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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022701 ID=TCONS_00022701|Name=TCONS_00022701|organism=Clytia hemisphaerica|type=transcript|length=853bp
tttggaatttcagggtcagtcgggcccgtaaaacaactaatcaaattggt
ctcaccTAAAACAAAAACTTAATAGTTTCTTAGGGTTAAATAGTCAGTTC
GACTTTGCTGATTGATGATTTCCATCTCGTTTCTTTCATATGCTGGTAAC
AAGGCCTCCCAAAAGCAACAGACTAACCGGCTTCAAGCAGAAGAAGAATA
CCAAAACAAAAACAGGTGACGCAATCAGATCCATGTACCAAAGTACTTGT
AAGCTTTTTGGGATTGGGGGCTGATCGGGGATATCAAAAACATAGAGAAA
TGATCGGAACATGTTATTGATCAGTGTAAAAGTGATTCCCAAGAGACCAA
TAACTTCCATCCAATGCAAGATTGTGAATTGCTCTTTGTACGGCTTTACG
AACCAgtaaatgtaaataaaaagcaGGATGATGGGTGCTGCATAGCAGAT
TCGGTTGACAGGGTTGATTGCAAAAGTAGTGACAAAAGCCAAAATCAAAC
GTTGGTATAATCTCCAAGTCTCCCAGAAGACATAGTATTCTTTGTCATTT
CTTTTTCTGTAAGCTTCTTCAAACATTTCTTTCAACAGCTTTGTCACTCT
TTTCTCATCATTCTCATCAGTAGCCAGACATATCGTACTCCTCTTTGCAA
ACATGAAGTATATAGCCAAATACGGGAAAATCAAAATTGCCACAAATTTC
TTCAAAGAGATGACGTACCTCATATACATTCGGTATGATACCATGAGTGC
AGCTGGGAAAGGGATTGCCCATAAGACCAAGAATACAATCTCCAAGTTTT
GCCACCATTGAAAGCATGGTTGATCTCCATTGATGAAGAGAACCAGTTTA
CCT Run BLAST on NCBI transcript from alignment at sc0000431:163000..164315+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022701 ID=TCONS_00022701|Name=TCONS_00022701|organism=Clytia hemisphaerica|type=transcript|length=1316bp|location=Sequence derived from alignment at sc0000431:163000..164315+ (Clytia hemisphaerica)
tttggaatttcagggtcagtcgggcccgtaaaacaactaatcaaattggt
ctcaccTAAAACAAAAACTTAATAGTTTCTTAGGGTTAAATAGTCAGTTC
GACTTTGCTGATTGATGATTTCCATCTCGTTTCTTTCATATGCTGGTAAC
AAGGCCTCCCAAAAGCAACAGACTAACCGGCTTCAAGCAGAAGAAGAATA
CCAAAACAAAAACAGGTGACGCAATCAGATCCATGTACCAAAGTACTTGT
AAGCTTTTTGGGATTGGGGGCTGATCGGGGATATCAAAAACATAGAGAAA
TGATCGGAACATGTTATTGATCAGTGTAAAAGTGATTCCCAAGAGACCAA
TAACTTCCATCCAATGCAAGATTGTGAATTGCTCTTTGTACGGCTTTACG
AACCAgtaaatgtaaataaaaagcaGGATGATGGGTGCTGCATAGCAGAT
TCGGTTGACAGGGTTGATTGCAAAAGTAGTGACAAAAGCCAAAATCAAAC
GTTGGTATAATCTATGATGGAGTAAAAGTTATTATTGCTGCGGGGAATCT
TTTCTTAATCTAAGCTAATTGAATTGTTTTATCGTTACACACAGTAGTTG
GAGTTAGACGTCTTTATCCCTTTAGTGGATGTACGTCAAACTAATACATC
CCATCGGTTGCTGTTTTACGATGCTTTCACCTTTTATGAAACTAGACATA
ataattttattgaaactttGTCACTGCAGTTTGACTTGAAAGTTCCAAAA
GAAGACTCAAAATTATTGAAAGCTTATTCCCAAGTTAAAGTTAAACTTGG
CAAATATTTAGGAAATTGGAAAGTAAAAGTTGATAGTTAGTAAACACTTT
TAACTGAAAGTTTCACAGAGGATGAAATACGCTTTCCCTGTGTGCTTTTT
TCTATgatcttaaaaatatttttttgtcaatgtttATAGAACTTACCAAC
ATGAAAAGGAATATTGTAACCTACCTCCAAGTCTCCCAGAAGACATAGTA
TTCTTTGTCATTTCTTTTTCTGTAAGCTTCTTCAAACATTTCTTTCAACA
GCTTTGTCACTCTTTTCTCATCATTCTCATCAGTAGCCAGACATATCGTA
CTCCTCTTTGCAAACATGAAGTATATAGCCAAATACGGGAAAATCAAAAT
TGCCACAAATTTCTTCAAAGAGATGACGTACCTCATATACATTCGGTATG
ATACCATGAGTGCAGCTGGGAAAGGGATTGCCCATAAGACCAAGAATACA
ATCTCCAAGTTTTGCCACCATTGAAAGCATGGTTGATCTCCATTGATGAA
GAGAACCAGTTTACCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022701-exon-sc0000431-1491911889:163000..163510 | TCONS_00022701-exon-sc0000431-1491911889:163000..163510 | Clytia hemisphaerica | exon |
| TCONS_00022701-exon-sc0000431-1510915933:163000..163510 | TCONS_00022701-exon-sc0000431-1510915933:163000..163510 | Clytia hemisphaerica | exon |
| TCONS_00022701-exon-sc0000431-1575043694:163000..163510 | TCONS_00022701-exon-sc0000431-1575043694:163000..163510 | Clytia hemisphaerica | exon |
| TCONS_00022701-exon-sc0000431-1491911889:163974..164315 | TCONS_00022701-exon-sc0000431-1491911889:163974..164315 | Clytia hemisphaerica | exon |
| TCONS_00022701-exon-sc0000431-1510915933:163974..164315 | TCONS_00022701-exon-sc0000431-1510915933:163974..164315 | Clytia hemisphaerica | exon |
| TCONS_00022701-exon-sc0000431-1575043694:163974..164315 | TCONS_00022701-exon-sc0000431-1575043694:163974..164315 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000431 | supercontig | sc0000431:163000..164315 + |
Blast
The following BLAST results are available for this feature:
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