|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022301 ID=TCONS_00022301|Name=TCONS_00022301|organism=Clytia hemisphaerica|type=transcript|length=2343bp
CTTTCGGGTTTTCTCGACGTACcattttatcagatttttttgggaaaaaa
gttgtatacttttttaaaCTCAAACCATCGAAAACAGTTTATCGTCACAT
ATGTCCCATTAGCTGATTGTTTTATGCAGGATGTATCTGTAAAAGGTCTA
CAATGTCTTCAGCAGATGAGTTACCAGCTGGCCTGGTCAATTTCTTCATC
TACAATATCGAGTATGGACAACGAGAAGGGACAGAAGAAGAGAAAGTCAT
GTTTTATACACCGACTGAAGTTCCATTAGGTAAACAGATCAATGCTGTTG
GTTTATGTCAAGCTATTGCTCAATTCGTCAACGGTTTCGATCCTTCCCAC
CCATGTGAATGTCTGATCACATTGAAAACCAAACAATATTTCATGAACCC
TGAGAGTAGTTTTTGGATGGTTATGACACTGGCTATTCCTTGTTCAGAGA
AAGTGAGCAGGGAGAAAAAAGTATTGGAATATCACCCAGATAACGTGCAA
GACAATTTAGGGAAAGCTATTCTCAAGCAGACTTATGAcatgtttgtttt
gtttaatGGTCCTTTCGAAGCTTTCGTTGACAAGCATGGTGTAGAAGCGC
TGAAAGAACAGTTCAAATTATTTTACTATCGATACTTACAGACCATCAAC
ATTCGACAAATGGATATTTTAGATGTTTTCAAAGGAATCGATTATTTACC
CTTAGAGAAAGTGGATTTTTTACGTGTTCAATGTTTTGTTAACCTTGTTG
AGAACACTTTCTCGGGCATACACCACGTCTGTTTCTTACATAACGAAAAT
GTTGTATGGACAACCCTTCAACTGGACGACATGAAGATCCTATACAAATA
TCTCAAATCTCGATTATTCCCTGCTTCAAATGAAATGGAGCAAGGCTTGA
CGCGTAGTTCACCTGTATCGACAGCAAGAACATCGCCATCCACCAACTAC
AACCCGAACTTTCTCAACCCGGGAAAATTCTTAACGGCTCCCAGAGATTT
GGTTTCATCGAGTCCTTACACCAGACTTGCTCCTCGTATTTTCGTACAAC
TGAACGGAAAAGTGACAGAACTCTATCTGGTGATCTACAAAGCGCATAAT
TCAGTCATGTGTTTCCTTATGGATAGCCAATCAGCAAACGCAGATTATTG
TACTCGCATCCATAATTTCGTTGGGCCGCAACTAGGGAATTTATCGAACA
TCATATCTGAACAACATTCGAAACGTATTTTACAAACGAACAACCAATAT
CGTTTTGTTTATTTCAACTCCATGAATCTAGCCATCCGAACATCCATTCA
CAAAACGAAACTATCCAACCAGAATTCGAACGGAGTGTCTCCGGAAATCA
TGAAACTTTTGATCGATATTCATAAAGATATCGAGTTATCCAAAAACACC
TCTTGTGAAATTGCTACCAAAATGATGAACGATTGCTGGGTTGTCGGTAA
ACGGTCGGGATTCCGACaattttttgtcgtttttaatCAGAAAAACTGGA
CTATTGTAGAAATTTGCGAGGAATTACAACGATTGATGAATACGGGCTTT
GGGAATATTCTCTTTTTGgagtaaaatgaaaataaaaattgaaaatacaa
tcaaaattttaggttgatttttttattttagtatgttttaaatttagcat
cttcatttttttacaaaaaaaacgaatagtttgaaagaaaattgaagata
gAACGTAAGATTATGAGGATTTTTCTTCTCTTCACTTATTACAAATAact
attgattttttttgaataactttcaGCCTGATACTTTACTTGTTACTTTA
GTTCTGACTGGGAGAAAGGACAGCTTTcttttttgcagaattttgtgaCT
TATCTTTTTGATAACAATTATTTTGCTTGTGCCCATGCTTGTAAACGTTT
CAGTTTCTTATCGTAGTTTTCTTTCTCATATAAAAAGTAATACTGCTCTG
AAAGCCTTTGAGAAATTCGTTGAACGTCGGAAAAGCTTCTCTCTGGTTTA
TTTCCAGCTTTTACTTTCACCCATTTCATTAGGTAAGTGATCTTTCATAT
TGCTTCCGTTTGAATCTAGAGGTTCAATACAAATCAGTTTTCACCCGACT
TGGAAAGTATAATTTTAAtcttggcaaaaaaaaaaactttttaaagataa
gatcgtacaaatacatttcaaaataaagtttGAAAGCAAAAAATCCTTCT
TTAGACAAAGAGACAGCAAATCAAACTGACGCAATTTAATTtggataaaa
tattttattaggTAAATTATTTTTGGAATCATTACTGTGGAAATAATGag
tagattttaatttttttaaattgtgtaATGAACttgttttgac Run BLAST on NCBI protein sequence of TCONS_00022301-protein >TCONS_00022301-protein ID=TCONS_00022301-protein|Name=TCONS_00022301-protein|organism=Clytia hemisphaerica|type=polypeptide|length=473bp
MSSADELPAGLVNFFIYNIEYGQREGTEEEKVMFYTPTEVPLGKQINAVG
LCQAIAQFVNGFDPSHPCECLITLKTKQYFMNPESSFWMVMTLAIPCSEK
VSREKKVLEYHPDNVQDNLGKAILKQTYDMFVLFNGPFEAFVDKHGVEAL
KEQFKLFYYRYLQTINIRQMDILDVFKGIDYLPLEKVDFLRVQCFVNLVE
NTFSGIHHVCFLHNENVVWTTLQLDDMKILYKYLKSRLFPASNEMEQGLT
RSSPVSTARTSPSTNYNPNFLNPGKFLTAPRDLVSSSPYTRLAPRIFVQL
NGKVTELYLVIYKAHNSVMCFLMDSQSANADYCTRIHNFVGPQLGNLSNI
ISEQHSKRILQTNNQYRFVYFNSMNLAIRTSIHKTKLSNQNSNGVSPEIM
KLLIDIHKDIELSKNTSCEIATKMMNDCWVVGKRSGFRQFFVVFNQKNWT
IVEICEELQRLMNTGFGNILFLE Run BLAST on NCBI transcript from alignment at sc0000411:227223..234517+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022301 ID=TCONS_00022301|Name=TCONS_00022301|organism=Clytia hemisphaerica|type=transcript|length=7295bp|location=Sequence derived from alignment at sc0000411:227223..234517+ (Clytia hemisphaerica)
CTTTCGGGTTTTCTCGACGTACcattttatcagatttttttgggaaaaaa
gttgtatacttttttaaaCTCAAACCATCGAAAACAGTTTATCGTCACAT
ATGTCCCATTAGCTGATTGTTTTATGCAGGTGAGTGGTTTCTTTTTACCC
CCTGGGTTCTAGGAGTTTCTCACAGACCATCAGCCTAGACTAAAACTCCT
ACTCCTAGCTGAAGACTGAAGTTCAGGTGAACTTGTTGCTACAATCtccc
tcgaaatatattgagattttagtgtattttaacgtttttcagaatttaaa
gttcgggcgagaattgctattttagcacttccactttcttccattcaatg
tttcgattttagaggggtttggtggcttctaggctatattccaagcctca
ttcgagcaaattttagcttttaaatcctgagatcctaagctcctaagtct
taagtctcatgttaaaactcagagttaaaactctactttccaactgtagt
ttaaggcgcctaaaaatcaattgtggtgttcaaaattacaccgggaactc
ccctttgtctcaaatatttcttgaaggattgtagCATATGCTTGCACCAG
TCAGTCAGTGTGGAGAgaaaacttgcatagccatcaaatgactacCGATC
AAAGCAGCAAAACTTCAATacaaatgaactatgcagctctgctcgcagct
ctactctaccatttttgttttgatttaccgtcgactgctctaacttggga
ttaTCCGACAAAACatatgggacggcaattcggccaccatttcaacgacc
ctgcctatgccccggacagtctggggcaaatgtctggggtctgaaaaaaa
tacgtccggggctccaatttttgcgccataaatttaccccggacgtatat
cgCCGAGCACACTTTAAACCCCCGGACATATAAACTAGGCAAggttaata
aattaattaaaaataaaaaaactaactttacttacctttctctgtctgat
aggatccatttttcagctttcggttagattttagaatttgattgCTGAAC
AAACCACGCTTGAGATTTAAGGTTCAAATACAGGCCTCGCACACGAAACG
CCAAAATTAGgacattacaagatcttttggaagacggcgtttgtccacgg
aagaatatttcaatgaattagaaaaaagcccgcgcggtcagcgattctat
aaaaagcgaccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNaggctgtctggggcgtccggggt
agtctctcaaaaacaaataatacggaccccgggcacgcatcaaaaaaacc
ccggactgtccggggcataggcagggtcgtccATTTCATTGTattgaacc
tccaaagtcatttgatttgagttaaggaacagcaaatttaaaaatagacc
ttttttcaaagaggccaccctgttgaataattatgtagtccagcagaaaa
acaatgataaaaccatgcataattattacaatatgcatgatacagtattt
atgcatggctctatcattacattgtttttatggctggactacataattat
tcaacaggacatcctctttgaaaaaaggtctatacacgatttctctttcg
attttaggCTGATGAAAATTAATGATATGTTTACCGtaataaagattttc
aaaattcgatgcggccaagttttcattattcattattcaatattttccca
taaacatttatttttaccagatttttcgtttttccttaTAGATACACAAT
CTCCTCTTGTGTCTCCGGAACTCTcgtgtttttattgattcttttggTTC
CCGTTTGTACGAGCTTGAAGAGATAAATCTTTTCTTCCCGCTAGAGAATT
ATATAATGTTATCTCCAcaatatgacaaaattaaattcacacgGTAAAGA
CTACTAGAGGGCTGTTCGGGTTGTTAACAATCTAAAAAAGCcacgggccg
tttgttttgatatcaacttcgaaaatttttgttctctgcTCAAGTGGGAg
gaaaataatgacaacttttcgagaaaatggcaaataatgacaacttgatG
CGGCAGGTTTTTGAACACGCAGGCGGTTTACAgtaaacataacattaaat
tccatcggccttacagtaagtgaaaatacagaccagatatgcaatcAGTC
AGTCacggaaatccttgcattttGCAAGGGTTCGACATGCGGCAAATGCA
ATGGGTCGAAAACGAAAATGACGAAAAAACTCCGTGCAAATACAATCACT
GGGACCCGTTGCATTTacacagaattgaaaaatgttacacttgattataa
aaaaatgcacagatcaaaattttaacccgtagacgaaaattttctaaaaa
ggctAAAGAATCTTCtagagagaaaatgaaaatgccgTTCGTCTTCAATT
TAtgccattttcattttaaagttgagatttgttaattttcacgcattttG
CCTTACACGTTCTAActcatttgcacagggtcgGAAAAAGTCGTTGAAAC
CGTTGCAAATGCACACtccgtgcaaatgcaaggatttctgTGAAGTaagt
cccatgtttcaaccaatcgtcccaagttagagcagttcacggtaattttt
tgttttaaaatgacCAGGCCAGCTTTTTTGGGTCGccaggtttcgaggta
gggtcagtcgggtgacggcaaaccaactattttttaagtccagcctaatg
aaattgaatttgtcacattaCAGTATATTCGCAAGCATCACTGGTCAAAA
TATCGAAACTAATATGAGTCggctgattttttaaaaatacgcACATGCGC
AGTTAAATTTCACATGATTAGCAcaaaataagtgtcttggaaaattggaG
ATCTTGTAATTCTGTTCTGCCTTTGAGATTGGCCTTTTAGTCATATGAAA
ACATTGACTATTCCTCTTCATAAAAAAagggcaatctcaatctcaaaaat
gaccaccacagtaaaacttttaaaatcatttgtggtgtttaaaatacTAC
AGGGAAATCAGGGGATTCATATGCATGCATAGGGATgcctcaaatatttt
gtccaagaTTGAAGCTATTGAAAATATCGGCTTCAACTCAAAGTCCCATA
ATCTTGATATATATCACTGGCTTGGATATTCTTAGGAGAGCAGGTTTGAC
TTTATTTCTGACATAGCATCAACCCTCCCCCCCTAACATACgcccaaaaa
attgcaaactAAAACTAGGAGCTAAAATACAGCCAAATATTTGGGGGAAC
TGATATGTTTGGGGGggtcatagatttataaagctcgaagggctagatgt
aaagtttttgctgaaaagtgtgccgtggttaggtaggaaatcctacctaa
gtcacgtgaaattacaatagaatttcagcgattgaccaatcagaagcttc
attCATCAtggtttttcgaaaacaatagcaacaatgttttttctgatatt
cactttttttgcttggaagagcttaaagcccaacatctagccctttgggc
tttataaatctatgggggGTGGTAAGGAATTTCAATGGCAAGGCTGGGGC
TGACTATTTCTTCTATTgtttttctttacatttttatccaaaaacctttc
attttacagtctattgattctgtttgtttttGGGAATTCAGACGTTTCAT
GCTGCTGGCCGTGTAATCTCAAGTTTTATAATTAAATTAAACTTAATTAT
GCATGACATAACTTATGATTGACTTAGAACGCTTATTTTTACTGATTAag
ctaaatactgtaatttggGCCTTATATTCATAAATTGGCAATAAGCtctc
tctaattctccaatcagcgtcaatttctttgtttattcttcactcaaaaa
aaaataatttaagacTGAATTTACTAACCCATTACTACAGGTGTTTAGGA
TATGATCTCAGACAGGGAGTAGCTCCCTGACCCTAATTCCCCTTTCGGTT
TCTTCTTTCCTAAAATTGAATTAGGAAGAATGACATAGCCCACTGACGTT
GGTTTTATAATTTCGATCTGAAAGATGGCAGAAATGACCAAAAAGCTATC
ACTCTATCAACTTGATTAGAATTTTATtgctctttttaaatcaaagaCAT
TCTGAGGTCAtgcatagtgcggaaaggggtctgacccccccTTCTTGAca
tcccccaacctttaaaaatgcctatcccccaagggttttgggctaaattt
tttatggtaaaaagaagggaaacagtaaagaaagaTTAACTCTGgcaaat
ataataccactttttagtgaaaatactTCCTTTAgtgcagaccaaatttc
ataacagtgctggaaaataatctacaatatttgtaagccccccccttctt
aaaggATCCCCCCtccttgcccccccccctttttttaatgaaaatttctg
acccccccccttcttcacttttttggaaggtgtcatccccctcccttaag
aaagggggtgTCCGAACTATGCATATGAGGCATGAAATAGAGGGCAAATA
AGATATTTCAGGCTTCACTGGTCtgaacagaaaaaaaacaaataataggA
GACTGAAGCTTTTTGCATCTCGTGGGGGTTGTTCGTGAAAagatattatt
ttcttttatagtTTTCTCTTTCCCTGATACATACATAATTTTGCATTATT
ATTAACTATCCAGCTTATTCCTTAGGGGGACTTCTCATTATTATGAGTTC
TACTCTAATGTAATCTCCTAAATAAGGAACCTTAAGCTCAaccaattttt
tgttttattaaaccttaaaaagtttattcTGAGGCATCTGAGATTTTTTC
tctcatattttttcaaaaagctcaAAATCGCAAACTAATTTAAAGAATAC
CAAAAAGTTCACAGTTTTTACCTGTTTCAACTTGTCTATGATATTGAGAC
AAATTTTGGTATACTTAGGGATTTTTCGTATGTATACGAAGTCAAGTCAA
GTTCTAAGTCAAGCTTTCTATCTATTTTCAGGATGTATCTGTAAAAGGTC
TACAATGTCTTCAGCAGATGAGTTACCAGCTGGCCTGGTCAATTTCTTCA
TCTACAATATCGAGTATGGACAACGAGAAGGGACAGAAGAAGAGAAAGTC
ATGTTTTATACACCGACTGAAGTTCCATTAGGTAAACAGATCAATGCTGT
TGGTTTATGTCAAGCTATTGCTCAATTCGTCAACGGTTTCGATCCTTCCC
ACCCATGTGAATGTCTGATCACATTGAAAACCAAACAATATTTCATGAAC
CCTGAGAGTAGTTTTTGGATGGTTATGACACTGGCTATTCCTTGTTCAGA
GAAAGTGAGCAGGGAGAAAAAAGTATTGGAATATCACCCAGATAACGTGC
AAGACAATTTAGGGAAAGCTATTCTCAAGCAGACTTATGAcatgtttgtt
ttgtttaatGGTCCTTTCGAAGCTTTCGTTGACAAGCATGGTGTAGAAGC
GCTGAAAGAACAGTTCAAATTATTTTACTATCGATACTTACAGACCATCA
ACATTCGACAAATGGATATTTTAGATGTTTTCAAAGGAATCGATTATTTA
CCCTTAGAGAAAGTGGATTTTTTACGTGTTCAATGTTTTGTTAACCTTGT
TGAGAACACTTTCTCGGGCATACACCACGTCTGTTTCTTACATAACGAAA
ATGTTGTATGGACAACCCTTCAACTGGACGACATGAAGATCCTATACAAA
TATCTCAAATCTCGATTATTCCCTGCTTCAAATGAAATGGAGCAAGGCTT
GACGCGTAGTTCACCTGTATCGACAGCAAGAACATCGCCATCCACCAACT
ACAACCCGAACTTTCTCAACCCGGGAAAATTCTTAACGGCTCCCAGAGAT
TTGGTTTCATCGAGTCCTTACACCAGACTTGCTCCTCGTATTTTCGTACA
ACTGAACGGAAAAGTGACAGAACTCTATCTGGTGATCTACAAAGCGCATA
ATTCAGTCATGTGTTTCCTTATGGATAGCCAATCAGCAAACGCAGATTAT
TGTACTCGCATCCATAATTTCGTTGGGCCGCAACTAGGGAATTTATCGAA
CATCATATCTGAACAACATTCGAAACGTATTTTACAAACGAACAACCAAT
ATCGTTTTGTTTATTTCAACTCCATGAATCTAGCCATCCGAACATCCATT
CACAAAACGAAACTATCCAACCAGAATTCGAACGGAGTGTCTCCGGAAAT
CATGAAACTTTTGATCGATATTCATAAAGATATCGAGTTATCCAAAAACA
CCTCTTGTGAAATTGCTACCAAAATGATGAACGATTGCTGGGTTGTCGGT
AAACGGTCGGGATTCCGACaattttttgtcgtttttaatCAGAAAAACTG
GACTATTGTAGAAATTTGCGAGGAATTACAACGATTGATGAATACGGGCT
TTGGGAATATTCTCTTTTTGgagtaaaatgaaaataaaaattgaaaatac
aatcaaaattttaggttgatttttttattttagtatgttttaaatttagc
atcttcatttttttacaaaaaaaacgaatagtttgaaagaaaattgaaga
tagAACGTAAGATTATGAGGATTTTTCTTCTCTTCACTTATTACAAATAa
ctattgattttttttgaataactttcaGCCTGATACTTTACTTGTTACTT
TAGTTCTGACTGGGAGAAAGGACAGCTTTcttttttgcagaattttgtga
CTTATCTTTTTGATAACAATTATTTTGCTTGTGCCCATGCTTGTAAACGT
TTCAGTTTCTTATCGTAGTTTTCTTTCTCATATAAAAAGTAATACTGCTC
TGAAAGCCTTTGAGAAATTCGTTGAACGTCGGAAAAGCTTCTCTCTGGTT
TATTTCCAGCTTTTACTTTCACCCATTTCATTAGGTAAGTGATCTTTCAT
ATTGCTTCCGTTTGAATCTAGAGGTTCAATACAAATCAGTTTTCACCCGA
CTTGGAAAGTATAATTTTAAtcttggcaaaaaaaaaaactttttaaagat
aagatcgtacaaatacatttcaaaataaagtttGAAAGCAAAAAATCCTT
CTTTAGACAAAGAGACAGCAAATCAAACTGACGCAATTTAATTtggataa
aatattttattaggTAAATTATTTTTGGAATCATTACTGTGGAAATAATG
agtagattttaatttttttaaattgtgtaATGAACttgttttgac Coding sequence (CDS) from alignment at sc0000411:227223..234517+ >TCONS_00022301 ID=TCONS_00022301|Name=TCONS_00022301|organism=Clytia hemisphaerica|type=CDS|length=1422bp|location=Sequence derived from alignment at sc0000411:227223..234517+ (Clytia hemisphaerica)
ATGTCTTCAGCAGATGAGTTACCAGCTGGCCTGGTCAATTTCTTCATCTA
CAATATCGAGTATGGACAACGAGAAGGGACAGAAGAAGAGAAAGTCATGT
TTTATACACCGACTGAAGTTCCATTAGGTAAACAGATCAATGCTGTTGGT
TTATGTCAAGCTATTGCTCAATTCGTCAACGGTTTCGATCCTTCCCACCC
ATGTGAATGTCTGATCACATTGAAAACCAAACAATATTTCATGAACCCTG
AGAGTAGTTTTTGGATGGTTATGACACTGGCTATTCCTTGTTCAGAGAAA
GTGAGCAGGGAGAAAAAAGTATTGGAATATCACCCAGATAACGTGCAAGA
CAATTTAGGGAAAGCTATTCTCAAGCAGACTTATGAcatgtttgttttgt
ttaatGGTCCTTTCGAAGCTTTCGTTGACAAGCATGGTGTAGAAGCGCTG
AAAGAACAGTTCAAATTATTTTACTATCGATACTTACAGACCATCAACAT
TCGACAAATGGATATTTTAGATGTTTTCAAAGGAATCGATTATTTACCCT
TAGAGAAAGTGGATTTTTTACGTGTTCAATGTTTTGTTAACCTTGTTGAG
AACACTTTCTCGGGCATACACCACGTCTGTTTCTTACATAACGAAAATGT
TGTATGGACAACCCTTCAACTGGACGACATGAAGATCCTATACAAATATC
TCAAATCTCGATTATTCCCTGCTTCAAATGAAATGGAGCAAGGCTTGACG
CGTAGTTCACCTGTATCGACAGCAAGAACATCGCCATCCACCAACTACAA
CCCGAACTTTCTCAACCCGGGAAAATTCTTAACGGCTCCCAGAGATTTGG
TTTCATCGAGTCCTTACACCAGACTTGCTCCTCGTATTTTCGTACAACTG
AACGGAAAAGTGACAGAACTCTATCTGGTGATCTACAAAGCGCATAATTC
AGTCATGTGTTTCCTTATGGATAGCCAATCAGCAAACGCAGATTATTGTA
CTCGCATCCATAATTTCGTTGGGCCGCAACTAGGGAATTTATCGAACATC
ATATCTGAACAACATTCGAAACGTATTTTACAAACGAACAACCAATATCG
TTTTGTTTATTTCAACTCCATGAATCTAGCCATCCGAACATCCATTCACA
AAACGAAACTATCCAACCAGAATTCGAACGGAGTGTCTCCGGAAATCATG
AAACTTTTGATCGATATTCATAAAGATATCGAGTTATCCAAAAACACCTC
TTGTGAAATTGCTACCAAAATGATGAACGATTGCTGGGTTGTCGGTAAAC
GGTCGGGATTCCGACaattttttgtcgtttttaatCAGAAAAACTGGACT
ATTGTAGAAATTTGCGAGGAATTACAACGATTGATGAATACGGGCTTTGG
GAATATTCTCTTTTTGgagtaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022301-exon-sc0000411-1491911889:227223..227351 | TCONS_00022301-exon-sc0000411-1491911889:227223..227351 | Clytia hemisphaerica | exon |
| TCONS_00022301-exon-sc0000411-1510915933:227223..227351 | TCONS_00022301-exon-sc0000411-1510915933:227223..227351 | Clytia hemisphaerica | exon |
| TCONS_00022301-exon-sc0000411-1575043694:227223..227351 | TCONS_00022301-exon-sc0000411-1575043694:227223..227351 | Clytia hemisphaerica | exon |
| TCONS_00022301-exon-sc0000411-1491911889:232304..234517 | TCONS_00022301-exon-sc0000411-1491911889:232304..234517 | Clytia hemisphaerica | exon |
| TCONS_00022301-exon-sc0000411-1510915933:232304..234517 | TCONS_00022301-exon-sc0000411-1510915933:232304..234517 | Clytia hemisphaerica | exon |
| TCONS_00022301-exon-sc0000411-1575043694:232304..234517 | TCONS_00022301-exon-sc0000411-1575043694:232304..234517 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000411 | supercontig | sc0000411:227223..234517 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR013176 | DUF1712_fun |
Blast
BLAST of TCONS_00022301 vs. Swiss-Prot (Human)
Match: CCZ1 (Vacuolar fusion protein CCZ1 homolog OS=Homo sapiens GN=CCZ1 PE=1 SV=1) HSP 1 Score: 361.688 bits (927), Expect = 2.008e-115 Identity = 187/467 (40.04%), Postives = 291/467 (62.31%), Query Frame = 3
Query: 168 ELPAGLVNFFIYNIEYGQREGTEEEKVMFYTPTEVPLGKQINAVGLCQAIAQFVNGFDPSHPCECLITLKTKQYFMNPESSFWMVMTLAIPCSEKVSRE-KKVLEYHPDNVQDNLGKAILKQTYDMFVLFNGPFEAFVDKHGVEALKEQFKLFYYRYLQTINIRQMDILDVFKGIDYLPLEKVDFLRVQCFVNLVENTFSGIHHVCFLHNENVVWTTLQLDDMKILYKYLKSRLFPASNEMEQGLTRSSPVSTARTSPSTNYNPNFLNPGKFLTAPRDLVSSSPYTRLAPRIFVQLNGKVTELYLVIYKAHNSVMCFLMD-SQSANADYCTRIHNFVGPQLGNLSNIISEQH--SKRILQTNN--QYRFVYFNSMNLAIRTSIHKTKLSNQNSNGVSPEIMKLLIDIHKDIELSKNTSCEIATKMMNDCWVVGKRSGFRQFFVVFNQKNWTIVEICEELQRLMNTGF 1550
+ P L++FFIYN +G REG EE K++FY P EV ++I VGLC+AI QF F PS P + L T K +Q+F PE +FWMVM + P EK S++ K V+EY + + D + ++L+Q Y M+ LFNG F ++ GV+ LKE+ + F++RYLQT++++ D+LD+F GI + PL+K+ +L++Q F+N +E + + + + FL+N+ ++W+ L+ DDM+ILYKYL + LFP E E R SP+ +Y G+FLT P +L R P+IFV + EL+L++YKA ++ +CF++D S D+C R+ + VGPQL L++ I EQ +KR+ + Q++F+YFN MNLA ++++H K + + V P++MK+L DI+ D + EI K M+D WVVGK+S R+ +V+ NQKN ++E+ EE+++L T F
Sbjct: 19 QFPPALLSFFIYNPRFGPREGQEENKILFYHPNEVEKNEKIRNVGLCEAIVQFTRTFSPSKPAKSLHTQKNRQFFNEPEENFWMVMVVRNPIIEKQSKDGKPVIEYQEEELLDKVYSSVLRQCYSMYKLFNGTFLKAMEDGGVKLLKERLEKFFHRYLQTLHLQSCDLLDIFGGISFFPLDKMTYLKIQSFINRMEESLNIVKYTAFLYNDQLIWSGLEQDDMRILYKYLTTSLFPRHIEPELA-GRDSPIRAEMPGNLQHY-------GRFLTGPLNLNDPDAKCRF-PKIFVNTDDTYEELHLIVYKAMSAAVCFMIDASVHPTLDFCRRLDSIVGPQLTVLASDICEQFNINKRMSGSEKEPQFKFIYFNHMNLAEKSTVHMRKTPSVSLTSVHPDLMKILGDINSDF-TRVDEDEEIIVKAMSDYWVVGKKSDRRELYVILNQKNANLIEVNEEVKKLCATQF 475
The following BLAST results are available for this feature:
|
