TCONS_00022111 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022111
Unique NameTCONS_00022111
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1385

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022111 ID=TCONS_00022111|Name=TCONS_00022111|organism=Clytia hemisphaerica|type=transcript|length=1385bp
CAATATTATGACTCTTGCTTGAACATAAAGATAAGGAAAAACTGACACAT
AGTTTTAGAGTTATAAAGAAATCACAAATCCTTCCATGCCTCTAAAAAAG
GGAGGCATTTCTTAAAATTATATGATGGTTAGATTTTATcttcattgaag
atttctttcATAATGGAGGTAGACAAAGACCAACTACTGGATGAAATATC
GTTGAATAAAATGACGTTCAGAGTCAATGATCAAGGTATTGCCGAGTATT
CTGATGACGACTCTGAAAATGATGAAGCAAGTCTTGCCAGTTATAACATG
CTTGATTATTTCGATGGCGGTGATGAATTACCACCCTCGAGAGAGAGCGG
CTCGAAATCGAGATCATCAAAATTGAATCGTATTGAAGACTTACCGTTTT
ACCACCCTGGCGTAACGAGAAACACATGTGAGGCGTTGTTATTAGCCAAT
GGGATTGAAGGAAGTTATTTGGTTCGACCAAGTGGCAATGAGAAGGACCG
ATTTACTGTTTCAGTAAGGtgttcgaattctatcaaacaTTACGCATTAG
ACATTAATCATTTTAAACATACGTACGCATTCGGTATCGCACAATTTGAT
TCAATCGATGAATTATCCGAACATTTTAAATGTATGCCAGTGCTTGGCAG
TGAATCAGGAACTTCGGTGACACTCAGACACCCATATAAACACGACATTC
CAGAACCAACTCAATATGAACACGTAGTCAGACACGCTGAACTTGGGAAG
CAAACATCATTCAATCAAGACATGGCGAAACCATCACCAGATCTACATAT
AGCTTCAAAAGAAGGTTATCTCATCAAGAGAGGTGCAATTCATAAAAACT
GGAAGAAAAGATGGTTTGTCCTGCAAAAGAACTTATTAAaatattacaaa
gaaaaagaggaATCGACTCCAATTAAGACCATCGATTTAGTTGACGCAAT
GCATGCAGTGGAAGACTTCTGTGATGGACGAAATAATTGCTTCCGATTAG
CCATGCCAACAAGGATATTTTATTTTGTGGCTAGTTCACCTTCAGAAGCT
AAATCATGGATTGAACTTTTACAGTGGAAAATTGAATATTACCAAGAAAG
GAAAACGAATCAATCGAAGACTCGTTTAAACAATTCGTTGAAAACAGCTG
GCGAATTAGCGGAACATGCTGCATACCTTGGACAGCACTATAAGCAGTGA
TTGTGTTTTTATGTAGAGAAAATTTATTTggacaaaaattaagaacacaa
CGATGCTGGCTATCGATACCCAAAGTTCTTTCAACAACCATTTGGCGTCA
AAATAACGTCCATAACGTCCGTACGTATACCGTCAGATAAACATTGAAAT
AATGTTACGAGTCAGCTAGTTACTGGAAATTGAGA
Run BLAST on NCBI

transcript from alignment at sc0000405:40498..49614-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022111 ID=TCONS_00022111|Name=TCONS_00022111|organism=Clytia hemisphaerica|type=transcript|length=9117bp|location=Sequence derived from alignment at sc0000405:40498..49614- (Clytia hemisphaerica)
CAATATTATGACTCTTGCTTGAACATAAAGATAAGGAAAAACTGACACAT
AGTTTTAGAGTTATAAAGAAATCACAAATCCTTCCATGCCTCTAAAAAAG
GGAGGCATTTCTTAAAATTATATGATGGTTAGATTTTATCTTCATTGAAG
ATTTCTTTCATAATGGAGGTAGACAAAGACCAACTACTGGATGAAATATC
GTTGAATAAAATGACGTTCAGAGTCAATGATCAAGGTAAGAAGATTGGAT
TTCGAATTCTGAATTTTAATTCCAGTGGCACACTTTCTATGTATGTACAC
GTTTTTTATAAGAACAAACTACATACGTAAGAACATAATTCTTCGATGGA
AAAATAATTAAAGTCTATAAGTCTATAAGTGTGCACTCTTTTTTCATTAA
CCTATAACTTTTGAAGGAATTCTTCAATCTTTATAAATTTGGTATCATTG
GAAAGATATTAGTGAGTGGAACAATTTGAAATAAAAAAAACTTTAAAAAA
AGATTATAAAAATGAAGATGAAAATGAAGAAGAAAAAAATGAAGATCTTG
TAGAAAAGTGCTATAACTATCATTTTCATTGGAGTGAATCCTTAATCATC
GAACATCATCACTGTGAAAAAAATTCTCAAAAATAATCATTCAGTCAAAA
GATATCAAACAAAGTTATAAGCTGATTGACGTCTAAAAACGCTGTTTTCN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTGCTGTTTT
TTGGGGTCAATCACTTATTAACTTTGTATCATAACTTTATATTGAATAAA
TATTTTAATGAAATTTCTTCACAGTGATGATCTGCTAAGATCAAAGAATC
TCTCAAGTGAAAATGAAAGTTATAGCACTTTTCTACAAGATCTTCATTTT
TTTCTTTTTCATTTTCATCTTCATTTTTAGAATTTTTTTAAAGATTTTTT
TATTTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTTATTTCAAATTGTTCCACTCATTAATATCTTTCCAATGATACCAA
ATTTATAAAGATTGAAGAATTCCTTCAAAAGTTATAAGTAAAAGAAAAAA
GAGTACACACTTATCGTGAATAGACTTTAAGAACAATTTAGAACAATTTA
AGGCTCAATGGACTCCAATTTTTTAAGAAATTGCACAAAAAAATACTCAC
AAAATGGTCAAATTAAGAACACCTTAATTAAAAAAAAAATTTTGAACTTA
AAATTAGAACACCTGCTCAAAAGTTTTCGATATTCTTAAAAAGTAATCGT
AGGTTTTATTTTTCATCATTAAATTTATCTGGCCCAAGAAATTTTTCAAG
TTTTGCTAATGGGATTTGATATATCCTATGACTTCAAATTCATTGTCTTA
TTTTACCAAAAGGTATTGCCGAGTATTCTGATGACGACTCTGAAAATGAT
GAAGCAAGTCTTGCCAGTTATAACATGCTTGATTATTTCGATGGCGGTGA
TGAATTACCACCCTCGAGAGAGAGCGGCTCGAAATCGAGATCATCAAAAT
TGAATCGTATTGAAGACTTACCGTTTTACCACCCTGGCGTAACGAGAAAC
ACATGTGAGGCGTTGTTATTAGCCAATGGGATTGAAGGAAGTTATTTGGT
TCGACCAAGTGGCAATGAGAAGGACCGATTTACTGTTTCAGTAAGGTACA
ATTCTTAACTTTTTTTATTTAACACACCCCTGTCTCACAGCCCCGGTGGA
ACTTCTTTACAATGGAGATAAAAATTCTTTTCCGAGAATTGGCGAAACCA
ATTTAATTTGTTGTTCTACGGGCAGATCGTTAGCAAAATATGAGTCGGTT
GGTCGGTAAAATAAAACTAAGATTAATCAAGGAAAGTAATTAGGCTTTAA
TTAATATTTTCAAAAAATCTTGGTCGAAAATTCATCATTCATCTTTGAAG
GAGTTTGTAATAAAATCTTTCGTGCATAGAATTCATGATTTTAGATTCTT
TTCAACTTTTTTAAGTGTAAAATTTTTAAATGACTAGTATTAGAAATTTG
TGGCATAGGAAATTCAATATTATTAATTTTTCGTTTGCAGTAAATGCTGG
GTCGGTAGCGCCCGTAGAACAGCAAATTAAATTGGTCTCGCCCTAGGTAT
AAAGTTCCTTTTCCCCACCGGGACAAAATGTTATCCAAACTTTCTAGTAA
GGCGGGGGTTCAACCGGTTCTGTATCAGAGGGGTGTTTTAACCTTTAATA
TACCTTTATAACAAACTCGTGTCTCAATTTATATAGGTTACCATAATTAT
AGTATCTCACCAATTTTATAACTAGAAATGGAAAGTATTGTTACAACTCA
AATACTAGTCATTTATCAGACTAGACTTTCATTATTCGTTTGTTCGTTCA
TTCAGCTAGCCTAGTTCGCAAGCTCTTTCGCCATAATTATCCCTTTTCTT
TCTCTATTAATCCCGATAATTCCGGTTTCATTTCAACTGGGATTAAAATC
GGGATTATCTATCACTGTTTAGACGTTGTCAATCTATGGATAAGCTTTTA
AAACAAAACTTGTATTTTTCTTCGTCAAAAGATTTATTTTCAAACAAAAT
CCAAACGTGAAAACTTGAATCTCAGTTATAAAAATAAAGAAAGCCCGAGA
AAAAAACTGTATACTATGCAAAGTTGTGACGATATGGTCATTTTTTATAG
TAAAAAATAATAGTTCTGAGACTTATTGATTGATTTTACGTCACTTACAA
CCAATCAGCTGTTGGGTCCGTGAGTATTGTCAGAAGACATGCATATCATG
AATTGACTCTACGTAAAACGGGCTTGGTTCAAGTCTGCTCGGGTCTCCAC
TGACGTGCGCGCGTCACAGATAAAGATATTTGACGTCATTCGAATCTGGT
TAACTCGTACCCAGGGTTTCCTATGGTGCAAGGGTTTATTGGTTTAATTG
GTTTAAGTGCGGCTGAAAATTGTTAAAACATTGAACATTACTTTGGCATT
TAAGTTTTCTATCTTGATTTAGAATAATTATGCGAGATCTTGTTTTTTAG
ATAGTTTGAAAAATCAAGAAATATATTTTCAGGAATATTTCAAGTTAAAT
AGTTTTACACCTTTAACGAAAGATGTATTTGAAATGCATCATGGTCTATA
GTTAGTGAATTATGGGAAATTTGTTCAGTGCATTGCATCAACGAAGAAAA
TATACAATTACAGAAGATGATGAAGACTTCACAGATGTCTCTGATGAATT
ACTGTACTAATATTTTTTTCAAGTTTTTTGTATATTTTGATGTCAATGTC
TGAGTCTAAATGAATGATACCTCTCTGAATTTTTACGAAAAATTCGTGGA
CTTTCTCTAGCAAACTTTCAAGGGATCTTTTTTGGATTCTTAGTCCATTA
CAAAGGGTCCCGTACAAAATTCTGCTTCCGCCACAATAGATTCTATTATG
GGAACTGTTTATGGGACACTTTGTATATCAAAAGGAGAGAGATTTTTCTC
ATATGAGGTTCAGTCAGAAACACAGTATTTCTACTGAAAGTTTAAAATGG
CGTACTATAACGTATTCTAGTATAACTTAGCATAGAGCCTATCTGAGCAA
TCTGAGATTGTCTCTACAGCAATAGATTTTGAAATTTCCGTTTACAGACA
AACTATAACGTTTTTCTTACTCCTTTTTACATACAGGTGTTCGAATTCTA
TCAAACATTACGCATTAGACATTAATCATTTTAAACATACGTACGCATTC
GGTATCGCACAATTTGATTCAATCGATGAATTATCCGAACATTTTAAATG
TATGCCAGTGCTTGGCAGTGAATCAGGTTAGCTTTTACAGTTTTTTTTAC
ATGTACGTAGAATTTAAAAACCCTTTAACCCCCCCGGTACGTATTACGGT
ACTTTATACAGCACTTAATCTATTAGAAGTTTTTTTTCGAGAACACAGAG
AAGAAAATTATCACGAATTCAGCAAATGCTAACTTCAAAGTGAATTAATT
CTTTGATGATAATTGTTGTTCAAAATATACTTTGTACTTTAGCCTATATG
TTAACAAACTTAAGATCGTTGAAACTGTCTTTCATCTGATTGGTTGATGT
CATTTCTTAGAAGCAGACACTTAAAAGACTTTCAAATGAATGAATCAATG
ATAACACTTCATCATTTTTTTTCTATTCAAGTCTGTCAAATCACTTTTGT
TTTTCTAGGAACTTCGGTGACACTCAGACACCCATATAAACACGACATTC
CAGAACCAACTCAATATGAACACGTAGTCAGACACGCTGAACTTGGGAAG
CAAACATCATTCAATCAAGACATGGCGAAACCATCACCAGATCTACATGT
AAGTTTACCATTGAACTTACTACGTAATGAACTAATCAAGTCTTTTATTT
AATGCCTGAAAAAATCAATGCAACAATTTATTTAACGGTCGTGTGCAGGA
TTTTTGAAAATTACTTTTTATCAATTTTTAAGATGTGTACCTGATAAGGT
CGACTTTTGGTTATTTTGGACAATTTTTAGAATGGAAATTAGAAAATGTT
TCAATTTTTCGTCTACATTTCGTCACTTTTCCTACTTTTCGGGCTGAAAA
TGGAATTTTTTTTCTCGATTTTTCGTAACAATTTTTCCGAACATTCATAT
CTGACAGGGTCATCTTCTCAAACTCCCCCCCCCCCATACTGGGATTTCGT
CACACTGAGACACATAAAATATACAGTTTTTTCTATTTCTCACTTTAGAT
AGCTTCAAAAGAAGGTTATCTCATCAAGAGAGGTGCAATTCATAAAGTAA
GCATTCTGAACAGAGGGTGTTACAGACACATTCATACCTCGGCCCCACTT
GAAAATGTGTCCAAAATTACGTTCCCGATGGGAAAGATACCCTATAATTT
CAGCCCCACTGGGAGTTCATTCCTTTAAGAAAGTGACGTGCTTACTGCAC
GGAGTCTGATGTAAAAACTGATCTTTCGATATAAGATTACGGGCTCTATA
CAAAATGAATAAAATGCAGACCAAAGTGGTCTTTATAATATATCACAATC
CCCATTCGAAATTCAATACGTAAGAAATTGCACTTCAAACTATCCCAACT
GGATGTTTTTAACTTGGAACAATATAATTTCTATGCCTGCTGTAGAGAAA
AATTTCACTGAGGTTGTGAGACAGGGGTTTATCTGAAACTCATCTGGCAA
CGATTGTGAATAAACTATTTCTTTTGAATAATTTTTTCCGAATTTCTCTG
TAGTTCGAACTATAATAATGACCTACTTAGATTTTAAAAATTTATTGCAA
AAGACACACAAAGCATTTTTAAATTTTAAGAAAAGTTTTACACTCTTGAT
ATCATTTTTAAAATTCATTGCTTATTTTCTTAGAACTGGAAGAAAAGATG
GTTTGTCCTGCAAAAGAACTTATTAAAATATTACAAAGAAAAAGAGGTTA
GTCCTCCCTTTGTTGTGCCTAGACCTTTAGTTCGTCCAACGAACATTGTG
CCAAATCTATTTTCTGTTTAAGCAGTCATTTGAATCCATGTCATTAAAAT
GACACGTGTAATGCGTAAGATAGTGGTCAATAAAGTCGTTGCATAAAGGC
CAGTCTCCACTTTCGCGCGAAGTGAGCGAAAATTTTTAACGTTTTTGTAA
GGTTATTGGTCGGTTGAAAAATGAAGCAATTCCATTGGCCAAAATTGACG
TAACGGTTGAAAAAAGTTGAGCTTTCTGCAACTTTTTTTTGTTCACGCGA
AACTCTTTTATGACGTAATCTTTTCTTTAGGCAAAAAAGGTTGAGAAAAA
AACTGTCGCCCATTTCGCACGAAAGTGGATACCGGCCTTTAGAATTGCAA
TATGACGTCACTTAGTTTAAGGAACTTAGAATGCCCATCGATATTAATCA
CATGCCCAAAATAAAATGGAATTCAATTTTTTCACCAGTATTTCCTGACC
AGGTAGATATTCAATGACTTGAGTTCTTGGCCTCACCGTATATGAAAATC
TTTGCAATTTGTCTGAAATTTGGTGGAGTTTTCCTTGGATTTTCCTTGGA
TTTTCTTGGATTATTTGAAACGTTTTTTAAGAAAGTCAAGCTAAAATTTC
ATTATTTTTAATTTCAGGAATCGACTCCAATTAAGACCATCGATTTAGTT
GACGCAATGCATGCAGTGGAAGACTTCTGTGATGGACGAAATAATTGCTT
CCGATTAGCCATGCCAACAAGGATATTTTATTTTGTGGCTAGTTCACCTT
CAGAAGCTAAATCATGGATTGAACTTTTACAGTGGAAAATTGTGAGTGTT
GATATTTTTTTCAATAATGCATTGTCGTTTGAGCTATAATAATTAGTCTG
GTCTAAGGGGTCGATATGACACAGTTGAGTGGAGTGACACACAGGAGTTG
GGCTAGTAAGTGGGCTAGTAACCACATGCTTTATAAACTGAATACTGCTC
AAAGAGATCAAAACTAGTGCAAAACTTCAAAATAACTTCCTTAACATCCA
TATTAAGTTTTTTTTAATATTGAAGCAACGTTGCGTACCAGCTTGTAACT
CCCTATGTTACCTAGCAATTATATTGATTAAGAACTCTATTTTTTTTACT
ACCTAATCGGCCCTTTTGACACCAGCCTTATTACGCTGGCGTAATAAGGG
CTAGCGTAAAAAGGGTCGATAAGGTATAAACCTGGGAAAAGGTTTGTTCG
TTAGTTCTTCTTTAATTCGCTATTTTATCATTGGTTATGAATTTGTGTTG
GGTTAGAGGAACCAAGCTGAAACAGAACGTCAAATCTTAATTTTTTGGTT
TTGAATTACTGTGACTTTAGTTTTAGACAAATATTGTCTATATATAATTT
GCTTAAACATCCGTTTTTTTTCTTAGGAATATTACCAAGAAAGGAAAACG
AATCAATCGAAGACTCGTTTAAAGTAAGTGGGCCATACTGTTACTTTAGT
AAGGCTTGCAACACAACAATTGTTTGGTCACCTAGTCACATCAATATTTA
TCTGCATGTACTAAAAAGTTTAAGTGGCACGTGAAAATATTTTGAATAAA
ATGAAAGACCTAGGGATGAGCTTTAAACTAGTGGGTTCCCAGCTGGCACA
CAACGTTGTTTTAACGTTCATCTAACATTATATGGACGTTGTGAACATTA
GATTAACGTTGAAACGACGTTGTGTGCAGGCTGGTTTGGGAATTTTTACA
GCTTAGTATTCCGGATAAGATTCTTAAAATTATAATATTTTGCATAAAGC
AGATTTAGCAGATTTCAGTAAAGTTTTCCTATGGGAAGGAAATGAAGGTC
TGCACCCTGTTTTTTGACAATTTTCTTGTCTTTAGAAAGTTCTACCCATA
AGAGAAAGAGTGAAGTTTCCTTTTCTGCTTTGCACTGCACTTTCAAACTG
CAACTGTATTGCACACAAAACATATCACAAAATGTCATCAAAAATTATGC
ATGCGTATGCGTCAACCTGCAAATGTACCTAAACCGCTATACTTTTTCAA
GAATATGATACCTCATCCATAGCATTTTTTACTTAGAACCACACTCAAGT
ATACCGTGAGTATCACAGTGCATGAATTTTACACTGTGACGACAGATAAA
TTTAAGAGAAAGCTAAACTGTGACGACAGATAAATTTAAGAAAAAGCTAA
ACTGTGAAGACAGATAAACTTAAGAGAAAGCTAAACTGTGACGACAGATA
AACTTAAGAGAAAGCTAAACTGTGACGACAGATAAATTTAAGAGAAAGCT
AAACTGTGACGACAAATAAATTTAAGAGAAAGCTAAACTGTGACAACAGA
TAAATTTAAGAGAAAGCTAAACTGTGACAACAGATAATTTTAAGAGAAAG
CTAAACTGTGACGACAGATAAATTTAAGAGAAAGCTACACTGTGACGACA
GATAAATTTAAGAGAAAGCTAAACTGTGACAACAGATAATTTTAAGAGAA
AGCTAAACTGTGACGACAGATAAATTTAAGAGAAAGCTACACTGTGACGA
CAGATAAATTTAAGAGAAAGCTAAACTGTGACAACAGATAATTTTAAGAG
AAAGCTAAACTGTGACGACAGATAAATTTAAGAGAAAGCTACACTGTGAC
GACAGATAAATTTAAGAGAAAGCTAAACTGTGACAACAGATAATTTTAAG
AGAAAGCTAAACTGTGACGACAGATAAATTTAAGAGAAAGCTAAACTGTG
ACGACAGATAAATTTAAGAGAAAGCTAAACTGTGGTGCTCACGGCTCACG
CTAGCTCAATTACCGAAACCCAAAATAGATCAATCACACTTTCAGCATGA
ATATACCTTATCATTTAATATTCTCTGTTTTTCACTTTGACGGAGTTCCA
AATTTACACTTCTATATCATCAAATCAAGGCTCAGGTTTTGCTATAATCA
TTTGCACATAAATCTTTTTTATATCTAGAGCATTGAGTCCAAAGCAAAAG
GCTCTAAGAATCTCCGACCTTTACTAAGCAAGAACAAGTGAAGCCTTACG
ATTTGATGCAAGGATTGAATTTAACGTTTTCTTTGTATTCACACGGAACA
TTTTTCGAAATTAAAATAGCTCGAATTTTAAAATAAAATATTAAAAATGC
GTTCTAAATAACATGATCAAAACAAAATAATTGATGACGTTTTGTTATTG
TTTTGCAGCAATAATGGTAGCACCAGTAGTGCTGGTAGTCAAGGCAACAA
CGAGAACAACACGGCAACGTCAGGGTGGAACCAAAACGATTCTCTGTTTG
TCTCTTTTCCAGCAATTCGTTGAAAACAGCTGGCGAATTAGCGGAACATG
CTGCATACCTTGGACAGCACTATAAGCAGTGATTGTGTTTTTATGTAGAG
AAAATTTATTTGGACAAAAATTAAGAACACAACGATGCTGGCTATCGATA
CCCAAAGTTCTTTCAACAACCATTTGGCGTCAAAATAACGTCCATAACGT
CCGTACGTATACCGTCAGATAAACATTGAAATAATGTTACGAGTCAGCTA
GTTACTGGAAATTGAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012399XLOC_012399Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022111-exon-sc0000405-1575043694:49380..49614TCONS_00022111-exon-sc0000405-1575043694:49380..49614Clytia hemisphaericaexon
TCONS_00022111-exon-sc0000405-1575043694:47820..48102TCONS_00022111-exon-sc0000405-1575043694:47820..48102Clytia hemisphaericaexon
TCONS_00022111-exon-sc0000405-1575043694:45689..45828TCONS_00022111-exon-sc0000405-1575043694:45689..45828Clytia hemisphaericaexon
TCONS_00022111-exon-sc0000405-1575043694:45167..45306TCONS_00022111-exon-sc0000405-1575043694:45167..45306Clytia hemisphaericaexon
TCONS_00022111-exon-sc0000405-1575043694:44719..44766TCONS_00022111-exon-sc0000405-1575043694:44719..44766Clytia hemisphaericaexon
TCONS_00022111-exon-sc0000405-1575043694:44069..44131TCONS_00022111-exon-sc0000405-1575043694:44069..44131Clytia hemisphaericaexon
TCONS_00022111-exon-sc0000405-1575043694:43224..43397TCONS_00022111-exon-sc0000405-1575043694:43224..43397Clytia hemisphaericaexon
TCONS_00022111-exon-sc0000405-1575043694:42592..42638TCONS_00022111-exon-sc0000405-1575043694:42592..42638Clytia hemisphaericaexon
TCONS_00022111-exon-sc0000405-1575043694:40498..40752TCONS_00022111-exon-sc0000405-1575043694:40498..40752Clytia hemisphaericaexon
TCONS_00022111-exon-sc0000405-1510915933:49380..49614TCONS_00022111-exon-sc0000405-1510915933:49380..49614Clytia hemisphaericaexon
TCONS_00022111-exon-sc0000405-1510915933:47820..48102TCONS_00022111-exon-sc0000405-1510915933:47820..48102Clytia hemisphaericaexon
TCONS_00022111-exon-sc0000405-1510915933:45689..45828TCONS_00022111-exon-sc0000405-1510915933:45689..45828Clytia hemisphaericaexon
TCONS_00022111-exon-sc0000405-1510915933:45167..45306TCONS_00022111-exon-sc0000405-1510915933:45167..45306Clytia hemisphaericaexon
TCONS_00022111-exon-sc0000405-1510915933:44719..44766TCONS_00022111-exon-sc0000405-1510915933:44719..44766Clytia hemisphaericaexon
TCONS_00022111-exon-sc0000405-1510915933:44069..44131TCONS_00022111-exon-sc0000405-1510915933:44069..44131Clytia hemisphaericaexon
TCONS_00022111-exon-sc0000405-1510915933:43224..43397TCONS_00022111-exon-sc0000405-1510915933:43224..43397Clytia hemisphaericaexon
TCONS_00022111-exon-sc0000405-1510915933:42592..42638TCONS_00022111-exon-sc0000405-1510915933:42592..42638Clytia hemisphaericaexon
TCONS_00022111-exon-sc0000405-1510915933:40498..40752TCONS_00022111-exon-sc0000405-1510915933:40498..40752Clytia hemisphaericaexon
TCONS_00022111-exon-sc0000405-1491911889:49380..49614TCONS_00022111-exon-sc0000405-1491911889:49380..49614Clytia hemisphaericaexon
TCONS_00022111-exon-sc0000405-1491911889:47820..48102TCONS_00022111-exon-sc0000405-1491911889:47820..48102Clytia hemisphaericaexon
TCONS_00022111-exon-sc0000405-1491911889:45689..45828TCONS_00022111-exon-sc0000405-1491911889:45689..45828Clytia hemisphaericaexon
TCONS_00022111-exon-sc0000405-1491911889:45167..45306TCONS_00022111-exon-sc0000405-1491911889:45167..45306Clytia hemisphaericaexon
TCONS_00022111-exon-sc0000405-1491911889:44719..44766TCONS_00022111-exon-sc0000405-1491911889:44719..44766Clytia hemisphaericaexon
TCONS_00022111-exon-sc0000405-1491911889:44069..44131TCONS_00022111-exon-sc0000405-1491911889:44069..44131Clytia hemisphaericaexon
TCONS_00022111-exon-sc0000405-1491911889:43224..43397TCONS_00022111-exon-sc0000405-1491911889:43224..43397Clytia hemisphaericaexon
TCONS_00022111-exon-sc0000405-1491911889:42592..42638TCONS_00022111-exon-sc0000405-1491911889:42592..42638Clytia hemisphaericaexon
TCONS_00022111-exon-sc0000405-1491911889:40498..40752TCONS_00022111-exon-sc0000405-1491911889:40498..40752Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000405supercontigsc0000405:40498..49614 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	2.74161	1.64375	2.65413	6.53673	3.90685	6.1025	4.00376	3.78749	4.21305	3.03062	9.0963	7.27322	5.44592	6.07801	1.4586	7.68763	3.63035	3.30834	1.20542	2.49344	5.18405	4.80498	0.892705	0.947191	4.1529	3.88216
Blast
[Close]
BLAST of TCONS_00022111 vs. Swiss-Prot (Human)
Match: DAPP1 (Dual adapter for phosphotyrosine and 3-phosphotyrosine and 3-phosphoinositide OS=Homo sapiens GN=DAPP1 PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 6.897e-53
Identity = 92/234 (39.32%), Postives = 142/234 (60.68%), Query Frame = 1 
Query:  382 IEDLPFYHPGVTRNTCEALLLANGIEGSYLVRPSGNEKDRFTVSVRCSNSIKHYALDINHFKHTYAFGIAQFDSIDELSEHFKCMPVLGSESGTSVTLRHPYKHDIPEPTQYEHVVRHAELGKQTSFNQDMAKPSPDLHIASKEGYLIKRGAIHKNWKKRWFVLQKNXXXXXXXXXXSTPIKTIDLVDAMHAVEDFCDGRNNCFRLAMPTRIFYFVASSPSEAKSWIELLQWKI 1083
            ++DL +YH  +TR+  EALLL+NG +GSYL+R S      +++SVR  +S+KH+   + +  +++ FG  +F S+ +  +HF   P++GSE+GT + L+HPY   + EP+ YE V  H  +  QT   +D   P+    + +KEGYL K+G + K WK RWF L +N LKY+K++    PI+ +DL +      D+   R NCF L  P R FY  A +  EA  WI++L+WK+
Sbjct:   30 LQDLGWYHGNLTRHAAEALLLSNGCDGSYLLRDSNETTGLYSLSVRAKDSVKHF--HVEYTGYSFKFGFNEFSSLKDFVKHFANQPLIGSETGTLMVLKHPYPRKVEEPSIYESVRVHTAM--QTGRTEDDLVPTAP-SLGTKEGYLTKQGGLVKTWKTRWFTLHRNELKYFKDQMSPEPIRILDLTECSAVQFDYSQERVNCFCLVFPFRTFYLCAKTGVEADEWIKILRWKL 258
The following BLAST results are available for this feature:
BLAST of TCONS_00022111 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DAPP16.897e-5339.32Dual adapter for phosphotyrosine and 3-phosphotyro... [more]
back to top