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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022282 ID=TCONS_00022282|Name=TCONS_00022282|organism=Clytia hemisphaerica|type=transcript|length=1115bp
GATGACCATCAGGTTCAAAAATTTGCTTATTCTCGTTCACAACTGCATTG
ACTTCGTCTAAATTGAGCTTTAGTACATATGAGCCATcaagtttcaaatc
attttcttcCGATCTAAATGGGTAAAGCAACATTAGAAtatggtgggaaa
atttttctgggtgATTGNTCTGATCTAAATGGGTAAAACAACATTAGAAT
ATGGTGGGAAATTTTTTCtgggtgtttttttttgttaggAGTGTAGTACC
TCAAAACTTTTGGAACTTTACGAAGCTTGAGTTTTTCCTTGctgttgagt
aatttggctgatTTTGGAAGTGTTTGGGGTTCTTCATGATTCACTGCACA
TCTAGTACAgtaattttcatcatttgtattttttcttgTGTCTAATGTAT
AGTTTGCACAGAATGTGGCAAAACACATAGTATTAAATTGTCCTGTGTTT
GGGCGGTCAATATATCTGTTTAACatatttcgtttgaaaagatCATCAGA
ATCCTCAGCCAATTcctcaatttcttcttttgacttgaaaattctGTACC
TTTGATCAGGTAAGTTAGTGTTTACGAATGAAATAGCAGGAAAGCATTTT
CTAAGCCACAGTTCAGGCATTGTTAAGTAAACTACTTCCTGGATTGAGCA
TTCTCTATTAGAGTTgtaaattttggcaattttagaCATTTTCTCAAACT
GACTGTCATTTGAATCTTTGGCCTGCTTCAATGCTTCTTGCTTTGCAGTT
GAACACTtatcttcactttttgaaaaataggcaCACATGTATGTAACTGC
CTTGTATGCATTGAACACTGGTTGGATATCGATATTGGCCTCCCATGCTA
GGAGGCCTTCTGCAAAATAATTGTTGACAAAACAAGAATATGGGTCACGT
TTTAGAAACAAATGTTGATCTTTGTCTGATGAGATTGATAAGTAATATTC
ATACGTTTCATAATTTAACCCTAAAGACTTCAAAATTGTATCAATAGATC
CAATTTCAATATACTCAGGCTTATCAGGATccaaaatgtttctcttttta
gGATGCAAATTTGTATCCATAAATTCTTGAACAGTTTGGATCACATTATT
TCTAGCAACCAAAAT Run BLAST on NCBI protein sequence of TCONS_00022282-protein >TCONS_00022282-protein ID=TCONS_00022282-protein|Name=TCONS_00022282-protein|organism=Clytia hemisphaerica|type=polypeptide|length=333bp
ILVARNNVIQTVQEFMDTNLHPKKRNILDPDKPEYIEIGSIDTILKSLGL
NYETYEYYLSISSDKDQHLFLKRDPYSCFVNNYFAEGLLAWEANIDIQPV
FNAYKAVTYMCAYFSKSEDKCSTAKQEALKQAKDSNDSQFEKMSKIAKIY
NSNRECSIQEVVYLTMPELWLRKCFPAISFVNTNLPDQRYRIFKSKEEIE
ELAEDSDDLFKRNMLNRYIDRPNTGQFNTMCFATFCANYTLDTRKNTNDE
NYCTRCAVNHEEPQTLPKSAKLLNSKEKLKLRKVPKVLRYYTPNKKKHPE
KISHHILMLFYPFRSXQSPRKIFPPYSNVALPI Run BLAST on NCBI transcript from alignment at sc0000410:17691..18805 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022282 ID=TCONS_00022282|Name=TCONS_00022282|organism=Clytia hemisphaerica|type=transcript|length=1115bp|location=Sequence derived from alignment at sc0000410:17691..18805 (Clytia hemisphaerica)
ATTTTGGTTGCTAGAAATAATGTGATCCAAACTGTTCAAGAATTTATGGA
TACAAATTTGCATCctaaaaagagaaacattttggATCCTGATAAGCCTG
AGTATATTGAAATTGGATCTATTGATACAATTTTGAAGTCTTTAGGGTTA
AATTATGAAACGTATGAATATTACTTATCAATCTCATCAGACAAAGATCA
ACATTTGTTTCTAAAACGTGACCCATATTCTTGTTTTGTCAACAATTATT
TTGCAGAAGGCCTCCTAGCATGGGAGGCCAATATCGATATCCAACCAGTG
TTCAATGCATACAAGGCAGTTACATACATGTGtgcctatttttcaaaaag
tgaagataAGTGTTCAACTGCAAAGCAAGAAGCATTGAAGCAGGCCAAAG
ATTCAAATGACAGTCAGTTTGAGAAAATGtctaaaattgccaaaatttac
AACTCTAATAGAGAATGCTCAATCCAGGAAGTAGTTTACTTAACAATGCC
TGAACTGTGGCTTAGAAAATGCTTTCCTGCTATTTCATTCGTAAACACTA
ACTTACCTGATCAAAGGTACagaattttcaagtcaaaagaagaaattgag
gAATTGGCTGAGGATTCTGATGatcttttcaaacgaaatatGTTAAACAG
ATATATTGACCGCCCAAACACAGGACAATTTAATACTATGTGTTTTGCCA
CATTCTGTGCAAACTATACATTAGACAcaagaaaaaatacaaatgatgaa
aattacTGTACTAGATGTGCAGTGAATCATGAAGAACCCCAAACACTTCC
AAAatcagccaaattactcaacagCAAGGAAAAACTCAAGCTTCGTAAAG
TTCCAAAAGTTTTGAGGTACTACACTcctaacaaaaaaaaacacccaGAA
AAAATTTCCCACCATATTCTAATGTTGTTTTACCCATTTAGATCAGANCA
ATcacccagaaaaattttcccaccataTTCTAATGTTGCTTTACCCATTT
AGATCGgaagaaaatgatttgaaacttgATGGCTCATATGTACTAAAGCT
CAATTTAGACGAAGTCAATGCAGTTGTGAACGAGAATAAGCAAATTTTTG
AACCTGATGGTCATC Coding sequence (CDS) from alignment at sc0000410:17691..18805 >TCONS_00022282 ID=TCONS_00022282|Name=TCONS_00022282|organism=Clytia hemisphaerica|type=CDS|length=1002bp|location=Sequence derived from alignment at sc0000410:17691..18805 (Clytia hemisphaerica)
ATTTTGGTTGCTAGAAATAATGTGATCCAAACTGTTCAAGAATTTATGGA
TACAAATTTGCATCctaaaaagagaaacattttggATCCTGATAAGCCTG
AGTATATTGAAATTGGATCTATTGATACAATTTTGAAGTCTTTAGGGTTA
AATTATGAAACGTATGAATATTACTTATCAATCTCATCAGACAAAGATCA
ACATTTGTTTCTAAAACGTGACCCATATTCTTGTTTTGTCAACAATTATT
TTGCAGAAGGCCTCCTAGCATGGGAGGCCAATATCGATATCCAACCAGTG
TTCAATGCATACAAGGCAGTTACATACATGTGtgcctatttttcaaaaag
tgaagataAGTGTTCAACTGCAAAGCAAGAAGCATTGAAGCAGGCCAAAG
ATTCAAATGACAGTCAGTTTGAGAAAATGtctaaaattgccaaaatttac
AACTCTAATAGAGAATGCTCAATCCAGGAAGTAGTTTACTTAACAATGCC
TGAACTGTGGCTTAGAAAATGCTTTCCTGCTATTTCATTCGTAAACACTA
ACTTACCTGATCAAAGGTACagaattttcaagtcaaaagaagaaattgag
gAATTGGCTGAGGATTCTGATGatcttttcaaacgaaatatGTTAAACAG
ATATATTGACCGCCCAAACACAGGACAATTTAATACTATGTGTTTTGCCA
CATTCTGTGCAAACTATACATTAGACAcaagaaaaaatacaaatgatgaa
aattacTGTACTAGATGTGCAGTGAATCATGAAGAACCCCAAACACTTCC
AAAatcagccaaattactcaacagCAAGGAAAAACTCAAGCTTCGTAAAG
TTCCAAAAGTTTTGAGGTACTACACTcctaacaaaaaaaaacacccaGAA
AAAATTTCCCACCATATTCTAATGTTGTTTTACCCATTTAGATCAGANCA
ATcacccagaaaaattttcccaccataTTCTAATGTTGCTTTACCCATTT
AG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022282-exon-sc0000410-1491911889:17691..18805 | TCONS_00022282-exon-sc0000410-1491911889:17691..18805 | Clytia hemisphaerica | exon |
| TCONS_00022282-exon-sc0000410-1510915933:17691..18805 | TCONS_00022282-exon-sc0000410-1510915933:17691..18805 | Clytia hemisphaerica | exon |
| TCONS_00022282-exon-sc0000410-1575043694:17691..18805 | TCONS_00022282-exon-sc0000410-1575043694:17691..18805 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000410 | supercontig | sc0000410:17691..18805 . |
Blast
The following BLAST results are available for this feature:
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