TCONS_00022213 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022213
Unique NameTCONS_00022213
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2130

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022213 ID=TCONS_00022213|Name=TCONS_00022213|organism=Clytia hemisphaerica|type=transcript|length=2130bp
taaaaacataaaagatATCAAAACTTGCAATCCAAAATGGCACTGATGGA
CCCAAACATTTTGAGCGTGTTGAACGGGTTATTATACCAAGAAACTGGAA
CAACAATAACACCATCAAATGGTCTTCATCCAGCACTTGATACTACTGCA
TCCTTCCAGCCAACCAATGACGATCTAAATACTTGGCTTTGCAACAATAC
GGAGGCTTTGAAAGGCCAATCAAATGCGTGGACGACACAAGACGAACACG
AGACTAACTCCAAAAAGGCAAGGTTGTATAATTCAACAACACAGAATTCA
TCTAACCAACTCATAACAAATTCAACTACCACAACAGCAGCAAGAAAAAT
GAATGTTCCAGACGAGCTCACCGCTACAGAATACTTGAATCAGCTATTGC
AAGACAAAACTACTGTCTCAAAAATGCCGAAGATCTTTTTGCATTCTGAA
AGACTTCTAGATGAAGaaattagTCGTGTACGAAATGACATATTTTGCCC
GTCAAGCTTCTTGATGTCACTGCCAAAACCCTCTGGACCTCCTGTGAAGT
TAACTGAAAAAGTTTATGCAAAAGTCAAAGATCACCCTAAATTCAACTTT
GTTGGTCGTATTATTGGTCCACGTGGTCTCACCTTACGTCAAGTTGAGCA
AGAAACAGGAGGGAAGCTTCTTGTTAGAGGAAGAGGTTCAATGAAAGACA
AGAAAGTGGAGGAAGAAAAACGTGGACAACCAAACTATGAGCATTTGGAT
GAGGATCTTCATGTTTTGATAATGGTTGAAGATACTGAAGATCGTGCTcg
aatgaaattgaaaaaagctgTTGAAGAAGTTAACTTCCTCCTTACACCTC
CAAAAGACGGAGAAGATGCGATAAAAAAGAAGCAACTTCAGGATCTTGCA
ATTTTAAATGGTACTTACAGACACCCCAACAGTGAGGCAAGCCCTCCTGC
TGCTGCCACAGTCACTCAAAATGGTGtatCTCCAACTGGGCTGTTAAGTT
TTCCGAGTCCTTCACCAGTCGTTCCACAAAACAATACATCATTTCCAGCC
ATCCGAAACTCAGCAGCAGCTGCACTGCAAGGCTTATATCCTCTTGAAAC
TTTCGCTCAAAGAGGCACACCGGGTGCTTCGTTTCTGGATTTTACCAATC
TGGATGGCAGCTCGCTAATTTTGAGTAAAAGATGATAATTCATTCCAAAC
CGGCTGTAACAACTACtgtccaaaaatttaaaaactgttttgttgtgatt
tggtttatgtttttttattgcGATATtcgcaaaataaatttcaaattaaa
tttttgtaaatccAATTTTATTGTATGATAATTTTATACGTTTGAAGTTT
AGTTCAAGATTAATCTTGATACTAATTTTAACTTATATTTAATATAAATA
ACACATAAACGCTATTTTTACTAACTATTTACTTTTTTACcatttaataa
taataaaatactcAAATTGTGTCTTTTTTAACGACGTTTAAAATGATAAA
TTGGAAAACTTGTATTTACTATTTATTCtgcaatttttatattttttaaa
ctaactttcattattttgttattttttgaaagCAATCTTGAGGAAACTGC
ATACATTTTAGGGCAAGAAGGGTTCAACACTTACagtacattacattaca
ttctTTATGCAAGTTTCAGAAATCCcttgccttaaaaaatcttgaatttt
tccTGTGGATagtattatttttaaaaaacagaTTTCTCTGAATAATGTAG
TAGAACTtactattttcatttcaataatattttatttgacGCTCAAAAGT
AAAGAATTTTATAGAAATATGAAGAAGTTtatgaatttgataaaaaacaa
aaattctaaCAACTCATGCTAAGAAAGGTCATGACATTTCAACATGGAAC
CGACCATGAAATGCTActaataacaacaacaacagaaatGTATTGACCCA
GAATAAACCCTGCTAACATCACGACTACTTATGTCATCCAACCAATCAAC
TGAAGAGAGAATTATTACAGAAAACTGagcaattttattattttatatga
AGATACTTTTaggtatttatttatttagcatAGATTATGTgaagagaaat
aaagaaaaaatgaattttaaaatatttttg
Run BLAST on NCBI

transcript from alignment at sc0000408:176230..184078+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022213 ID=TCONS_00022213|Name=TCONS_00022213|organism=Clytia hemisphaerica|type=transcript|length=7849bp|location=Sequence derived from alignment at sc0000408:176230..184078+ (Clytia hemisphaerica)
taaaaacataaaagatATCAAAACTTGCAATCCAAAATGGCACTGATGGA
CCCAAACATTTTGAGCGTGTTGAACGGGTTATTATACCAAGAAACTGGAA
CAACAATAACACCATCAAATGGTCTTCATCCAGCACTTGATACTACTGCA
TCCTTCCAGCCAACCAATGACGATCTAAATACTTGGCTTTGCAACAATAC
GGAGGCTTTGAAAGGCCAATCAAATGCGTGGTGAGTTAATTTAGTTCGAG
ATTTGTTTCCACTTTTAATAGTTTTCTAAAGCCCCTCTGATAACAAACTC
GAAGCCAGGCCCTTAGTTCGTTAACGCTCATGATAGTACCACGTccatca
acaaaataaaaaacaactggCTACGAAATTGCTCAACGTTCCACTGCGTG
TCAATTTTCTCATCGAATTTGTTATTCTAGGCTCAAGGTTTAGAGGCATC
CATATCCGATATTCTTCAACCCTGAGTAATACCCCCGCAAACCCAAGGTT
ATTTGTAATTTCATCATCAAATCTTTAAATTCAAAGGGCCATTAACTAAT
ATCAGGGGGGGTGTTAATATttcaacacccctgtctcacagccccggtgg
aacatCTTCCCACAGTAGATGacaatttctatcgaaatcccaatgggaat
tATAATTCTATGTTCCCAGGTCAAGTCCAGAGGGGATAGTTATGGAGTAC
AATCTCTTTTGATGCTTTTTCCATAGTTATTTTTAAATGGGCGTAGTGGT
GTAGTGGTTACCGTGcttgacttctgtccaggaggctCGAGTTTGATACC
CACTgtggcactacgattcacttggcaagtgaatgctccttcgcccgggt
caacccatgccatgcgaggggaattgggtaccataactctgatacaagag
tatgggtagatattccagacattgtggtgtgccgAGACACTtaggaggtt
ctacacctgcgaggacatccGTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNctcgcatctgcagggttgcaat
gtctgcttgcgctgtgattcctactccaccgtgggtaggacccattccga
tgcatcggagggcatatctatctatttatctatttttaaatgGGGGTAAG
AACACTGTCAATTTTCCAGTgcggctgaaattgtagggtatttttctcaC
CGGTGacgaaatttcagcaaaattttcCAGTGTGTAGTAGGAGTCCAGCT
GGGTGTGTAGCACATGGGTGTATTTCAAATGAAAGCTTCTTCGTTAGCTG
ATAGATTTTCCTTGATCGTCGGAGTAGGACTCCTCTACTACAAACATAAT
AGCCAGTCCACCTAAATAGTGTGAGATAAAGAAATTTAATTAGCcactga
gtttgaaattttgcatggTTCAAACTCTTCCCTTAGAGCATAGTCATTAT
ACAGGGTGttcctaattaaagtatcgagtcgaaacacagctatgagtaga
aagttttatgtgcgtgttcacaaaattgtattttaagctctccctttttt
ttctttgccattacgattaatttatacgttgtaactaccttttgtaataa
gcctgtgtgatggagaacgttcttatattttagcgataacacacacaaac
ttttctactcaatcgcatgttcaaactcgatactttaattagagACACCC
TGTATAAAACTCTGGTCtagcaatgtattgttttaacttttttgtcaaat
tttcctttgttatgaataaaaggcaagttgcgatttgcatactttttaaT
CACGTTTCCAAATACtactcttgggattggtctaatttctaatcacatga
tcaaaaatcTATGCAAAACAAGACGATTTGCGAACGCAAGCTCTAACtgt
taacaaaagaattaaacaaAAGCTTTCCAGTCTGGAAATTCCAGACCGGG
GATTTTTATATTGACTATGCTTAGAGTAAGTCGGAAAAGCTGGTTATCTC
ATTCCATTTTCGATAGCATAGCAGCTACAATATCATTAtcgtaatatttg
aaaaaaaaggaaattatcTAGAAATGTTAgtcacaaacaatttggaagtc
aaacatggtccaataaggctcagaatatagcctggaagttgATAAACCca
tcccgaattgaaatattcgattacagTAAATTGAACAGATAGAGATAGTC
CAAAAGTgactttttcgcccgaacttcTAATTTCAAAAAACGAGGGAATG
ACCAAAATTCTCGCAGATTATGGTGGGTTTTCCTTTAAAGCAGTAATCTT
GATTATTTCTCTAAAGGGCGTAACGAGCTAGCAAGACAAGTTCCAGAGTC
AACTGTTTGGCTCTTAGTCTTACTACGGGCCTACTACATGCTTTGGTTTT
TTCTATTCTTGGTAAACCTTCGGCTTATGATAAGATTGACCCTGCTATGA
CAAGAATGGCCCTGCTAGATTGACCATTCATGCATCTTCGATTGATCAGT
GTTTGCATTGATGTCAAGCGAGGTCATTCATTGTGTATGTGAAGTTAAAT
TGAATGCGAAACTCgcagaaaaatattgcactactttctttcttttgaca
GTTTGACTGTGCTATAAAAGATGACTATTGTATTGCTGTAATACAAAACT
TATAGAGGTGTTATTTATATCcggaaaaagttaaatatttaaGAGATGAT
TGTAATCTTTTGACCGTTTTTAGGACTGATAGGTTTACTTTTCCCACTTA
ATTGAAAAAGTGGAGAAAATCAATATTTAGAAGGAACTAGCAATCTACTG
CTTTACTACTATAATAGACCATCGTATTTTACCGACTAAATTTTTGATAA
CAAATACAATCAAGCAAGATTCAAGAAGAAGTCCTCTATTTGCTTGGTAT
TGATATTACAGGGGAATctgtattcaatttttcacgtACGGTGGTGGCTT
TCCTATCATAGCgagcttacacgttttttttattagaatctagtttaaga
acattttaggcagataatcgctaaaaaataagcacatccaggctcagtca
aattttaggtgttctaatgaaaaaaaacgtgtattacacCTGCGCTATCC
AGTCTTCAGTTAATAGCTTCACAACAATTTAACTGCAAGTTAAACAGTTC
AAAAAGTAAGTaatcttgaaaattaaaattaaattttagcgACAGAACAT
GCTTTTTCTGTTTTCGGGACCATTCATGGGTACGGTACTCGACAGCACTG
ATGATATCGTCATCTCAACCTATCTCAACCGTGGAATTTAGGTACTAGCA
TATAATAAAAGGGTGTTAGCAGGTACATACAGAATCACCAGGGAGGCGTG
TCACTTACAATCACTCACTTCACGCAAGACAGCTCGCTTCCACGCGCGTG
TATAATAAAGACCAGAAAAAGTAAGCGACCGCAAAATCATGTTGTGTTAC
GACTTGCGAATTTGcatttcgcaaaaaaaaaaacacgttttttgGTGAGG
ATCTAAATCTTATTAGAGGAGAAATTCCTTTTCCAATATATTTGTGCTTA
GGATTGACTCTTTATTgtatctttttctcaaaaaaatcacaatgtTTTCT
CTCGAGTTTTATTAGTGCGGatgtttgatatttttctttctgttaaACTT
TTTATTTACGAAGCGACGGGGAGCTTTGTTTTTCCAGCCTCGAGTTGGTG
AGTTTCGCGCTTTTCAGGGGTTTAGAATACAACAAGAAATGACCTCTTTT
GTTTCGTTTAGTACTTAagtcatgaaaaaaatttttttttcataacgaAA
TTTTTATTAACGAAGATTTGATGTCATAGAAGAATCATATTAATATTTAA
GAGAGGcaagaaagaaatatttttgtatgcGCTGACCCCCGTCTCAAATC
AGTGTTCTTCTACTAACAAATCAAGCTGGCGAGAATTTCTGATCACTCAC
AAAATACCTTGCCTCTTGACAGGACGACACAAGACGAACACGAGACTAAC
TCCAAAAAGGCAAGGTTGTATAATTCAACAACACAGAATTCATCTAACCA
ACTCATAACAAATTCAACTACCACAACAGCAGCAAGAAAAATGAATGTTC
CAGACGAGCTCACCGCTACAGAATACTTGAATCAGCTATTGCAAGACAAA
ACTACTGTCTCAAAAATGCCGAAGATCTTTTTGCATTCTGAAAGACTTCT
AGATGAAGGTGAGTTAGCTGTGATTACTCTTTTGATTCTAgtaaaacctt
ttgaaaaatgtCCCTGACAAAATGCCCATTGTCTAAGAAAGCTGATTAAA
ATCAATCTCTTTTTCGACAGACAACTTCCTTAAGGTTATTTAATTAATTT
TGTAGTAAGAGGTTTACCATAATGACGTAGAAATTACATCTCTCTGCATA
CTGCAAGCATGTTTTTGTCAGCAGCTTGATTAAAAATGTCTGTTTTGACT
TTTGATTTATATTagatatcaatgttttgattcaatttttcaatattcaT
AACATTGTTTGTagtttttgtaataaaaatttgaatatttcttaGAAGAG
CTACATGTTATATCCTGATTTTGTTCGATTTGGGTTATTTCCTTTTACTA
TCACTTATTATTGATACACaccttttttatagaaattagTCGTGTACGAA
ATGACATATTTTGCCCGTCAAGCTTCTTGATGTCACTGCCAAAACCCTCT
GGACCTCCTGTGAAGTTAACTGAAAAAGTTTATGCAAAAGTCAAAGATCA
CCCTAAAGTAAGTAAATATTGTAGTGTTTCATTGTGCCAGTTCTAATATT
GATCAGGCCCCATTTCAAATACCCCTGTTGAAGTGGGTTGAAATTAACAT
ATGAAATTTCTTTCCGGCCATTATGGAACACGTGGTGAAGGAGTGAGTGC
TCTTGAGAAAATGTAAGTCACCATTGACGGCCTAAATAAAGTGATGTGAG
TAAAATTGAGCTTTTCAAATGCTAGAAATAGTTGTTGCCCAACTCTGTTG
TTTCAGATATTGTCTGAAAATACTTTTCCCATGTAAATTGCTAAAAATTT
CCCCGGAAAAGTCGATTGTGCGCTGTAGAGGGATTAATCATCAAAATTCT
ATTCACACTGATAGTGATAACATAGCCTTTCATAATATAGCCTTTCATAA
TTCAGATTACTTCTGCAAGAACTGTTAGCGGTAAAATAATGATCAGTCCG
AATTCTTAAAAGGCAGGGTTGCGTCCCCTAAGCTTTATCCAGGCTAATTT
TTTGGATATGAATGTAACATTTCTTTATTCtataaatttcatgttttatt
ttaAGTTCAACTTTGTTGGTCGTATTATTGGTCCACGTGGTCTCACCTTA
CGTCAAGTTGAGCAAGAAACAGGAGGGAAGCTTCTTGTTAGAGGAAGAGG
TTCAATGAAAGACAAGAAAGTGGAGGAAGAAAAACGTGGACAACCAAACT
ATGAGCATTTGGATGAGGATCTTCATGTTTTGATAATGGTTGAAGATACT
GAAGATCGTGCTcgaatgaaattgaaaaaagctgTTGAAGAAGTTAACTT
CCTCCTTACACCTCCAgtaagaaaattatgtttttgaatttGGAATCATT
ATATACCAAACAAATCTCAAGTGCTCTAAAATTCTTTGCATATAAGTTGA
TATGCATTCAGCAACTTTGTTTATGTGTTTTACAGGCAGTACAGGGTATT
TGAGTAAGGGAGCTCAATTTTGTTTTCCTCATAATTTCAGAAAGACGGAG
AAGATGCGATAAAAAAGAAGCAACTTCAGGATCTTGCAATTTTAAATGGT
ACTTACAGACACCCCAACAGTGAGGCAAGCCCTCCTGCTGCTGCCACAGT
CACTCAAAATGGTGGTAAGCAatgttttcaattattttgaagttaatatg
ataattatgaaaaatcaaACCCCAAGCAGATCAGGCTATTTTTGTTTCCT
CTTCTGACCTGGtaagatgttttgtttttaccCAGAACTCCTTTTTATCC
GGGTGGAACATTTTGAATAAGAGGATAagtttttactttaaaattttgaa
aatttttctttcagtatCTCCAACTGGGCTGTTAAGTTTTCCGAGTCCTT
CACCAGTCGTTCCACAAAACAATACATCATTTCCAGCCATCCGAAACTCA
GCAGGTGAGCCTGTTCATTACGACAAcatgattttccgattttgtgATTT
CGGTATAAATCCAACAGTGCCTACACAACAACATCCATCTTCGCGATCGT
TCGGTTGTTGCTCTCCAACTGTGTTTTAAGGAATCTTTTTGTGCAATGTG
TTACATCAGGGTGgactttttgagtttggttttcaaatttgaaatttaat
tatGTGTGGTGTATTAAACCTAAACTTCAAAGTTTGCTACTAATCACTAG
aacttttttaacattttggtaATTTGAATGGTGCATTATAAATGTCAATA
AGAATTTATGAAGGGATAACTAATAATTTATTGCAATAACCAAAATTAAC
TCTAAATTATAAAATCAGCATAACATTTTTGAGTTCTTAACAAAACTAAA
GACATTAGTTGTATATAGTTGGACTGGACCTTATCAACTTTTGTGGAACC
TCCAATAAAACTAAAAAGCTACTGACCATAATGTTAAACAACTTTACCAA
ATAAAACTATTTGTCTGAATCTAATTTGATTTCAGCAGCTGCACTGCAAG
GCTTATATCCTCTTGAAACTTTCGCTCAAAGAGGCACACCGGGTGCTTCG
TTTCTGGATTTTACCAATCTGGATGGCAGCTCGCTAATTTTGAGTAAAAG
ATGATAATTCATTCCAAACCGGCTGTAACAACTACtgtccaaaaatttaa
aaactgttttgttgtgatttggtttatgtttttttattgcGATATtcgca
aaataaatttcaaattaaatttttgtaaatccAATTTTATTGTATGATAA
TTTTATACGTTTGAAGTTTAGTTCAAGATTAATCTTGATACTAATTTTAA
CTTATATTTAATATAAATAACACATAAACGCTATTTTTACTAACTATTTA
CTTTTTTACcatttaataataataaaatactcAAATTGTGTCTTTTTTAA
CGACGTTTAAAATGATAAATTGGAAAACTTGTATTTACTATTTATTCtgc
aatttttatattttttaaactaactttcattattttgttattttttgaaa
gCAATCTTGAGGAAACTGCATACATTTTAGGGCAAGAAGGGTTCAACACT
TACagtacattacattacattctTTATGCAAGTTTCAGAAATCCcttgcc
ttaaaaaatcttgaatttttccTGTGGATagtattatttttaaaaaacag
aTTTCTCTGAATAATGTAGTAGAACTtactattttcatttcaataatatt
ttatttgacGCTCAAAAGTAAAGAATTTTATAGAAATATGAAGAAGTTta
tgaatttgataaaaaacaaaaattctaaCAACTCATGCTAAGAAAGGTCA
TGACATTTCAACATGGAACCGACCATGAAATGCTActaataacaacaaca
acagaaatGTATTGACCCAGAATAAACCCTGCTAACATCACGACTACTTA
TGTCATCCAACCAATCAACTGAAGAGAGAATTATTACAGAAAACTGagca
attttattattttatatgaAGATACTTTTaggtatttatttatttagcat
AGATTATGTgaagagaaataaagaaaaaatgaattttaaaatatttttg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012455XLOC_012455Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022213-exon-sc0000408-1491911889:176230..176459TCONS_00022213-exon-sc0000408-1491911889:176230..176459Clytia hemisphaericaexon
TCONS_00022213-exon-sc0000408-1510915933:176230..176459TCONS_00022213-exon-sc0000408-1510915933:176230..176459Clytia hemisphaericaexon
TCONS_00022213-exon-sc0000408-1575043694:176230..176459TCONS_00022213-exon-sc0000408-1575043694:176230..176459Clytia hemisphaericaexon
TCONS_00022213-exon-sc0000408-1491911889:180302..180537TCONS_00022213-exon-sc0000408-1491911889:180302..180537Clytia hemisphaericaexon
TCONS_00022213-exon-sc0000408-1510915933:180302..180537TCONS_00022213-exon-sc0000408-1510915933:180302..180537Clytia hemisphaericaexon
TCONS_00022213-exon-sc0000408-1575043694:180302..180537TCONS_00022213-exon-sc0000408-1575043694:180302..180537Clytia hemisphaericaexon
TCONS_00022213-exon-sc0000408-1491911889:180962..181086TCONS_00022213-exon-sc0000408-1491911889:180962..181086Clytia hemisphaericaexon
TCONS_00022213-exon-sc0000408-1510915933:180962..181086TCONS_00022213-exon-sc0000408-1510915933:180962..181086Clytia hemisphaericaexon
TCONS_00022213-exon-sc0000408-1575043694:180962..181086TCONS_00022213-exon-sc0000408-1575043694:180962..181086Clytia hemisphaericaexon
TCONS_00022213-exon-sc0000408-1491911889:181635..181895TCONS_00022213-exon-sc0000408-1491911889:181635..181895Clytia hemisphaericaexon
TCONS_00022213-exon-sc0000408-1510915933:181635..181895TCONS_00022213-exon-sc0000408-1510915933:181635..181895Clytia hemisphaericaexon
TCONS_00022213-exon-sc0000408-1575043694:181635..181895TCONS_00022213-exon-sc0000408-1575043694:181635..181895Clytia hemisphaericaexon
TCONS_00022213-exon-sc0000408-1491911889:182070..182193TCONS_00022213-exon-sc0000408-1491911889:182070..182193Clytia hemisphaericaexon
TCONS_00022213-exon-sc0000408-1510915933:182070..182193TCONS_00022213-exon-sc0000408-1510915933:182070..182193Clytia hemisphaericaexon
TCONS_00022213-exon-sc0000408-1575043694:182070..182193TCONS_00022213-exon-sc0000408-1575043694:182070..182193Clytia hemisphaericaexon
TCONS_00022213-exon-sc0000408-1491911889:182394..182483TCONS_00022213-exon-sc0000408-1491911889:182394..182483Clytia hemisphaericaexon
TCONS_00022213-exon-sc0000408-1510915933:182394..182483TCONS_00022213-exon-sc0000408-1510915933:182394..182483Clytia hemisphaericaexon
TCONS_00022213-exon-sc0000408-1575043694:182394..182483TCONS_00022213-exon-sc0000408-1575043694:182394..182483Clytia hemisphaericaexon
TCONS_00022213-exon-sc0000408-1491911889:183015..184078TCONS_00022213-exon-sc0000408-1491911889:183015..184078Clytia hemisphaericaexon
TCONS_00022213-exon-sc0000408-1510915933:183015..184078TCONS_00022213-exon-sc0000408-1510915933:183015..184078Clytia hemisphaericaexon
TCONS_00022213-exon-sc0000408-1575043694:183015..184078TCONS_00022213-exon-sc0000408-1575043694:183015..184078Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000408supercontigsc0000408:176230..184078 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.0834706	0.980507	0.634123	2.70484	4.01221	0.760577	0.486827	0.835612	0.229754	1.01707	2.05192	0.854699	0.397596	2.14575	1.08782	1.10155	2.44984	0.247456	0.102457	0.333064	0.693012	6.11962	7.19219	0	0	0	0
Blast
[Close]
BLAST of TCONS_00022213 vs. Swiss-Prot (Human)
Match: QKI (Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 3.069e-66
Identity = 113/193 (58.55%), Postives = 142/193 (73.58%), Query Frame = 1 
Query:  379 EYLNQLLQDKTTVSKMPK---IFLHSERLLDEEISRVRNDIF------CPSSFLMSLPKPSGPPVKLTEKVYAKVKDHPKFNFVGRIIGPRGLTLRQVEQETGGKLLVRGRGSMKDKKVEEEKRGQPNYEHLDEDLHVLIMVEDTEDRARMKLKKAVEEVNFLLTPPKDGEDAIKKKQLQDLAILNGTYRHPN 930
            +YL QL+ DK  +S +P    IF H ERLLDEEISRVR D++              LP   GP V+L EK+Y  VK++P FNFVGRI+GPRGLT +Q+E ETG K++VRG+GSM+DKK EE+ RG+PN+EHL+EDLHVLI VED ++RA +KLK+AVEEV  LL P  +GED++KK QL +LAILNGTYR  N
Sbjct:   16 DYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRDAN 208
The following BLAST results are available for this feature:
BLAST of TCONS_00022213 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
QKI3.069e-6658.55Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1[more]
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