAGACATATGTTggtgaattttgaatttgaggT
TTGTCAACTTTCTGAATGTGGTGCTTATCGAAAtgtatattttatattct
aATCTTTTATTATCATTAAAAGTAAAGCACAATCTATCTATACCTTTTAT
TATTATAAATGTAAATAGTCAATAAATCTATGTATTTCACTGAAAAGACA
ATTTTATCTTTGTTACCATTTAGGAAAATTCAAATTCGTGTTATTTGTTT
AATGACCCAGCAAGACTCTCTTGTCTCTGATGAACGTCCGGCTTCTTATT
TTGCCTAAATCTGTTAACAATTTTCTACCCGGGACAAAGTCCAGTAGAGT
TTCATCAAAAATAGGGTCAACctagaaagaaaatttataaaagaTATTCT
TATTCCAAACAATTCCCTTCCGCTTATCCTAGACCCCTATTAGAGTAGTA
GACTCTATTAGAGAACCGAGAGAATACAAATTCAAAGTATATCGAACGTC
TTTTATTCGAGTTGGCTCAAATAGACCAATTGGCTTTatcttgaaaattt
acagatttTATGAGACCTTTCGATGATTGATATCATAAATTAAAAATTCA
GTAAAAAATTGATACTAAATATTAATATACATGATactgtaaagttttta
agacaTTTCTTGTAAAACTTCGTTCAGTTTATCAAGGGCATAATGAACGT
CACTTTCGCCCACATCATGGTGTAAAACAAACCTTAACTTGGTGTCCGAA
AATGCAATGGAAAGTATTCCTTTCTCTATCAAACGGTCTTGAATTTCGTA
TGATTTTCCTGGTGGCGTTTCAGTAAAAACTAAATTCGTTTTGACTTTCG
ATAGATCAACTTTAATCAAATCATGAAAGTTCAACTCTTGTATTCCTTCT
GCTAACATTCTCGCATTTGAATGGTCCCGTTGTATCCATATGTGACCATG
TTCGAGGGCGTATAAACCAGCCGCCGCCAAAAATCCCGCCTGTCTGATTC
CACCGCCCAAAGATTTTCGAATGCGAATAGCCTTATTCACTAGCTCTTCA
CTGCCACCTATTACTGAGCCAATAGGGCACCCAAGTCCTTTTGATAAACA
CATAGAAACCGAGTTAGCCTCTACCAAAATATCAGATAAAGGTTGGTTAG
TTGCAACAGCTGCATTAAACACTCTAGCGCCATCAATATGTAATTGCAAC
CCATTTTCACGTGCTAATTGGCCAACTTGTTTCAAATAGTCATTGGTAAG
AGGGATCCCACCACAATTCATGTGAGTGTTCTCCAAACAAATTAGCTTAG
TTTCTGATTGGTGAAAATCGGATGCATCTCTTATGTTTTGTTTGATTGAT
TCTAGTTTGATCGTCCCATCTGGTTCGTTCGATAGAACACGTGCGCCGAT
TCCAGCCAATCGCATGAAATGTCCTTGCTCATACAAATACACGTGTTGGT
TCGATCCAATGATGAGCTCTTCGCCACGCCCATAACAATGAGACATTAAA
CATAAAAGATTGCCCATGGTACCT
Run BLAST on NCBI

protein sequence of TCONS_00021557-protein

>TCONS_00021557-protein ID=TCONS_00021557-protein|Name=TCONS_00021557-protein|organism=Clytia hemisphaerica|type=polypeptide|length=392bp
EKKLKMAPRKRPKTRLENRAKKWTQRTLKKRREDTTKQYTKIKRKIAPMK
DEFVKMNLLNDIQKNVVVSTKTESSYTSQSIFRRVTSGLMYPITFLVNLS
ISKVNNASQYLTRPFRRTQDRLSLYEERISHLEKEVALLKGSQEKVQNIL
LNIPPQSANTAPTINNLIPPPPPSAPQMMAPPPPPPPPPPPPPPAMSIPS
KIVVTRSVKKIENPKKKEIADNPQITKELLSTVTLKKVTKVLTESNKENL
PSSGGGPMISLSQLKKVKLKRTTVSPKRLTPRRRDGQGSSAIKHSGGRRS
HEKKRTPENPFKSRLRKRNVIRSPGGTPLVKNNYEMSMGEGLTPLLSNAL
KKKFHNAKPALTPEHELSKEGSPNVSFPFESSPQIFVSSPAV
Run BLAST on NCBI

transcript from alignment at sc0000389:168105..174217-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021557 ID=TCONS_00021557|Name=TCONS_00021557|organism=Clytia hemisphaerica|type=transcript|length=6113bp|location=Sequence derived from alignment at sc0000389:168105..174217- (Clytia hemisphaerica)
AGAAAAAAAATTAAAAATGGCACCCCGTAAAAGACCCAAAACAAGACTGG AAAATAGAGCGAAAAAATGGACTCAGAGGACTTTGAAAAAGAGACGTGAA GATACTACTAAACAATATACAAAAATCAAGAGGAAAATAGCTCCAATGAA AGATGAATTTGTTAAAATGAACTTATTGAATGATATACAGAAAAATGTAG TCGTGAGTACCAAAACAGAATCAAGCTATACCTCACAGTCAATATTTAGG AGGGTGACAAGTGGTTTGATGTACCCAATTACCTTTTTGGTCAATCTGTC GATTTCAAAGGTAAAAATATTGATCTTTGTTGCGGTTTGGTTGTATTTTT TTATCTAGAATGTGCAAGCAATGTTGACTACATTCTGTGCAGCGGAGCTA AATTAATTGCCCCATGTATAAAATTACGTTAGTACGATGTACCTTTCCCT GCGCTACTATTTCAGTTATTGCTTATGATTTTTAAACTAGATGATCAATT TTAAAATTTTGCGCCCTTGACTTTGGCACTTCACAATACATAATGCAAAG AATTTTGATATGAAGAAATGTTGCAGGTTAAGTAGCATTTCGTCCTCATA GAGACTCGTCTACACTGCGCACTGCAGTCTACGTACTTGAATACAATTAA TGTTTTCTTTCACCAGGTCAACAACGCTTCACAATATTTGACGAGACCTT TCAGGCGAACGCAAGATCGACTTTCACTATACGAAGAACGAATATCACAT CTGGAAAAGGAGGTTGCCCTGTTAAAAGGCTCACAAGAGAAGGTAAAACT TTTTGCAATTTAGCAAAGAATAAGCAATCTTAATAAAACGTTAAATAGAC AAACCTTCCTTGAATACTCAATACTTCATCGTCTCATATTATTGTTATGT TCAAGGTTCAAAATATACTTCTCAACATACCTCCACAATCAGCAAACACA GCACCAACGATCAATAATCTGATCCCACCACCACCACCTTCCGCCCCACA AATGATGGCTCCTCCTCCTCCGCCACCGCCCCCTCCGCCGCCACCACCAC CTGCAATGAGTATTCCTTCAAAAATTGTTGTGACTCGTTCAGTTAAAAAG ATCGAAAATCCAAAGGTAAGAGTTTATTGCTATTATCACATTATACGATT CTGTGAGAAATGTTCAAAGTTAATAAATGGAGTGTTAGAACTAATAAGAA TGATTTTATTTTGGAGATTACGGCAATGTTCGTGATCATGATTAAATGTA GTTTATCGCTTTCTTTGTTATCTTAAAAACATTGTTTTAGCTTTTTTTCT TTTCTTAACAAGTATTGCTTAGTCTATTTTTATTCGCAGCTCTTGATTTT CTTTTTTCTTTCTGCAGAAAAAGGAAATAGCAGACAACCCACAGATCACA AAAGAACTTTTAAGTACCGTCACCCTAAAGAAAGTGACCAAGGTCTTGAC AGAATCAAACAAGGAGAATCTCCCTTCGAGTGGAGGAGGACCCATGATCT CACTTTCTCAACTTAAAAAAGTGAAGTTGAAACGAACTACCGTTTCACCG AAGCGGTTGACTCCAAGGCGACGGGATGGCCAAGGATCATCTGCTATCAA ACACAGCGGTGGTCGGAGATCTCATGAAAAGAAAAGGTTATTACTAAATC AGTAAAGAGGCTTGCAACCACTACTATTCTTTATTTGGACTAAAATTTAC TATCAGCAATCTTGATCTGAACCGAAAAGTCGTACCCTTCCAGGGATAGT CGGTACTAAGATCTCAACCATCATGTTTTTTAAGTGACGCGGTGGTAAAT AAATTAACTTAAAAATAGATTTTAGTACCCACCCCCCCCCATCCTGACTC CACTGGTCGTTATTACTGAGGTTAAGCATACCAGGATAATCACGACGACG GACGGAAATCGGCTTTTTGAGCCTTCAATGTTTCTTACATGTTTCTAAAC TTTGTCAAGCTTAAAGGACGCATGTTGATAATACAATAGTCTAATAGACT AATCTACGGTACTTTCCTATCTTCTATATTGATTTTCTGACTTTCTCAAG TGTTTCTAACTGTTATAAGTATTTTTTTGGAACTTTGTCTTCATTGGAAG ATTCTTAATTAAAAAATGTTATTTTCTCATTCTCAGCCTCAGCATGTTTT TTAGATGTTTCTTAGTTTTTAGGCATTCTGAGCCTCATGTTTCTTAAAAG TGTGTTACTTAAAAAAAACGTGTATCACATCATATTGTTACTCCTTAGTT TATGTTGTCTCTTTCTGTACTTCTTTAGATTGGTAATGTAAGGATTTTTC ATGTTTTCCTTTTAATAGAACACCGGAGAATCCGTTCAAAAGTCGTTTAC GGAAGCGAAACGTCATCCGAAGCCCTGGAGGAACACCACTGGTGAAAAAC AATTACGAGATGAGCATGGGAGAAGGATTGACCCCCTTGCTGAGCAATGC ATTGAAAAAGAAATTCCACGTAAGAAAATTTTCGATAAACCCAGAAAGAG ATAGAAAGGTAAACTCCCATGATAACTATTGTGATTACAAAGGCTAGCCA AATTGTTCAAGTGTTTAAAAAAAAGTCTATTCGTTTTCTACTTTATTTTC AATCAACAACTTGTTTAAAACCCAGAATAAATCTACGAGGGACCTCATCT TTTGCAGAGGTCTTACATTTCGATTGGATTCATGATGTATGACTACAGTG ATACTAAAAGAGTCTTTCTGTTTCTATTTTTCATAGAATGCAAAACCTGC ACTAACACCGGAACACGAGCTATCAAAAGAAGGATCACCAAATGTCAGCT TTCCCTTTGTAGGTCACATTTCTTTGGTTTTTTTCCCTTGAATTTTGTAG TAATCTTCTTCGTTTATTTTGATTTCCGGATATTTCTTAGGCTCTGGATA TTTAGCGGCTCCTTATTTTGTACACACCCTTAAAAGTCTTGTATAAGGAA TGGAAGATTTGTCCTTCTAATTTAAAAGATACCGGACACTTTTTTCCAAA CCTTCTTACACCTAGAACACAACGCCCTTCCAATGTCTACATACACACGT CCTTTTAACGTTAATGGGCCACTCACATATCGATTCTTCCCACGACTAAA CGTCAAAATGACGCTTAGTCCAAGTCCTCGTCTCGTCTTGATGCCAATTT TTTGTGTAAAACCCATGAAAAATAGACGACAAAACTATGCATAGCGAGGG TAGTTAACAAAATAAAAAAATATCAGTAAGGCTTGGGAACACGAGAAGTT TTTTCGCGTTGGTGTATGCAACATGCTCCATCCCATCAACCTGAAACGCT TTCTCGTGTCTCCACCCCATTTTTCTTTTAATAACATTTTATTTGTGCTG TTCTCACTTTTGTCCCCAATCAGCGTGTCTTTTGGGTATTTTCCTCACTT TTTGTCCCATGAAACAAGAAAAGAAACCATGAGACACGCACTTTTTTCTT GTGTTGGTGTGATAGAGCATGTTGTACTGCACTAACGCAACTTCTCGTGT CCCCAAGCCTTTAGAATAATTATAATTTAATCAGCCGCGAAAATCGATGT TTTGATTGGTTTTCTTAGCGTCAATGCCTCTGACCCCCACCCAAACCCCA ACGCGTCAATTTGACGTTAGTCTTGGGAAATATCAATATGTGAGTGGCCC CTGGATGTTCCAACACTGCATTATTGACTTACATTCATAAGACACTTCCT TTACCCTTCTTATCCTTTCTCTTTCAGGAAAGTTCTCCGCAAATTTTCGT ATCCTCGCCTGCAGTATGATGAAAAGATAGTTGGTAAGAATGATGTGATG TTGAGTGTGGAGGGTTCTGTCCGAAAGTATTTTAATGTTTGCGAAGGTCC TTTTAAAGACCTTTTCTTTGGTTTGGAATGAAGTTTTTAGACATGCGCAC AGACACTGTATTTATTTCGCATAGTTGCTAGAACAGGCTAGAACACCATT TTAAGAGCGATTTTTTTTTAACTTTGAAGAATCGTGGAATACACTCTGTA TCGGATAATGTCCTTGAATGACCCGGTGAGAATTTTTAGCCAATGTCTTC TTGGGGGAAAAAAGGAGGTAAAAACCTTTCACATTTTGTATCAAATCGGT TACAGCCTATTAGTCGGAGATTCGCCCAATGATTTTATTGCTTCGAGTAG CGATGCATGAAAATTCGACGTTGTTCACGTGTAAGAAGTTTGTTGCTCAG GACGATTTTTCCAATAGGGTTTTGTCTCTGGTCTTAGACACAGGTGTGAA ACTAATAAGTAAGCAGCGATTTTTATAAAATCCAATACACCTTTGAAAAG CTATCGGAGACAGTCTCTTTTTAGTGTCTTTTCTAACAAAGTCACATGAC GATTGGGCTCTTCCAGAAAAAATCCGTTCATGGGGGTCGGAGGATGAATT GTCCAGGGGTATTGAAAAAAATACCAAAAAATTGCTATGTCCAGGGGGTA AATTCCAATGTCAAGGGGTAATTTTTTGTGTCCACGGAGTTGATTTGATG TTTGTCCAGGGGTATAACCCGTGTCCAGGGGGTTATTCATGAAAAACATA ATATATCCTCCACCCCCATGAACGTATTTATTCTCTAGAAGAGCCCATTC TAGAGTGAGACATATGTTGGTGAATTTTGAATTTGAGGTTTGTCAACTTT CTGAATGTGGTGCTTATCGAAATGTATATTTTATATTCTAATCTTTTATT ATCATTAAAAGTAAAGCACAATCTATCTATACCTTTTATTATTATAAATG TAAATAGTCAATAAATCTATGTATTTCACTGAAAAGACAATTTTATCTTT GTTACCATTTAGGAAAATTCAAATTCGTGTTATTTGTTTAATGACCCAGC AAGACTCTCTTGTCTCTGATGAACGTCCGGCTTCTTATTTTGCCTAAATC TGTTAACAATTTTCTACCCGGGACAAAGTCCAGTAGAGTTTCATCAAAAA TAGGGTCAACCTAGAAAGAAAATTTATAAAAGATATTCTTATTCCAAACA ATTCCCTTCCGCTTATCCTAGACCCCTATTAGAGTAGTAGACTCTATTAG AGAACCGAGAGAATACAAATTCAAAGTATATCGAACGTCTTTTATTCGAG TTGGCTCAAATAGACCAATTGGCTTTATCTTGAAAATTTACAGATTTTAT GAGACCTTTCGATGATTGATATCATAAATTAAAAATTCAGTAAAAAATTG ATACTAAATATTAATATACATGATACTGTAAAGTTTTTAAGACATTTCTT GTAAAACTTCGTTCAGTTTATCAAGGGCATAATGAACGTCACTTTCGCCC ACATCATGGTGTAAAACAAACCTTAACTTGGTGTCCGAAAATGCAATGGA AAGTATTCCTTTCTCTATCAAACGGTCTTGAATTTCGTATGATTTTCCTG GTGGCGTTTCAGTAAAAACTAAATTCGTTTTGACTTTCGATAGATCAACT TTAATCAAATCATGAAAGTTCAACTCTTGTATTCCTTCTGCTAACATTCT CGCATTTGAATGGTCCCGTTGTATCCATATGTGACCATGTTCGAGGGCGT ATAAACCAGCCGCCGCCAAAAATCCCGCCTGTCTGATTCCACCGCCCAAA GATTTTCGAATGCGAATAGCCTTATTCACTAGCTCTTCACTGCCACCTAT TACTGAGCCAATAGGGCACCCAAGTCCTTTTGATAAACACATAGAAACCG AGTTAGCCTCTACCAAAATATCAGATAAAGGTTGGTTAGTTGCAACAGCT GCATTAAACACTCTAGCGCCATCAATATGTAATTGCAACCCATTTTCACG TGCTAATTGGCCAACTTGTTTCAAATAGTCATTGGTAAGAGGGATCCCAC CACAATTCATGTGAGTGTTCTCCAAACAAATTAGCTTAGTTTCTGATTGG TGAAAATCGGATGCATCTCTTATGTTTTGTTTGATTGATTCTAGTTTGAT CGTCCCATCTGGTTCGTTCGATAGAACACGTGCGCCGATTCCAGCCAATC GCATGAAATGTCCTTGCTCATACAAATACACGTGTTGGTTCGATCCAATG ATGAGCTCTTCGCCACGCCCATAACAATGAGACATTAAACATAAAAGATT GCCCATGGTACCT

Coding sequence (CDS) from alignment at sc0000389:168105..174217-

>TCONS_00021557 ID=TCONS_00021557|Name=TCONS_00021557|organism=Clytia hemisphaerica|type=CDS|length=8253bp|location=Sequence derived from alignment at sc0000389:168105..174217- (Clytia hemisphaerica)
GAAAGTTCTCCGCAAATTTTCGTATCCTCGCCTGCAGTATGAAATGCAAA
ACCTGCACTAACACCGGAACACGAGCTATCAAAAGAAGGATCACCAAATG
TCAGCTTTCCCTTTAACACCGGAGAATCCGTTCAAAAGTCGTTTACGGAA
GCGAAACGTCATCCGAAGCCCTGGAGGAACACCACTGGTGAAAAACAATT
ACGAGATGAGCATGGGAGAAGGATTGACCCCCTTGCTGAGCAATGCATTG
AAAAAGAAATTCCACAAAAAGGAAATAGCAGACAACCCACAGATCACAAA
AGAACTTTTAAGTACCGTCACCCTAAAGAAAGTGACCAAGGTCTTGACAG
AATCAAACAAGGAGAATCTCCCTTCGAGTGGAGGAGGACCCATGATCTCA
CTTTCTCAACTTAAAAAAGTGAAGTTGAAACGAACTACCGTTTCACCGAA
GCGGTTGACTCCAAGGCGACGGGATGGCCAAGGATCATCTGCTATCAAAC
ACAGCGGTGGTCGGAGATCTCATGAAAAGAAAAGGTTCAAAATATACTTC
TCAACATACCTCCACAATCAGCAAACACAGCACCAACGATCAATAATCTG
ATCCCACCACCACCACCTTCCGCCCCACAAATGATGGCTCCTCCTCCTCC
GCCACCGCCCCCTCCGCCGCCACCACCACCTGCAATGAGTATTCCTTCAA
AAATTGTTGTGACTCGTTCAGTTAAAAAGATCGAAAATCCAAAGGTCAAC
AACGCTTCACAATATTTGACGAGACCTTTCAGGCGAACGCAAGATCGACT
TTCACTATACGAAGAACGAATATCACATCTGGAAAAGGAGGTTGCCCTGT
TAAAAGGCTCACAAGAGAAGGAAAAAAAATTAAAAATGGCACCCCGTAAA
AGACCCAAAACAAGACTGGAAAATAGAGCGAAAAAATGGACTCAGAGGAC
TTTGAAAAAGAGACGTGAAGATACTACTAAACAATATACAAAAATCAAGA
GGAAAATAGCTCCAATGAAAGATGAATTTGTTAAAATGAACTTATTGAAT
GATATACAGAAAAATGTAGTCGTGAGTACCAAAACAGAATCAAGCTATAC
CTCACAGTCAATATTTAGGAGGGTGACAAGTGGTTTGATGTACCCAATTA
CCTTTTTGGTCAATCTGTCGATTTCAAAGGAAAGTTCTCCGCAAATTTTC
GTATCCTCGCCTGCAGTATGAAATGCAAAACCTGCACTAACACCGGAACA
CGAGCTATCAAAAGAAGGATCACCAAATGTCAGCTTTCCCTTTAACACCG
GAGAATCCGTTCAAAAGTCGTTTACGGAAGCGAAACGTCATCCGAAGCCC
TGGAGGAACACCACTGGTGAAAAACAATTACGAGATGAGCATGGGAGAAG
GATTGACCCCCTTGCTGAGCAATGCATTGAAAAAGAAATTCCACAAAAAG
GAAATAGCAGACAACCCACAGATCACAAAAGAACTTTTAAGTACCGTCAC
CCTAAAGAAAGTGACCAAGGTCTTGACAGAATCAAACAAGGAGAATCTCC
CTTCGAGTGGAGGAGGACCCATGATCTCACTTTCTCAACTTAAAAAAGTG
AAGTTGAAACGAACTACCGTTTCACCGAAGCGGTTGACTCCAAGGCGACG
GGATGGCCAAGGATCATCTGCTATCAAACACAGCGGTGGTCGGAGATCTC
ATGAAAAGAAAAGGTTCAAAATATACTTCTCAACATACCTCCACAATCAG
CAAACACAGCACCAACGATCAATAATCTGATCCCACCACCACCACCTTCC
GCCCCACAAATGATGGCTCCTCCTCCTCCGCCACCGCCCCCTCCGCCGCC
ACCACCACCTGCAATGAGTATTCCTTCAAAAATTGTTGTGACTCGTTCAG
TTAAAAAGATCGAAAATCCAAAGGTCAACAACGCTTCACAATATTTGACG
AGACCTTTCAGGCGAACGCAAGATCGACTTTCACTATACGAAGAACGAAT
ATCACATCTGGAAAAGGAGGTTGCCCTGTTAAAAGGCTCACAAGAGAAGG
AAAAAAAATTAAAAATGGCACCCCGTAAAAGACCCAAAACAAGACTGGAA
AATAGAGCGAAAAAATGGACTCAGAGGACTTTGAAAAAGAGACGTGAAGA
TACTACTAAACAATATACAAAAATCAAGAGGAAAATAGCTCCAATGAAAG
ATGAATTTGTTAAAATGAACTTATTGAATGATATACAGAAAAATGTAGTC
GTGAGTACCAAAACAGAATCAAGCTATACCTCACAGTCAATATTTAGGAG
GGTGACAAGTGGTTTGATGTACCCAATTACCTTTTTGGTCAATCTGTCGA
TTTCAAAGGAAAGTTCTCCGCAAATTTTCGTATCCTCGCCTGCAGTATGA
AATGCAAAACCTGCACTAACACCGGAACACGAGCTATCAAAAGAAGGATC
ACCAAATGTCAGCTTTCCCTTTAACACCGGAGAATCCGTTCAAAAGTCGT
TTACGGAAGCGAAACGTCATCCGAAGCCCTGGAGGAACACCACTGGTGAA
AAACAATTACGAGATGAGCATGGGAGAAGGATTGACCCCCTTGCTGAGCA
ATGCATTGAAAAAGAAATTCCACAAAAAGGAAATAGCAGACAACCCACAG
ATCACAAAAGAACTTTTAAGTACCGTCACCCTAAAGAAAGTGACCAAGGT
CTTGACAGAATCAAACAAGGAGAATCTCCCTTCGAGTGGAGGAGGACCCA
TGATCTCACTTTCTCAACTTAAAAAAGTGAAGTTGAAACGAACTACCGTT
TCACCGAAGCGGTTGACTCCAAGGCGACGGGATGGCCAAGGATCATCTGC
TATCAAACACAGCGGTGGTCGGAGATCTCATGAAAAGAAAAGGTTCAAAA
TATACTTCTCAACATACCTCCACAATCAGCAAACACAGCACCAACGATCA
ATAATCTGATCCCACCACCACCACCTTCCGCCCCACAAATGATGGCTCCT
CCTCCTCCGCCACCGCCCCCTCCGCCGCCACCACCACCTGCAATGAGTAT
TCCTTCAAAAATTGTTGTGACTCGTTCAGTTAAAAAGATCGAAAATCCAA
AGGTCAACAACGCTTCACAATATTTGACGAGACCTTTCAGGCGAACGCAA
GATCGACTTTCACTATACGAAGAACGAATATCACATCTGGAAAAGGAGGT
TGCCCTGTTAAAAGGCTCACAAGAGAAGGAAAAAAAATTAAAAATGGCAC
CCCGTAAAAGACCCAAAACAAGACTGGAAAATAGAGCGAAAAAATGGACT
CAGAGGACTTTGAAAAAGAGACGTGAAGATACTACTAAACAATATACAAA
AATCAAGAGGAAAATAGCTCCAATGAAAGATGAATTTGTTAAAATGAACT
TATTGAATGATATACAGAAAAATGTAGTCGTGAGTACCAAAACAGAATCA
AGCTATACCTCACAGTCAATATTTAGGAGGGTGACAAGTGGTTTGATGTA
CCCAATTACCTTTTTGGTCAATCTGTCGATTTCAAAGGAAAGTTCTCCGC
AAATTTTCGTATCCTCGCCTGCAGTATGAAATGCAAAACCTGCACTAACA
CCGGAACACGAGCTATCAAAAGAAGGATCACCAAATGTCAGCTTTCCCTT
TAACACCGGAGAATCCGTTCAAAAGTCGTTTACGGAAGCGAAACGTCATC
CGAAGCCCTGGAGGAACACCACTGGTGAAAAACAATTACGAGATGAGCAT
GGGAGAAGGATTGACCCCCTTGCTGAGCAATGCATTGAAAAAGAAATTCC
ACAAAAAGGAAATAGCAGACAACCCACAGATCACAAAAGAACTTTTAAGT
ACCGTCACCCTAAAGAAAGTGACCAAGGTCTTGACAGAATCAAACAAGGA
GAATCTCCCTTCGAGTGGAGGAGGACCCATGATCTCACTTTCTCAACTTA
AAAAAGTGAAGTTGAAACGAACTACCGTTTCACCGAAGCGGTTGACTCCA
AGGCGACGGGATGGCCAAGGATCATCTGCTATCAAACACAGCGGTGGTCG
GAGATCTCATGAAAAGAAAAGGTTCAAAATATACTTCTCAACATACCTCC
ACAATCAGCAAACACAGCACCAACGATCAATAATCTGATCCCACCACCAC
CACCTTCCGCCCCACAAATGATGGCTCCTCCTCCTCCGCCACCGCCCCCT
CCGCCGCCACCACCACCTGCAATGAGTATTCCTTCAAAAATTGTTGTGAC
TCGTTCAGTTAAAAAGATCGAAAATCCAAAGGTCAACAACGCTTCACAAT
ATTTGACGAGACCTTTCAGGCGAACGCAAGATCGACTTTCACTATACGAA
GAACGAATATCACATCTGGAAAAGGAGGTTGCCCTGTTAAAAGGCTCACA
AGAGAAGGAAAAAAAATTAAAAATGGCACCCCGTAAAAGACCCAAAACAA
GACTGGAAAATAGAGCGAAAAAATGGACTCAGAGGACTTTGAAAAAGAGA
CGTGAAGATACTACTAAACAATATACAAAAATCAAGAGGAAAATAGCTCC
AATGAAAGATGAATTTGTTAAAATGAACTTATTGAATGATATACAGAAAA
ATGTAGTCGTGAGTACCAAAACAGAATCAAGCTATACCTCACAGTCAATA
TTTAGGAGGGTGACAAGTGGTTTGATGTACCCAATTACCTTTTTGGTCAA
TCTGTCGATTTCAAAGGAAAGTTCTCCGCAAATTTTCGTATCCTCGCCTG
CAGTATGAAATGCAAAACCTGCACTAACACCGGAACACGAGCTATCAAAA
GAAGGATCACCAAATGTCAGCTTTCCCTTTAACACCGGAGAATCCGTTCA
AAAGTCGTTTACGGAAGCGAAACGTCATCCGAAGCCCTGGAGGAACACCA
CTGGTGAAAAACAATTACGAGATGAGCATGGGAGAAGGATTGACCCCCTT
GCTGAGCAATGCATTGAAAAAGAAATTCCACAAAAAGGAAATAGCAGACA
ACCCACAGATCACAAAAGAACTTTTAAGTACCGTCACCCTAAAGAAAGTG
ACCAAGGTCTTGACAGAATCAAACAAGGAGAATCTCCCTTCGAGTGGAGG
AGGACCCATGATCTCACTTTCTCAACTTAAAAAAGTGAAGTTGAAACGAA
CTACCGTTTCACCGAAGCGGTTGACTCCAAGGCGACGGGATGGCCAAGGA
TCATCTGCTATCAAACACAGCGGTGGTCGGAGATCTCATGAAAAGAAAAG
GTTCAAAATATACTTCTCAACATACCTCCACAATCAGCAAACACAGCACC
AACGATCAATAATCTGATCCCACCACCACCACCTTCCGCCCCACAAATGA
TGGCTCCTCCTCCTCCGCCACCGCCCCCTCCGCCGCCACCACCACCTGCA
ATGAGTATTCCTTCAAAAATTGTTGTGACTCGTTCAGTTAAAAAGATCGA
AAATCCAAAGGTCAACAACGCTTCACAATATTTGACGAGACCTTTCAGGC
GAACGCAAGATCGACTTTCACTATACGAAGAACGAATATCACATCTGGAA
AAGGAGGTTGCCCTGTTAAAAGGCTCACAAGAGAAGGAAAAAAAATTAAA
AATGGCACCCCGTAAAAGACCCAAAACAAGACTGGAAAATAGAGCGAAAA
AATGGACTCAGAGGACTTTGAAAAAGAGACGTGAAGATACTACTAAACAA
TATACAAAAATCAAGAGGAAAATAGCTCCAATGAAAGATGAATTTGTTAA
AATGAACTTATTGAATGATATACAGAAAAATGTAGTCGTGAGTACCAAAA
CAGAATCAAGCTATACCTCACAGTCAATATTTAGGAGGGTGACAAGTGGT
TTGATGTACCCAATTACCTTTTTGGTCAATCTGTCGATTTCAAAGGAAAG
TTCTCCGCAAATTTTCGTATCCTCGCCTGCAGTATGAAATGCAAAACCTG
CACTAACACCGGAACACGAGCTATCAAAAGAAGGATCACCAAATGTCAGC
TTTCCCTTTAACACCGGAGAATCCGTTCAAAAGTCGTTTACGGAAGCGAA
ACGTCATCCGAAGCCCTGGAGGAACACCACTGGTGAAAAACAATTACGAG
ATGAGCATGGGAGAAGGATTGACCCCCTTGCTGAGCAATGCATTGAAAAA
GAAATTCCACAAAAAGGAAATAGCAGACAACCCACAGATCACAAAAGAAC
TTTTAAGTACCGTCACCCTAAAGAAAGTGACCAAGGTCTTGACAGAATCA
AACAAGGAGAATCTCCCTTCGAGTGGAGGAGGACCCATGATCTCACTTTC
TCAACTTAAAAAAGTGAAGTTGAAACGAACTACCGTTTCACCGAAGCGGT
TGACTCCAAGGCGACGGGATGGCCAAGGATCATCTGCTATCAAACACAGC
GGTGGTCGGAGATCTCATGAAAAGAAAAGGTTCAAAATATACTTCTCAAC
ATACCTCCACAATCAGCAAACACAGCACCAACGATCAATAATCTGATCCC
ACCACCACCACCTTCCGCCCCACAAATGATGGCTCCTCCTCCTCCGCCAC
CGCCCCCTCCGCCGCCACCACCACCTGCAATGAGTATTCCTTCAAAAATT
GTTGTGACTCGTTCAGTTAAAAAGATCGAAAATCCAAAGGTCAACAACGC
TTCACAATATTTGACGAGACCTTTCAGGCGAACGCAAGATCGACTTTCAC
TATACGAAGAACGAATATCACATCTGGAAAAGGAGGTTGCCCTGTTAAAA
GGCTCACAAGAGAAGGAAAAAAAATTAAAAATGGCACCCCGTAAAAGACC
CAAAACAAGACTGGAAAATAGAGCGAAAAAATGGACTCAGAGGACTTTGA
AAAAGAGACGTGAAGATACTACTAAACAATATACAAAAATCAAGAGGAAA
ATAGCTCCAATGAAAGATGAATTTGTTAAAATGAACTTATTGAATGATAT
ACAGAAAAATGTAGTCGTGAGTACCAAAACAGAATCAAGCTATACCTCAC
AGTCAATATTTAGGAGGGTGACAAGTGGTTTGATGTACCCAATTACCTTT
TTGGTCAATCTGTCGATTTCAAAGGAAAGTTCTCCGCAAATTTTCGTATC
CTCGCCTGCAGTATGAAATGCAAAACCTGCACTAACACCGGAACACGAGC
TATCAAAAGAAGGATCACCAAATGTCAGCTTTCCCTTTAACACCGGAGAA
TCCGTTCAAAAGTCGTTTACGGAAGCGAAACGTCATCCGAAGCCCTGGAG
GAACACCACTGGTGAAAAACAATTACGAGATGAGCATGGGAGAAGGATTG
ACCCCCTTGCTGAGCAATGCATTGAAAAAGAAATTCCACAAAAAGGAAAT
AGCAGACAACCCACAGATCACAAAAGAACTTTTAAGTACCGTCACCCTAA
AGAAAGTGACCAAGGTCTTGACAGAATCAAACAAGGAGAATCTCCCTTCG
AGTGGAGGAGGACCCATGATCTCACTTTCTCAACTTAAAAAAGTGAAGTT
GAAACGAACTACCGTTTCACCGAAGCGGTTGACTCCAAGGCGACGGGATG
GCCAAGGATCATCTGCTATCAAACACAGCGGTGGTCGGAGATCTCATGAA
AAGAAAAGGTTCAAAATATACTTCTCAACATACCTCCACAATCAGCAAAC
ACAGCACCAACGATCAATAATCTGATCCCACCACCACCACCTTCCGCCCC
ACAAATGATGGCTCCTCCTCCTCCGCCACCGCCCCCTCCGCCGCCACCAC
CACCTGCAATGAGTATTCCTTCAAAAATTGTTGTGACTCGTTCAGTTAAA
AAGATCGAAAATCCAAAGGTCAACAACGCTTCACAATATTTGACGAGACC
TTTCAGGCGAACGCAAGATCGACTTTCACTATACGAAGAACGAATATCAC
ATCTGGAAAAGGAGGTTGCCCTGTTAAAAGGCTCACAAGAGAAGGAAAAA
AAATTAAAAATGGCACCCCGTAAAAGACCCAAAACAAGACTGGAAAATAG
AGCGAAAAAATGGACTCAGAGGACTTTGAAAAAGAGACGTGAAGATACTA
CTAAACAATATACAAAAATCAAGAGGAAAATAGCTCCAATGAAAGATGAA
TTTGTTAAAATGAACTTATTGAATGATATACAGAAAAATGTAGTCGTGAG
TACCAAAACAGAATCAAGCTATACCTCACAGTCAATATTTAGGAGGGTGA
CAAGTGGTTTGATGTACCCAATTACCTTTTTGGTCAATCTGTCGATTTCA
AAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012087XLOC_012087Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021557-proteinTCONS_00021557-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021557-exon-sc0000389-1575043694:173908..174217TCONS_00021557-exon-sc0000389-1575043694:173908..174217Clytia hemisphaericaexon
TCONS_00021557-exon-sc0000389-1575043694:173426..173551TCONS_00021557-exon-sc0000389-1575043694:173426..173551Clytia hemisphaericaexon
TCONS_00021557-exon-sc0000389-1575043694:173103..173312TCONS_00021557-exon-sc0000389-1575043694:173103..173312Clytia hemisphaericaexon
TCONS_00021557-exon-sc0000389-1575043694:172582..172850TCONS_00021557-exon-sc0000389-1575043694:172582..172850Clytia hemisphaericaexon
TCONS_00021557-exon-sc0000389-1575043694:171749..171899TCONS_00021557-exon-sc0000389-1575043694:171749..171899Clytia hemisphaericaexon
TCONS_00021557-exon-sc0000389-1575043694:171410..171481TCONS_00021557-exon-sc0000389-1575043694:171410..171481Clytia hemisphaericaexon
TCONS_00021557-exon-sc0000389-1575043694:168105..170490TCONS_00021557-exon-sc0000389-1575043694:168105..170490Clytia hemisphaericaexon
TCONS_00021557-exon-sc0000389-1510915933:173908..174217TCONS_00021557-exon-sc0000389-1510915933:173908..174217Clytia hemisphaericaexon
TCONS_00021557-exon-sc0000389-1510915933:173426..173551TCONS_00021557-exon-sc0000389-1510915933:173426..173551Clytia hemisphaericaexon
TCONS_00021557-exon-sc0000389-1510915933:173103..173312TCONS_00021557-exon-sc0000389-1510915933:173103..173312Clytia hemisphaericaexon
TCONS_00021557-exon-sc0000389-1510915933:172582..172850TCONS_00021557-exon-sc0000389-1510915933:172582..172850Clytia hemisphaericaexon
TCONS_00021557-exon-sc0000389-1510915933:171749..171899TCONS_00021557-exon-sc0000389-1510915933:171749..171899Clytia hemisphaericaexon
TCONS_00021557-exon-sc0000389-1510915933:171410..171481TCONS_00021557-exon-sc0000389-1510915933:171410..171481Clytia hemisphaericaexon
TCONS_00021557-exon-sc0000389-1510915933:168105..170490TCONS_00021557-exon-sc0000389-1510915933:168105..170490Clytia hemisphaericaexon
TCONS_00021557-exon-sc0000389-1491911889:173908..174217TCONS_00021557-exon-sc0000389-1491911889:173908..174217Clytia hemisphaericaexon
TCONS_00021557-exon-sc0000389-1491911889:173426..173551TCONS_00021557-exon-sc0000389-1491911889:173426..173551Clytia hemisphaericaexon
TCONS_00021557-exon-sc0000389-1491911889:173103..173312TCONS_00021557-exon-sc0000389-1491911889:173103..173312Clytia hemisphaericaexon
TCONS_00021557-exon-sc0000389-1491911889:172582..172850TCONS_00021557-exon-sc0000389-1491911889:172582..172850Clytia hemisphaericaexon
TCONS_00021557-exon-sc0000389-1491911889:171749..171899TCONS_00021557-exon-sc0000389-1491911889:171749..171899Clytia hemisphaericaexon
TCONS_00021557-exon-sc0000389-1491911889:171410..171481TCONS_00021557-exon-sc0000389-1491911889:171410..171481Clytia hemisphaericaexon
TCONS_00021557-exon-sc0000389-1491911889:168105..170490TCONS_00021557-exon-sc0000389-1491911889:168105..170490Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000389supercontigsc0000389:168105..174217 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.21448 1.96133 1.54666 1.72323 20.3721 16.0885 16.438 17.3225 5.77397 7.25283 4.75564 4.59428 3.5039 2.61581 5.23059 6.19811 6.69246 4.58113 0.904373 1.14012 2.53125 2.80162 4.58278 4.32584 20.9935 17.1431 0.799579 0.551814 4.54962 4.64789
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021557 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top