TCONS_00021733 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021733
Unique NameTCONS_00021733
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2881

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021733 ID=TCONS_00021733|Name=TCONS_00021733|organism=Clytia hemisphaerica|type=transcript|length=2881bp
Catcatttatgagagtttcttgttgacggggactttaaatttcatcgaat
aagggagcctatcaaatagtagaacgtcgaattagagagatgcCTTTTAC
GTTCGTTTATTTGAAatctgttttttgtttttgtttcattttagaGAACA
CTAATGAATTCAGAGTTgagaaactgaagaagaaataaatatatatttca
atgaaagatgttttgaaaagaaagaagattAATCGAAATATGGCATcgat
tttattgtatttttgatCGAAACTAAACTAGAATTACACTGAGACATTCA
AAGGTGCAAATACATTAGAAGACCCATACACACGACAAATAAAATTTCAT
GAACTTGAATGTATGATTTTTTAGATCAAAATTAAACTAGAATTACACTG
AGACATTCAAAGGTACAAATACACTAAGAGACCCATACACACAATAAATA
AAAGTGCATGAACACTTGTAGATAATAAACAACATTTAACGTATACACAA
CATTACGCATTATATCGTTATCTTACACAATGAAATTAAGCCGTTACCTG
ACTGCAATATGTATCCTTTCAATCACAACACTAGGCTATATCTATTTCGT
GCACTACAACGAAACATCCACTCAtttgaaatatatcaaatatAGTCTGT
TTAATAAATTATGTATTGATCAAGGCCTCCAGACGGCCTGGTGTCGTCAG
GAAGAGGTCCTTGCAGATAAGATTGAGAGCAACGATAATAAACTTTTAGA
CAAAATAGTGcgaaagaaattgaaagaaaaacttAAGAAGGAGATTAACC
AGTACAAACTTAATAAACAAGTCAAactcaacaacaaaagaaataaacaa
GAACAAGATACATCGTTGAAGCGCATAGACCATGAAATCAAGAGTACAGC
TAGACCAACAAAGACTACTAAAACACCATCTTCAACCTGGATTCCAACAA
CAGGCTACCGGCGCAAGCCACAGAAATGCAATATACCCATAGTGGATCCT
TTTCACCGCGAAGTTCGACCATACATTACTTACAAATGGACGCAAAAATG
TACTCTAGCCTGGGAGAAATCTCGAGTGGAAAAAGGGGTCTTGTACGTAG
ACCTTGCAGATGTGTCGGCGGTAAATATGAGTTACATAAAACGTATAAGT
GATGAGGATAATGAATTGGACACACGGAATATTTATCATGAGTCGACCTC
GACAAGGTCTAAGAAAGATAAATTGGCCATCAAACTAGAAGATGATTTCA
TTCGAGTTGacatcaaaaccaaaacaaaagagAAACCTTTCTCCGAATAT
CTCATGTATCCTGTCAAAAAGCCACCCCAAAAGGGCGAGCCGCCCTTCAA
GAATTATGACGCCCAAAAAGACAAATACAACGTATTGATGGTGATGACAG
ATTCGGTTTCTCACGCATGCGCACAAAGATATCTGACTAAAACGTACAAA
TATTTGCAAGAAAATCCACACACTGTCATTATGAAGGGACATACTATTCT
TGGTGACGCCACCACGCCACAAATCTCCGCCATGTTCTTTGGCGGCAAAC
CAGAACATTTAACGCCAGAAGGACGAAAAGGAGAAAGGGGAGCCCAAACA
ATCGATAGTTGGCCGTCTATATTCAAAGATTACAAGAAAGACGGTTATGT
CACAATGCACAGCGAAGATCAAGCATGGATTGCCGCTTTCAATTTTCGAC
TGATGGGATTCTCTAAACCACCTGCGCATAAGTATCTCCGTTCTTGGTGG
CAACGCTCGGCGGACTTACGATGTACAAATGAATCGCGGGCGGACTCGTG
CCCAATTAAATACGTTTTGAATTATTATAAAGACTTTCGACTAGAATATG
ACAAAGAATTAAGTTTAGCATATTTGTCGACGTCAGCATTAACACATAAT
GAGCCTGAGAAGATTCATATGTTCGATGAAGggtttttgaatttcttcaa
aGACATGAAAAATTCTGGGAAACTGGATTCAACTATAGTAATTTTCTTTG
GTGATCATGGTATGAGGGACGGCAATTTTCGGCATACAGCACAAGGCACA
ACTGAAGAAAGACTCCCGTTTATGAGTTTAACATTTCCACCTAGATTTTA
CGCCGAGCATCCAAATAAAATACGAAACTTGAAACGAAATTCTGAGGTTT
TAACAACTCCCTATGACATGCATGTAACACTGAAGCATATATTGGATTTG
ACAAAATCACCGGTCAAGCATACATACGGAAAGAGCCTGTTTCAAAACAT
TGTAAAACATAATAGAACGTGTGCTGATGCAGGAGTTCCATTTACGTGGT
GTGTATGTACCGAATTTGTTCCGGTACAGAAAAACAACGGACAGGTACTC
AACGTTGCTAAGGAAATGGTTAAaacaataaataataaattaacCTCCAA
ACCTGAGTCGCGTGACCGATGTGTAGAACTTGAACTAGATTCAATCATCC
GCGCAGGAATTCTGTCACTAAAACATGGGGATAGGTTATACGATACCTAT
CAAATAGTATTCAAAGTGAAGCCGAATGGAGGTATATTTGAAAGTTCCGC
TGAATTAAATAAAAAGGATAAAACAATAAAAGTGAACGTGAATTTCAGTC
GGTTAAATCACTACGGGAAACAACCGAAGTGTATTGAACAGAGATACCCA
TACTTgcgtaaattttgtttttgtaaagattATATTTCATaggattgggc
ttttccagaaaaaaaaattaaatatgggGGGGGGTGGATCATTGGTGGGT
agtattttttggaaattttgtagatttttcaccaCCCACCGGACActtta
tcctccacccccatgtacggatattttctgaaagagccCATTTTGGTTTT
ATTCAAGGTGGGCTTTGTTCGAATTTTAGGG
Run BLAST on NCBI

protein sequence of TCONS_00021733-protein

>TCONS_00021733-protein ID=TCONS_00021733-protein|Name=TCONS_00021733-protein|organism=Clytia hemisphaerica|type=polypeptide|length=720bp
MKLSRYLTAICILSITTLGYIYFVHYNETSTHLKYIKYSLFNKLCIDQGL
QTAWCRQEEVLADKIESNDNKLLDKIVRKKLKEKLKKEINQYKLNKQVKL
NNKRNKQEQDTSLKRIDHEIKSTARPTKTTKTPSSTWIPTTGYRRKPQKC
NIPIVDPFHREVRPYITYKWTQKCTLAWEKSRVEKGVLYVDLADVSAVNM
SYIKRISDEDNELDTRNIYHESTSTRSKKDKLAIKLEDDFIRVDIKTKTK
EKPFSEYLMYPVKKPPQKGEPPFKNYDAQKDKYNVLMVMTDSVSHACAQR
YLTKTYKYLQENPHTVIMKGHTILGDATTPQISAMFFGGKPEHLTPEGRK
GERGAQTIDSWPSIFKDYKKDGYVTMHSEDQAWIAAFNFRLMGFSKPPAH
KYLRSWWQRSADLRCTNESRADSCPIKYVLNYYKDFRLEYDKELSLAYLS
TSALTHNEPEKIHMFDEGFLNFFKDMKNSGKLDSTIVIFFGDHGMRDGNF
RHTAQGTTEERLPFMSLTFPPRFYAEHPNKIRNLKRNSEVLTTPYDMHVT
LKHILDLTKSPVKHTYGKSLFQNIVKHNRTCADAGVPFTWCVCTEFVPVQ
KNNGQVLNVAKEMVKTINNKLTSKPESRDRCVELELDSIIRAGILSLKHG
DRLYDTYQIVFKVKPNGGIFESSAELNKKDKTIKVNVNFSRLNHYGKQPK
CIEQRYPYLRKFCFCKDYIS
Run BLAST on NCBI

transcript from alignment at sc0000393:272497..278812-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021733 ID=TCONS_00021733|Name=TCONS_00021733|organism=Clytia hemisphaerica|type=transcript|length=6316bp|location=Sequence derived from alignment at sc0000393:272497..278812- (Clytia hemisphaerica)
CATCATTTATGAGAGTTTCTTGTTGACGGGGACTTTAAATTTCATCGAAT AAGGGAGCCTATCAAATAGTAGAACGTCGAATTAGAGAGATGCCTTTTAC GTTCGTTTATTTGAAATCTGTTTTTTGTTTTTGTTTCATTTTAGAGAACA CTAATGAATTCAGAGTTGAGAAACTGAAGAAGAAATAAATATATATTTCA ATGAAAGATGTTTTGAAAAGAAAGAAGATTAATCGAAATATGGCATCGAT TTTATTGTATTTTTGATCGAAACTAAACTAGAATTACACTGAGACATTCA AAGGTGCAAATACATTAGAAGACCCATACACACGACAAATAAAATTTCAT GAACTTGAATGTATGATTTTTTAGATCAAAATTAAACTAGAATTACACTG AGACATTCAAAGGTACAAATACACTAAGAGACCCATACACACAATAAATA AAAGTGCATGAACACTTGTAGATAATAAACAACATTTAACGTATACACAA CATTACGCATTATATCGTTATCTTACACAATGAAATTAAGCCGTTACCTG ACTGCAATATGTATCCTTTCAATCACAACACTAGGCTATATCTATTTCGT GCACTACAACGAAACATCCACTCATTTGAAATATATCAAATATAGTCTGT TTAATAAATTATGTATTGATCAAGGCCTCCAGACGGCCTGGTGTCGTCAG GAAGAGGTCCTTGCAGATAAGATTGAGAGCAACGATAATAAACTTTTAGA CAAAATAGTGCGAAAGAAATTGAAAGAAAAACTTAAGAAGGAGATTAACC AGTACAAACTTAATAAACAAGTCAAACTCAACAACAAAAGAAATAAACAA GAACAAGATACATCGTTGAAGCGCATAGACCATGAAATCAAGAGTACAGC TAGACCAACAAAGACTACTAAAACACCATCTTCAACCTGGATTCCAACAA CAGGCTACCGGCGCAAGCCACAGAAATGCAATATACCCATAGTGGATCCT TTTCACCGCGAAGTTCGACCATACATTACTTACAAATGGACGCAAAAATG TACTCTAGCCTGGGAGAAATCTCGAGTGGAAAAAGGGGTCTTGTACGTAG ACCTTGCAGATGTGTCGGCGGTAAATATGAGTTACATAAAACGTATAAGT GATGAGGATAATGAATTGGACACACGGAATATTTATCATGAGTCGACCTC GACAAGGTCTAAGAAAGGTAAGGCAAAAGGCTTAAAGAAATAATCAAATG GTTTGAGATATTGGTATTTGGATCCTTCTATTGTCTCAGGCAAAATCTCA AAATATTTTTGCCTCACTATTTTTCCAAAGTCCAGATATTTATGTTACAA GTTTTTGGCTTTTAAGGATGAAAAAAATAGAATTTCAACGTAAGAAACCC TGTAAGAAACCATTTTCAAAAATTTCAATTTTTGATATCTCGATTTTGGA AAATTGTTACACATCAAAAATACTTGGAGGTTTTACTAAGGACCACAGAA GGTTTCTGTAATCTTGATATCTCGAACCATCTGATTATCCCTTTAAATAA AACACTACCTGGAGCATCTCCGTCCCTAACTGAAGAAAAATTACGCGCCA TCTTTTAAAGAGTTACGTCACAGTTTTTCTTGCGCTAGTCTTGAAATTTG GAAGTCATTGCAGTGTCAAAAAAATCAAGGTTTCTACTGTGACCTTTCTA AGATGTCTCCGTGGCATTAGGAAAGGAAGAGCTCTATCTAGGCTGCAACC ATCCCCTCTGATATGATTTGATATAGGGGATGCGTATCGTTTAAAATATT TGTCCCAACTTACCCCCGTCTTTTCTTTTTTCTTTTTTGATTATGCGTCA TAGCAATACAATGACTTCTTTTTTTCTTTGATCAATGAATGAAAATTGAT AATTATGAAAACAACAGCACAATTTTTTATCATTCTTTGATTGGATGTGA CGAAATTATGTAAATTTATGCAAATTTTGGTTACCCCAATTTGAGGTAAC TCTCGGACGAGAATTTCAAACACGATACGCATCTCCTATAACAAAATAAA TTCTGGGGATGCTCGCAGCCTAAGCTCTATCTAGTGTTTATATATGATAT GATGAGTACACTCCGTGCAGATGGAATCTTTTTACACATCTATACTTAAA TTAACCTAGACTAGTAAACTAGTCGGTTATTACTTATAATAAAACTGTCA ATCAAATAATGTAAACACTAATTATATTCAGCGCGCGTGAGAGAAAAGGA AAATAACCGACTAGAAGCTTCTTCCAACACCTTTTTTTCTTCACCTAAAA TCGTAAGGAGAGACATACAGATTTCTGTATGTCTGACCCGTGCGGGATTG CATTTATTTTTCTTTCTGTTTATTGCATTTTCGGAAATGCTCATTTATTT ATACNACCCGTGCGGGATTGCATTTATTTTTCTTTCTGTTTATTGTGTTT TTGGAAATACTCATTTATTTATACGTTCCCATGTTTAATGTTACTATGAA ATATCATTTAGTCAAAAAAGTTGGATGGATTCTCAAAAACCTAAAAAAGG TTGTAAAATTAAACAATGTTTTTGAGGGAAGAAGCTTCTAGTCGTTGAAA TTCAGAAAAGACACGCAACCTCACCTCTTCGATTCTTTTTATTTGGAGCT TAAATTTTTTGTATATGGGTCTGTTTTCTGAAATTAACCTTTCATCAATT CCCTTTGATCTTGATCTAAAAGCGACGGTATGTGTGGACAAAAATTGGCT CTTAAAATTTGACCGTCATGACCGAACATGGTCGGATTAACTGTTTTTTG AACTTTTTGACTGGCTTCCTTATTTGACTGACGGCCTAAAAGGTGAATTG GATTTCCGGATCAATATCTCGATAGTCGAGTACATATTTTTTTATAAGCA AGTGTCTATCCCTATATCAGGCTCACATTATGCTTAGCATTCAATTGTTC TCAAACAATAGAGCCATTGTTTAGGTACCCAAAACTGAGCCTGCATATGC TTATAAACGTTATGCTTATAAAAGAAAAAACATGTAATACAGTAACACAT TTGTTTGATTCGCAAAGTATTTTACACTTGATCTTTTTTTCAGTATAACG ATTGTCAACTTATATTCTTTTCACTTTTCAAGATAAATTGGCCATCAAAC TAGAAGATGATTTCATTCGAGTTGACATCAAAACCAAAACAAAAGAGAAA CCTTTCTCCGAATATCTCATGTATCCTGTCAAAAAGCCACCCCAAAAGGG CGAGCCGCCCTTCAAGAATTATGACGCCCAAAAAGACAAATACAACGTAT TGATGGTGATGACAGATTCGGTTTCTCACGCATGCGCACAAAGATATCTG ACTAAAACGTACAAATATTTGCAAGAAAATCCACACACTGTCATTATGAA GGTAATGATTTTTCTGAAAAATATGTTCTACCTACACAATGAATCTTACA AGATTGGTCAAATTGCCAAATTGATTCCCCGCCAAAAAAAGTTATCTTGG CTAATCGCTAAATCAAGGCAACGCCACGAGGCAACGTCAAAATTTACCAA CTTAAAGATGTACGACTATTGATTGTGAAGCTTGAGTCTTGATCGCCTCC AGATAGAGGTTGCGATAAAATTCTTAAGGGAAAGGAAATGGGATTTTCAA AGTCTTCAAAAGAAAGTAGGGTCTTCGTAAAGGATTGAGAGAGCTACCCA TCCTGACCCACCAGCCATGTTGAGTTAAGGATCTTTCAACGAGTTAAATA TATCATTATTAATCTTTATAGGGACATACTATTCTTGGTGACGCCACCAC GCCACAAATCTCCGCCATGTTCTTTGGCGGCAAACCAGAACATTTAACGC CAGAAGGACGAAAAGGAGAAAGGGGTAAGAACATAGCAGTATGGAGCCTT TCCAGATGAGATGGAGTTTTTATAATATACTTTAATAATTGGTCATTTGA AGTAATAAAAATGCTTTGCTCTGAAGGTCGGGCATATTATAACATCTGAA AGGTTATTACGGGATAGGCATTACGGGATTTGACTTGACCGCGTTCAAAG ATTTTGCTCGGAGCTTGGAAACGATCAACAGCAAGCTATCATCTGATTCC AAATCGGATACAGGTGCTACCCAGAAAAAATAACAAATTATGAGTTGTTA TATTTTCTGGCTAGCACCATATTCGTATATGGTTCGGAATCATGTGCTAG CTTGCTTATATGTAAACAAACATAAACAATCCCTAATTTAGCTTCATTTA CATGAAAATACAACTTAAAACATAAATTTCTTGCTTATTCCTACTTACCC AGACATACTCGGTAAATATTACACTAACCTTCATAGTTTTCAGGACCTCA AAAGTGAATTTTCAATGTGCTCTGTAAAATTACAAAATTGGGCTTGTTCT GTTGGCACACAAAAAGTGAAGTTAATCGTTAATAAGATACAAACTACCTA TACAGAAGTCTGTAAACAAGTCTATAGATCTATCTGAAGACAAAATTGTC TGTTTTGTACACATGTTTGTACTGCTGCTAGAGACTTTGACTGACTTTGA CTGTTGTCGGTCAGTCGGTTGTGTTCAGTTGTCTGGCGGTCAACAGTCGT TTCGGTAGAACCGCACAAGATTATACCAACATAAAAGTTACTTAAAAAGC ATAAGGATCATACCTGTTACTGTTTCTTTATGATCTTTGAGTCTGGCTTT GAGAAAATTCAGTAAAAATCAATGTAACAAAAGTTCTTCACTACTTGCCC TTCTCGAATCCGAAATTTGCTTTGTCATTGAAGCGCCGAAACTATAAAAT TAGTAGTTTTTGACGGTTAGCGCAGCAGAGATTTTCATGCTAAATTTTTG TCCAGTCGGGACGAACAGAATTCTTTGAGCAAGCGAAGATATAGCCATTG AACCCGACTGTTGTTGGCACATCGAAGGGCTACTACTTAACCTCTCCGAT GGTATATTGGCCACATCGAAGTTTGTAAAAGAAATCAAATCCAAATAATT TTCTCCATTAAATCGCAATTTCAGGAGCCCAAACAATCGATAGTTGGCCG TCTATATTCAAAGATTACAAGAAAGACGGTTATGTCACAATGCACAGCGA AGATCAAGCATGGATTGCCGCTTTCAATTTTCGACTGATGGGATTCTCTA AACCACCTGCGCATAAGTATCTCCGTTCTTGGTGGCAACGCTCGGCGGAC TTACGATGTACAAATGAATCGCGGGCGGACTCGTGCCCAATTAAATACGT TTTGAATTATTATAAAGACTTTCGACTAGAATATGACAAAGAATTAAGTT TAGCATATTTGTCGACGTCAGCATTAACACATAATGAGCCTGAGAAGATT CATATGTTCGATGAAGGGTTTTTGAATTTCTTCAAAGACATGAAAAATTC TGGGAAACTGGATTCAACTATAGTAATTTTCTTTGGTGATCATGGTATGA GGGACGGCAATTTTCGGCATACAGCACAAGGCACAACTGAAGAAAGACTC CCGTTTATGAGTTTAACATTTCCACCTAGATTTTACGCCGAGCATCCAAA TAAAATACGAAACTTGAAACGAAATTCTGAGGTTTTAACAACTCCCTATG ACATGCATGTAACACTGAAGCATATATTGGATTTGACAAAATCACCGGTC AAGCATACATACGGAAAGAGCCTGTTTCAAAACATTGTAAAACATAATAG AACGTGTGCTGATGCAGGAGTTCCATTTACGTGGTGTGTATGTACCGAAT TTGTTCCGGTACAGAAAAACAACGGACAGGTACTCAACGTTGCTAAGGAA ATGGTTAAAACAATAAATAATAAATTAACCTCCAAACCTGAGTCGCGTGA CCGATGTGTAGAACTTGAACTAGATTCAATCATCCGCGCAGGAATTCTGT CACTAAAACATGGGGATAGGTTATACGATACCTATCAAATAGTATTCAAA GTGAAGCCGAATGGAGGTATATTTGAAAGTTCCGCTGAATTAAATAAAAA GGATAAAACAATAAAAGTGAACGTGAATTTCAGTCGGTTAAATCACTACG GGAAACAACCGAAGTGTATTGAACAGAGATACCCATACTTGCGTAAATTT TGTTTTTGTAAAGATTATATTTCATAGGATTGGGCTTTTCCAGAAAAAAA AATTAAATATGGGGGGGGGTGGATCATTGGTGGGTAGTATTTTTTGGAAA TTTTGTAGATTTTTCACCACCCACCGGACACTTTATCCTCCACCCCCATG TACGGATATTTTCTGAAAGAGCCCATTTTGGTTTTATTCAAGGTGGGCTT TGTTCGAATTTTAGGG

Coding sequence (CDS) from alignment at sc0000393:272497..278812-

>TCONS_00021733 ID=TCONS_00021733|Name=TCONS_00021733|organism=Clytia hemisphaerica|type=CDS|length=8652bp|location=Sequence derived from alignment at sc0000393:272497..278812- (Clytia hemisphaerica)
GAGCCCAAACAATCGATAGTTGGCCGTCTATATTCAAAGATTACAAGAAA
GACGGTTATGTCACAATGCACAGCGAAGATCAAGCATGGATTGCCGCTTT
CAATTTTCGACTGATGGGATTCTCTAAACCACCTGCGCATAAGTATCTCC
GTTCTTGGTGGCAACGCTCGGCGGACTTACGATGTACAAATGAATCGCGG
GCGGACTCGTGCCCAATTAAATACGTTTTGAATTATTATAAAGACTTTCG
ACTAGAATATGACAAAGAATTAAGTTTAGCATATTTGTCGACGTCAGCAT
TAACACATAATGAGCCTGAGAAGATTCATATGTTCGATGAAGGGTTTTTG
AATTTCTTCAAAGACATGAAAAATTCTGGGAAACTGGATTCAACTATAGT
AATTTTCTTTGGTGATCATGGTATGAGGGACGGCAATTTTCGGCATACAG
CACAAGGCACAACTGAAGAAAGACTCCCGTTTATGAGTTTAACATTTCCA
CCTAGATTTTACGCCGAGCATCCAAATAAAATACGAAACTTGAAACGAAA
TTCTGAGGTTTTAACAACTCCCTATGACATGCATGTAACACTGAAGCATA
TATTGGATTTGACAAAATCACCGGTCAAGCATACATACGGAAAGAGCCTG
TTTCAAAACATTGTAAAACATAATAGAACGTGTGCTGATGCAGGAGTTCC
ATTTACGTGGTGTGTATGTACCGAATTTGTTCCGGTACAGAAAAACAACG
GACAGGTACTCAACGTTGCTAAGGAAATGGTTAAAACAATAAATAATAAA
TTAACCTCCAAACCTGAGTCGCGTGACCGATGTGTAGAACTTGAACTAGA
TTCAATCATCCGCGCAGGAATTCTGTCACTAAAACATGGGGATAGGTTAT
ACGATACCTATCAAATAGTATTCAAAGTGAAGCCGAATGGAGGTATATTT
GAAAGTTCCGCTGAATTAAATAAAAAGGATAAAACAATAAAAGTGAACGT
GAATTTCAGTCGGTTAAATCACTACGGGAAACAACCGAAGTGTATTGAAC
AGAGATACCCATACTTGCGTAAATTTTGTTTTTGTAAAGATTATATTTCA
TAGGGACATACTATTCTTGGTGACGCCACCACGCCACAAATCTCCGCCAT
GTTCTTTGGCGGCAAACCAGAACATTTAACGCCAGAAGGACGAAAAGGAG
AAAGGGATAAATTGGCCATCAAACTAGAAGATGATTTCATTCGAGTTGAC
ATCAAAACCAAAACAAAAGAGAAACCTTTCTCCGAATATCTCATGTATCC
TGTCAAAAAGCCACCCCAAAAGGGCGAGCCGCCCTTCAAGAATTATGACG
CCCAAAAAGACAAATACAACGTATTGATGGTGATGACAGATTCGGTTTCT
CACGCATGCGCACAAAGATATCTGACTAAAACGTACAAATATTTGCAAGA
AAATCCACACACTGTCATTATGAAGATGAAATTAAGCCGTTACCTGACTG
CAATATGTATCCTTTCAATCACAACACTAGGCTATATCTATTTCGTGCAC
TACAACGAAACATCCACTCATTTGAAATATATCAAATATAGTCTGTTTAA
TAAATTATGTATTGATCAAGGCCTCCAGACGGCCTGGTGTCGTCAGGAAG
AGGTCCTTGCAGATAAGATTGAGAGCAACGATAATAAACTTTTAGACAAA
ATAGTGCGAAAGAAATTGAAAGAAAAACTTAAGAAGGAGATTAACCAGTA
CAAACTTAATAAACAAGTCAAACTCAACAACAAAAGAAATAAACAAGAAC
AAGATACATCGTTGAAGCGCATAGACCATGAAATCAAGAGTACAGCTAGA
CCAACAAAGACTACTAAAACACCATCTTCAACCTGGATTCCAACAACAGG
CTACCGGCGCAAGCCACAGAAATGCAATATACCCATAGTGGATCCTTTTC
ACCGCGAAGTTCGACCATACATTACTTACAAATGGACGCAAAAATGTACT
CTAGCCTGGGAGAAATCTCGAGTGGAAAAAGGGGTCTTGTACGTAGACCT
TGCAGATGTGTCGGCGGTAAATATGAGTTACATAAAACGTATAAGTGATG
AGGATAATGAATTGGACACACGGAATATTTATCATGAGTCGACCTCGACA
AGGTCTAAGAAAGGAGCCCAAACAATCGATAGTTGGCCGTCTATATTCAA
AGATTACAAGAAAGACGGTTATGTCACAATGCACAGCGAAGATCAAGCAT
GGATTGCCGCTTTCAATTTTCGACTGATGGGATTCTCTAAACCACCTGCG
CATAAGTATCTCCGTTCTTGGTGGCAACGCTCGGCGGACTTACGATGTAC
AAATGAATCGCGGGCGGACTCGTGCCCAATTAAATACGTTTTGAATTATT
ATAAAGACTTTCGACTAGAATATGACAAAGAATTAAGTTTAGCATATTTG
TCGACGTCAGCATTAACACATAATGAGCCTGAGAAGATTCATATGTTCGA
TGAAGGGTTTTTGAATTTCTTCAAAGACATGAAAAATTCTGGGAAACTGG
ATTCAACTATAGTAATTTTCTTTGGTGATCATGGTATGAGGGACGGCAAT
TTTCGGCATACAGCACAAGGCACAACTGAAGAAAGACTCCCGTTTATGAG
TTTAACATTTCCACCTAGATTTTACGCCGAGCATCCAAATAAAATACGAA
ACTTGAAACGAAATTCTGAGGTTTTAACAACTCCCTATGACATGCATGTA
ACACTGAAGCATATATTGGATTTGACAAAATCACCGGTCAAGCATACATA
CGGAAAGAGCCTGTTTCAAAACATTGTAAAACATAATAGAACGTGTGCTG
ATGCAGGAGTTCCATTTACGTGGTGTGTATGTACCGAATTTGTTCCGGTA
CAGAAAAACAACGGACAGGTACTCAACGTTGCTAAGGAAATGGTTAAAAC
AATAAATAATAAATTAACCTCCAAACCTGAGTCGCGTGACCGATGTGTAG
AACTTGAACTAGATTCAATCATCCGCGCAGGAATTCTGTCACTAAAACAT
GGGGATAGGTTATACGATACCTATCAAATAGTATTCAAAGTGAAGCCGAA
TGGAGGTATATTTGAAAGTTCCGCTGAATTAAATAAAAAGGATAAAACAA
TAAAAGTGAACGTGAATTTCAGTCGGTTAAATCACTACGGGAAACAACCG
AAGTGTATTGAACAGAGATACCCATACTTGCGTAAATTTTGTTTTTGTAA
AGATTATATTTCATAGGGACATACTATTCTTGGTGACGCCACCACGCCAC
AAATCTCCGCCATGTTCTTTGGCGGCAAACCAGAACATTTAACGCCAGAA
GGACGAAAAGGAGAAAGGGATAAATTGGCCATCAAACTAGAAGATGATTT
CATTCGAGTTGACATCAAAACCAAAACAAAAGAGAAACCTTTCTCCGAAT
ATCTCATGTATCCTGTCAAAAAGCCACCCCAAAAGGGCGAGCCGCCCTTC
AAGAATTATGACGCCCAAAAAGACAAATACAACGTATTGATGGTGATGAC
AGATTCGGTTTCTCACGCATGCGCACAAAGATATCTGACTAAAACGTACA
AATATTTGCAAGAAAATCCACACACTGTCATTATGAAGATGAAATTAAGC
CGTTACCTGACTGCAATATGTATCCTTTCAATCACAACACTAGGCTATAT
CTATTTCGTGCACTACAACGAAACATCCACTCATTTGAAATATATCAAAT
ATAGTCTGTTTAATAAATTATGTATTGATCAAGGCCTCCAGACGGCCTGG
TGTCGTCAGGAAGAGGTCCTTGCAGATAAGATTGAGAGCAACGATAATAA
ACTTTTAGACAAAATAGTGCGAAAGAAATTGAAAGAAAAACTTAAGAAGG
AGATTAACCAGTACAAACTTAATAAACAAGTCAAACTCAACAACAAAAGA
AATAAACAAGAACAAGATACATCGTTGAAGCGCATAGACCATGAAATCAA
GAGTACAGCTAGACCAACAAAGACTACTAAAACACCATCTTCAACCTGGA
TTCCAACAACAGGCTACCGGCGCAAGCCACAGAAATGCAATATACCCATA
GTGGATCCTTTTCACCGCGAAGTTCGACCATACATTACTTACAAATGGAC
GCAAAAATGTACTCTAGCCTGGGAGAAATCTCGAGTGGAAAAAGGGGTCT
TGTACGTAGACCTTGCAGATGTGTCGGCGGTAAATATGAGTTACATAAAA
CGTATAAGTGATGAGGATAATGAATTGGACACACGGAATATTTATCATGA
GTCGACCTCGACAAGGTCTAAGAAAGGAGCCCAAACAATCGATAGTTGGC
CGTCTATATTCAAAGATTACAAGAAAGACGGTTATGTCACAATGCACAGC
GAAGATCAAGCATGGATTGCCGCTTTCAATTTTCGACTGATGGGATTCTC
TAAACCACCTGCGCATAAGTATCTCCGTTCTTGGTGGCAACGCTCGGCGG
ACTTACGATGTACAAATGAATCGCGGGCGGACTCGTGCCCAATTAAATAC
GTTTTGAATTATTATAAAGACTTTCGACTAGAATATGACAAAGAATTAAG
TTTAGCATATTTGTCGACGTCAGCATTAACACATAATGAGCCTGAGAAGA
TTCATATGTTCGATGAAGGGTTTTTGAATTTCTTCAAAGACATGAAAAAT
TCTGGGAAACTGGATTCAACTATAGTAATTTTCTTTGGTGATCATGGTAT
GAGGGACGGCAATTTTCGGCATACAGCACAAGGCACAACTGAAGAAAGAC
TCCCGTTTATGAGTTTAACATTTCCACCTAGATTTTACGCCGAGCATCCA
AATAAAATACGAAACTTGAAACGAAATTCTGAGGTTTTAACAACTCCCTA
TGACATGCATGTAACACTGAAGCATATATTGGATTTGACAAAATCACCGG
TCAAGCATACATACGGAAAGAGCCTGTTTCAAAACATTGTAAAACATAAT
AGAACGTGTGCTGATGCAGGAGTTCCATTTACGTGGTGTGTATGTACCGA
ATTTGTTCCGGTACAGAAAAACAACGGACAGGTACTCAACGTTGCTAAGG
AAATGGTTAAAACAATAAATAATAAATTAACCTCCAAACCTGAGTCGCGT
GACCGATGTGTAGAACTTGAACTAGATTCAATCATCCGCGCAGGAATTCT
GTCACTAAAACATGGGGATAGGTTATACGATACCTATCAAATAGTATTCA
AAGTGAAGCCGAATGGAGGTATATTTGAAAGTTCCGCTGAATTAAATAAA
AAGGATAAAACAATAAAAGTGAACGTGAATTTCAGTCGGTTAAATCACTA
CGGGAAACAACCGAAGTGTATTGAACAGAGATACCCATACTTGCGTAAAT
TTTGTTTTTGTAAAGATTATATTTCATAGGGACATACTATTCTTGGTGAC
GCCACCACGCCACAAATCTCCGCCATGTTCTTTGGCGGCAAACCAGAACA
TTTAACGCCAGAAGGACGAAAAGGAGAAAGGGATAAATTGGCCATCAAAC
TAGAAGATGATTTCATTCGAGTTGACATCAAAACCAAAACAAAAGAGAAA
CCTTTCTCCGAATATCTCATGTATCCTGTCAAAAAGCCACCCCAAAAGGG
CGAGCCGCCCTTCAAGAATTATGACGCCCAAAAAGACAAATACAACGTAT
TGATGGTGATGACAGATTCGGTTTCTCACGCATGCGCACAAAGATATCTG
ACTAAAACGTACAAATATTTGCAAGAAAATCCACACACTGTCATTATGAA
GATGAAATTAAGCCGTTACCTGACTGCAATATGTATCCTTTCAATCACAA
CACTAGGCTATATCTATTTCGTGCACTACAACGAAACATCCACTCATTTG
AAATATATCAAATATAGTCTGTTTAATAAATTATGTATTGATCAAGGCCT
CCAGACGGCCTGGTGTCGTCAGGAAGAGGTCCTTGCAGATAAGATTGAGA
GCAACGATAATAAACTTTTAGACAAAATAGTGCGAAAGAAATTGAAAGAA
AAACTTAAGAAGGAGATTAACCAGTACAAACTTAATAAACAAGTCAAACT
CAACAACAAAAGAAATAAACAAGAACAAGATACATCGTTGAAGCGCATAG
ACCATGAAATCAAGAGTACAGCTAGACCAACAAAGACTACTAAAACACCA
TCTTCAACCTGGATTCCAACAACAGGCTACCGGCGCAAGCCACAGAAATG
CAATATACCCATAGTGGATCCTTTTCACCGCGAAGTTCGACCATACATTA
CTTACAAATGGACGCAAAAATGTACTCTAGCCTGGGAGAAATCTCGAGTG
GAAAAAGGGGTCTTGTACGTAGACCTTGCAGATGTGTCGGCGGTAAATAT
GAGTTACATAAAACGTATAAGTGATGAGGATAATGAATTGGACACACGGA
ATATTTATCATGAGTCGACCTCGACAAGGTCTAAGAAAGGAGCCCAAACA
ATCGATAGTTGGCCGTCTATATTCAAAGATTACAAGAAAGACGGTTATGT
CACAATGCACAGCGAAGATCAAGCATGGATTGCCGCTTTCAATTTTCGAC
TGATGGGATTCTCTAAACCACCTGCGCATAAGTATCTCCGTTCTTGGTGG
CAACGCTCGGCGGACTTACGATGTACAAATGAATCGCGGGCGGACTCGTG
CCCAATTAAATACGTTTTGAATTATTATAAAGACTTTCGACTAGAATATG
ACAAAGAATTAAGTTTAGCATATTTGTCGACGTCAGCATTAACACATAAT
GAGCCTGAGAAGATTCATATGTTCGATGAAGGGTTTTTGAATTTCTTCAA
AGACATGAAAAATTCTGGGAAACTGGATTCAACTATAGTAATTTTCTTTG
GTGATCATGGTATGAGGGACGGCAATTTTCGGCATACAGCACAAGGCACA
ACTGAAGAAAGACTCCCGTTTATGAGTTTAACATTTCCACCTAGATTTTA
CGCCGAGCATCCAAATAAAATACGAAACTTGAAACGAAATTCTGAGGTTT
TAACAACTCCCTATGACATGCATGTAACACTGAAGCATATATTGGATTTG
ACAAAATCACCGGTCAAGCATACATACGGAAAGAGCCTGTTTCAAAACAT
TGTAAAACATAATAGAACGTGTGCTGATGCAGGAGTTCCATTTACGTGGT
GTGTATGTACCGAATTTGTTCCGGTACAGAAAAACAACGGACAGGTACTC
AACGTTGCTAAGGAAATGGTTAAAACAATAAATAATAAATTAACCTCCAA
ACCTGAGTCGCGTGACCGATGTGTAGAACTTGAACTAGATTCAATCATCC
GCGCAGGAATTCTGTCACTAAAACATGGGGATAGGTTATACGATACCTAT
CAAATAGTATTCAAAGTGAAGCCGAATGGAGGTATATTTGAAAGTTCCGC
TGAATTAAATAAAAAGGATAAAACAATAAAAGTGAACGTGAATTTCAGTC
GGTTAAATCACTACGGGAAACAACCGAAGTGTATTGAACAGAGATACCCA
TACTTGCGTAAATTTTGTTTTTGTAAAGATTATATTTCATAGGGACATAC
TATTCTTGGTGACGCCACCACGCCACAAATCTCCGCCATGTTCTTTGGCG
GCAAACCAGAACATTTAACGCCAGAAGGACGAAAAGGAGAAAGGGATAAA
TTGGCCATCAAACTAGAAGATGATTTCATTCGAGTTGACATCAAAACCAA
AACAAAAGAGAAACCTTTCTCCGAATATCTCATGTATCCTGTCAAAAAGC
CACCCCAAAAGGGCGAGCCGCCCTTCAAGAATTATGACGCCCAAAAAGAC
AAATACAACGTATTGATGGTGATGACAGATTCGGTTTCTCACGCATGCGC
ACAAAGATATCTGACTAAAACGTACAAATATTTGCAAGAAAATCCACACA
CTGTCATTATGAAGATGAAATTAAGCCGTTACCTGACTGCAATATGTATC
CTTTCAATCACAACACTAGGCTATATCTATTTCGTGCACTACAACGAAAC
ATCCACTCATTTGAAATATATCAAATATAGTCTGTTTAATAAATTATGTA
TTGATCAAGGCCTCCAGACGGCCTGGTGTCGTCAGGAAGAGGTCCTTGCA
GATAAGATTGAGAGCAACGATAATAAACTTTTAGACAAAATAGTGCGAAA
GAAATTGAAAGAAAAACTTAAGAAGGAGATTAACCAGTACAAACTTAATA
AACAAGTCAAACTCAACAACAAAAGAAATAAACAAGAACAAGATACATCG
TTGAAGCGCATAGACCATGAAATCAAGAGTACAGCTAGACCAACAAAGAC
TACTAAAACACCATCTTCAACCTGGATTCCAACAACAGGCTACCGGCGCA
AGCCACAGAAATGCAATATACCCATAGTGGATCCTTTTCACCGCGAAGTT
CGACCATACATTACTTACAAATGGACGCAAAAATGTACTCTAGCCTGGGA
GAAATCTCGAGTGGAAAAAGGGGTCTTGTACGTAGACCTTGCAGATGTGT
CGGCGGTAAATATGAGTTACATAAAACGTATAAGTGATGAGGATAATGAA
TTGGACACACGGAATATTTATCATGAGTCGACCTCGACAAGGTCTAAGAA
AG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012194XLOC_012194Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021733-exon-sc0000393-1575043694:277596..278812TCONS_00021733-exon-sc0000393-1575043694:277596..278812Clytia hemisphaericaexon
TCONS_00021733-exon-sc0000393-1575043694:275412..275680TCONS_00021733-exon-sc0000393-1575043694:275412..275680Clytia hemisphaericaexon
TCONS_00021733-exon-sc0000393-1575043694:274939..275041TCONS_00021733-exon-sc0000393-1575043694:274939..275041Clytia hemisphaericaexon
TCONS_00021733-exon-sc0000393-1575043694:272497..273788TCONS_00021733-exon-sc0000393-1575043694:272497..273788Clytia hemisphaericaexon
TCONS_00021733-exon-sc0000393-1510915933:277596..278812TCONS_00021733-exon-sc0000393-1510915933:277596..278812Clytia hemisphaericaexon
TCONS_00021733-exon-sc0000393-1510915933:275412..275680TCONS_00021733-exon-sc0000393-1510915933:275412..275680Clytia hemisphaericaexon
TCONS_00021733-exon-sc0000393-1510915933:274939..275041TCONS_00021733-exon-sc0000393-1510915933:274939..275041Clytia hemisphaericaexon
TCONS_00021733-exon-sc0000393-1510915933:272497..273788TCONS_00021733-exon-sc0000393-1510915933:272497..273788Clytia hemisphaericaexon
TCONS_00021733-exon-sc0000393-1491911889:277596..278812TCONS_00021733-exon-sc0000393-1491911889:277596..278812Clytia hemisphaericaexon
TCONS_00021733-exon-sc0000393-1491911889:275412..275680TCONS_00021733-exon-sc0000393-1491911889:275412..275680Clytia hemisphaericaexon
TCONS_00021733-exon-sc0000393-1491911889:274939..275041TCONS_00021733-exon-sc0000393-1491911889:274939..275041Clytia hemisphaericaexon
TCONS_00021733-exon-sc0000393-1491911889:272497..273788TCONS_00021733-exon-sc0000393-1491911889:272497..273788Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021733-proteinTCONS_00021733-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000393supercontigsc0000393:272497..278812 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0269459 0.0132054 0.0305862 0.030637 1.61478 1.44404 8.51304 9.44451 2.77857 2.56045 2.34312 1.81401 5.7088 4.67152 4.64001 6.20277 1.69128 1.52831 4.38022 4.05949 0.589518 0.307604 0.648371 0.792131 0.893726 1.53373 0.704251 0.545665 0.529734 0.590357
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR017849Alkaline_Pase-like_a/b/a
IPR004245DUF229
IPR017850Alkaline_phosphatase_core
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021733 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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