TCONS_00021763 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021763
Unique NameTCONS_00021763
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2222

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021763 ID=TCONS_00021763|Name=TCONS_00021763|organism=Clytia hemisphaerica|type=transcript|length=2222bp
TTCagcacaaataaaaaaaaagcagaaaaataatTAACCAATGAAACCAC
AATGAGGAGCAAAAGATCAAACAAAGTGCAATCATTATGTAAACATCATC
TAGATTTCAAACCCAACCCGTCACCAACATCTTCCACAGAGAAGTCTGGT
CTGTTGAGAGTACACGTCATGAAGGCTTCTGTTCACTCCCAGCATCAAAA
ACTTATGAACAATTTGAAGAAATCTTGTCGTGAAAGCGAAAATTTCGGTC
CCAATTCTTTGGTCAAACAATTACAGTCACTTGGCAAAATGTTTGCTCCT
CCCAAAAATTCTGATCTTTCTCAGATAAATGAAACACCAGCACCGCAACC
AGCTATGAAAAGAGACCAACCGTCAGAGAGAGAATTGATCGAATCTTTAA
ATTATGTTTTACCCATCGAAAAGTTCAatcatttcaaaatattgctaccC
AAGTCGAAGCTTCACGTCACAACGCCTGACGGTGAGGAAGTGATCGTGGA
GCCGTGTGACAAACACACCAAAGTCAAAGCGACGCACGAAACACACGAAG
GCCTTATGAAGCGCCACAAAACGACCAAAGATGTCCTCCAACTTTTTTCT
AAACAGAAATCGCGTCAATTGAACGCAAACAACTGGCGAAAAGACGATTC
ATTCTTCATTTATGTGTTCGAGAACAAAAAGTTCTTATTCGATAAATCAA
CCGGTGAAATCTCGTGTTTTCCAACGCCTGACGCAATGAAGCCAAAACCA
TCGAACAAAAGCAAAGGGGAGCCACCTCAGCTTGAACGAAATATTGTGGG
CAAATCGTTTGGAACATTTATAAATGACTTTTGCAAGAAGCCTGTGGAAG
GGAAAGAATACCCTTCAACCAATCAATTTAACGTTCGAAGCAATCACAAT
ATACAATTGCACGTGCTGCAACCTGTAGAACAGAAAGCAAACTTCCGATT
CGTCATTCATTCTTCTCCTTTTGGTTCGTTCATTGAGAGAGCCGGTACTT
CTCATATCGCAAcAGGAAATCGAAAACAAACAGCCAGGAAGAATAACAGA
GATTACAAGGATCGTGAAGAAGAAAAGTTAATCGAGCTGATAGAGCAAAT
ACCTAATCAGTATCTACCAGACAAAAAACAGCGTAATAAGtatTCTATTG
TTCGTGGTTCGATTGATTACATAAAGAATCTGGAACGAAAAGTTCGAGAA
CAACTTGGTATTCCACAAGTTGAAGCATCAGAGGACCCTTTGGATGTCAT
AGAAACAGCTCAACCAACGGATCACTCCCAACACCCGATGGAACTTTCTG
CTTCACAAGAAGACCACGAAGACATCACCGAGTACGAAGAGGAGGAAGTG
TATGATAACgctttcgaagatttctttcaaCTCCTCTGCAATCCCATCTC
CTCAACCAGAACAACAAACCATGGTGACAATGAGGGAAATCAAACGACCA
CCATTCAATTTCCCTCTAAAGAAGAATGCTCTCTCTTCCAGTCCCTCTCT
GCTATGGAACAGAATTTACTACGAGCAAGTCAAGAGGATGAACAGTTGGA
TCGATTTGTAAGTATCGAAGAACGATTCCAATTGAACTATAGTGACGTCA
ATCTGAACAGTTTACAAGGGGAATATGTtatcaatgatgaaaatgaaagt
gaggTTCAGGACGAAGTAATGTATTCTGCAGAACAACCCAACATCATGAA
TTCACCTATCTCCAAAGACACTGATCGTGTTTTCCAATCACCAATCGCTC
GAAATAATGAAATGCAATTATAAGACGTTGAGATGCTGATGATGTTTATT
TGTTACTGTTGAACTCCTGTTAACTTATTTTATTAGTCCTGTTTTAGTTT
ATGAATGTTTGAACTGTTACTACCTGGtctgtttcattttaaatacTTTA
GTCTGTCGAAACTTGCTCCCTTTTACCTAgcatatttttttatgatagga
ttttaccaaatttctattttttgtcCATATGTAGAAATAAGAATATTGAA
AAAAGTAAATCGATCTCATCGAAATTGTCAATCCAAATATTTCAAGTTTT
AAAGCTTAATCAATCCAATTTCTTTTGAATGTATCATCTCGTCCCAACAT
CCTCTTTTCCAgggttcaaaataaaaaaaatgagataCAAAGTAAAAACT
TTTCAACAAAAGGAATCGGTAGATTGGAAAAACTGAATGATGCACATATT
GAGGTGAGTAAAAGATTCTCCC
Run BLAST on NCBI

protein sequence of TCONS_00021763-protein

>TCONS_00021763-protein ID=TCONS_00021763-protein|Name=TCONS_00021763-protein|organism=Clytia hemisphaerica|type=polypeptide|length=573bp
MRSKRSNKVQSLCKHHLDFKPNPSPTSSTEKSGLLRVHVMKASVHSQHQK
LMNNLKKSCRESENFGPNSLVKQLQSLGKMFAPPKNSDLSQINETPAPQP
AMKRDQPSERELIESLNYVLPIEKFNHFKILLPKSKLHVTTPDGEEVIVE
PCDKHTKVKATHETHEGLMKRHKTTKDVLQLFSKQKSRQLNANNWRKDDS
FFIYVFENKKFLFDKSTGEISCFPTPDAMKPKPSNKSKGEPPQLERNIVG
KSFGTFINDFCKKPVEGKEYPSTNQFNVRSNHNIQLHVLQPVEQKANFRF
VIHSSPFGSFIERAGTSHIATGNRKQTARKNNRDYKDREEEKLIELIEQI
PNQYLPDKKQRNKYSIVRGSIDYIKNLERKVREQLGIPQVEASEDPLDVI
ETAQPTDHSQHPMELSASQEDHEDITEYEEEEVYDNAFEDFFQLLCNPIS
STRTTNHGDNEGNQTTTIQFPSKEECSLFQSLSAMEQNLLRASQEDEQLD
RFVSIEERFQLNYSDVNLNSLQGEYVINDENESEVQDEVMYSAEQPNIMN
SPISKDTDRVFQSPIARNNEMQL
Run BLAST on NCBI

transcript from alignment at sc0000394:258353..263313+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021763 ID=TCONS_00021763|Name=TCONS_00021763|organism=Clytia hemisphaerica|type=transcript|length=4961bp|location=Sequence derived from alignment at sc0000394:258353..263313+ (Clytia hemisphaerica)
TTCagcacaaataaaaaaaaagcagaaaaataatTAACCAATGAAACCAC
AATGAGGAGCAAAAGATCAAACAAAGTGCAATCATTATGTAAACATCATC
TAGATTTCAAACCCAACCCGTCACCAACATCTTCCACAGAGAAGTCTGGT
CTGTTGAGAGTACACGTCATGAAGGCTTCTGTTCACTCCCAGCATCAAAA
ACTTATGAACAATTTGAAGAAATCTTGTCGTGAAAGCGAAAATTTCGGTC
CCAATTCTTTGGTCAAACAATTACAGTCACTTGGCAAAATGTTTGCTCCT
CCCAAAAATTCTGATCTTTCTCAGATAAATGGTATGTTTATTCATTCGTA
TTTAGTTCTGTGTCTGTACTTGTAGTGAAATCCTTAAAATCAACTCCACT
CTACACCATTTGAAGAAAGGATGTAAGTAAAGTAAATGGTATCATTCAGA
CAAATCACTTTTTTTCAGAAACACCAGCACCGCAACCAGCTATGAAAAGA
GACCAACCGTCAGAGAGAGAATTGATCGAATCTTTAAATTATGTTTTACC
CATCGAAAAGTTCAatcatttcaaaatattgctaccCAAGTCGAAGCTTC
ACGTCACAACGCCTGACGGTGAGGAAGTGATCGTGGAGCCGTGTGACAAA
CACACCAAAGTCAAAGCGACGCACGAAACACACGAAGGCCTTATGAAGCG
CCACAAAACGACCAAAGATGTCCTCCAACTTTTTTCTAAACAGAAATCGC
GTCAATTGAACGCAAACAACTGGCGAAAAGACGATTCATTCTTCATTTAT
GTGTTCGAGAACAAAAAGTTCTTATTCGATAAATCAACCGGTGAAATCTC
GTGTTTTCCAACGCCTGACGCAATGAAGCCAAAACCATCGAACAAAAGCA
AAGGGGAGCCACCTCAGCTTGAACGAAATATTGTGGGCAAATCGTTTGGA
ACATTTATAAATGACTTTTGCAAGAAGCCTGTGGAAGGGAAAGAATACCC
TTCAACCAATCAATTTAACGTTCGAAGCAATCACAATATACAATTGCACG
TGCTGCAACCTGTAGAACAGAAAGCAAACTTCCGATTCGTCATTCATTCT
TCTCCTTTTGGTTCGTTCATTGAGAGAGCCGGTACTTCTCATATCGCAAG
TATGTTATCTTTTTGTTTGAACATCGAATATCCTGACGTGGATTAATAAT
TTTTATACTCTACTATATTGTACAATCATTGACAAAACCTATGGTACAAA
GCCCACAAATGAGTTCCCTATCCCCTCCCCCCCCCTAAACAATGTTGTTG
GAGGGGGAGGTTATTGCCCTGTGTCTAAATTTGACCGCCCAGAAATGTGC
CATGATATATTGGCAACGATTGTAGTTTGAAAGATAGGAAATGAAATATT
ATTAAAAGGCAATCACCACATGGGGAACCCGATATCAGTACAAGCTAatc
acttttttctttcagcAGGAAATCGAAAACAAACAGCCAGGAAGAATAAC
AGGTGCTATACATAATTCTTTCTGTGTTACCCAAATTCTCGAAAGAATCT
ATTATTGTGTGAAGTTGACTCTAAATCGTCTTTTCGAACATGGAAATTCA
GACAGCCCAGTAATGAGAactgttttcttcttctttccacAGAGATTACA
AGGATCGTGAAGAAGAAAAGTTAATCGAGCTGATAGAGCAAATACCTAAT
CAGTATCTACCAGACAAAAAACAGCGTAATAAGGTTCAGATTGAAGCAAG
CTTGTTTAACAATTTATTTCAGTTTTTGTCTAAAAACTCAACTAGTGTTG
TATCAGTTCATTTATCAGTTACTTAGTCAGCTCAGAAAATTTTCATATGA
CCCTGATGCATGTCCTAaacaatttcatgtttttttttttttcagtattC
TATTGTTCGTGGTTCGATTGATTACATAAAGGATCTGGAACGAAAAGTTC
GAGGTTAGTAACTTATTTAGAGGAGTGACATGGTATTTTTCAGTCgtgtt
gatttaaaaaaaagtcatattCCGTAAGgttttccttcgaaaatacaaag
gatggttttccttcgaaaatacaCATCAaggttttccttcaaaaatacaa
aggatggttttccttcgaaaatacaTATCAaggttttccttcaaaaatac
aaagaaaggttttttttcgaaaatacaaaggatggttttccttcaaaaat
acaaagcaaggttttccttcgaaaatacaAAGCAaggttttccttcaaaa
atacaatgaaaggtttttttcgaaaatagaaATCAAGgttttccttcgaa
aatacaAAGCAAGgttttccttcgaaaatacaAAGCAGCGTTTTCCTTCG
AAGATTACTGAACGAAAAACGAAAAAGTGAAATGATTATCCTCCTTAGAA
CAACTTGGTATTCCACAAGCATCAGAGGACCCTTTGGATGTCATAGAAAT
AGCTCAACCAACGGATCACTCCCAACACCCGATGGAACTTTCTGCTTCAC
AAGAAGACCACGAAGAGTGAGCTCAAATTCCTTTTCTTAACGNGAACATC
GAATATCCTGACGTGGATTAATAATTTTTATACTCTACTATATTGTACAA
TCATTGACAAAACCTATGGTACAAAGCCCACAAATGAGTTCCCTATCCCC
TCCCCCCCCCTAAACAATGTTGTTGGAGGGGGAGGTTATTGCCCTGTGTC
TAAATTTGACCGCCCAGAAATGTGCCATGATATATTGGCAACGATTGTAG
TTTGAAAGATAGGAAATGAAATATTATTAAAAGGCAATCACCACATGGGG
AACCCGATATCAGTACAAGCTAatcacttttttctttcagcAGGAAATCG
AAAACAAACAGCCAGGAAGAATAACAGGTGCTATACATAATTCTTTCTGT
GTTACCCAAATTCTCGAAAGAATCTATTATTGTGTGAAGTTGACTCTAAA
TCGTCTTTTCGAACATGGAAATTCAGACAGCCCAGTAATGAGAactgttt
tcttcttctttccacAGAGATTACAAGGATCGTGAAGAAGAAAAGTTAAT
CGAGCTGATAGAGCAAATACCTAATCAGTATCTACCAGACAAAAAACAGC
GTAATAAGGTTCAGATTGAAGCAAGCTTGTTTAACAATTTATTTCAGTTT
TTGTCTAAAAACTCAACTAGTGTTGTATCAGTTCATTTATCAGTTACTTA
GTCAGCTCAGAAAATTTTCATATGACCCTGATGCATGTCCTAaacaattt
catgtttttttttatttcagtatTCTATTGTTCGTGGTTCGATTGATTAC
ATAAAGAATCTGGAACGAAAAGTTCGAGGTTAGTAACTTATTTAGAGGAG
TGACATGGTATTTTTCAGTCgtgttgatttaaaaaaaagtcatattCCGT
AAGGTTTTCCTTCGAAAAGGACAAAGGAtggttttccttcaaaaatacaa
aggatggttttccttcaaaaatacaaatcaaggttttccttcaaaaatac
aaagaaaggttttttttcgaaaatacaaaggatggttttccttcgaaaat
acaAAGCAAGgttttccttcgaaaatacaAAGCAAGgttttccttcgaaa
atacaAAGCAaggttttccttcaaaaatacaaagaaaggtttttttcgaa
aatagaaATCAAGgttttccttcgaaaatacaAAGCAAGGTTTTCCTTCG
AAATTACAAAGCAGCGTTTTCCTTCGAAGATTACtgaatgaaaaacgaaa
aagcgAAATGATTATCCTCCTTAGAACAACTTGGTATTCCACAAGTTGAA
GCATCAGAGGACCCTTTGGATGTCATAGAAACAGCTCAACCAACGGATCA
CTCCCAACACCCGATGGAACTTTCTGCTTCACAAGAAGACCACGAAGAGT
GAGCTCAAATTCCTTTTCTTAACGTTATACATACTTTTAATAgtgatttg
ttttattttcaaaattatcagtgttttcattttgaaagtAACTTTTCAAT
CGTTTTGAACTTTCTCTGATTATATTTGTTGTGATAGTTTCTGCCCACAT
CTCATTTTCAGCATCACCGAGTACGAAGAGGAGGAAGTGTATGATAACgc
tttcgaagatttctttcaaCTCCTCTGCAATCCCATCTCCTCAACCAGAA
CAACAAACCATGGTGACAATGAGGGAAATCAAACGACCACCATTCAATTT
CCCTCTAAAGAAGAATGCTCTCTCTTCCAGTCCCTCTCTGCTATGGAACA
GAATTTACTACGAGCAAGTCAAGAGGATGAACAGTTGGATCGATTTGTAA
GTATCGAAGAACGATTCCAATTGAACTATAGTGACGTCAATCTGAACAGT
TTACAAGGGGAATATGTtatcaatgatgaaaatgaaagtgaggTTCAGGA
CGAAGTAATGTATTCTGCAGAACAACCCAACATCATGAATTCACCTATCT
CCAAAGACACTGATCGTGTTTTCCAATCACCAATCGCTCGAAATAATGAA
ATGCAATTATAAGACGTTGAGATGCTGATGATGTTTATTTGTTACTGTTG
AACTCCTGTTAACTTATTTTATTAGTCCTGTTTTAGTTTATGAATGTTTG
AACTGTTACTACCTGGtctgtttcattttaaatacTTTAGTCTGTCGAAA
CTTGCTCCCTTTTACCTAgcatatttttttatgataggattttaccaaat
ttctattttttgtcCATATGTAGAAATAAGAATATTGAAAAAAGTAAATC
GATCTCATCGAAATTGTCAATCCAAATATTTCAAGTTTTAAAGCTTAATC
AATCCAATTTCTTTTGAATGTATCATCTCGTCCCAACATCCTCTTTTCCA
gggttcaaaataaaaaaaatgagataCAAAGTAAAAACTTTTCAACAAAA
GGAATCGGTAGATTGGAAAAACTGAATGATGCACATATTGAGGTGAGTAA
AAGATTCTCCC

Coding sequence (CDS) from alignment at sc0000394:258353..263313+

>TCONS_00021763 ID=TCONS_00021763|Name=TCONS_00021763|organism=Clytia hemisphaerica|type=CDS|length=12054bp|location=Sequence derived from alignment at sc0000394:258353..263313+ (Clytia hemisphaerica)
ATGAGGAGCAAAAGATCAAACAAAGTGCAATCATTATGTAAACATCATCT
AGATTTCAAACCCAACCCGTCACCAACATCTTCCACAGAGAAGTCTGGTC
TGTTGAGAGTACACGTCATGAAGGCTTCTGTTCACTCCCAGCATCAAAAA
CTTATGAACAATTTGAAGAAATCTTGTCGTGAAAGCGAAAATTTCGGTCC
CAATTCTTTGGTCAAACAATTACAGTCACTTGGCAAAATGTTTGCTCCTC
CCAAAAATTCTGATCTTTCTCAGATAAATGAAACACCAGCACCGCAACCA
GCTATGAAAAGAGACCAACCGTCAGAGAGAGAATTGATCGAATCTTTAAA
TTATGTTTTACCCATCGAAAAGTTCAatcatttcaaaatattgctaccCA
AGTCGAAGCTTCACGTCACAACGCCTGACGGTGAGGAAGTGATCGTGGAG
CCGTGTGACAAACACACCAAAGTCAAAGCGACGCACGAAACACACGAAGG
CCTTATGAAGCGCCACAAAACGACCAAAGATGTCCTCCAACTTTTTTCTA
AACAGAAATCGCGTCAATTGAACGCAAACAACTGGCGAAAAGACGATTCA
TTCTTCATTTATGTGTTCGAGAACAAAAAGTTCTTATTCGATAAATCAAC
CGGTGAAATCTCGTGTTTTCCAACGCCTGACGCAATGAAGCCAAAACCAT
CGAACAAAAGCAAAGGGGAGCCACCTCAGCTTGAACGAAATATTGTGGGC
AAATCGTTTGGAACATTTATAAATGACTTTTGCAAGAAGCCTGTGGAAGG
GAAAGAATACCCTTCAACCAATCAATTTAACGTTCGAAGCAATCACAATA
TACAATTGCACGTGCTGCAACCTGTAGAACAGAAAGCAAACTTCCGATTC
GTCATTCATTCTTCTCCTTTTGGTTCGTTCATTGAGAGAGCCGGTACTTC
TCATATCGCAAcAGGAAATCGAAAACAAACAGCCAGGAAGAATAACAGAG
ATTACAAGGATCGTGAAGAAGAAAAGTTAATCGAGCTGATAGAGCAAATA
CCTAATCAGTATCTACCAGACAAAAAACAGCGTAATAAGtatTCTATTGT
TCGTGGTTCGATTGATTACATAAAGAATCTGGAACGAAAAGTTCGAGAAC
AACTTGGTATTCCACAAGTTGAAGCATCAGAGGACCCTTTGGATGTCATA
GAAACAGCTCAACCAACGGATCACTCCCAACACCCGATGGAACTTTCTGC
TTCACAAGAAGACCACGAAGACATCACCGAGTACGAAGAGGAGGAAGTGT
ATGATAACgctttcgaagatttctttcaaCTCCTCTGCAATCCCATCTCC
TCAACCAGAACAACAAACCATGGTGACAATGAGGGAAATCAAACGACCAC
CATTCAATTTCCCTCTAAAGAAGAATGCTCTCTCTTCCAGTCCCTCTCTG
CTATGGAACAGAATTTACTACGAGCAAGTCAAGAGGATGAACAGTTGGAT
CGATTTGTAAGTATCGAAGAACGATTCCAATTGAACTATAGTGACGTCAA
TCTGAACAGTTTACAAGGGGAATATGTtatcaatgatgaaaatgaaagtg
aggTTCAGGACGAAGTAATGTATTCTGCAGAACAACCCAACATCATGAAT
TCACCTATCTCCAAAGACACTGATCGTGTTTTCCAATCACCAATCGCTCG
AAATAATGAAATGCAATTATAAATGAGGAGCAAAAGATCAAACAAAGTGC
AATCATTATGTAAACATCATCTAGATTTCAAACCCAACCCGTCACCAACA
TCTTCCACAGAGAAGTCTGGTCTGTTGAGAGTACACGTCATGAAGGCTTC
TGTTCACTCCCAGCATCAAAAACTTATGAACAATTTGAAGAAATCTTGTC
GTGAAAGCGAAAATTTCGGTCCCAATTCTTTGGTCAAACAATTACAGTCA
CTTGGCAAAATGTTTGCTCCTCCCAAAAATTCTGATCTTTCTCAGATAAA
TGAAACACCAGCACCGCAACCAGCTATGAAAAGAGACCAACCGTCAGAGA
GAGAATTGATCGAATCTTTAAATTATGTTTTACCCATCGAAAAGTTCAat
catttcaaaatattgctaccCAAGTCGAAGCTTCACGTCACAACGCCTGA
CGGTGAGGAAGTGATCGTGGAGCCGTGTGACAAACACACCAAAGTCAAAG
CGACGCACGAAACACACGAAGGCCTTATGAAGCGCCACAAAACGACCAAA
GATGTCCTCCAACTTTTTTCTAAACAGAAATCGCGTCAATTGAACGCAAA
CAACTGGCGAAAAGACGATTCATTCTTCATTTATGTGTTCGAGAACAAAA
AGTTCTTATTCGATAAATCAACCGGTGAAATCTCGTGTTTTCCAACGCCT
GACGCAATGAAGCCAAAACCATCGAACAAAAGCAAAGGGGAGCCACCTCA
GCTTGAACGAAATATTGTGGGCAAATCGTTTGGAACATTTATAAATGACT
TTTGCAAGAAGCCTGTGGAAGGGAAAGAATACCCTTCAACCAATCAATTT
AACGTTCGAAGCAATCACAATATACAATTGCACGTGCTGCAACCTGTAGA
ACAGAAAGCAAACTTCCGATTCGTCATTCATTCTTCTCCTTTTGGTTCGT
TCATTGAGAGAGCCGGTACTTCTCATATCGCAAcAGGAAATCGAAAACAA
ACAGCCAGGAAGAATAACAGAGATTACAAGGATCGTGAAGAAGAAAAGTT
AATCGAGCTGATAGAGCAAATACCTAATCAGTATCTACCAGACAAAAAAC
AGCGTAATAAGtatTCTATTGTTCGTGGTTCGATTGATTACATAAAGAAT
CTGGAACGAAAAGTTCGAGAACAACTTGGTATTCCACAAGTTGAAGCATC
AGAGGACCCTTTGGATGTCATAGAAACAGCTCAACCAACGGATCACTCCC
AACACCCGATGGAACTTTCTGCTTCACAAGAAGACCACGAAGACATCACC
GAGTACGAAGAGGAGGAAGTGTATGATAACgctttcgaagatttctttca
aCTCCTCTGCAATCCCATCTCCTCAACCAGAACAACAAACCATGGTGACA
ATGAGGGAAATCAAACGACCACCATTCAATTTCCCTCTAAAGAAGAATGC
TCTCTCTTCCAGTCCCTCTCTGCTATGGAACAGAATTTACTACGAGCAAG
TCAAGAGGATGAACAGTTGGATCGATTTGTAAGTATCGAAGAACGATTCC
AATTGAACTATAGTGACGTCAATCTGAACAGTTTACAAGGGGAATATGTt
atcaatgatgaaaatgaaagtgaggTTCAGGACGAAGTAATGTATTCTGC
AGAACAACCCAACATCATGAATTCACCTATCTCCAAAGACACTGATCGTG
TTTTCCAATCACCAATCGCTCGAAATAATGAAATGCAATTATAAATGAGG
AGCAAAAGATCAAACAAAGTGCAATCATTATGTAAACATCATCTAGATTT
CAAACCCAACCCGTCACCAACATCTTCCACAGAGAAGTCTGGTCTGTTGA
GAGTACACGTCATGAAGGCTTCTGTTCACTCCCAGCATCAAAAACTTATG
AACAATTTGAAGAAATCTTGTCGTGAAAGCGAAAATTTCGGTCCCAATTC
TTTGGTCAAACAATTACAGTCACTTGGCAAAATGTTTGCTCCTCCCAAAA
ATTCTGATCTTTCTCAGATAAATGAAACACCAGCACCGCAACCAGCTATG
AAAAGAGACCAACCGTCAGAGAGAGAATTGATCGAATCTTTAAATTATGT
TTTACCCATCGAAAAGTTCAatcatttcaaaatattgctaccCAAGTCGA
AGCTTCACGTCACAACGCCTGACGGTGAGGAAGTGATCGTGGAGCCGTGT
GACAAACACACCAAAGTCAAAGCGACGCACGAAACACACGAAGGCCTTAT
GAAGCGCCACAAAACGACCAAAGATGTCCTCCAACTTTTTTCTAAACAGA
AATCGCGTCAATTGAACGCAAACAACTGGCGAAAAGACGATTCATTCTTC
ATTTATGTGTTCGAGAACAAAAAGTTCTTATTCGATAAATCAACCGGTGA
AATCTCGTGTTTTCCAACGCCTGACGCAATGAAGCCAAAACCATCGAACA
AAAGCAAAGGGGAGCCACCTCAGCTTGAACGAAATATTGTGGGCAAATCG
TTTGGAACATTTATAAATGACTTTTGCAAGAAGCCTGTGGAAGGGAAAGA
ATACCCTTCAACCAATCAATTTAACGTTCGAAGCAATCACAATATACAAT
TGCACGTGCTGCAACCTGTAGAACAGAAAGCAAACTTCCGATTCGTCATT
CATTCTTCTCCTTTTGGTTCGTTCATTGAGAGAGCCGGTACTTCTCATAT
CGCAAcAGGAAATCGAAAACAAACAGCCAGGAAGAATAACAGAGATTACA
AGGATCGTGAAGAAGAAAAGTTAATCGAGCTGATAGAGCAAATACCTAAT
CAGTATCTACCAGACAAAAAACAGCGTAATAAGtatTCTATTGTTCGTGG
TTCGATTGATTACATAAAGAATCTGGAACGAAAAGTTCGAGAACAACTTG
GTATTCCACAAGTTGAAGCATCAGAGGACCCTTTGGATGTCATAGAAACA
GCTCAACCAACGGATCACTCCCAACACCCGATGGAACTTTCTGCTTCACA
AGAAGACCACGAAGACATCACCGAGTACGAAGAGGAGGAAGTGTATGATA
ACgctttcgaagatttctttcaaCTCCTCTGCAATCCCATCTCCTCAACC
AGAACAACAAACCATGGTGACAATGAGGGAAATCAAACGACCACCATTCA
ATTTCCCTCTAAAGAAGAATGCTCTCTCTTCCAGTCCCTCTCTGCTATGG
AACAGAATTTACTACGAGCAAGTCAAGAGGATGAACAGTTGGATCGATTT
GTAAGTATCGAAGAACGATTCCAATTGAACTATAGTGACGTCAATCTGAA
CAGTTTACAAGGGGAATATGTtatcaatgatgaaaatgaaagtgaggTTC
AGGACGAAGTAATGTATTCTGCAGAACAACCCAACATCATGAATTCACCT
ATCTCCAAAGACACTGATCGTGTTTTCCAATCACCAATCGCTCGAAATAA
TGAAATGCAATTATAAATGAGGAGCAAAAGATCAAACAAAGTGCAATCAT
TATGTAAACATCATCTAGATTTCAAACCCAACCCGTCACCAACATCTTCC
ACAGAGAAGTCTGGTCTGTTGAGAGTACACGTCATGAAGGCTTCTGTTCA
CTCCCAGCATCAAAAACTTATGAACAATTTGAAGAAATCTTGTCGTGAAA
GCGAAAATTTCGGTCCCAATTCTTTGGTCAAACAATTACAGTCACTTGGC
AAAATGTTTGCTCCTCCCAAAAATTCTGATCTTTCTCAGATAAATGAAAC
ACCAGCACCGCAACCAGCTATGAAAAGAGACCAACCGTCAGAGAGAGAAT
TGATCGAATCTTTAAATTATGTTTTACCCATCGAAAAGTTCAatcatttc
aaaatattgctaccCAAGTCGAAGCTTCACGTCACAACGCCTGACGGTGA
GGAAGTGATCGTGGAGCCGTGTGACAAACACACCAAAGTCAAAGCGACGC
ACGAAACACACGAAGGCCTTATGAAGCGCCACAAAACGACCAAAGATGTC
CTCCAACTTTTTTCTAAACAGAAATCGCGTCAATTGAACGCAAACAACTG
GCGAAAAGACGATTCATTCTTCATTTATGTGTTCGAGAACAAAAAGTTCT
TATTCGATAAATCAACCGGTGAAATCTCGTGTTTTCCAACGCCTGACGCA
ATGAAGCCAAAACCATCGAACAAAAGCAAAGGGGAGCCACCTCAGCTTGA
ACGAAATATTGTGGGCAAATCGTTTGGAACATTTATAAATGACTTTTGCA
AGAAGCCTGTGGAAGGGAAAGAATACCCTTCAACCAATCAATTTAACGTT
CGAAGCAATCACAATATACAATTGCACGTGCTGCAACCTGTAGAACAGAA
AGCAAACTTCCGATTCGTCATTCATTCTTCTCCTTTTGGTTCGTTCATTG
AGAGAGCCGGTACTTCTCATATCGCAAcAGGAAATCGAAAACAAACAGCC
AGGAAGAATAACAGAGATTACAAGGATCGTGAAGAAGAAAAGTTAATCGA
GCTGATAGAGCAAATACCTAATCAGTATCTACCAGACAAAAAACAGCGTA
ATAAGtatTCTATTGTTCGTGGTTCGATTGATTACATAAAGAATCTGGAA
CGAAAAGTTCGAGAACAACTTGGTATTCCACAAGTTGAAGCATCAGAGGA
CCCTTTGGATGTCATAGAAACAGCTCAACCAACGGATCACTCCCAACACC
CGATGGAACTTTCTGCTTCACAAGAAGACCACGAAGACATCACCGAGTAC
GAAGAGGAGGAAGTGTATGATAACgctttcgaagatttctttcaaCTCCT
CTGCAATCCCATCTCCTCAACCAGAACAACAAACCATGGTGACAATGAGG
GAAATCAAACGACCACCATTCAATTTCCCTCTAAAGAAGAATGCTCTCTC
TTCCAGTCCCTCTCTGCTATGGAACAGAATTTACTACGAGCAAGTCAAGA
GGATGAACAGTTGGATCGATTTGTAAGTATCGAAGAACGATTCCAATTGA
ACTATAGTGACGTCAATCTGAACAGTTTACAAGGGGAATATGTtatcaat
gatgaaaatgaaagtgaggTTCAGGACGAAGTAATGTATTCTGCAGAACA
ACCCAACATCATGAATTCACCTATCTCCAAAGACACTGATCGTGTTTTCC
AATCACCAATCGCTCGAAATAATGAAATGCAATTATAAATGAGGAGCAAA
AGATCAAACAAAGTGCAATCATTATGTAAACATCATCTAGATTTCAAACC
CAACCCGTCACCAACATCTTCCACAGAGAAGTCTGGTCTGTTGAGAGTAC
ACGTCATGAAGGCTTCTGTTCACTCCCAGCATCAAAAACTTATGAACAAT
TTGAAGAAATCTTGTCGTGAAAGCGAAAATTTCGGTCCCAATTCTTTGGT
CAAACAATTACAGTCACTTGGCAAAATGTTTGCTCCTCCCAAAAATTCTG
ATCTTTCTCAGATAAATGAAACACCAGCACCGCAACCAGCTATGAAAAGA
GACCAACCGTCAGAGAGAGAATTGATCGAATCTTTAAATTATGTTTTACC
CATCGAAAAGTTCAatcatttcaaaatattgctaccCAAGTCGAAGCTTC
ACGTCACAACGCCTGACGGTGAGGAAGTGATCGTGGAGCCGTGTGACAAA
CACACCAAAGTCAAAGCGACGCACGAAACACACGAAGGCCTTATGAAGCG
CCACAAAACGACCAAAGATGTCCTCCAACTTTTTTCTAAACAGAAATCGC
GTCAATTGAACGCAAACAACTGGCGAAAAGACGATTCATTCTTCATTTAT
GTGTTCGAGAACAAAAAGTTCTTATTCGATAAATCAACCGGTGAAATCTC
GTGTTTTCCAACGCCTGACGCAATGAAGCCAAAACCATCGAACAAAAGCA
AAGGGGAGCCACCTCAGCTTGAACGAAATATTGTGGGCAAATCGTTTGGA
ACATTTATAAATGACTTTTGCAAGAAGCCTGTGGAAGGGAAAGAATACCC
TTCAACCAATCAATTTAACGTTCGAAGCAATCACAATATACAATTGCACG
TGCTGCAACCTGTAGAACAGAAAGCAAACTTCCGATTCGTCATTCATTCT
TCTCCTTTTGGTTCGTTCATTGAGAGAGCCGGTACTTCTCATATCGCAAc
AGGAAATCGAAAACAAACAGCCAGGAAGAATAACAGAGATTACAAGGATC
GTGAAGAAGAAAAGTTAATCGAGCTGATAGAGCAAATACCTAATCAGTAT
CTACCAGACAAAAAACAGCGTAATAAGtatTCTATTGTTCGTGGTTCGAT
TGATTACATAAAGAATCTGGAACGAAAAGTTCGAGAACAACTTGGTATTC
CACAAGTTGAAGCATCAGAGGACCCTTTGGATGTCATAGAAACAGCTCAA
CCAACGGATCACTCCCAACACCCGATGGAACTTTCTGCTTCACAAGAAGA
CCACGAAGACATCACCGAGTACGAAGAGGAGGAAGTGTATGATAACgctt
tcgaagatttctttcaaCTCCTCTGCAATCCCATCTCCTCAACCAGAACA
ACAAACCATGGTGACAATGAGGGAAATCAAACGACCACCATTCAATTTCC
CTCTAAAGAAGAATGCTCTCTCTTCCAGTCCCTCTCTGCTATGGAACAGA
ATTTACTACGAGCAAGTCAAGAGGATGAACAGTTGGATCGATTTGTAAGT
ATCGAAGAACGATTCCAATTGAACTATAGTGACGTCAATCTGAACAGTTT
ACAAGGGGAATATGTtatcaatgatgaaaatgaaagtgaggTTCAGGACG
AAGTAATGTATTCTGCAGAACAACCCAACATCATGAATTCACCTATCTCC
AAAGACACTGATCGTGTTTTCCAATCACCAATCGCTCGAAATAATGAAAT
GCAATTATAAATGAGGAGCAAAAGATCAAACAAAGTGCAATCATTATGTA
AACATCATCTAGATTTCAAACCCAACCCGTCACCAACATCTTCCACAGAG
AAGTCTGGTCTGTTGAGAGTACACGTCATGAAGGCTTCTGTTCACTCCCA
GCATCAAAAACTTATGAACAATTTGAAGAAATCTTGTCGTGAAAGCGAAA
ATTTCGGTCCCAATTCTTTGGTCAAACAATTACAGTCACTTGGCAAAATG
TTTGCTCCTCCCAAAAATTCTGATCTTTCTCAGATAAATGAAACACCAGC
ACCGCAACCAGCTATGAAAAGAGACCAACCGTCAGAGAGAGAATTGATCG
AATCTTTAAATTATGTTTTACCCATCGAAAAGTTCAatcatttcaaaata
ttgctaccCAAGTCGAAGCTTCACGTCACAACGCCTGACGGTGAGGAAGT
GATCGTGGAGCCGTGTGACAAACACACCAAAGTCAAAGCGACGCACGAAA
CACACGAAGGCCTTATGAAGCGCCACAAAACGACCAAAGATGTCCTCCAA
CTTTTTTCTAAACAGAAATCGCGTCAATTGAACGCAAACAACTGGCGAAA
AGACGATTCATTCTTCATTTATGTGTTCGAGAACAAAAAGTTCTTATTCG
ATAAATCAACCGGTGAAATCTCGTGTTTTCCAACGCCTGACGCAATGAAG
CCAAAACCATCGAACAAAAGCAAAGGGGAGCCACCTCAGCTTGAACGAAA
TATTGTGGGCAAATCGTTTGGAACATTTATAAATGACTTTTGCAAGAAGC
CTGTGGAAGGGAAAGAATACCCTTCAACCAATCAATTTAACGTTCGAAGC
AATCACAATATACAATTGCACGTGCTGCAACCTGTAGAACAGAAAGCAAA
CTTCCGATTCGTCATTCATTCTTCTCCTTTTGGTTCGTTCATTGAGAGAG
CCGGTACTTCTCATATCGCAAcAGGAAATCGAAAACAAACAGCCAGGAAG
AATAACAGAGATTACAAGGATCGTGAAGAAGAAAAGTTAATCGAGCTGAT
AGAGCAAATACCTAATCAGTATCTACCAGACAAAAAACAGCGTAATAAGt
atTCTATTGTTCGTGGTTCGATTGATTACATAAAGAATCTGGAACGAAAA
GTTCGAGAACAACTTGGTATTCCACAAGTTGAAGCATCAGAGGACCCTTT
GGATGTCATAGAAACAGCTCAACCAACGGATCACTCCCAACACCCGATGG
AACTTTCTGCTTCACAAGAAGACCACGAAGACATCACCGAGTACGAAGAG
GAGGAAGTGTATGATAACgctttcgaagatttctttcaaCTCCTCTGCAA
TCCCATCTCCTCAACCAGAACAACAAACCATGGTGACAATGAGGGAAATC
AAACGACCACCATTCAATTTCCCTCTAAAGAAGAATGCTCTCTCTTCCAG
TCCCTCTCTGCTATGGAACAGAATTTACTACGAGCAAGTCAAGAGGATGA
ACAGTTGGATCGATTTGTAAGTATCGAAGAACGATTCCAATTGAACTATA
GTGACGTCAATCTGAACAGTTTACAAGGGGAATATGTtatcaatgatgaa
aatgaaagtgaggTTCAGGACGAAGTAATGTATTCTGCAGAACAACCCAA
CATCATGAATTCACCTATCTCCAAAGACACTGATCGTGTTTTCCAATCAC
CAATCGCTCGAAATAATGAAATGCAATTATAAATGAGGAGCAAAAGATCA
AACAAAGTGCAATCATTATGTAAACATCATCTAGATTTCAAACCCAACCC
GTCACCAACATCTTCCACAGAGAAGTCTGGTCTGTTGAGAGTACACGTCA
TGAAGGCTTCTGTTCACTCCCAGCATCAAAAACTTATGAACAATTTGAAG
AAATCTTGTCGTGAAAGCGAAAATTTCGGTCCCAATTCTTTGGTCAAACA
ATTACAGTCACTTGGCAAAATGTTTGCTCCTCCCAAAAATTCTGATCTTT
CTCAGATAAATGAAACACCAGCACCGCAACCAGCTATGAAAAGAGACCAA
CCGTCAGAGAGAGAATTGATCGAATCTTTAAATTATGTTTTACCCATCGA
AAAGTTCAatcatttcaaaatattgctaccCAAGTCGAAGCTTCACGTCA
CAACGCCTGACGGTGAGGAAGTGATCGTGGAGCCGTGTGACAAACACACC
AAAGTCAAAGCGACGCACGAAACACACGAAGGCCTTATGAAGCGCCACAA
AACGACCAAAGATGTCCTCCAACTTTTTTCTAAACAGAAATCGCGTCAAT
TGAACGCAAACAACTGGCGAAAAGACGATTCATTCTTCATTTATGTGTTC
GAGAACAAAAAGTTCTTATTCGATAAATCAACCGGTGAAATCTCGTGTTT
TCCAACGCCTGACGCAATGAAGCCAAAACCATCGAACAAAAGCAAAGGGG
AGCCACCTCAGCTTGAACGAAATATTGTGGGCAAATCGTTTGGAACATTT
ATAAATGACTTTTGCAAGAAGCCTGTGGAAGGGAAAGAATACCCTTCAAC
CAATCAATTTAACGTTCGAAGCAATCACAATATACAATTGCACGTGCTGC
AACCTGTAGAACAGAAAGCAAACTTCCGATTCGTCATTCATTCTTCTCCT
TTTGGTTCGTTCATTGAGAGAGCCGGTACTTCTCATATCGCAAcAGGAAA
TCGAAAACAAACAGCCAGGAAGAATAACAGAGATTACAAGGATCGTGAAG
AAGAAAAGTTAATCGAGCTGATAGAGCAAATACCTAATCAGTATCTACCA
GACAAAAAACAGCGTAATAAGtatTCTATTGTTCGTGGTTCGATTGATTA
CATAAAGAATCTGGAACGAAAAGTTCGAGAACAACTTGGTATTCCACAAG
TTGAAGCATCAGAGGACCCTTTGGATGTCATAGAAACAGCTCAACCAACG
GATCACTCCCAACACCCGATGGAACTTTCTGCTTCACAAGAAGACCACGA
AGACATCACCGAGTACGAAGAGGAGGAAGTGTATGATAACgctttcgaag
atttctttcaaCTCCTCTGCAATCCCATCTCCTCAACCAGAACAACAAAC
CATGGTGACAATGAGGGAAATCAAACGACCACCATTCAATTTCCCTCTAA
AGAAGAATGCTCTCTCTTCCAGTCCCTCTCTGCTATGGAACAGAATTTAC
TACGAGCAAGTCAAGAGGATGAACAGTTGGATCGATTTGTAAGTATCGAA
GAACGATTCCAATTGAACTATAGTGACGTCAATCTGAACAGTTTACAAGG
GGAATATGTtatcaatgatgaaaatgaaagtgaggTTCAGGACGAAGTAA
TGTATTCTGCAGAACAACCCAACATCATGAATTCACCTATCTCCAAAGAC
ACTGATCGTGTTTTCCAATCACCAATCGCTCGAAATAATGAAATGCAATT
ATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012213XLOC_012213Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021763-proteinTCONS_00021763-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021763-exon-sc0000394-1491911889:258353..258683TCONS_00021763-exon-sc0000394-1491911889:258353..258683Clytia hemisphaericaexon
TCONS_00021763-exon-sc0000394-1510915933:258353..258683TCONS_00021763-exon-sc0000394-1510915933:258353..258683Clytia hemisphaericaexon
TCONS_00021763-exon-sc0000394-1575043694:258353..258683TCONS_00021763-exon-sc0000394-1575043694:258353..258683Clytia hemisphaericaexon
TCONS_00021763-exon-sc0000394-1491911889:258821..259501TCONS_00021763-exon-sc0000394-1491911889:258821..259501Clytia hemisphaericaexon
TCONS_00021763-exon-sc0000394-1510915933:258821..259501TCONS_00021763-exon-sc0000394-1510915933:258821..259501Clytia hemisphaericaexon
TCONS_00021763-exon-sc0000394-1575043694:258821..259501TCONS_00021763-exon-sc0000394-1575043694:258821..259501Clytia hemisphaericaexon
TCONS_00021763-exon-sc0000394-1491911889:259818..259854TCONS_00021763-exon-sc0000394-1491911889:259818..259854Clytia hemisphaericaexon
TCONS_00021763-exon-sc0000394-1510915933:259818..259854TCONS_00021763-exon-sc0000394-1510915933:259818..259854Clytia hemisphaericaexon
TCONS_00021763-exon-sc0000394-1575043694:259818..259854TCONS_00021763-exon-sc0000394-1575043694:259818..259854Clytia hemisphaericaexon
TCONS_00021763-exon-sc0000394-1491911889:261370..261460TCONS_00021763-exon-sc0000394-1491911889:261370..261460Clytia hemisphaericaexon
TCONS_00021763-exon-sc0000394-1510915933:261370..261460TCONS_00021763-exon-sc0000394-1510915933:261370..261460Clytia hemisphaericaexon
TCONS_00021763-exon-sc0000394-1575043694:261370..261460TCONS_00021763-exon-sc0000394-1575043694:261370..261460Clytia hemisphaericaexon
TCONS_00021763-exon-sc0000394-1491911889:261623..261680TCONS_00021763-exon-sc0000394-1491911889:261623..261680Clytia hemisphaericaexon
TCONS_00021763-exon-sc0000394-1510915933:261623..261680TCONS_00021763-exon-sc0000394-1510915933:261623..261680Clytia hemisphaericaexon
TCONS_00021763-exon-sc0000394-1575043694:261623..261680TCONS_00021763-exon-sc0000394-1575043694:261623..261680Clytia hemisphaericaexon
TCONS_00021763-exon-sc0000394-1491911889:262127..262250TCONS_00021763-exon-sc0000394-1491911889:262127..262250Clytia hemisphaericaexon
TCONS_00021763-exon-sc0000394-1510915933:262127..262250TCONS_00021763-exon-sc0000394-1510915933:262127..262250Clytia hemisphaericaexon
TCONS_00021763-exon-sc0000394-1575043694:262127..262250TCONS_00021763-exon-sc0000394-1575043694:262127..262250Clytia hemisphaericaexon
TCONS_00021763-exon-sc0000394-1491911889:262414..263313TCONS_00021763-exon-sc0000394-1491911889:262414..263313Clytia hemisphaericaexon
TCONS_00021763-exon-sc0000394-1510915933:262414..263313TCONS_00021763-exon-sc0000394-1510915933:262414..263313Clytia hemisphaericaexon
TCONS_00021763-exon-sc0000394-1575043694:262414..263313TCONS_00021763-exon-sc0000394-1575043694:262414..263313Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000394supercontigsc0000394:258353..263313 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.414544	0	0.361442	0.408982	0	0	0	0	0.401633	0.368217	0	0.456793	0.366046	0.760406	0	0.234682	0.732961	1.03475	0.255393	0.519172	24.1829	21.4148	0.306985	1.30467	0.223592	0.235901
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046983 protein dimerization activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021763 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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