TCONS_00021722 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021722
Unique NameTCONS_00021722
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2240

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021722 ID=TCONS_00021722|Name=TCONS_00021722|organism=Clytia hemisphaerica|type=transcript|length=2240bp
atttcagaCTATAAACTAAAAACGAAAAATTGatattaaaaataattatg
CCAATCGTGTTGACTCAGAAATGGTtgttagatttattgaattcaAAAGC
AACATATCTTCAATATCATGCATTTCAAAAGGGAATCAGGCATAATCACA
AACTGGAAGGTGCCGTGGCAATCGCCCGACTTGGTGGCTCCAAGGAATAC
GTAGAGAAGTATTTTGACGTTATCGATAAACGCTATTTGAAATACACTGG
ATTAGAAGATGATGAAACTCAATTGTTGGAAAGAGATTTTCTCCAGTCGG
ACAAATTGGAAGATTACAGAGGGAAGAATCAAGCATATTACAAAATGTTA
TCCATGTACACTAAACTGTACGAAACCAAGTAtgacaaaaacataaaaaa
aatgatCCAAGgCGTTTGTCCTGATATCTTGGACGGTCCCTTGCACAGTT
CATTTCATGTGGAGCCATTCAATTAGCATACGGTTTAGTGTGTGGTTGTG
ATCAAGCTGTTTTGGAAGGCATCACTTTCATGGATCAACAGTATTCCCCT
GTGTTTCCTAACGATACCAATGATGAAAAGAGGAAAGATTTGACGGGTTT
CGGACACGGCAAGAAAGACATTTTCGAATTGTTGAACGATCTCGCAAGTA
ATACGACATTGAAAGAGAAAATCAAACTGGATCATCAAAAAGGCTTCGAG
TTCAGAAAGCAGAATCACATGTACGGTGCTTACGGCTGGTCCGCATTACA
ATATCATTCTGAATATTTCTTCGAATTGACCAATAGTATTGCGCTGCCCG
AATGGTTTGTCGTGGAGGATAAGGATATGACACagCTATTCCGATTATTT
GGTTGGGTGGTAGACGTTGCCACAAAAATCTACGTCAAAAGCAAAGTGCT
TAACGACTTTTTTCTACTCCATGGGATTACAGGGAGTTGGTCTTACAGTA
AAATTGCAGACTTCGGAATGGATTTCGATGTCGCACTCCTCGCAATACGT
GCAATGCTTTTTGGGTTATTGGTGACATATATTACCCAAGATACACCAGC
ACTCGTTCAAAAACCAGAGGAATATTTTGATAGCCCTCTCACGCAAGATG
TTTGGAATAAATTCTTGGATGATCTGTTGAAGAAGGAAGTTATATATGAA
TTCCACGTTTATAAAGTTATCCAGTGTGTCTATGAACGTTGGATGGAGCA
AAACGGTTCTGGTTCCTCATCTATGGACAAATATTACATGGCTGCTGCTA
AAATTATCCTTAATAACTCATATCCCCCTGGTGGTAACATCCCTATAAAG
CAATCCAACATTTTATCCGAATGATTGTTTTGGTGGCGCTTGTTTCCAAT
CCCTGTCAAGGAGAAGCCATCTTAAAATACAAcataagattccccgttcg
agttcaAATTGGCGAAAGTCAAATGTATTTAGATTgcgttttgagatttt
tggtcgcatttttgacgacagttTGAATAATATACGATTTGGTTTGGGTT
GCATCACTTGTTTTATTGAAAGATGATATTTTAAAACGATTGGTTATGTA
ACAAAATGATGGTTTATTGAAGGCGCTTATCTACAATATTGAAGTTCGTA
TAACTAAAGACCATCGGATGGAAATGAGTCGATCGTGTAATTGTGACTGG
ACTTGTCCCGACGGACGTTTCCTCAACAGACGTTTCCCCGACGAACATTT
CCCCGACGAACATTTCCTCAACAGACGTTTCCCCGACGAACGTTTCCCCG
ACGAACATTTCCCCGACGAACGTTTCCCCGACGAACATTTCCCCGACGAA
CATTTCCCAGACGAACATTTCCCCGACGAGCATTTCCCCGACGGACGTTT
CCCCCGACGGATGTTTCCCCCAAACTGGACTTGACATTTCCCAGACGGGG
TTTCCCACGAACGGACTTTTCCCCGACTATGACCAGACATTTACCCGACT
GATGTTTCCCCGACTTGACATTTCTCTTCTCATAATGCTTTTAAAGGCAA
GTATAATTATTGTAGATTTTCCAGGACTAGACTTTACTAGACAGATATGA
TGATAGGACTAGATAAAtggtttgaaaagtttgattttaaaaaagatttt
aatattAAGCATATACTTTTATGGTTGTTTTATCTTTCTGTAGCAATCAC
TTTTTAGTTTATCATACGTAAATTAATGAAAGCTTTTTGTAAAGGctttg
tttttagaattttgtaaatgaattaaatatttatttaaat
Run BLAST on NCBI

protein sequence of TCONS_00021722-protein

>TCONS_00021722-protein ID=TCONS_00021722-protein|Name=TCONS_00021722-protein|organism=Clytia hemisphaerica|type=polypeptide|length=264bp
MDQQYSPVFPNDTNDEKRKDLTGFGHGKKDIFELLNDLASNTTLKEKIKL
DHQKGFEFRKQNHMYGAYGWSALQYHSEYFFELTNSIALPEWFVVEDKDM
TQLFRLFGWVVDVATKIYVKSKVLNDFFLLHGITGSWSYSKIADFGMDFD
VALLAIRAMLFGLLVTYITQDTPALVQKPEEYFDSPLTQDVWNKFLDDLL
KKEVIYEFHVYKVIQCVYERWMEQNGSGSSSMDKYYMAAAKIILNNSYPP
GGNIPIKQSNILSE
Run BLAST on NCBI

transcript from alignment at sc0000393:42951..50724-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021722 ID=TCONS_00021722|Name=TCONS_00021722|organism=Clytia hemisphaerica|type=transcript|length=7774bp|location=Sequence derived from alignment at sc0000393:42951..50724- (Clytia hemisphaerica)
ATTTCAGACTATAAACTAAAAACGAAAAATTGATATTAAAAATAATTATG
CCAATCGTGTTGACTCAGAAATGGTTGTTAGATTTATTGAATTCAAAAGC
AACATATCTTCAATATCATGCATTTCAAAAGGTATGAAAATATATACCAT
TTTAAATAAATAGGCTTTCATTTCTACTGCAGGATCACACTGTACGCGTT
GAACACCGTTTTACAATAAATTTAACTCCTATTTCTGATCTTAAAATATC
TACAATAATAGCTCCCAAAAAAAATTAAGTATGTACTTTTAATAAACTGT
AACGCTTGAAGCTGTTTGTTTTTTAACTTTAAAAAGCTGGGAAAATTCAA
GATGTAGTTGTTTTTATTTGTAAATTTTAACCTATTGTCAGGCACAATTT
GCATGATTAGAAATTGGCCACCAATTCTAGGGTTGCGTCAATGAAACGGC
ATTCAACCATTGTTAACTTGAACTCATCCCTTTATCATGCAGTTCATAAT
GTGAAAGGGTAGTTCCAATGATGCATTACGTTATGATCAAGGTTGAATTC
TCTTTCTCAATGTACAGGGAATCAGGCATAATCACAAACTGGAAGGTGCC
GTGGCAATCGCCCGACTTGGTGGCTCCAAGGAATACGTAGAGAAGTATTT
TGACGTTATCGATAAACGCTATTTGAAATACACTGGATTAGAAGATGATG
AAACTCAATTGTTGGAAAGAGATTTTCTCCAGGTATATTTACATTCGAAT
AAGCTTTCTCTCTGGTCATAAAACTGACAGTTTGTGTAGTTTAGTGTTAA
TCCACTGAAAAGATATCGCGGAAAATAGACCTTTTGCCAGGTCACGATGT
CATGTTGAATAATAAAAAACTCCAGCATTATAACAATGATAGGAAAGTAA
GTAGCACACACGTGTACTAATTATGCTGCTGTAATTGTTCTGATGCTGGA
GTTTTTGAGGATTCAATTATGAGATTGTGCCTAGCAAAAGCACAAACAGA
ACTGAACTGAAATAAGTTGGAGAAAATTCTGTAGAAAGGTCAGCAAATGA
ATTATTTTGTTGTTAAATGAGAAAGCATAAAACTCTTTGATTTGAACCTT
TTTGATACTTTTCCCTAGTCGGACAAATTGGAAGATTACCGAGGGAAGAA
TCAAGCATATTACAAAATGTTATCCATGTACACTAAACTGTACGAAACCA
AGTATGACAAAAACATAAAAAAAATGATCCAAGGTATGTCTTAAGTTCTA
GGATACATTTGAATATACACTCTATAAAGTCATTTGAGTTTAGGAAATAT
CGAGTTATGGAGTAAGGCCTATAAGGCATTGTTGACTGAAGGGATTATAA
AACTTGTTAGAGTTAAGGAGACATTCTGGTTACAGAGGTTCAGGTTAAAG
AGACTAGNCTAGTCGGACAAATTGGAAGATTACAGAGGGAAGAATCAAGC
ATATTACAAAATGTTATCCATGTACACTAAACTGTACGAAACCAAGTATG
ACAAAAACATAAAAAAAATGATCCAAGGTATGTCTTAAGTTCTAGGATAC
ATTTGAATATACACTCTATAAAGTCATTTGAGTTTAGGAAATATCGAGTT
ATGGAGTAAGGCCTATAAGGCATTGTTGACTGAAGGGATTATAAAACTTG
TTAGAGTTAAGGAGACATTCTGGTTACAGAGGTTCAGGTTAAAGAGACTA
GCTACTTTGGGCTAGAATTTTAAATAGGATCCACTGACAATGATATATGA
CCTTTGTTTTAGAGAAATTGCAATTTTGGCCTTCTGATTTTGCTTTAAAC
CCATTAAAAATAACTTTAACTCCGTAACTTCAAATTTTTAAAATGACTTT
GGAACGAAGCTTTCTCTACCTTTACAACTCAAATTCACATACGCTGTCCG
GATTTCATTCAAAATTTTCAGGCGTTTGTCCTGATATCTTGGACGGTCCC
TTGCACAGTTCATTTCATGTGGAGCCATTCAATTAGCATACGGTTTAGTG
TGTGGTTGTGATCAAGCTGTTTTGGAAGGCATCACTTTCATGGATCAACA
GTATTCCCCTGTGTTTCCTAACGATACCAATGATGAAAAGGTAGGTGATA
GCACTAGATTTGATTACTTGTAATGTAGCTTCGCCTGTGGCCTGACGCAA
ATTTATAAACATTTGAATTGGTTTCCTTTGAGAACAAAATACACGTAGCT
GCTGTAACGGCACAAGAGGTTTCGGTTTGAATTTTATACTAGTGTCAAAA
AACACTACAATTAAATTTTTCATTTCATGACCATGTCCATGTATTGGCAC
ACAACTCTAAAGCTTGAGCCTGATCCTTTTCACCTAAACGTCACTTTCCA
TGTAAAAGTTGAGAGATTTGATTTTTTCCATGTCTAATAAATTTACTCTT
AGGTTCCAAATAAACGCCCCCTCCCCCCGCTTGTTAATTTTTATATTTAC
CTTATTTTGGGTTTTCAGAAGTACAATTTCCAACCCCCCGGCAATTANNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTTAAAAAATTTCGTAAATTTTCCAACCCTCCCCCCTTTTTTATTT
GGAACCTAAGAGTACGTGACAAGATAAAAGGGTAATTTGGACATTCCACT
AAGTAAACATTGATATTGTATGGACATTTGAATCCTTTCGGCGACAATAG
ACGATATCGGCTTAACCGAATTCTCCCCGAATGATTACCCATAATGCATT
GCGCAAAAAAATTCACGGACGATAACCCTAACCCTAACAATGCATCATGG
GTAATCATTCGGGGAGAATTCGGAAAGCCGATATCGTCTATTGACCCACG
AGAACAAGTCCCTTCATTTTTTAACAGAGGAAAGATTTGACGGGTTTCGG
ACACGGCAAGAAAGACATTTTCGAATTGTTGAACGATCTCGCAAGTAATA
CGACATTGAAAGAGAAAATCAAACTGGATCATCAAAAAGGCTTCGAGTTC
AGGTACATCTGTGTTAAATTTGAATCAGTGTTATGTTTTGGACGAAACCT
CTATACTTATTGATTTTCGAATGTCATTCGTTTTTTGCAATCACTCTACA
TTTTTTGCTTTCAAATACTAAGAACAGCGGACTTTTCAAGAGAGAAGACT
GCTGGCTGAATCATTTTATTAAAGAACCACCTTTCCCTCCGACTTTTGTT
TAAGGTTTGTTTATGTTATCTTTCTACCTATCTAACTTTTTCAGAAAGCA
GAATCACATGTACGGTGCTTACGGCTGGTCCGCATTACAATATCATTCTG
AATATTTCTTCGAATTGACCAATAGTATTGCGCTGCCCGAATGGTTTGTC
GTGGAGGATAAGGATATGACACAGGTAAAAAGTTTTGAAAACCGTTTTAA
TCTCTATTCAGATGACATGTATCTTTTATTCAAATTTTAAGGATTTTACA
GAGAAAGAAAGTTTACTAGTTTACTACCGGGTGCTTCAAAAAAAAATGGC
CTACTGTTTATAATGAATTTTGTCATTTTGGGTAAGTCAAAATTTTTAGT
TTTTAACATAGCTTTTGATTGACTGAACCGATTTAAAAGTTTTCTATACC
AAAATTCAATTTAGGCTTTCCTCTATTCTTGATATGCGTAAGTCATTTTT
CTAGCGGAAACACCCTAAAAAATCCGGGCTCACCAGAAACCAGAAACCTT
ACAATATGAATATTTCTGGTGAGCTCTTTATTTTTGCCTCTCAAAATTGA
TCTAGTGATTTACACAGAAATGCTTCGTTTCAGCTATTCCGATTATTTGG
TTGGGTGGTAGACGTTGCCACAAAAATCTACGTCAAAAGCAAAGTGCTTA
ACGACTTTTTTCTACTCCATGGGATTACAGGTTTAATAGATTTTTTCTTT
CTTTTACTGTACTTATTTTAGGTTTTTCCAAAATAATCAATTTATAAAAT
GTCGAAGTGTCATATTTTCTGTCAGGGTTTACCCTGAACACCTAGGAAAT
CCAAGGGGTGAGTGGCATCTCAACGAAAATGACCTACGTTAGATAAACCC
TATCCTGTATTTGGGGAATGTTTTAAGAAGTGGATTTCCATAATTTTAGG
AAAAATCAAAAGAACACTCATCTAAGGAGGTACCTTGGAAGTTAAGAGTA
CAAGGTACCTCCTGTCTTCACATCGCCTAAAGGTATTTGTGTATGTCGTC
GGATTATATGTTACACCAATGGAACCCATATTAATATACTTGTTCTTTGC
TTTAGGGAGTTGGTCTTACAGTAAAATTGCAGACTTCGGAATGGATTTCG
ATGTCGCACTCCTCGCAATACGTGCAATGCTTTTTGGGTTATTGGTGACA
TATATTACCCAAGATACACCAGCACTCGTTCAAAAACCAGAGGAATATTT
TGATAGCCCTCTCACGCAAGATGTTTGGAATAAATTCTTGGATGATCTGT
TGAAGAAGGAAGTTATATATGAATTCCACGTTTATAAAGTATGCTCTTAT
TATTTCCTATGGATCGGATATCTCCTATAAAAAAATCGCCCGGGGTTGTT
ACTTAGGCAAGTGAATGTACAGGTTTGTACAGCCCTTAAAGGTACCTTTT
TGGAACGTTACAGTCCATGTAAAAATAAGAAAATTTGAATGTTTTTGCCC
CAAAAACCATCTCTTTCGTCAAATTAGTCCCGATATGGGTCGTTAGATTC
ACAAAACTTTCCAAACTTTCCTCCTTTTTAGTCCCGCTAAGGGTCCAAGG
CTCGAAAGCCGGGAGGCACCCCCCGTCCCGTCATCCTATAAACCTTGCAT
CCCCCCTCGGGCGAAATTGTGTCCCGTTTGGCATAGACAACATATTTTTT
TGACAGTACTTTTCTACATTCGAATTTTGACATTTGAAAATTGAAATGTG
TAACATAGACTGATGTTTAACCCTATTAGCCCCAGGGGGGGGGGGGGGGA
AAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTAAACG
GCTTGAAACCTTCTGACTTTTAACAAAATCTTATTAAGAGTACTTGTGCA
AAATTTTAGGGTCATAGGTCATCATCAAATTTGGAAAATTTTACTCATCG
TCAGCATAGATTTTAAGGAAAAATCTTTATGGAAATTGCAAAAGCGGCAA
TTATGTTATTAAGCGCAGCCTTTTGTATTCAGAATCTTTAAACAGAATCT
AAATATCTTTATTGATTCGACTGTAATAGACATTTTTTAATTCATATATT
TTGTTTTTTTTCGATAGGTGGACATTTTGTGATGACGTCATCGGTTTTTG
AATGACGTCATCGGTTTTTGAATGACGTCATCGGTTTTTGAATGACGTCA
TCAATTGTTTTTTTCTTCCAGGAAATTTGTGACCATTTCTCTTCTAGATC
GTAAATAATTCGAGGGTGGTAGATTCTACCCCCCCCCACTGCCTGGGGAT
ACAAAAATCAAAAAAGCTTGGGGCTAATTGGGGCTTATGGTATTTTTCCG
TTTGTTTGAATCTCACCAACCAAAGGTTAGGCAAAATTTTAAAAATTCAT
TTCAATGAATCTAAATGAAAGCGCTCTATTTCTCAGGTTATCCAGTGTGT
CTATGAACGTTGGATGGAGCAAAACGGTTCTGGTTCCTCATCTATGGACA
AATATTACATGGCTGCTGCTAAAATTATCCTTAATAACTCATATCCCCCT
GGTGGTAACATCCCTATAAAGCAATCCAACATTTTATCCGAATGATTGTT
TTGGTGGCGGTATGAGAATTTATCTTTTGGTATAATTGAATCTAATGTAA
TGGAGTACAGTAAACTTTCGCTTATTTGAACTTCTGAAGAAATATTCGCG
GAACAAATTTTTGCGGAATTTAATTTCGCAGTTTTTTTTTGACAAATCCG
CGAAATTGAATTCCGTGAAACACAAATAAACAGTCTCAATAGATTCTCAA
GATTTGGAAAATCGCCTCTAAAATTGGTCTTTTTAGGGCAAAAAAGGCGA
TATTTTAAACAAAAAATTCTTCCAACCGCGAAATTAAATTCCCGCGAAAC
TTCCCAATTTTGAGCTGTGAACTACGAAATTAGGTTCCGCGAAAATTTCT
TCCTTTAAGGTACTATTCGAATCTTTCTATCATTTAAGCTTGTTTCCAAT
CCCTGTCAAGGAGAAGCCATCTTAAAATACAACATAAGATTCCCCGTTCG
AGTTCAAATTGGCGAAAGTCAAATGTATTTAGATTGCGTTTTGAGATTTT
TGGTCGCATTTTTGACGACAGTTTGAATAATATACGATTTGGTTTGGGTT
GCATCACTTGTTTTATTGAAAGATGATATTTTAAAACGATTGGTTATGTA
ACAAAATGATGGTTTATTGAAGGCGCTTATCTACAATATTGAAGTTCGTA
TAACTAAAGACCATCGGATGGAAATGAGTCGATCGTGTAATTGTGACTGG
ACTTGTCCCGACGGACGTTTCCTCAACAGACGTTTCCCCGACGAACATTT
CCCCGACGAACATTTCCTCAACAGACGTTTCCCCGACGAACGTTTCCCCG
ACGAACATTTCCCCGACGAACGTTTCCCCGACGAACATTTCCCCGACGAA
CATTTCCCAGACGAACATTTCCCCGACGAGCATTTCCCCGACGGACGTTT
CCCCCGACGGATGTTTCCCCCAAACTGGACTTGACATTTCCCAGACGGGG
TTTCCCACGAACGGACTTTTCCCCGACTATGACCAGACATTTACCCGACT
GATGTTTCCCCGACTTGACATTTCCCAGACGGGGTTTTCCACGAACGGAA
TTTTCCCCGACTATGACCAGATATTTACCCGACTGATGTTTCCCTGACCG
GACATTTCTCTTCTCATAATGCTTTTAAAGGCAAGTATAATTATTGTAGA
TTTTCCAGGACTAGACTTTACTAGACAGATATGATGATAGGACTAGATAA
ATGGTTTGAAAAGTTTGATTTTAAAAAAGATTTTAATATTAAGCATATAC
TTTTATGGTTGTTTTATCTTTCTGTAGCAATCACTTTTTAGTTTATCATA
CGTAAATTAATGAAAGCTTTTTGTAAAGGCTTTGTTTTTAGAATTTTGTA
AATGAATTAAATATTTATTTAAAT

Coding sequence (CDS) from alignment at sc0000393:42951..50724-

>TCONS_00021722 ID=TCONS_00021722|Name=TCONS_00021722|organism=Clytia hemisphaerica|type=CDS|length=4770bp|location=Sequence derived from alignment at sc0000393:42951..50724- (Clytia hemisphaerica)
GTTATCCAGTGTGTCTATGAACGTTGGATGGAGCAAAACGGTTCTGGTTC
CTCATCTATGGACAAATATTACATGGCTGCTGCTAAAATTATCCTTAATA
ACTCATATCCCCCTGGTGGTAACATCCCTATAAAGCAATCCAACATTTTA
TCCGAATGAGGAGTTGGTCTTACAGTAAAATTGCAGACTTCGGAATGGAT
TTCGATGTCGCACTCCTCGCAATACGTGCAATGCTTTTTGGGTTATTGGT
GACATATATTACCCAAGATACACCAGCACTCGTTCAAAAACCAGAGGAAT
ATTTTGATAGCCCTCTCACGCAAGATGTTTGGAATAAATTCTTGGATGAT
CTGTTGAAGAAGGAAGTTATATATGAATTCCACGTTTATAAACTATTCCG
ATTATTTGGTTGGGTGGTAGACGTTGCCACAAAAATCTACGTCAAAAGCA
AAGTGCTTAACGACTTTTTTCTACTCCATGGGATTACAGAAAGCAGAATC
ACATGTACGGTGCTTACGGCTGGTCCGCATTACAATATCATTCTGAATAT
TTCTTCGAATTGACCAATAGTATTGCGCTGCCCGAATGGTTTGTCGTGGA
GGATAAGGATATGACACAGAGGAAAGATTTGACGGGTTTCGGACACGGCA
AGAAAGACATTTTCGAATTGTTGAACGATCTCGCAAGTAATACGACATTG
AAAGAGAAAATCAAACTGGATCATCAAAAAGGCTTCGAGTTCAGATGGAT
CAACAGTATTCCCCTGTGTTTCCTAACGATACCAATGATGAAAAGGTTAT
CCAGTGTGTCTATGAACGTTGGATGGAGCAAAACGGTTCTGGTTCCTCAT
CTATGGACAAATATTACATGGCTGCTGCTAAAATTATCCTTAATAACTCA
TATCCCCCTGGTGGTAACATCCCTATAAAGCAATCCAACATTTTATCCGA
ATGAGGAGTTGGTCTTACAGTAAAATTGCAGACTTCGGAATGGATTTCGA
TGTCGCACTCCTCGCAATACGTGCAATGCTTTTTGGGTTATTGGTGACAT
ATATTACCCAAGATACACCAGCACTCGTTCAAAAACCAGAGGAATATTTT
GATAGCCCTCTCACGCAAGATGTTTGGAATAAATTCTTGGATGATCTGTT
GAAGAAGGAAGTTATATATGAATTCCACGTTTATAAACTATTCCGATTAT
TTGGTTGGGTGGTAGACGTTGCCACAAAAATCTACGTCAAAAGCAAAGTG
CTTAACGACTTTTTTCTACTCCATGGGATTACAGAAAGCAGAATCACATG
TACGGTGCTTACGGCTGGTCCGCATTACAATATCATTCTGAATATTTCTT
CGAATTGACCAATAGTATTGCGCTGCCCGAATGGTTTGTCGTGGAGGATA
AGGATATGACACAGAGGAAAGATTTGACGGGTTTCGGACACGGCAAGAAA
GACATTTTCGAATTGTTGAACGATCTCGCAAGTAATACGACATTGAAAGA
GAAAATCAAACTGGATCATCAAAAAGGCTTCGAGTTCAGATGGATCAACA
GTATTCCCCTGTGTTTCCTAACGATACCAATGATGAAAAGGTTATCCAGT
GTGTCTATGAACGTTGGATGGAGCAAAACGGTTCTGGTTCCTCATCTATG
GACAAATATTACATGGCTGCTGCTAAAATTATCCTTAATAACTCATATCC
CCCTGGTGGTAACATCCCTATAAAGCAATCCAACATTTTATCCGAATGAG
GAGTTGGTCTTACAGTAAAATTGCAGACTTCGGAATGGATTTCGATGTCG
CACTCCTCGCAATACGTGCAATGCTTTTTGGGTTATTGGTGACATATATT
ACCCAAGATACACCAGCACTCGTTCAAAAACCAGAGGAATATTTTGATAG
CCCTCTCACGCAAGATGTTTGGAATAAATTCTTGGATGATCTGTTGAAGA
AGGAAGTTATATATGAATTCCACGTTTATAAACTATTCCGATTATTTGGT
TGGGTGGTAGACGTTGCCACAAAAATCTACGTCAAAAGCAAAGTGCTTAA
CGACTTTTTTCTACTCCATGGGATTACAGAAAGCAGAATCACATGTACGG
TGCTTACGGCTGGTCCGCATTACAATATCATTCTGAATATTTCTTCGAAT
TGACCAATAGTATTGCGCTGCCCGAATGGTTTGTCGTGGAGGATAAGGAT
ATGACACAGAGGAAAGATTTGACGGGTTTCGGACACGGCAAGAAAGACAT
TTTCGAATTGTTGAACGATCTCGCAAGTAATACGACATTGAAAGAGAAAA
TCAAACTGGATCATCAAAAAGGCTTCGAGTTCAGATGGATCAACAGTATT
CCCCTGTGTTTCCTAACGATACCAATGATGAAAAGGTTATCCAGTGTGTC
TATGAACGTTGGATGGAGCAAAACGGTTCTGGTTCCTCATCTATGGACAA
ATATTACATGGCTGCTGCTAAAATTATCCTTAATAACTCATATCCCCCTG
GTGGTAACATCCCTATAAAGCAATCCAACATTTTATCCGAATGAGGAGTT
GGTCTTACAGTAAAATTGCAGACTTCGGAATGGATTTCGATGTCGCACTC
CTCGCAATACGTGCAATGCTTTTTGGGTTATTGGTGACATATATTACCCA
AGATACACCAGCACTCGTTCAAAAACCAGAGGAATATTTTGATAGCCCTC
TCACGCAAGATGTTTGGAATAAATTCTTGGATGATCTGTTGAAGAAGGAA
GTTATATATGAATTCCACGTTTATAAACTATTCCGATTATTTGGTTGGGT
GGTAGACGTTGCCACAAAAATCTACGTCAAAAGCAAAGTGCTTAACGACT
TTTTTCTACTCCATGGGATTACAGAAAGCAGAATCACATGTACGGTGCTT
ACGGCTGGTCCGCATTACAATATCATTCTGAATATTTCTTCGAATTGACC
AATAGTATTGCGCTGCCCGAATGGTTTGTCGTGGAGGATAAGGATATGAC
ACAGAGGAAAGATTTGACGGGTTTCGGACACGGCAAGAAAGACATTTTCG
AATTGTTGAACGATCTCGCAAGTAATACGACATTGAAAGAGAAAATCAAA
CTGGATCATCAAAAAGGCTTCGAGTTCAGATGGATCAACAGTATTCCCCT
GTGTTTCCTAACGATACCAATGATGAAAAGGTTATCCAGTGTGTCTATGA
ACGTTGGATGGAGCAAAACGGTTCTGGTTCCTCATCTATGGACAAATATT
ACATGGCTGCTGCTAAAATTATCCTTAATAACTCATATCCCCCTGGTGGT
AACATCCCTATAAAGCAATCCAACATTTTATCCGAATGAGGAGTTGGTCT
TACAGTAAAATTGCAGACTTCGGAATGGATTTCGATGTCGCACTCCTCGC
AATACGTGCAATGCTTTTTGGGTTATTGGTGACATATATTACCCAAGATA
CACCAGCACTCGTTCAAAAACCAGAGGAATATTTTGATAGCCCTCTCACG
CAAGATGTTTGGAATAAATTCTTGGATGATCTGTTGAAGAAGGAAGTTAT
ATATGAATTCCACGTTTATAAACTATTCCGATTATTTGGTTGGGTGGTAG
ACGTTGCCACAAAAATCTACGTCAAAAGCAAAGTGCTTAACGACTTTTTT
CTACTCCATGGGATTACAGAAAGCAGAATCACATGTACGGTGCTTACGGC
TGGTCCGCATTACAATATCATTCTGAATATTTCTTCGAATTGACCAATAG
TATTGCGCTGCCCGAATGGTTTGTCGTGGAGGATAAGGATATGACACAGA
GGAAAGATTTGACGGGTTTCGGACACGGCAAGAAAGACATTTTCGAATTG
TTGAACGATCTCGCAAGTAATACGACATTGAAAGAGAAAATCAAACTGGA
TCATCAAAAAGGCTTCGAGTTCAGATGGATCAACAGTATTCCCCTGTGTT
TCCTAACGATACCAATGATGAAAAGGTTATCCAGTGTGTCTATGAACGTT
GGATGGAGCAAAACGGTTCTGGTTCCTCATCTATGGACAAATATTACATG
GCTGCTGCTAAAATTATCCTTAATAACTCATATCCCCCTGGTGGTAACAT
CCCTATAAAGCAATCCAACATTTTATCCGAATGAGGAGTTGGTCTTACAG
TAAAATTGCAGACTTCGGAATGGATTTCGATGTCGCACTCCTCGCAATAC
GTGCAATGCTTTTTGGGTTATTGGTGACATATATTACCCAAGATACACCA
GCACTCGTTCAAAAACCAGAGGAATATTTTGATAGCCCTCTCACGCAAGA
TGTTTGGAATAAATTCTTGGATGATCTGTTGAAGAAGGAAGTTATATATG
AATTCCACGTTTATAAACTATTCCGATTATTTGGTTGGGTGGTAGACGTT
GCCACAAAAATCTACGTCAAAAGCAAAGTGCTTAACGACTTTTTTCTACT
CCATGGGATTACAGAAAGCAGAATCACATGTACGGTGCTTACGGCTGGTC
CGCATTACAATATCATTCTGAATATTTCTTCGAATTGACCAATAGTATTG
CGCTGCCCGAATGGTTTGTCGTGGAGGATAAGGATATGACACAGAGGAAA
GATTTGACGGGTTTCGGACACGGCAAGAAAGACATTTTCGAATTGTTGAA
CGATCTCGCAAGTAATACGACATTGAAAGAGAAAATCAAACTGGATCATC
AAAAAGGCTTCGAGTTCAGATGGATCAACAGTATTCCCCTGTGTTTCCTA
ACGATACCAATGATGAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012186XLOC_012186Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021722-proteinTCONS_00021722-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021722-exon-sc0000393-1575043694:50594..50724TCONS_00021722-exon-sc0000393-1575043694:50594..50724Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1575043694:49993..50157TCONS_00021722-exon-sc0000393-1575043694:49993..50157Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1575043694:49198..49312TCONS_00021722-exon-sc0000393-1575043694:49198..49312Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1575043694:48635..48803TCONS_00021722-exon-sc0000393-1575043694:48635..48803Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1575043694:47073..47197TCONS_00021722-exon-sc0000393-1575043694:47073..47197Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1575043694:46701..46830TCONS_00021722-exon-sc0000393-1575043694:46701..46830Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1575043694:46195..46291TCONS_00021722-exon-sc0000393-1575043694:46195..46291Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1575043694:45587..45819TCONS_00021722-exon-sc0000393-1575043694:45587..45819Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1575043694:44316..44488TCONS_00021722-exon-sc0000393-1575043694:44316..44488Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1575043694:43306..43936TCONS_00021722-exon-sc0000393-1575043694:43306..43936Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1575043694:42951..43221TCONS_00021722-exon-sc0000393-1575043694:42951..43221Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1510915933:50594..50724TCONS_00021722-exon-sc0000393-1510915933:50594..50724Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1510915933:49993..50157TCONS_00021722-exon-sc0000393-1510915933:49993..50157Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1510915933:49198..49312TCONS_00021722-exon-sc0000393-1510915933:49198..49312Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1510915933:48635..48803TCONS_00021722-exon-sc0000393-1510915933:48635..48803Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1510915933:47073..47197TCONS_00021722-exon-sc0000393-1510915933:47073..47197Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1510915933:46701..46830TCONS_00021722-exon-sc0000393-1510915933:46701..46830Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1510915933:46195..46291TCONS_00021722-exon-sc0000393-1510915933:46195..46291Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1510915933:45587..45819TCONS_00021722-exon-sc0000393-1510915933:45587..45819Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1510915933:44316..44488TCONS_00021722-exon-sc0000393-1510915933:44316..44488Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1510915933:43306..43936TCONS_00021722-exon-sc0000393-1510915933:43306..43936Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1510915933:42951..43221TCONS_00021722-exon-sc0000393-1510915933:42951..43221Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1491911889:50594..50724TCONS_00021722-exon-sc0000393-1491911889:50594..50724Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1491911889:49993..50157TCONS_00021722-exon-sc0000393-1491911889:49993..50157Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1491911889:49198..49312TCONS_00021722-exon-sc0000393-1491911889:49198..49312Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1491911889:48635..48803TCONS_00021722-exon-sc0000393-1491911889:48635..48803Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1491911889:47073..47197TCONS_00021722-exon-sc0000393-1491911889:47073..47197Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1491911889:46701..46830TCONS_00021722-exon-sc0000393-1491911889:46701..46830Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1491911889:46195..46291TCONS_00021722-exon-sc0000393-1491911889:46195..46291Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1491911889:45587..45819TCONS_00021722-exon-sc0000393-1491911889:45587..45819Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1491911889:44316..44488TCONS_00021722-exon-sc0000393-1491911889:44316..44488Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1491911889:43306..43936TCONS_00021722-exon-sc0000393-1491911889:43306..43936Clytia hemisphaericaexon
TCONS_00021722-exon-sc0000393-1491911889:42951..43221TCONS_00021722-exon-sc0000393-1491911889:42951..43221Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000393supercontigsc0000393:42951..50724 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.141493	0	0	0	0	0	0.11028	0	0	0.093954	0.111487	0	0	0	0.203745	0	0	0	0	0	0	0	0	0	0	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR025337DUF4243
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021722 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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