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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022769 ID=TCONS_00022769|Name=TCONS_00022769|organism=Clytia hemisphaerica|type=transcript|length=459bp
TATTTTGAGTACATtcgttcatttttctttttagatattcaagtaaATAA
ACACAGAACTCTAAATTGAAGATTTGAATACATCAAATTCACTAACTATC
GAAGCTTTCAACAAATCGTCATGAAAAACATTAGTTTCGCCTGAAGAAAT
TGTTTGGTGCAAGTGGTATCATTTTGAGATATGTGAAACCTGATTTCATA
AAAGAGCGAAACGTCTCTTCCCCTATTTGTACTTCAATGTTCAATGGACA
GCATACCAACCGaaacaaacaaaatctttttgtcAACGATGCTGCTGTGG
AATCTGAATGGAATTCTGGCAGGACGAGAAGCCAAAAGCTTTTATTCATA
TAGCAAGTCAACAATGATTTTTCGCATGCTTTGAAGTAAACTTTTTGGGC
AGTGAGATCAAACCAACCAAcaataaattgaataaaaagaagCAATAAAA
GCCAGTTTA Run BLAST on NCBI transcript from alignment at sc0000432:175288..178390+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022769 ID=TCONS_00022769|Name=TCONS_00022769|organism=Clytia hemisphaerica|type=transcript|length=3103bp|location=Sequence derived from alignment at sc0000432:175288..178390+ (Clytia hemisphaerica)
TATTTTGAGTACATtcgttcatttttctttttagatattcaagtaaATAA
ACACAGAACTCTAAATTGAAGATTTGAATACATCAAATTCACTAACTATC
GAAGCTTTCAACAAATCGTCATGAAAAACATTAGTTTCGCCTGAAGAAAT
TGTTTGGTGCAAGTGGTATCATTTTGAGATATGTGAAACCTGATTTCATA
AAAGAGCGAAACGTCTCTTCCCCTATTTGTACTTCAATGTTCAATGGACA
GCATACCAACCGaaacaaacaaaatctttttgtcAACGATGCTGCTGTGG
AATCTGAATGGAATTCTGGCAGGACGAGAAGCCAAAAGCTTTTATTCATA
TAGCAAGTCAACAATGATTTTTCGCATGCTTTGAAGTAAACTTTTTGGGC
AGTGGTAAGTATTTTTGTTGTTGTCGGTAAGCATTCTTCTCATCTAGTTT
TAAAGGGTCTGAGATTatcaaattctttgaaaaagtcTTTTAGCagtttc
ctttttcaaaaacagGGGGTTACCACTTAAGTAAGTTGGTAACTATTACa
gtttatttcatgttgacgaaaaggtagcaacataggctaataaaagtcaa
cgctactttacaattaaaaaagactaatgttttgttggcagctcatcgtc
gctgctactgaggctagatattgacagcttttggttggcaaagtttttgt
ttgtttttatcaagtgaaagttatctgttctgggacttcctctcacacgc
caaatgaaatcaccatcacattcggagttccattttttagcattttcgca
catctctttgatttttcttctttcattgatgGTGAAATCATCAGTGATGC
TTAGATGATATCCAAACTTTTTTAGGGCTTTAAGGTTGCTcatgattctt
tctttttcttcttcactttgcaAGGTCACCTTTATCGGAcgatttttctt
cgatttttcatGTTCGANTTTCTTTGAGTTTCcaccatttttttgaaagc
gATGCAGAACACATCTTgactatttgacgtcaaataaaaaacggtcCTTA
ATGGGACCTTCCTATTTAAAtggttttaaaaatcaaaaataatttgggTT
AAATGTATTAGAAgtgacaaaaaaatcaagatgaaaccaaaaagtcgaaa
atgatgacaAGCAGGCCTTTATCCCATCTTTATGGGACACCATCAGCTAA
AGAAGCAAAGCAAAGCTgttttttaacaacttttccTAGACACCAAAAAG
CAGTCTTCAAAACTATTATAACTGTCATTCATAGNttcctcttctttttg
ttccgCAACAACatatttaagattttccttGTGTGCTTTGGTTATATCAG
CGTAGGTTTTACGGGATGACtctttcataaaatcttttgtctgttGTATC
TCTTCTNAACAATTTTTCCCCGGGTATCCTAGACACCAAAAAGCAGTCTT
CAAAACTATTATAACTGTCATTCAAAGACAGTCACCAAAtcttttggtaa
aaatattttttttcaaaaggaataTGTCTAGACATTTCTTATTCACAGTT
AACTATACTTCCCCAGTGGTGTTTGAAAACGGATCATCCAAGAGGAATCT
GGAGGAAATATAGGTAGTTTTATTTCTGCACAGGCTTGAGTAATTATTCT
CTTTTGCTGTTTATTTTGGCCATGTCTTTAGCAAGGCAGTCTGTTGCAAG
ACCTACGATTTCAGCTAAAGCCTAcgaccttatcggccctttttacaccg
gcccttattggcgttactTTTAGGCtcgttttttatcattatttgtcaat
ataaaggattttaggtatgattcgaagacgaaaattatccatACTTAAAA
ttactccatatttaaaacttcagtgaaatatttaataaaataaaaaatta
gtgatttcgatggaattttcaacagtttactattgaaaaatgacatttta
atgtaaattttagtcattatttactaatttgaagcataagtagccatttt
tacaaattttggcgttattaacggccctaattggcgtaagcccaaagtTA
GGctttggcgtaataagggccggcgttgaataagggccggcgtaaaaagg
gccgataagatAGAAGATCGAGAAGAAATATTCAGGAGTAGCCGATAAAC
AGATGTTTATTTTGATGGTCCTAAcataaaggaaaatgaaataaaatgct
AAGAACGAAAATTGAAACAAAGAACTAAAAGCCAGTCCTAGCAAAAAGAT
TTAAATCCCCTTTAGAGGCTTAGAATTATAAATGCCGTTAAAACGTTCAA
TTTCCGACATTCTTTTACTTTACTTCTTTTGGCATAAAACCATTAGACTt
atccatagatttataaagcccgaacgACTATATATCGTGCTTTTGctaaa
aagtgtgccgaggttaggtaggaaatcctacctaagtcacgcgatattac
aatataatttcagcgcttgaacaatcagaagcttcgcttgttttcgaaaa
caatagcagcaatattctttgcgatattcactttttttttgcttggaaga
gcttaaagcacttcatctagcccttcgggctttataaatctatggactTG
TCTACTGACCTTTAAAAAAAGCCTGGGCTAAGCTATGCATCCGCCATCTA
CGATCGGAGGTTTTTTTGAAAGGGATACCCACCAAAGCAGTGCTTACAAT
ACAATCTTGACTGACGTCAAATGGCGTGACATCAAGTTAAGAAAAAGTAG
ATCCAGCTACACTCGCACTGATTAGTGTTGTCATTAGGGTCagcaataga
tcttatcggagtttttgattttttttaaaaagcgatgcattgtgggattg
tttcgggggtattacaacagaaatctcttaggaattcctcgaaggaattc
tattgtaatacctcCGAAACAATctcacaatgcatcgctgttttagaaaa
atcaaaaactccgataaagtCTAATCACGCAgtaatctttcgcaaatttt
tttgtcattgaaTCCCTCCTGATTCTTCTCTCCTTCTTTCATTTTCAGAG
ATCAAACCAACCAAcaataaattgaataaaaagaagCAATAAAAGCCAGT
TTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022769-exon-sc0000432-1491911889:175288..175691 | TCONS_00022769-exon-sc0000432-1491911889:175288..175691 | Clytia hemisphaerica | exon |
| TCONS_00022769-exon-sc0000432-1510915933:175288..175691 | TCONS_00022769-exon-sc0000432-1510915933:175288..175691 | Clytia hemisphaerica | exon |
| TCONS_00022769-exon-sc0000432-1575043694:175288..175691 | TCONS_00022769-exon-sc0000432-1575043694:175288..175691 | Clytia hemisphaerica | exon |
| TCONS_00022769-exon-sc0000432-1491911889:178336..178390 | TCONS_00022769-exon-sc0000432-1491911889:178336..178390 | Clytia hemisphaerica | exon |
| TCONS_00022769-exon-sc0000432-1510915933:178336..178390 | TCONS_00022769-exon-sc0000432-1510915933:178336..178390 | Clytia hemisphaerica | exon |
| TCONS_00022769-exon-sc0000432-1575043694:178336..178390 | TCONS_00022769-exon-sc0000432-1575043694:178336..178390 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000432 | supercontig | sc0000432:175288..178390 + |
Blast
The following BLAST results are available for this feature:
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