TCONS_00021668 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021668
Unique NameTCONS_00021668
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length319

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021668 ID=TCONS_00021668|Name=TCONS_00021668|organism=Clytia hemisphaerica|type=transcript|length=319bp
CTCAAACCTCCCATGCAAAAGAATAACGAATGAATAATCTAAATAATAGA
AACATCATAGTCCCACTTGATGACAAGGTACAAACAGACCATAaacattt
gaaataaaatttcttacCTCTTAATTGAATTCAACACTCAAGTTGCAACA
TTTATAACATTTTATCCAGTCAGAAAGAATATTTATCCATAATTCTAAAG
TCAATGAAACATAAACGCCCCCTTTCGTAATCTCCCTTTCAGACGAAAAG
AACGAATATCCAGGTAGTTCAACTCACACTTAAGAAAAATAGGTACAAAC
agacaataaataaaaaaaa
Run BLAST on NCBI

transcript from alignment at sc0000391:207236..207554

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021668 ID=TCONS_00021668|Name=TCONS_00021668|organism=Clytia hemisphaerica|type=transcript|length=319bp|location=Sequence derived from alignment at sc0000391:207236..207554 (Clytia hemisphaerica)
ttttttttatttattgtctGTTTGTACCTATTTTTCTTAAGTGTGAGTTG
AACTACCTGGATATTCGTTCTTTTCGTCTGAAAGGGAGATTACGAAAGGG
GGCGTTTATGTTTCATTGACTTTAGAATTATGGATAAATATTCTTTCTGA
CTGGATAAAATGTTATAAATGTTGCAACTTGAGTGTTGAATTCAATTAAG
AGgtaagaaattttatttcaaatgttTATGGTCTGTTTGTACCTTGTCAT
CAAGTGGGACTATGATGTTTCTATTATTTAGATTATTCATTCGTTATTCT
TTTGCATGGGAGGTTTGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012157XLOC_012157Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021668-exon-sc0000391-1491911889:207236..207554TCONS_00021668-exon-sc0000391-1491911889:207236..207554Clytia hemisphaericaexon
TCONS_00021668-exon-sc0000391-1510915933:207236..207554TCONS_00021668-exon-sc0000391-1510915933:207236..207554Clytia hemisphaericaexon
TCONS_00021668-exon-sc0000391-1575043694:207236..207554TCONS_00021668-exon-sc0000391-1575043694:207236..207554Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000391supercontigsc0000391:207236..207554 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021668 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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