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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022068 ID=TCONS_00022068|Name=TCONS_00022068|organism=Clytia hemisphaerica|type=transcript|length=1611bp
TTTCAGTTTCGTAAAATCTCTTGCACTTACTCACTGTCTTTGGAGATACT
GAGCACGCCTCTTCCCCACTAAGAGAGAACAAAAGATAAAATGAATCAAC
AAGTTACAGCTAGCCAACGTCAAGAGTTATGGAATATTTTCCAAAAGGCA
CCAAAGCCTCAACTTCACCTGCATTTGGATGGATCTTTGTCattcaattt
catcatgaaagCTGCCAAAAGATTACAATCAAGAAAACCTGAAGTAGAGG
tcttcgaaaaaaattggattcctaaaaatgaagaagagctTTTTCTTTGG
CTTGCAAAAATCACTAATGAGGATGTAAACAGTCATTTCAAAGCTGAGGA
ATCTGATAACTGGAGagcttttaatttttgtaataagTTTTTACAAACAA
AGGAAGATCTTATCGAAGCCACGTTTGATATTATGCATCGTGGTCATGAT
GAGCATAATATAAATTATCTGGAAATTCGATTTGCACCTACTTTACATAC
TCTTGAAGGGTTAACAGAGGAAGAAGTGATTCATGCGGTAGGTGAAGGTT
TTGAGAAAGGAGTTCAGCATTGGAAAGATCTTGGTAAGCATGTCGATGGT
GGGATTATCATCTGTGCTTTAAGATCATTTCCAGTGTCTGATGCCATCAA
TTTGGTCAAGAAAATGTCTACCATCAAACATGAACGGGTTCTTGCTTTTG
ATATTGCTGGAGATGAGGGAAATTATCCTTTACGAGAATTCAAAGAAGCA
TTGCAACTTGCCAATGAATGTGGTATTGATATGACTCTTCATGCTGGGGA
ATGGAGTGAGAAACTCCATGATTCAATTATTGATAATATTAAAGTGGCTG
TTCACCACGGTTCTAAGAGAATCGGCCATGGTGTGGCTTTGCGATCTGTT
GACCATAGTGATGAATTGATGACTAATTTACAAGCCAAGAATGTGTTTGT
TGAAGTTAATTTAACATCAAATGTCACTGATCCTAGAAATGTTCCTAGTT
TTGAAGAGCATCCTTTACCGTCATTTCTGGAGAGAAATATCAAAGTGGCT
GGATTGAATGTTGATAATTGGTTATTGGCTGGAAATAAAGATATTGGGCG
TGCTGAACCCACTGGAGAGTTTGTCAGAGCTTTTCTTGATTGTGGGGTAA
CTTCAAAACAGTTGTCTGAAATAGCCAAAACCGGTTATATAGCTGGTTTT
AGAAATGTTTCTGAATCAATTATAAAAGATGCTATGGAAATTTGGGAAAG
CGAAATTATCCCTAAAATTGATGGCTGGAAAGAGAAGCATCTATTCCAAG
GTTGAATAATTTTAACTGGACTTCATCTTAATATTCTGATTGATTCAATA
TTGATTCAATATTGATTCATTATAATTTTAATAACGATTTTTTagtatat
tattatattattgatCAGTATAGTTGTAAATAGATTTTATAAGATTGAAC
ATCAAACTTGGTAAGCTAGTAAAAATCATTAACTTCCTAATtgctttttt
ggacctacctccgggtgccctggtggaggtcctataaattaacccatgtc
cgttcgttcgtccgttcgttcgttcgtccgtccgtctgttaccagctttt
ctcaggattgg Run BLAST on NCBI transcript from alignment at sc0000403:147497..149481- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022068 ID=TCONS_00022068|Name=TCONS_00022068|organism=Clytia hemisphaerica|type=transcript|length=1985bp|location=Sequence derived from alignment at sc0000403:147497..149481- (Clytia hemisphaerica)
TTTCAGTTTCGTAAAATCTCTTGCACTTACTCACTGTCTTTGGAGATACT
GAGCACGCCTCTTCCCCACTAAGAGAGGTTAGCAAACTTTCTTTAATTTA
TTTTTCATTAAATAACAAAATTCTTAAAAATCAAAATATCTTTTAATAAT
TTACAAAGTAGTGTTATAAATGCAATCTGTACTTAGGTGGCTGCATCTTT
TTGATTAGCTAGACTATCATAAGGCAGTCTCATTCCATATATTTTATTTG
CATATCATCAGATTACTTGTATCTTCTTTGTAGTGTTAAATGGTAAATAG
ATACTTACTTACAGCAACGAAGATTATGCGCCTGGTTTTTAGTTAGTTCG
AAAATCTTTTCCAGTTTTTCTTTATCTTTAATGGTTTAAGGGTCACCTAT
TTCATTTAGTTTAATTTAAAAATTTAATTAAAACCTATTTACCTGTTTCA
GAACAAAAGATAAAATGAATCAACAAGTTACAGCTAGCCAACGTCAAGAG
TTATGGAATATTTTCCAAAAGGCACCAAAGCCTCAACTTCACCTGCATTT
GGATGGATCTTTGTCATTCAATTTCATCATGAAAGCTGCCAAAAGATTAC
AATCAAGAAAACCTGAAGTAGAGGTCTTCGAAAAAAATTGGATTCCTAAA
AATGAAGAAGAGCTTTTTCTTTGGCTTGCAAAAATCACTAATGAGGATGT
AAACAGTCATTTCAAAGCTGAGGAATCTGATAACTGGAGAGCTTTTAATT
TTTGTAATAAGTTTTTACAAACAAAGGAAGATCTTATCGAAGCCACGTTT
GATATTATGCATCGTGGTCATGATGAGCATAATATAAATTATCTGGAAAT
TCGATTTGCACCTACTTTACATACTCTTGAAGGGTTAACAGAGGAAGAAG
TGATTCATGCGGTAGGTGAAGGTTTTGAGAAAGGAGTTCAGCATTGGAAA
GATCTTGGTAAGCATGTCGATGGTGGGATTATCATCTGTGCTTTAAGATC
ATTTCCAGTGTCTGATGCCATCAATTTGGTCAAGAAAATGTCTACCATCA
AACATGAACGGGTTCTTGCTTTTGATATTGCTGGAGATGAGGGAAATTAT
CCTTTACGAGAATTCAAAGAAGCATTGCAACTTGCCAATGAATGTGGTAT
TGATATGACTCTTCATGCTGGGGAATGGAGTGAGAAACTCCATGATTCAA
TTATTGATAATATTAAAGTGGCTGTTCACCACGGTTCTAAGAGAATCGGC
CATGGTGTGGCTTTGCGATCTGTTGACCATAGTGATGAATTGATGACTAA
TTTACAAGCCAAGAATGTGTTTGTTGAAGTTAATTTAACATCAAATGTCA
CTGATCCTAGAAATGTTCCTAGTTTTGAAGAGCATCCTTTACCGTCATTT
CTGGAGAGAAATATCAAAGTGGCTGGATTGAATGTTGATAATTGGTTATT
GGCTGGAAATAAAGATATTGGGCGTGCTGAACCCACTGGAGAGTTTGTCA
GAGCTTTTCTTGATTGTGGGGTAACTTCAAAACAGTTGTCTGAAATAGCC
AAAACCGGTTATATAGCTGGTTTTAGAAATGTTTCTGAATCAATTATAAA
AGATGCTATGGAAATTTGGGAAAGCGAAATTATCCCTAAAATTGATGGCT
GGAAAGAGAAGCATCTATTCCAAGGTTGAATAATTTTAACTGGACTTCAT
CTTAATATTCTGATTGATTCAATATTGATTCAATATTGATTCATTATAAT
TTTAATAACGATTTTTTAGTATATTATTATATTATTGATCAGTATAGTTG
TAAATAGATTTTATAAGATTGAACATCAAACTTGGTAAGCTAGTAAAAAT
CATTAACTTCCTAATTGCTTTTTTGGACCTACCTCCGGGTGCCCTGGTGG
AGGTCCTATAAATTAACCCATGTCCGTTCGTTCGTCCGTTCGTTCGTTCG
TCCGTCCGTCTGTTACCAGCTTTTCTCAGGATTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022068-exon-sc0000403-1575043694:149405..149481 | TCONS_00022068-exon-sc0000403-1575043694:149405..149481 | Clytia hemisphaerica | exon |
| TCONS_00022068-exon-sc0000403-1575043694:147497..149030 | TCONS_00022068-exon-sc0000403-1575043694:147497..149030 | Clytia hemisphaerica | exon |
| TCONS_00022068-exon-sc0000403-1510915933:149405..149481 | TCONS_00022068-exon-sc0000403-1510915933:149405..149481 | Clytia hemisphaerica | exon |
| TCONS_00022068-exon-sc0000403-1510915933:147497..149030 | TCONS_00022068-exon-sc0000403-1510915933:147497..149030 | Clytia hemisphaerica | exon |
| TCONS_00022068-exon-sc0000403-1491911889:149405..149481 | TCONS_00022068-exon-sc0000403-1491911889:149405..149481 | Clytia hemisphaerica | exon |
| TCONS_00022068-exon-sc0000403-1491911889:147497..149030 | TCONS_00022068-exon-sc0000403-1491911889:147497..149030 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000403 | supercontig | sc0000403:147497..149481 - |
Blast
The following BLAST results are available for this feature:
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