TCONS_00021753 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021753
Unique NameTCONS_00021753
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1831

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021753 ID=TCONS_00021753|Name=TCONS_00021753|organism=Clytia hemisphaerica|type=transcript|length=1831bp
TGTGAGAGATCAACTTCAGGTCCAACAATGGGAAGTCCATCATCCATTCT
TTGAGCTTTAGATTTCACCTGTCAACCTGTTAGATGTTTTTTGAAGAGGG
AGTTTTGTTGATTTGTGTTCTTGCAGATGCGTCAGCTGACTTGCTTTGCC
TTCTCAATTATTTTGGaggaaaacgaaagttgtttaGAAAGATGACTATA
AAGCCAATTAATGCAAAGTAGATTCTGATTTCTTGTCTAGATATCAAACT
ATCAAACTTGCTTTGATAAAATATAAGTCATTGCTTGAAAgaacaaataa
acaaacatGGTGGCATTGTGATCTTTTTCGCAAATCAAAACCTTAACTTA
ACTACCTAAAGTGTCTTTTCTATCGATCACTTTAAAACCAAGTATGTTTC
AAGATACACCAAGGTCTTCATCTCCAATCAATAATGAGAAAAACACAACT
TTTGGAAAGAGTCAATTGTCAACAGCCTTTTCATTTCCTGCTGGTGGAGG
AGATAATTTATTTCAAGAAACAGGAGACTCAACACGCTCTTTGCTTGCTC
CAATATATAGCAAGCAAGAAAAGGCTACTCTTGATATTTCTTCCAGTATT
AAGACACCAAGGAATCACagtaaaaacagtttttccaatGAGAGGGTTGC
ATTGGTTACAGGAGGAAAAAGTACTCCTGAAGATACCGGCAAGGAAAATG
CTATAAACCAACATAACAGCGATGTAACGGACAACCTTCaagaagaaaag
aacaaatcaaCAAAAGAGAGATCGTCATCAGTGGAGAAAAACACACAGGA
AGAAAAATCCAACAATGCCCACAACACAACAATGACAACAGACAGTTCAT
TTGCTTCTTCTTCCAACGACCACCAAACGGCATCATCTTCAACATCCTCC
CTAAACAATGTCAGCCTGGATGAGATGATCGATTTGAAAGGAAAGACTTG
GGATGATTGGTTCCTGGAGAAAGCCATGCTTGAGATGAAGAGAATCAAAC
TGATCAACGTCAAGAAGAAAGAGTTGGACAAGAAACGTTCACAAGAACGA
GAAGAGAAGATGAAGAAAGAAATGCAAGCAGCAGAAAATCGTCAAGATTG
GATGaagaggaaaaagttccaagcTGAAAAACAACGGTGTGAAGAACTCG
ctcaaaaagaatttcaaagatTAAAGGAAAAGCAAGAGAAGGACTTACTG
GAGGAAAAAGCCAAACAGAATTACGATGAATGGTACGAGAAAAAGAAAGC
TCAAGAAAAAGAAACACGTTTACGAAAGAAACACGAGAGAAATTTGGAAG
AAGAGAGAACTCAAGAGAAGCAGCAGCAAGCGGACGATGCTTACAAACGA
TGGCTGTCGCAAACTGACGAGCAAAGTAAACCTTTCAGATATCATGGAGG
AGGACGTGTgtccaaaaagaaaaacctttACTCGTCTCCTGATCCGACCT
TCACGAACCCTTTACCATGGGTGGATAGTGTGATGGAGGAGGAGAAAATG
TACAGGTGTAATCaccaaaagaaaatcttctcaTCACCTCCAATGTTGTG
GCAAGATATTGAAAACCGCCGCAAACGAACTTCTGATAACAGGTTGAGGA
AAACTTCGGTCACGTGATAAAAAGATGCTCTGGCATTTCGAAATgcactt
tttaaaatatttttctatcttCCTCCTTAACTTAAGAATCctacaatttt
tatattttacctaGTATTAAGTTAGAATAATATCAACCTTAAATATGata
tgttttgaaatattttacatCGTTCGTTTATTTTCCTAACACTATTCATG
GTCTACCAGGTCACGTGTCATTTAATTATTT
Run BLAST on NCBI

protein sequence of TCONS_00021753-protein

>TCONS_00021753-protein ID=TCONS_00021753-protein|Name=TCONS_00021753-protein|organism=Clytia hemisphaerica|type=polypeptide|length=407bp
MFQDTPRSSSPINNEKNTTFGKSQLSTAFSFPAGGGDNLFQETGDSTRSL
LAPIYSKQEKATLDISSSIKTPRNHSKNSFSNERVALVTGGKSTPEDTGK
ENAINQHNSDVTDNLQEEKNKSTKERSSSVEKNTQEEKSNNAHNTTMTTD
SSFASSSNDHQTASSSTSSLNNVSLDEMIDLKGKTWDDWFLEKAMLEMKR
IKLINVKKKELDKKRSQEREEKMKKEMQAAENRQDWMKRKKFQAEKQRCE
ELAQKEFQRLKEKQEKDLLEEKAKQNYDEWYEKKKAQEKETRLRKKHERN
LEEERTQEKQQQADDAYKRWLSQTDEQSKPFRYHGGGRVSKKKNLYSSPD
PTFTNPLPWVDSVMEEEKMYRCNHQKKIFSSPPMLWQDIENRRKRTSDNR
LRKTSVT
Run BLAST on NCBI

transcript from alignment at sc0000394:204125..211987+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021753 ID=TCONS_00021753|Name=TCONS_00021753|organism=Clytia hemisphaerica|type=transcript|length=7863bp|location=Sequence derived from alignment at sc0000394:204125..211987+ (Clytia hemisphaerica)
TGTGAGAGATCAACTTCAGGTCCAACAATGGGAAGTCCATCATCCATTCT TTGAGCTTTAGATTTCACCTGTCAACCTGTTAGATGTTTTTTGAAGAGGG AGTTTTGTTGATTTGTGTTCTTGCAGATGCGTCAGCTGACTTGCTTTGCC TTCTCAATTATTTTGGaggaaaacgaaagttgtttaGAAAGATGACTATA AAGCCAATTAATGCAAAGTAGATTCTGATTTCTTGTCTAGATATCAAACT ATCAAACTTGCTTTGATAAAATATAAGTCATTGCTTGAAAgaacaaataa acaaacatGGTGGCATTGTGATCTTTTTCGCAAATCAAAACCTTAACTTA ACTACCTAAAGTGTCTTTTCTATCGATCACTTTAAAACCAAGTATGTTTC AAGATACACCAAGGTCTTCATCTCCAATCAATAATGAGAAAAACACAACT TTTGGAAAGAGTCAATTGTCAACAGCCTTTTCATTTCCTGCTGGTGGAGG AGATAATTTATTTCAAGAAACAGGAGACTCAACACGCTCTTTGCTTGCTC CAATATATAGCAAGCAAGAAAAGGCTACTCTTGATATTTCTTCCAGTATT AAGACACCAAGGAATCACagtaaaaacagtttttccaatGAGAGGGTTGC ATTGGTTACAGGAGGAAAAAGGTAGCAATTTCAtgaatttcattcttttt tgttAGATTTATGAAGCCCTAGAGAGATGttgtgctttaagctcttccaa gcaaaaaaaagtgaatagcgcaaaaaatattgttgctattgttttcgaaa acctgtgaagcttcttattggtcaagcgctgaaattctattgtactgtaa tgtcacgtgacttaggtaggatttcctacctaacctcggcacacttttca gccaaagcacgccatctagcccttcgggctttacaaatctatgatgtcga cattagaccaagttacggtatcacaaaaataaactgaaataaaaCACTAA TACTTTATAGCATGTTGCGCTGCTGGAAGATTCGCAGCTTTATTGTGTGC TAATTCAGGAGAATGtcaatttgaacaaaattttttttcaaaatcgaaaa agtgataataccttaagggaagaaattttagcgaattcGGCGAATTGCCT TGGGTataaatttagccaaattttctttccttcAAATTTAAGTAGGTCTT TCACCAAAATAAGGTGCAAGAccttattttattaatttaatttatattat tattaatttatttttaattttaatttaatttaatttcaatttagtCTCAA TTTcttgagtctgctaaatcacgTGCCTCACGTGCCCTAGTGCCTTAACT TTTTTTTACGTGCCTCTAGTGCCTCAAGTGCCCTAGTGCCTCACGTGCTc taaatttttcacatttactttttttttttcaagaaaaaaatccaaaatcc aaaatccaaaatcacgtgaaaattggcaaaaatcacaaaaaaatccaaaa aaacaaaaaagtctcgTACAACTTTTCGGGAATGATTTACCCCTTTTTCA TGTGCCCTTAAATTTTCACGTAGCCTATTGTTTTTCACTTGTCCTCAATT CTCTGGTGTTAACAGGGTTTTGCAAACTGAACGAAATATTActtacacct ttactttacTTTAAATTGCATTTTAATGCACAAAATTCTCGagttaaaag ttaaaagttaaaagtgcgagttgcaaattaaaaatgCTAGTTGCAAATTT AGTATAAAGTGATATacactttttatataagaacaaatttatatgatcaa ttcagaaaaataattatcattatcattatttttcaaagctatgtgctttt ttttttttaaacaacaaaAGGAAATCAGTAAAAAGCTTTCGCCGCTCAGC GCACGTGGTGGTCAGCGGTTCTTATAGCTGTAAAAATTACAGTCGAAACA AGGGGTAATCATCTTGTCACAAGCGAGTATAATACTTTTCAACAGCATTC GCTGACACTTTTTCTCTCACTTTCTTTCTCTTTACTCGCAGGTGCCGAAT AAACGGGAGGGGgtagggggcgtttattaatttttcgattttttttccaa cTCCCGGACCTTACACACCGAGATTGTTGTCGTAGCAGCTAGTTTTCTTT CGGAATTGTTTTCCACAACGCCTCAACGGCGATataattatacatttaaa tGATTCCAGGTCGTTGAACAGAAATAGTcagaataatttgaaaaatttaa aaatttgaaacaaagcTTTAACAATATTTTAATTAGCTAATTTCTGTGTT TAGAAAGGCAACATAAGttaaatgaaaattatccaaagGTTGAGtttatt aattaaaaaattagGGCACTAGGGCACGGGAAATTTTAAGGCACTTGAGG CACGTGAGACACTAAAAAAGCTGTCAATTACCGATACCGAGTACCTATCG ACTTAATCCCGAAATACCGATAAGAAAGACCTCATATCGCTAAAAAAATT TAGGGCACGTGAAAATTTTAGGGCACTTGAAAAGTTTAGGGCACGTGAGA ATTTTAGGGCACGTGAGAATTTTAGGGCACATGAAAATTTTAGGGCACTA GGGCACGTGAAATTTTAGGGCACTAGGGCACGTGAAATTTTAAGGCACTA GGGCACTTAAGGCACTAGGGCACTAGAAGCACGTAAAAAAAGTTAAGGCA CTAGGGCACTTGAGGCAcgtgatttagcagactccaaTTTCTCCCTTAAA GccttttttcttcgattttcagctaaaatattgaaccAAAATGCGTCGtt aattttcgccaaatttagaaattttattaaatcgccaaaataaattcttc caaattgcaccaaaattggcgagcctattcgccaaaatttcttctcttaa ggtattgAATTTGCAAAACTGGAGGTAGCATGGGATTCCAAGCTCAcaat tttagaagaaaaaaaacgttaCCTCACACAGTTCTAAGATTATatagctt ggtgcaggtagatcaGTCTGATACAGAATGTTTGAAACAGTCTGTGTGcg aacccctgttgacagactttctgatcTTTGGAACCCCAGGTAGACAcgca taatcaacttaccatcaAAACTCTTCAACAAGctctaaaatttttcaaaa ctactaaaaaccacatcaaaacatcagccacatgtttttaaaaaactttc agcCAACAGCAATTTtgttagtctacacaatagacagcttcAGGCTTTTA GGCTTTTAAGCTTTTAAAagctcttggtctataggcactgctataggcgg ccactagtaacccccaccgggaatagcttattgattggttttaaacataa tagacaactttcacaaaagatatgtttatcaatagagatttcaaataaaa gaatgtttaaaacacagcttattggcttaggtttcgaaactctctattgt ttcataaaaacctcagtgcgcatgcgatttattcGGAGAActgaaatatt caaaacaagagtaGTGCTCATACGAAGACTTTTTAGGACTTAATTTGGGT GTCTTTTTATTTAGAATTATCTCTAATCAATCGTACAGGTCTCTAATTTT ACTTTGGTCTATTGGATATTTTGGATGGAAATACTTGTGAGGGGAATAGT TTATTGTGATAAACCCGGATTTTTCGCTGCGATCACTATGCAATGGTCAT ATACCGACTAATCTATGAGCAGTACCTAATTAATTGGTCAACTGATAAtt caaatgatttttaattttcgataatattgaaaaatcAATCACAATCAATC AATTTTATTTAGCTTGTCCTTATGTGATAATGCATTGGAGTCTTCATAGC TCAACACGTAAGGGGGGGGGCACAAATTGTTCGActtatggaaatttcga gttatggagattggtttataaggcatttttaactgaagggaccaaaaaat tttgttcgatttaacTCGACATGGATGcgtacaaaaaaaattattgaacc CCGTTTTGATCAATGAGTAAATGTAAGTTTTATACCAAAACTGTCTTTTT GCATAGGTTTTGCATAATATGACCACAGCAAATTTGCCGTCATGATTTCT GCTTAATAATCCAAGATGGTGGAAAGATCTATATGAAAGTCACGAGCCCT GCTATTCATAACTTGTGTCGGTCATTCAAATCAGTATTTAAAAGTAGTTC TAACAAATTGTTGAGTGTATTAAAAGTTATTGGTTTACGTTGTCCTTTCA AATCGGTTTGACTTTTTCATCCACTTGTGATGATTTGAATAGTAGTTTTA AGTCCAGTTTCGGaattttttcgagaaaaatgCATGTTATCATGAATATT AGCGTACGAAAATGACTTGTTGCTTGGTAAGACTTAACACATAGCCATTG TAATCgtattttgagcttttaaagtaAGAGCAAATAGttcttttcgaatg ttttaatgATCATTTTATTTCATCATCCCATTTTTTTCGTTATTCGGTCC TCTTAAACCTCTTTACTACACTGTCAAACTGGGTTTTCCGAACTTACTGT ATACGCGTAAAAGTTGTCTGCAGTAGGAGCAGAAATCATcaatctatatt tttatttcaaatctaGTACTCCTGAAGATACCGGCAAGGAAAATGCTATA AACCAACATAACAGCGATGTAACGGACAACCTTCaagaagaaaagaacaa atcaaCAAAAGAGAGATCGTCATCAGTGGAGAAAAACACACAGGAAGAAA AATCCAACAATGCCCACAACACAACAATGACAACAGACAGTTCATTTGCT TCTTCTTCCAACGACCACCAAACGGCATCATCTTCAACATCCTCCCTAAA CAATGTCAGGTAATGCCAATTCCTTTTTACACAGGGAAAGTATTTCTTTG TGTCCGAAACATGCTTTTTATaacgaaaaatttatttttgaaaaatagca gCGAGTTTGCTATAAATGTTTGATTacataaagtaaaaacaaatcttaag atgaataaaaaattattttacacgAGCCCCTTCTTCTCGAAATGGATGAG TTGATGATCATCTTCCTTCTTCTTGCAACATTGACAATATAAAAGACACG ATGTTAATAAGTTCCCAAACATCAACATCTCCatcagaaagaaaaataga agcaTACCAAAGTCTATAGAGGTCAGGTTTTCCAGACTTCTGTTTGATTC ATATGCACGAATGTATCTTACTCGCGATCTTGGTAAAAGAACGATACTTA TAAACAGGATGATCGCTGAGCGGTTGGCCAGTTGAAACGCATCGAAACCT AACTTGATGGAAAGAAATGCTgtgctttttttgaaaactgcAATGTACCC TAAGGTGATATTGATGATTAAAGATAAATGTGTCCATGCTGGGAATGTGT TGTATGTTTGCAAGAACACGCCAATCATATCATCTTTGAATTTTCCTCCG AATCCATAATAAAGTGATCTTGCCATTATTGTCATAAAAACGAATACCAT CAGTAAATGTGTCAATACACGTTGTCTTTTCCATATTTTAAGTTCCTCAG TGTTTGAAAACCGTTTGTCCATTTTTACGGTGAGATTGGAATATTTTATA CTTCCTCCTTTCCTTTATTGATTGTTGTTCGCCTTATTGTTAACTGCTTA TTGGAAACCTTAACTCACTACGTCGAAATTAAAAGTTGGAGGATGGTAAC CATTGTTGAACaagtcattaaaaaataatgCGATTCATTAATTCCGTTTA CATCGTTTTCAACATGATCATGTCTCTTCTATTTTTTACAAGAAGTAGAC CAGCTAAATTTCTTTAACACAACTGCACAATATCTCAAGAAGCATTCTCC TCAATAAAAATAACGTATATGTCTGATAACATACAAAACGAATTGTACGT TTAACTTCACACGATAaccaaaaatattacaaaaccGTAAACCGATTAGA TGTTATCAAAGAAAATGATACACGAAACTTTTACTCGCCAAATGATTGAA GTTAGGACTTCAGTGTTAACTCATACTCATAAAAGACTCAATGGAGGTCG GTCAAAATAAACAAGGAGGTGGGAAATTTCTGTGTATTGCACACATATGG TGCTTCTTGGATTGTAATGTTTATGAAAGTAGACGCACTATCTTTTTTAG ATCTTCCAGTAATGCTAGTGGAGAGAAAGATTAGCGTTATTTTAAACTGC AAACCACGATAGTGAAATGATTCTAAGAAAAAACTTACAACTCACAACCT CAGCTTTCTAAAAGATTTGGCTGAGGTGGTTTTGAGCTATGACCTGTTTA CAGTGGgatgaaattgaattattttgggtactttaatgggataaactttc gcggggattaaatttcgtggatttcgaggaaaatccgcgaaattaagtcc caatggaaatttggaagggcctcatccgcgaattatttctcaataaaact caaaatatgtcaaataaatactattttgaatggttacttgcatcaaagaa gcgctaataatgtgtacttcaacaaccaacatgcatgttttttgacagta aaagtaacaaaatcgtgaaaataatgccacccaatagtgccacccgcgaa atttttgaatttcgcggataagcccaaccgcgaaagtttatcccattaaa gtataatttTACGTCCGTAGGCGTCAAAGGGTTAAATATTGAGTTCTTCT CTTTTGTAGCCTGGATGAGATGATCGATTTGAAAGGAAAGACTTGGGATG ATTGGTTCCTGGAGAAAGCCATGCTTGAGATGAAGAGAATCAAACTGATC AACGTCAAGAAGAAAGAGTTGGACAAGAAACGTTCACAAGAACGAGAAGA GAAGATGAAGAAAGAAATGCAAGCAGCAGAAAATCGTCAAGATTGGATGa agaggaaaaagttccaagcTGAAAAACAACGGTGTGAAGAACTCGctcaa aaagaatttcaaagatTAAAGGTATGTAAATGTTCAAATGCCAATTATGG AGAGGACTGTCTGCTTATCTGTTTAATATGAATAGATAAACTAAACCTTA GCCATTTGCTTTATATAACCTTCCCCACAGCTGTTAGTACGGCATGGAGT AAACCTTTCTGAGACAACACCCACTAGTACTAGTGTCGCCTTACTAAACA CTTGATGAAGGGAAAAATATAAACTTACTATCCttgaaacttttattttt tgatatagGAAAAGCAAGAGAAGGACTTACTGGAGGAAAAAGCCAAACAG AATTACGATGAATGGTACGAGAAAAAGAAAGCTCAAGAAAAAGAAACACG TTTACGAAAGAAACACGAGAGAAATTTGGAAGAAGAGAGAACTCAAGAGA AGCAGCAGCAAGCGGACGATGCTTACAAACGATGGCTGTCGCAAACTGAC GAGCAAAGTAAACCTTTCAGATATCATGGAGGAGGACGTGTgtccaaaaa gaaaaacctttACTCGTCTCCTGATCCGACCTTCACGAACCCTTTACCAT GGGTGGATAGTGTGATGGAGGAGGAGAAAATGTACAGGTGTAATCaccaa aagaaaatcttctcaTCACCTCCAATGTTGTGGCAAGATATTGAAAACCG CCGCAAACGAACTTCTGATAACAGGTTGAGGAAAACTTCGGTCACGTGAT AAAAAGATGCTCTGGCATTTCGAAATgcactttttaaaatatttttctat cttCCTCCTTAACTTAAGAATCctacaatttttatattttacctaGTATT AAGTTAGAATAATATCAACCTTAAATATGatatgttttgaaatattttac atCGTTCGTTTATTTTCCTAACACTATTCATGGTCTACCAGGTCACGTGT CATTTAATTATTT

Coding sequence (CDS) from alignment at sc0000394:204125..211987+

>TCONS_00021753 ID=TCONS_00021753|Name=TCONS_00021753|organism=Clytia hemisphaerica|type=CDS|length=4896bp|location=Sequence derived from alignment at sc0000394:204125..211987+ (Clytia hemisphaerica)
ATGTTTCAAGATACACCAAGGTCTTCATCTCCAATCAATAATGAGAAAAA
CACAACTTTTGGAAAGAGTCAATTGTCAACAGCCTTTTCATTTCCTGCTG
GTGGAGGAGATAATTTATTTCAAGAAACAGGAGACTCAACACGCTCTTTG
CTTGCTCCAATATATAGCAAGCAAGAAAAGGCTACTCTTGATATTTCTTC
CAGTATTAAGACACCAAGGAATCACagtaaaaacagtttttccaatGAGA
GGGTTGCATTGGTTACAGGAGGAAAAAGTACTCCTGAAGATACCGGCAAG
GAAAATGCTATAAACCAACATAACAGCGATGTAACGGACAACCTTCaaga
agaaaagaacaaatcaaCAAAAGAGAGATCGTCATCAGTGGAGAAAAACA
CACAGGAAGAAAAATCCAACAATGCCCACAACACAACAATGACAACAGAC
AGTTCATTTGCTTCTTCTTCCAACGACCACCAAACGGCATCATCTTCAAC
ATCCTCCCTAAACAATGTCAGCCTGGATGAGATGATCGATTTGAAAGGAA
AGACTTGGGATGATTGGTTCCTGGAGAAAGCCATGCTTGAGATGAAGAGA
ATCAAACTGATCAACGTCAAGAAGAAAGAGTTGGACAAGAAACGTTCACA
AGAACGAGAAGAGAAGATGAAGAAAGAAATGCAAGCAGCAGAAAATCGTC
AAGATTGGATGaagaggaaaaagttccaagcTGAAAAACAACGGTGTGAA
GAACTCGctcaaaaagaatttcaaagatTAAAGGAAAAGCAAGAGAAGGA
CTTACTGGAGGAAAAAGCCAAACAGAATTACGATGAATGGTACGAGAAAA
AGAAAGCTCAAGAAAAAGAAACACGTTTACGAAAGAAACACGAGAGAAAT
TTGGAAGAAGAGAGAACTCAAGAGAAGCAGCAGCAAGCGGACGATGCTTA
CAAACGATGGCTGTCGCAAACTGACGAGCAAAGTAAACCTTTCAGATATC
ATGGAGGAGGACGTGTgtccaaaaagaaaaacctttACTCGTCTCCTGAT
CCGACCTTCACGAACCCTTTACCATGGGTGGATAGTGTGATGGAGGAGGA
GAAAATGTACAGGTGTAATCaccaaaagaaaatcttctcaTCACCTCCAA
TGTTGTGGCAAGATATTGAAAACCGCCGCAAACGAACTTCTGATAACAGG
TTGAGGAAAACTTCGGTCACGTGAATGTTTCAAGATACACCAAGGTCTTC
ATCTCCAATCAATAATGAGAAAAACACAACTTTTGGAAAGAGTCAATTGT
CAACAGCCTTTTCATTTCCTGCTGGTGGAGGAGATAATTTATTTCAAGAA
ACAGGAGACTCAACACGCTCTTTGCTTGCTCCAATATATAGCAAGCAAGA
AAAGGCTACTCTTGATATTTCTTCCAGTATTAAGACACCAAGGAATCACa
gtaaaaacagtttttccaatGAGAGGGTTGCATTGGTTACAGGAGGAAAA
AGTACTCCTGAAGATACCGGCAAGGAAAATGCTATAAACCAACATAACAG
CGATGTAACGGACAACCTTCaagaagaaaagaacaaatcaaCAAAAGAGA
GATCGTCATCAGTGGAGAAAAACACACAGGAAGAAAAATCCAACAATGCC
CACAACACAACAATGACAACAGACAGTTCATTTGCTTCTTCTTCCAACGA
CCACCAAACGGCATCATCTTCAACATCCTCCCTAAACAATGTCAGCCTGG
ATGAGATGATCGATTTGAAAGGAAAGACTTGGGATGATTGGTTCCTGGAG
AAAGCCATGCTTGAGATGAAGAGAATCAAACTGATCAACGTCAAGAAGAA
AGAGTTGGACAAGAAACGTTCACAAGAACGAGAAGAGAAGATGAAGAAAG
AAATGCAAGCAGCAGAAAATCGTCAAGATTGGATGaagaggaaaaagttc
caagcTGAAAAACAACGGTGTGAAGAACTCGctcaaaaagaatttcaaag
atTAAAGGAAAAGCAAGAGAAGGACTTACTGGAGGAAAAAGCCAAACAGA
ATTACGATGAATGGTACGAGAAAAAGAAAGCTCAAGAAAAAGAAACACGT
TTACGAAAGAAACACGAGAGAAATTTGGAAGAAGAGAGAACTCAAGAGAA
GCAGCAGCAAGCGGACGATGCTTACAAACGATGGCTGTCGCAAACTGACG
AGCAAAGTAAACCTTTCAGATATCATGGAGGAGGACGTGTgtccaaaaag
aaaaacctttACTCGTCTCCTGATCCGACCTTCACGAACCCTTTACCATG
GGTGGATAGTGTGATGGAGGAGGAGAAAATGTACAGGTGTAATCaccaaa
agaaaatcttctcaTCACCTCCAATGTTGTGGCAAGATATTGAAAACCGC
CGCAAACGAACTTCTGATAACAGGTTGAGGAAAACTTCGGTCACGTGAAT
GTTTCAAGATACACCAAGGTCTTCATCTCCAATCAATAATGAGAAAAACA
CAACTTTTGGAAAGAGTCAATTGTCAACAGCCTTTTCATTTCCTGCTGGT
GGAGGAGATAATTTATTTCAAGAAACAGGAGACTCAACACGCTCTTTGCT
TGCTCCAATATATAGCAAGCAAGAAAAGGCTACTCTTGATATTTCTTCCA
GTATTAAGACACCAAGGAATCACagtaaaaacagtttttccaatGAGAGG
GTTGCATTGGTTACAGGAGGAAAAAGTACTCCTGAAGATACCGGCAAGGA
AAATGCTATAAACCAACATAACAGCGATGTAACGGACAACCTTCaagaag
aaaagaacaaatcaaCAAAAGAGAGATCGTCATCAGTGGAGAAAAACACA
CAGGAAGAAAAATCCAACAATGCCCACAACACAACAATGACAACAGACAG
TTCATTTGCTTCTTCTTCCAACGACCACCAAACGGCATCATCTTCAACAT
CCTCCCTAAACAATGTCAGCCTGGATGAGATGATCGATTTGAAAGGAAAG
ACTTGGGATGATTGGTTCCTGGAGAAAGCCATGCTTGAGATGAAGAGAAT
CAAACTGATCAACGTCAAGAAGAAAGAGTTGGACAAGAAACGTTCACAAG
AACGAGAAGAGAAGATGAAGAAAGAAATGCAAGCAGCAGAAAATCGTCAA
GATTGGATGaagaggaaaaagttccaagcTGAAAAACAACGGTGTGAAGA
ACTCGctcaaaaagaatttcaaagatTAAAGGAAAAGCAAGAGAAGGACT
TACTGGAGGAAAAAGCCAAACAGAATTACGATGAATGGTACGAGAAAAAG
AAAGCTCAAGAAAAAGAAACACGTTTACGAAAGAAACACGAGAGAAATTT
GGAAGAAGAGAGAACTCAAGAGAAGCAGCAGCAAGCGGACGATGCTTACA
AACGATGGCTGTCGCAAACTGACGAGCAAAGTAAACCTTTCAGATATCAT
GGAGGAGGACGTGTgtccaaaaagaaaaacctttACTCGTCTCCTGATCC
GACCTTCACGAACCCTTTACCATGGGTGGATAGTGTGATGGAGGAGGAGA
AAATGTACAGGTGTAATCaccaaaagaaaatcttctcaTCACCTCCAATG
TTGTGGCAAGATATTGAAAACCGCCGCAAACGAACTTCTGATAACAGGTT
GAGGAAAACTTCGGTCACGTGAATGTTTCAAGATACACCAAGGTCTTCAT
CTCCAATCAATAATGAGAAAAACACAACTTTTGGAAAGAGTCAATTGTCA
ACAGCCTTTTCATTTCCTGCTGGTGGAGGAGATAATTTATTTCAAGAAAC
AGGAGACTCAACACGCTCTTTGCTTGCTCCAATATATAGCAAGCAAGAAA
AGGCTACTCTTGATATTTCTTCCAGTATTAAGACACCAAGGAATCACagt
aaaaacagtttttccaatGAGAGGGTTGCATTGGTTACAGGAGGAAAAAG
TACTCCTGAAGATACCGGCAAGGAAAATGCTATAAACCAACATAACAGCG
ATGTAACGGACAACCTTCaagaagaaaagaacaaatcaaCAAAAGAGAGA
TCGTCATCAGTGGAGAAAAACACACAGGAAGAAAAATCCAACAATGCCCA
CAACACAACAATGACAACAGACAGTTCATTTGCTTCTTCTTCCAACGACC
ACCAAACGGCATCATCTTCAACATCCTCCCTAAACAATGTCAGCCTGGAT
GAGATGATCGATTTGAAAGGAAAGACTTGGGATGATTGGTTCCTGGAGAA
AGCCATGCTTGAGATGAAGAGAATCAAACTGATCAACGTCAAGAAGAAAG
AGTTGGACAAGAAACGTTCACAAGAACGAGAAGAGAAGATGAAGAAAGAA
ATGCAAGCAGCAGAAAATCGTCAAGATTGGATGaagaggaaaaagttcca
agcTGAAAAACAACGGTGTGAAGAACTCGctcaaaaagaatttcaaagat
TAAAGGAAAAGCAAGAGAAGGACTTACTGGAGGAAAAAGCCAAACAGAAT
TACGATGAATGGTACGAGAAAAAGAAAGCTCAAGAAAAAGAAACACGTTT
ACGAAAGAAACACGAGAGAAATTTGGAAGAAGAGAGAACTCAAGAGAAGC
AGCAGCAAGCGGACGATGCTTACAAACGATGGCTGTCGCAAACTGACGAG
CAAAGTAAACCTTTCAGATATCATGGAGGAGGACGTGTgtccaaaaagaa
aaacctttACTCGTCTCCTGATCCGACCTTCACGAACCCTTTACCATGGG
TGGATAGTGTGATGGAGGAGGAGAAAATGTACAGGTGTAATCaccaaaag
aaaatcttctcaTCACCTCCAATGTTGTGGCAAGATATTGAAAACCGCCG
CAAACGAACTTCTGATAACAGGTTGAGGAAAACTTCGGTCACGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012210XLOC_012210Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021753-exon-sc0000394-1491911889:204125..204795TCONS_00021753-exon-sc0000394-1491911889:204125..204795Clytia hemisphaericaexon
TCONS_00021753-exon-sc0000394-1510915933:204125..204795TCONS_00021753-exon-sc0000394-1510915933:204125..204795Clytia hemisphaericaexon
TCONS_00021753-exon-sc0000394-1575043694:204125..204795TCONS_00021753-exon-sc0000394-1575043694:204125..204795Clytia hemisphaericaexon
TCONS_00021753-exon-sc0000394-1491911889:208741..208983TCONS_00021753-exon-sc0000394-1491911889:208741..208983Clytia hemisphaericaexon
TCONS_00021753-exon-sc0000394-1510915933:208741..208983TCONS_00021753-exon-sc0000394-1510915933:208741..208983Clytia hemisphaericaexon
TCONS_00021753-exon-sc0000394-1575043694:208741..208983TCONS_00021753-exon-sc0000394-1575043694:208741..208983Clytia hemisphaericaexon
TCONS_00021753-exon-sc0000394-1491911889:210834..211095TCONS_00021753-exon-sc0000394-1491911889:210834..211095Clytia hemisphaericaexon
TCONS_00021753-exon-sc0000394-1510915933:210834..211095TCONS_00021753-exon-sc0000394-1510915933:210834..211095Clytia hemisphaericaexon
TCONS_00021753-exon-sc0000394-1575043694:210834..211095TCONS_00021753-exon-sc0000394-1575043694:210834..211095Clytia hemisphaericaexon
TCONS_00021753-exon-sc0000394-1491911889:211333..211987TCONS_00021753-exon-sc0000394-1491911889:211333..211987Clytia hemisphaericaexon
TCONS_00021753-exon-sc0000394-1510915933:211333..211987TCONS_00021753-exon-sc0000394-1510915933:211333..211987Clytia hemisphaericaexon
TCONS_00021753-exon-sc0000394-1575043694:211333..211987TCONS_00021753-exon-sc0000394-1575043694:211333..211987Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021753-proteinTCONS_00021753-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000394supercontigsc0000394:204125..211987 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 14.3672 7.12071 0 0 0 0 7.47274e-10 0.963092 0 0 0 0 0 0 0 0 0 0 0 0 4.30492 4.8765 0 0 1.32239 1.79936
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021753 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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