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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022653 ID=TCONS_00022653|Name=TCONS_00022653|organism=Clytia hemisphaerica|type=transcript|length=999bp
TACTGCACACTTATGTCTCTATTCTATTTCCTCTGTTGCTCATATCCTTT
GGTACCTAGATCAGTGTATTTCgaccactttcaaaaacttcTCATCTTGC
CTCCTTAGTCtgccttttttgtgtttttattcctAGGGCCTTATACTTTA
ATTGCATCTGAGACGTGGGAATTaaccatgtacttttgcaaaatgcattg
gaAATTCTgcttatttttgcctttttaaattcaattgtcTTGGAAAttta
tacattttcttctctcgccttggaaattttgaattttgatgaaaactttt
gccctcggaaatcctgtgtagtccgcccccctgttacagacaaattctgg
aatggcccaatatggGACAATTTAGGACCTAATTCAACCAAAAGTACTAA
CTTACTCAATGCTATTATATTAGATGATTTCATATAAAAGTTGCCCTGAA
AAGATCTGCAAACTTTGTAACATGTCATTtccatttgaaatataaatttt
ctgtCTCAACACATTTCGCTTATATAATCATTTTGCTACTTAGGACTTTG
TTTATTTCTACAGTAAAATCCAAAAACTTCCATAAAAGAATTAGCTTAAT
ACTAGAGGTTCAAGTAAATTTAGGTTCTATGATTTCTGTGAACATAAGCA
GAATGGCATAAATTACAAGAGCGAAACAAGAAAACGCAAAGAACAAAACT
CTTACCCTCTTCCACCACCACCTCTTCTATCATCTCTGTCATATCTTTTA
CCAAATGATGATGGTAAAGAGTCATACATTTTTACAGTGTTTTTGACTTT
AAACGGTTGTGAGTGAACAAAGTAACGTTTATAATGAAGACTCTGAAGAG
TTATAGTAAAAGTTGACTTGTCAGTCTTCACCAGTTTGACCTGCCGTGTG
TGTGAAAGAAAAATGCTGTTTCTCGCTAAAAATGAAAGGTCTGGAAAAGG
ATTCTGGGTAATTTATTCAAGAGCCAATCAAAATTCACAGATACGTCAT Run BLAST on NCBI transcript from alignment at sc0000429:259106..260104 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022653 ID=TCONS_00022653|Name=TCONS_00022653|organism=Clytia hemisphaerica|type=transcript|length=999bp|location=Sequence derived from alignment at sc0000429:259106..260104 (Clytia hemisphaerica)
ATGACGTATCTGTGAATTTTGATTGGCTCTTGAATAAATTACCCAGAATC
CTTTTCCAGACCTTTCATTTTTAGCGAGAAACAGCATTTTTCTTTCACAC
ACACGGCAGGTCAAACTGGTGAAGACTGACAAGTCAACTTTTACTATAAC
TCTTCAGAGTCTTCATTATAAACGTTACTTTGTTCACTCACAACCGTTTA
AAGTCAAAAACACTGTAAAAATGTATGACTCTTTACCATCATCATTTGGT
AAAAGATATGACAGAGATGATAGAAGAGGTGGTGGTGGAAGAGGGTAAGA
GTTTTGTTCTTTGCGTTTTCTTGTTTCGCTCTTGTAATTTATGCCATTCT
GCTTATGTTCACAGAAATCATAGAACCTAAATTTACTTGAACCTCTAGTA
TTAAGCTAATTCTTTTATGGAAGTTTTTGGATTTTACTGTAGAAATAAAC
AAAGTCCTAAGTAGCAAAATGATTATATAAGCGAAATGTGTTGAGacaga
aaatttatatttcaaatggaAATGACATGTTACAAAGTTTGCAGATCTTT
TCAGGGCAACTTTTATATGAAATCATCTAATATAATAGCATTGAGTAAGT
TAGTACTTTTGGTTGAATTAGGTCCTAAATTGTCccatattgggccattc
cagaatttgtctgtaacaggggggcggactacacaggatttccgagggca
aaagttttcatcaaaattcaaaatttccaaggcgagagaagaaaatgtat
aaaTTTCCAAgacaattgaatttaaaaaggcaaaaataagcAGAATTtcc
aatgcattttgcaaaagtacatggttAATTCCCACGTCTCAGATGCAATT
AAAGTATAAGGCCCTaggaataaaaacacaaaaaaggcaGACTAAGGAGG
CAAGATGAgaagtttttgaaagtggtcGAAATACACTGATCTAGGTACCA
AAGGATATGAGCAACAGAGGAAATAGAATAGAGACATAAGTGTGCAGTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022653-exon-sc0000429-1491911889:259106..260104 | TCONS_00022653-exon-sc0000429-1491911889:259106..260104 | Clytia hemisphaerica | exon |
| TCONS_00022653-exon-sc0000429-1510915933:259106..260104 | TCONS_00022653-exon-sc0000429-1510915933:259106..260104 | Clytia hemisphaerica | exon |
| TCONS_00022653-exon-sc0000429-1575043694:259106..260104 | TCONS_00022653-exon-sc0000429-1575043694:259106..260104 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000429 | supercontig | sc0000429:259106..260104 . |
Blast
The following BLAST results are available for this feature:
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