XLOC_012210 (gene) - C. hemisphaerica

Overview
NameXLOC_012210
Unique NameXLOC_012210
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000394:204125..215296+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012210 ID=XLOC_012210|Name=XLOC_012210|organism=Clytia hemisphaerica|type=gene|length=11172bp|location=Sequence derived from alignment at sc0000394:204125..215296+ (Clytia hemisphaerica)
TGTGAGAGATCAACTTCAGGTCCAACAATGGGAAGTCCATCATCCATTCT TTGAGCTTTAGATTTCACCTGTCAACCTGTTAGATGTTTTTTGAAGAGGG AGTTTTGTTGATTTGTGTTCTTGCAGATGCGTCAGCTGACTTGCTTTGCC TTCTCAATTATTTTGGaggaaaacgaaagttgtttaGAAAGATGACTATA AAGCCAATTAATGCAAAGTAGATTCTGATTTCTTGTCTAGATATCAAACT ATCAAACTTGCTTTGATAAAATATAAGTCATTGCTTGAAAgaacaaataa acaaacatGGTGGCATTGTGATCTTTTTCGCAAATCAAAACCTTAACTTA ACTACCTAAAGTGTCTTTTCTATCGATCACTTTAAAACCAAGTATGTTTC AAGATACACCAAGGTCTTCATCTCCAATCAATAATGAGAAAAACACAACT TTTGGAAAGAGTCAATTGTCAACAGCCTTTTCATTTCCTGCTGGTGGAGG AGATAATTTATTTCAAGAAACAGGAGACTCAACACGCTCTTTGCTTGCTC CAATATATAGCAAGCAAGAAAAGGCTACTCTTGATATTTCTTCCAGTATT AAGACACCAAGGAATCACagtaaaaacagtttttccaatGAGAGGGTTGC ATTGGTTACAGGAGGAAAAAGGTAGCAATTTCAtgaatttcattcttttt tgttAGATTTATGAAGCCCTAGAGAGATGttgtgctttaagctcttccaa gcaaaaaaaagtgaatagcgcaaaaaatattgttgctattgttttcgaaa acctgtgaagcttcttattggtcaagcgctgaaattctattgtactgtaa tgtcacgtgacttaggtaggatttcctacctaacctcggcacacttttca gccaaagcacgccatctagcccttcgggctttacaaatctatgatgtcga cattagaccaagttacggtatcacaaaaataaactgaaataaaaCACTAA TACTTTATAGCATGTTGCGCTGCTGGAAGATTCGCAGCTTTATTGTGTGC TAATTCAGGAGAATGtcaatttgaacaaaattttttttcaaaatcgaaaa agtgataataccttaagggaagaaattttagcgaattcGGCGAATTGCCT TGGGTataaatttagccaaattttctttccttcAAATTTAAGTAGGTCTT TCACCAAAATAAGGTGCAAGAccttattttattaatttaatttatattat tattaatttatttttaattttaatttaatttaatttcaatttagtCTCAA TTTcttgagtctgctaaatcacgTGCCTCACGTGCCCTAGTGCCTTAACT TTTTTTTACGTGCCTCTAGTGCCTCAAGTGCCCTAGTGCCTCACGTGCTc taaatttttcacatttactttttttttttcaagaaaaaaatccaaaatcc aaaatccaaaatcacgtgaaaattggcaaaaatcacaaaaaaatccaaaa aaacaaaaaagtctcgTACAACTTTTCGGGAATGATTTACCCCTTTTTCA TGTGCCCTTAAATTTTCACGTAGCCTATTGTTTTTCACTTGTCCTCAATT CTCTGGTGTTAACAGGGTTTTGCAAACTGAACGAAATATTActtacacct ttactttacTTTAAATTGCATTTTAATGCACAAAATTCTCGagttaaaag ttaaaagttaaaagtgcgagttgcaaattaaaaatgCTAGTTGCAAATTT AGTATAAAGTGATATacactttttatataagaacaaatttatatgatcaa ttcagaaaaataattatcattatcattatttttcaaagctatgtgctttt ttttttttaaacaacaaaAGGAAATCAGTAAAAAGCTTTCGCCGCTCAGC GCACGTGGTGGTCAGCGGTTCTTATAGCTGTAAAAATTACAGTCGAAACA AGGGGTAATCATCTTGTCACAAGCGAGTATAATACTTTTCAACAGCATTC GCTGACACTTTTTCTCTCACTTTCTTTCTCTTTACTCGCAGGTGCCGAAT AAACGGGAGGGGgtagggggcgtttattaatttttcgattttttttccaa cTCCCGGACCTTACACACCGAGATTGTTGTCGTAGCAGCTAGTTTTCTTT CGGAATTGTTTTCCACAACGCCTCAACGGCGATataattatacatttaaa tGATTCCAGGTCGTTGAACAGAAATAGTcagaataatttgaaaaatttaa aaatttgaaacaaagcTTTAACAATATTTTAATTAGCTAATTTCTGTGTT TAGAAAGGCAACATAAGttaaatgaaaattatccaaagGTTGAGtttatt aattaaaaaattagGGCACTAGGGCACGGGAAATTTTAAGGCACTTGAGG CACGTGAGACACTAAAAAAGCTGTCAATTACCGATACCGAGTACCTATCG ACTTAATCCCGAAATACCGATAAGAAAGACCTCATATCGCTAAAAAAATT TAGGGCACGTGAAAATTTTAGGGCACTTGAAAAGTTTAGGGCACGTGAGA ATTTTAGGGCACGTGAGAATTTTAGGGCACATGAAAATTTTAGGGCACTA GGGCACGTGAAATTTTAGGGCACTAGGGCACGTGAAATTTTAAGGCACTA GGGCACTTAAGGCACTAGGGCACTAGAAGCACGTAAAAAAAGTTAAGGCA CTAGGGCACTTGAGGCAcgtgatttagcagactccaaTTTCTCCCTTAAA GccttttttcttcgattttcagctaaaatattgaaccAAAATGCGTCGtt aattttcgccaaatttagaaattttattaaatcgccaaaataaattcttc caaattgcaccaaaattggcgagcctattcgccaaaatttcttctcttaa ggtattgAATTTGCAAAACTGGAGGTAGCATGGGATTCCAAGCTCAcaat tttagaagaaaaaaaacgttaCCTCACACAGTTCTAAGATTATatagctt ggtgcaggtagatcaGTCTGATACAGAATGTTTGAAACAGTCTGTGTGcg aacccctgttgacagactttctgatcTTTGGAACCCCAGGTAGACAcgca taatcaacttaccatcaAAACTCTTCAACAAGctctaaaatttttcaaaa ctactaaaaaccacatcaaaacatcagccacatgtttttaaaaaactttc agcCAACAGCAATTTtgttagtctacacaatagacagcttcAGGCTTTTA GGCTTTTAAGCTTTTAAAagctcttggtctataggcactgctataggcgg ccactagtaacccccaccgggaatagcttattgattggttttaaacataa tagacaactttcacaaaagatatgtttatcaatagagatttcaaataaaa gaatgtttaaaacacagcttattggcttaggtttcgaaactctctattgt ttcataaaaacctcagtgcgcatgcgatttattcGGAGAActgaaatatt caaaacaagagtaGTGCTCATACGAAGACTTTTTAGGACTTAATTTGGGT GTCTTTTTATTTAGAATTATCTCTAATCAATCGTACAGGTCTCTAATTTT ACTTTGGTCTATTGGATATTTTGGATGGAAATACTTGTGAGGGGAATAGT TTATTGTGATAAACCCGGATTTTTCGCTGCGATCACTATGCAATGGTCAT ATACCGACTAATCTATGAGCAGTACCTAATTAATTGGTCAACTGATAAtt caaatgatttttaattttcgataatattgaaaaatcAATCACAATCAATC AATTTTATTTAGCTTGTCCTTATGTGATAATGCATTGGAGTCTTCATAGC TCAACACGTAAGGGGGGGGGCACAAATTGTTCGActtatggaaatttcga gttatggagattggtttataaggcatttttaactgaagggaccaaaaaat tttgttcgatttaacTCGACATGGATGcgtacaaaaaaaattattgaacc CCGTTTTGATCAATGAGTAAATGTAAGTTTTATACCAAAACTGTCTTTTT GCATAGGTTTTGCATAATATGACCACAGCAAATTTGCCGTCATGATTTCT GCTTAATAATCCAAGATGGTGGAAAGATCTATATGAAAGTCACGAGCCCT GCTATTCATAACTTGTGTCGGTCATTCAAATCAGTATTTAAAAGTAGTTC TAACAAATTGTTGAGTGTATTAAAAGTTATTGGTTTACGTTGTCCTTTCA AATCGGTTTGACTTTTTCATCCACTTGTGATGATTTGAATAGTAGTTTTA AGTCCAGTTTCGGaattttttcgagaaaaatgCATGTTATCATGAATATT AGCGTACGAAAATGACTTGTTGCTTGGTAAGACTTAACACATAGCCATTG TAATCgtattttgagcttttaaagtaAGAGCAAATAGttcttttcgaatg ttttaatgATCATTTTATTTCATCATCCCATTTTTTTCGTTATTCGGTCC TCTTAAACCTCTTTACTACACTGTCAAACTGGGTTTTCCGAACTTACTGT ATACGCGTAAAAGTTGTCTGCAGTAGGAGCAGAAATCATcaatctatatt tttatttcaaatctaGTACTCCTGAAGATACCGGCAAGGAAAATGCTATA AACCAACATAACAGCGATGTAACGGACAACCTTCaagaagaaaagaacaa atcaaCAAAAGAGAGATCGTCATCAGTGGAGAAAAACACACAGGAAGAAA AATCCAACAATGCCCACAACACAACAATGACAACAGACAGTTCATTTGCT TCTTCTTCCAACGACCACCAAACGGCATCATCTTCAACATCCTCCCTAAA CAATGTCAGGTAATGCCAATTCCTTTTTACACAGGGAAAGTATTTCTTTG TGTCCGAAACATGCTTTTTATaacgaaaaatttatttttgaaaaatagca gCGAGTTTGCTATAAATGTTTGATTacataaagtaaaaacaaatcttaag atgaataaaaaattattttacacgAGCCCCTTCTTCTCGAAATGGATGAG TTGATGATCATCTTCCTTCTTCTTGCAACATTGACAATATAAAAGACACG ATGTTAATAAGTTCCCAAACATCAACATCTCCatcagaaagaaaaataga agcaTACCAAAGTCTATAGAGGTCAGGTTTTCCAGACTTCTGTTTGATTC ATATGCACGAATGTATCTTACTCGCGATCTTGGTAAAAGAACGATACTTA TAAACAGGATGATCGCTGAGCGGTTGGCCAGTTGAAACGCATCGAAACCT AACTTGATGGAAAGAAATGCTgtgctttttttgaaaactgcAATGTACCC TAAGGTGATATTGATGATTAAAGATAAATGTGTCCATGCTGGGAATGTGT TGTATGTTTGCAAGAACACGCCAATCATATCATCTTTGAATTTTCCTCCG AATCCATAATAAAGTGATCTTGCCATTATTGTCATAAAAACGAATACCAT CAGTAAATGTGTCAATACACGTTGTCTTTTCCATATTTTAAGTTCCTCAG TGTTTGAAAACCGTTTGTCCATTTTTACGGTGAGATTGGAATATTTTATA CTTCCTCCTTTCCTTTATTGATTGTTGTTCGCCTTATTGTTAACTGCTTA TTGGAAACCTTAACTCACTACGTCGAAATTAAAAGTTGGAGGATGGTAAC CATTGTTGAACaagtcattaaaaaataatgCGATTCATTAATTCCGTTTA CATCGTTTTCAACATGATCATGTCTCTTCTATTTTTTACAAGAAGTAGAC CAGCTAAATTTCTTTAACACAACTGCACAATATCTCAAGAAGCATTCTCC TCAATAAAAATAACGTATATGTCTGATAACATACAAAACGAATTGTACGT TTAACTTCACACGATAaccaaaaatattacaaaaccGTAAACCGATTAGA TGTTATCAAAGAAAATGATACACGAAACTTTTACTCGCCAAATGATTGAA GTTAGGACTTCAGTGTTAACTCATACTCATAAAAGACTCAATGGAGGTCG GTCAAAATAAACAAGGAGGTGGGAAATTTCTGTGTATTGCACACATATGG TGCTTCTTGGATTGTAATGTTTATGAAAGTAGACGCACTATCTTTTTTAG ATCTTCCAGTAATGCTAGTGGAGAGAAAGATTAGCGTTATTTTAAACTGC AAACCACGATAGTGAAATGATTCTAAGAAAAAACTTACAACTCACAACCT CAGCTTTCTAAAAGATTTGGCTGAGGTGGTTTTGAGCTATGACCTGTTTA CAGTGGgatgaaattgaattattttgggtactttaatgggataaactttc gcggggattaaatttcgtggatttcgaggaaaatccgcgaaattaagtcc caatggaaatttggaagggcctcatccgcgaattatttctcaataaaact caaaatatgtcaaataaatactattttgaatggttacttgcatcaaagaa gcgctaataatgtgtacttcaacaaccaacatgcatgttttttgacagta aaagtaacaaaatcgtgaaaataatgccacccaatagtgccacccgcgaa atttttgaatttcgcggataagcccaaccgcgaaagtttatcccattaaa gtataatttTACGTCCGTAGGCGTCAAAGGGTTAAATATTGAGTTCTTCT CTTTTGTAGCCTGGATGAGATGATCGATTTGAAAGGAAAGACTTGGGATG ATTGGTTCCTGGAGAAAGCCATGCTTGAGATGAAGAGAATCAAACTGATC AACGTCAAGAAGAAAGAGTTGGACAAGAAACGTTCACAAGAACGAGAAGA GAAGATGAAGAAAGAAATGCAAGCAGCAGAAAATCGTCAAGATTGGATGa agaggaaaaagttccaagcTGAAAAACAACGGTGTGAAGAACTCGctcaa aaagaatttcaaagatTAAAGGTATGTAAATGTTCAAATGCCAATTATGG AGAGGACTGTCTGCTTATCTGTTTAATATGAATAGATAAACTAAACCTTA GCCATTTGCTTTATATAACCTTCCCCACAGCTGTTAGTACGGCATGGAGT AAACCTTTCTGAGACAACACCCACTAGTACTAGTGTCGCCTTACTAAACA CTTGATGAAGGGAAAAATATAAACTTACTATCCttgaaacttttattttt tgatatagGAAAAGCAAGAGAAGGACTTACTGGAGGAAAAAGCCAAACAG AATTACGATGAATGGTACGAGAAAAAGAAAGCTCAAGAAAAAGAAACACG TTTACGAAAGAAACACGAGAGAAATTTGGAAGAAGAGAGAACTCAAGAGA AGCAGCAGCAAGCGGACGATGCTTACAAACGATGGCTGTCGCAAACTGAC GAGCAAAGTAAACCTTTCAGATATCATGGAGGAGGACGTGTgtccaaaaa gaaaaacctttACTCGTCTCCTGATCCGACCTTCACGAACCCTTTACCAT GGGTGGATAGTGTGATGGAGGAGGAGAAAATGTACAGGTGTAATCaccaa aagaaaatcttctcaTCACCTCCAATGTTGTGGCAAGATATTGAAAACCG CCGCAAACGAACTTCTGATAACAGGTTGAGGAAAACTTCGGTCACGTGAT AAAAAGATGCTCTGGCATTTCGAAATgcactttttaaaatatttttctat cttCCTCCTTAACTTAAGAATCctacaatttttatattttacctaGTATT AAGTTAGAATAATATCAACCTTAAATATGatatgttttgaaatattttac atCGTTCGTTTATTTTCCTAACACTATTCATGGTCTACCAGGTCACGTGT CATTTAATTATTTCCCCTCCttcatttataaaaaatgatgCCAAACTGTT CAAATTCATTTAATATTCTACATCTCAACAGTTTTGAGCTCATCCATTTA ACATCGCCTTATCAACTATTATTGTCATTCCATTTTAAATTTCGATAATG TCTTTGATGTCGGAACTTTCAATGATTTTGATTCCATTTcgcttttcttt tgttttcatacCTTCGATGCTTTCATCGCAAACACCACGACATGCATCTT CGATGACGAAGGTTTGAAAACCATGAGTGTTACTATCGAAAGCTGTGTAT GCTACACAAAAGTCCGTCGCAAGTCCACACACAAAAACATGGGTGATTTT ACGATCGATGAATTCTTGGAATAGAATTGTTTGTGTCGAGCGTCCGTTAT CCCAGAATGCACTGTAACTGTCGATCTGAGGGTGTGTTCCTTTTAAGATG CGAATCGAATCTTCTTTTACCTGTGTgtgaaataaagataaaattgTGGC AACCAATACAAAAGAATACTTTGAGTTTCTAAGAAATGATGTACTAAAAA GAACGAAGTTTAGAATCAACACATATTTAAAAGACTTTTTAACGTTCTTA CATTTAGTTCTGAATGCAGTTCAGCTCCCTCTGACTCTTGTATGCAATGT GGAGGCCATAGGACTTGTTCGATTGGTTTGTGACCGTCGTACACCACCTT ATCCAACACTTTCGCTTCTTCTGCGGAGACGGTGGAACTTTCATGAAGAG GGTATTTAGAGACGTTTGTGTAGAAAGAACAATGGTCTTCAGGATGCCAA TCAGTGGTGTAAACAACAGCATCAAAAGGATGTTCTTCCAAGATGTTGTT CACCACTTCCACTATTTCTTCCCCATCTTGATTTGCTGGTGAATTTTTCA ACGCTAACGATCCAGAGATGAAATCATTCTGAACATCCACAACTAATAAC GCTGTCTTTTTCGAACAATCCCTCCTCAATAAATATCCCAACACTTTGGC CATCATCTCGAGGTCTACTTTCTTATCGAcctaaaatcaagaaaacaaac ttgGAACGAAAGTATGACTTCGTGATTTAAAGAATAGTGAGACAGGGGGT GGTTTAGATTCTCCCATCTCCACTAGTCAATGCTAACCATCAGGTCTATG GTGCAATGAAATGACTCACTGTGCATTCTTCGAAGAGATCGAGGACGTCT TGTTCTTGATTGGGATCCATCTTGATGTACTTGTCTCCACCAATCACCTC CAGGAACAAGTCATCCAAAGCACTTATCGGAATGTCCGCNTATGACCTGT TTACAGTGGgatgaaattgaattattttgggtactttaatgggataaact ttcgcggggattaaatttcgtggatttcgaggaaaatccgcgaaattaag tcccaatggaaatttggaagggcctcatccgcgaattatttctcaataaa actcaaaatatgtcaaataaatactattttgaatggttacttgcatcaaa gaagcgctaataatgtgtacttcaacaaccaacatgcatgttttttgaca gtaaaagtaacaaaatcgtgaaaataatgccacccaatagtgccacccgc gaaatttttgaatttcgcggataagcccaaccgcgaaagtttatcccatt aaagtataatttTACGTCCGTAGGCGTCAAAGGGTTAAATATTGAGTTCT TCTCTTTTGTAGCCTGGATGAGATGATCGATTTGAAAGGAAAGACTTGGG ATGATTGGTTCCTGGAGAAAGCCATGCTTGAGATGAAGAGAATCAAACTG ATCAACGTCAAGAAGAAAGAGTTGGACAAGAAACGTTCACAAGAACGAGA AGAGAAGATGAAGAAAGAAATGCAAGCAGCAGAAAATCGTCAAGATTGGA TGaagaggaaaaagttccaagcTGAAAAACAACGGTGTGAAGAACTCGct caaaaagaatttcaaagatTAAAGGTATGTAAATGTTCAAATGCCAATTA TGGAGAGGACTGTCTGCTTATCTGTTTAATATGAATAGATAAACTAAACC TTAGCCATTTGCTTTATATAACCTTCCCCACAGCTGTTAGTACGGCATGG AGTAAACCTTTCTGAGACAACACCCACTAGTACTAGTGTCGCCTTACTAA ACACTTGATGAAGGGAAAAATATAAACTTACTATCCttgaaacttttatt ttttgatatagGAAAAGCAAGAGAAGGACTTACTGGAGGAAAAAGCCAAA CAGAATTACGATGAATGGTACGAGAAAAAGAAAGCTCAAGAAAAAGAAAC ACGTTTACGAAAGAAACACGAGAGAAATTTGGAAGAAGAGAGAACTCAAG AGAAGCAGCAGCAAGCGGACGATGCTTACAAACGATGGCTGTCGCAAACT GACGAGCAAAGTAAACCTTTCAGATATCATGGAGGAGGACGTGTgtccaa aaagaaaaacctttACTCGTCTCCTGATCCGACCTTCACGAACCCTTTAC CATGGGTGGATAGTGTGATGGAGGAGGAGAAAATGTACAGGTGTAATCac caaaagaaaatcttctcaTCACCTCCAATGTTGTGGCAAGATATTGAAAA CCGCCGCAAACGAACTTCTGATAACAGGTTGAGGAAAACTTCGGTCACGT GATAAAAAGATGCTCTGGCATTTCGAAATgcactttttaaaatatttttc tatcttCCTCCTTAACTTAAGAATCctacaatttttatattttacctaGT ATTAAGTTAGAATAATATCAACCTTAAATATGatatgttttgaaatattt tacatCGTTCGTTTATTTTCCTAACACTATTCATGGTCTACCAGGTCACG TGTCATTTAATTATTTCCCCTCCttcatttataaaaaatgatgCCAAACT GTTCAAATTCATTTAATATTCTACATCTCAACAGTTTTGAGCTCATCCAT TTAACATCGCCTTATCAACTATTATTGTCATTCCATTTTAAATTTCGATA ATGTCTTTGATGTCGGAACTTTCAATGATTTTGATTCCATTTcgcttttc ttttgttttcatacCTTCGATGCTTTCATCGCAAACACCACGACATGCAT CTTCGATGACGAAGGTTTGAAAACCATGAGTGTTACTATCGAAAGCTGTG TATGCTACACAAAAGTCCGTCGCAAGTCCACACACAAAAACATGGGTGAT TTTACGATCGATGAATTCTTGGAATAGAATTGTTTGTGTCGAGCGTCCGT TATCCCAGAATGCACTGTAACTGTCGATCTGAGGGTGTGTTCCTTTTAAG ATGCGAATCGAATCTTCTTTTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021753TCONS_00021753Clytia hemisphaericatranscript
TCONS_00021754TCONS_00021754Clytia hemisphaericatranscript
TCONS_00021755TCONS_00021755Clytia hemisphaericatranscript
TCONS_00021756TCONS_00021756Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00021753-proteinTCONS_00021753-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000394supercontigsc0000394:204125..215296 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
19.51 18.86 13.75 13.83 40.24 30.84 25.43 24.41 18.07 19.24 17.03 17.24 11.41 10.35 9.19 10.96 25.71 32.67 7.7 7.84 10.96 10.52 18.85 17.97 26.11 23.72 5.69 4.08 8.13 9.34