TCONS_00022780 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022780
Unique NameTCONS_00022780
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3043

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022780 ID=TCONS_00022780|Name=TCONS_00022780|organism=Clytia hemisphaerica|type=transcript|length=3043bp
TGAAAACCAATATTCGAATGCAGTCGAACCTCGATTAATTAAATCAGTTA
AATTCTTGGGAAGATTTGACAAAGTTGATTCAGATTTTACCATTCGATCT
TATCAATCTCGATATCAAATTAATAAACTACTAGCCCTTGATGTTCGTCA
ATTAATTCGGTCTGATTCGATCTAATTCGGTtcgattgttcttataaaaa
aagtgttcaAAACACAGATGTTTTTCTCGATGAAATCAAGAGGAGTCGGT
AGGTAAGAGATGCAGCAATGACATTGTCACGGCACCGGAAATTCAAAATA
AAGGATGATCGAcgaataaaaaaatcaatcaagCAATCCTTGCCACAATG
TTACAAAACGTAATTAATTCTCTTTAATCGTTTTTCTATTCTTTCGAACA
TTTGTAATGAAAAGAACAATGGATTCTTTTTAATTAGCTCTATTATTCTT
TGTAATAATGGGTTACGTAATGCACACAAAAAATGCTCCCCAACTCTCCT
ATAACTTGACAGTTGATACCGAACCCTTGGTATATATGAcacgaaaaaat
caaaatacaaaaaaaattaagaaagatTTATAGTTTTTGAGCGAGATGTT
CAAGTTGGTTGTATTAGCTGTTTTGTTGGCTTCTCAATGTTTGCTGGTGG
AAGCAAGCTGTGGATGTCAAAATAACGGCCAATGTGGTGCAGATTTCACG
TGTACTTGTCCTGATGGCTTCTATGGCCCCATTTGCAACCAAtACGCAGA
GACATACACCATCCGCTACGAATCAACACCCAGTGGTATCCGAACATCTG
ACATCACCAATGGCTTCAAATTGAAACTCTTAAGCCAAAAGATCACAAAA
TCTTTCTCAGTCGGTCTCGGCAATTTATACGCTGTCACATTCTATCAAGC
ACTTACTGAAGCCGAGCGTCGTAAATTACAATCTGTAGCGTCAGATGTTG
CGGCGGGAACTACGGTAGCCGAGAtcagtgatttcaatgaatgcgTCGAC
GGAAAACAATCGTGCTACAATGGATTAAAATGTATCAATACACAATACTC
CTTCAGATGTGGATGCCCAGAAGGTTATGAAGTCAAAGAAAACAGATGTA
TACAAGAGGTTGATAGTAATGCCAAGACAGTCATTTACGTTTGGGCTGGT
GCAGTTGGTGCCGTCATCTTATTCACCCTTGGTTGTCTCATGTTCTACAG
ACacagaaaaatcgaaaaaggAAAGAAAAGCGCTTTTGAATACCAAAAGA
AGATGGCTAACCGAGGACAATTGACGCCAACAAACTTGAGTGAATACGAA
GGACAGCACGGTCGCAGAGGCTCCCCTTCCGCATCTGTAGTTGACGGTCA
CACCCGATACTCGATGGGTGATATCGGTTCAGATGTTTACTCTTACAATG
CGAATTACAATCAAGATCCAAGTGCTTATTATGGTACACAAACTAGATTA
TCAATCCCTATGGACAATTCTCAAGTCAATCCCGGTTATGAACCAACACC
GGAACACCTTAGATTCCCATCGACCGGTAGTTATACAAACAACGGAAACA
TGGGAACTTACGGACAACCGGAAACAGATAACGTATACAACCCGCATGCG
CAAATGGGAAACTCGCCAAATACACAAGATAACACTAATACATTTACTAA
TACAACGACCAACCCAACCGCCACAGATGAAGTTCCTCTGCATTAAGCAT
CAAATTAATGATTAAGCGGCGAGGGCCAACCcgttgagtttaaagccccg
atgGGGTTAGATATGAAACTCTTTGATGAGAAATGAAGCCGCTTATTTCC
CATCCTAAAAGCATGACCCGGGTGGTTCTCACACTAACGACAGGCTTACA
TGTCACGTGAAAACGAAAAAAGTGCTAGATTCAAGCTGATTTTCTAAATC
CAGCGGCAATCTTAggacttcactttttcttgattGAAAAAGATCTaagg
gctttaaactcaatcgGTTAATCGAAACAAGGTAACGGCCCTGGAAAAGT
CAGTGTCGGTTATAAAAAGTTGGAGTTTTATatgaaaaatctatttttaa
gaATTAGTTATAATGTTGATATTGAAATTTCATTACGTAAGTAACTGCTA
CACTTTAAACCTAGTAAAATCGCAGGTCTGATATCAGTGAGTGGGCTCTC
ACCAACCATACCTAAATTTACATATTTGGGTATTTCTTAACAATAACACT
AAATGATTTTGATCCATTACAAATGTAAATTTTCTATAATTGCCCCCTTT
TAATGGATTCTATTTATtgagtaaaaaaattaaatagttTCAGTTGCTGG
CATAAGGAAATAACAAATTAGTGATGGTATATAATTAACGAGGTCTATTT
AATACATGTTACGTAATGATGaccaattaaaaattttaattgacgNTAAG
GAAATAACAAATTAGTGATGGTATATAATTAATGAGGTCTACTTAATACG
TGTTACGTAATGATGgccaattaaaaattttaattgacaaaatctattat
ttatttatttgttttctgTTCaagttttttacaattttagaaTATCTTCA
GATATATTATATTATGGTTTCAAACGATCTTTAGCCTACAATTTTGCAAT
CATTTATCTNCTTCAGATATATTATATTATGGTTTCAAACGATCTTTAGC
CTACAATTTTGTGATCATTTAtctgtaaatatattttttttagtttttag
caataatttttatttttcaaatttttgacctcatttttttaatgaggtta
tgtattgttttaaaatgagaatatctctagataaaaaataaatagaaaaa
acgATTTATGgaacaatttttaaaagaacaattagggttaaaacgccaaa
aattagaacaatttaagaattgTCAGAACAATCGGAAATGGCTGATTCga
ttatataatatataatgcATCTATTTCGACTTTAACATAAGAACAGGATT
AGAATAACTTGAGACTCAGTATgtcaaaataataagaacaagCGAGGTTC
AACAAGGGTTAACTGGTTGTTATAAGAAGAAGATTCGAATACG
Run BLAST on NCBI

protein sequence of TCONS_00022780-protein

>TCONS_00022780-protein ID=TCONS_00022780-protein|Name=TCONS_00022780-protein|organism=Clytia hemisphaerica|type=polypeptide|length=366bp
MFKLVVLAVLLASQCLLVEASCGCQNNGQCGADFTCTCPDGFYGPICNQY
AETYTIRYESTPSGIRTSDITNGFKLKLLSQKITKSFSVGLGNLYAVTFY
QALTEAERRKLQSVASDVAAGTTVAEISDFNECVDGKQSCYNGLKCINTQ
YSFRCGCPEGYEVKENRCIQEVDSNAKTVIYVWAGAVGAVILFTLGCLMF
YRHRKIEKGKKSAFEYQKKMANRGQLTPTNLSEYEGQHGRRGSPSASVVD
GHTRYSMGDIGSDVYSYNANYNQDPSAYYGTQTRLSIPMDNSQVNPGYEP
TPEHLRFPSTGSYTNNGNMGTYGQPETDNVYNPHAQMGNSPNTQDNTNTF
TNTTTNPTATDEVPLH
Run BLAST on NCBI

transcript from alignment at sc0000432:206494..211318-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022780 ID=TCONS_00022780|Name=TCONS_00022780|organism=Clytia hemisphaerica|type=transcript|length=4825bp|location=Sequence derived from alignment at sc0000432:206494..211318- (Clytia hemisphaerica)
TGAAAACCAATATTCGAATGCAGTCGAACCTCGATTAATTAAATCAGTTA
AATTCTTGGGAAGATTTGACAAAGTTGATTCAGATTTTACCATTCGATCT
TATCAATCTCGATATCAAATTAATAAACTACTAGCCCTTGATGTTCGTCA
ATTAATTCGGTCTGATTCGATCTAATTCGGTTCGATTGTTCTTATAAAAA
AAGTGTTCAAAACACAGATGTTTTTCTCGATGAAATCAAGAGGAGTCGGT
AGGTAAGAGATGCAGCAATGACATTGTCACGGCACCGGAAATTCAAAATA
AAGGATGATCGACGAATAAAAAAATCAATCAAGCAATCCTTGCCACAATG
TTACAAAACGTAATTAATTCTCTTTAATCGTTTTTCTATTCTTTCGAACA
TTTGTAATGAAAAGAACAATGGATTCTTTTTAATTAGCTCTATTATTCTT
TGTAATAATGGGTTACGTAATGCACACAAAAAATGCTCCCCAACTCTCCT
ATAACTTGACAGTTGATACCGAACCCTTGGTATATATGACACGAAAAAAT
CAAAATACAAAAAAAATTAAGAAAGATTTATAGTTTTTGAGCGAGATGTT
CAAGTTGGTTGTATTAGCTGGTAAGGTTTTGTTTAAAATTTGAAAACACT
TTCTTTACCTTGGTCATGTAAATATTTTTATGTTTACACAACGCGCCTAA
ACTACATTGACCATAGGAAAATTGATTCCAAAATTTTTCATTTCTACAGC
ACAGGGTTCATCCTGCACATTATTTTTTGAGTCTTATTGCTTATTTTTCT
ATACCATTTTCTTGATAAAAGTACTGGTCGACGAGCAGTGAAAATATACC
ACTTAATAATATCTGTTGCCGCTATTTGTAGCTATTGAAAGTTCTAAATA
ACTATACAGAATCTTTTTTGAGTATTTGATATACAAGTAAGTATAAGTAA
TATTTCAACCAATCAATTGTTCTTCAATTCAACAGTTTTGTTGGCTTCTC
AATGTTTGCTGGTGGAAGCAAGCTGTGGATGTCAAAATAACGGCCAATGT
GGTGCAGATTTCACGTGTACTTGTCCTGATGGCTTCTATGGCCCCATTTG
CAACCAATGTAAGTATTTATTTTTGAATATTTTATCGTTCACTTGATGAA
GAATCTGAAATATGAGAAAAGACTTCACGATGATAAATCAAGACGTTGAC
TTAATAAGTTGGAGCTTGAAAAGTCGAGTTACTGAGGCTTATTAATAAGG
TTTTTGTTTCCTGAAGAGGCCAGCGAAATTCGAGTTAAGGAAGGTTCGAG
TTATGGAAACTCTACTGCTTATTTATGATCAAATATGTTCTTCACATTTT
AGACGCAGAGACATACACCATCCGCTACGAATCAACACCCAGTGGTATCC
GAACATCTGACATCACCAATGGCTTCAAATTGAAACTCTTAAGCCAAAAG
ATCACAAAATCTTTCTCAGTCGGTCTCGGCAATTTATACGCTGTCACATT
CTATCAAGCACTTACTGAAGCCGAGCGTCGTAAATTACAATCTGTAGCGT
CAGATGTTGCGGCGGGAACTACGGTAGCCGAGATCAGTGATTTCAATGAA
TGCGTCGACGGAAAACAATCGTGCTACAATGGATTAAAATGTATCAATAC
ACAATACTCCTTCAGATGTGGATGCCCAGAAGGTTATGAAGTCAAAGAAA
ACAGATGTATACAAGGTAAGGGGTCTCAATCGGTCAGGGTTTTAGATAGT
CCCGTTTCGTGCTCATTATGAAGTGTTCAATAATTTACTCATCCAACTTT
GAGTTGGCTTTCGAATGAGAAAGAGTGGGATACTTAATTAAAACGTTTCT
GGTTTTTCTTCGCGTTTCTCGTATTGACGGATGTGACGGTTCGATAGATT
AATGGTCGTTAGTTACAGAGTCGTCAATTTGATAACATCTGTCCTTCTCT
CTGTCAGACTGTTTCCTTTGATCTTAGTTTCACATAGAATCGAGAAAATA
TTCCAAACCCTATGAGATGGGAGTGTTTTGGGGTGAAATTTAGAGGCAGT
CGAATCGATTTTCTTTGAAATTGAGATTCTCTCGAAAATAATCAAAGTGA
GACTGTTCTCAAATAAAGATAATGAAAAGTTATTAATCCATGATATACAC
GCTTTACTTTTTACTGTTAAAATTAAGGTATCCACCTTTGCACTCAACAC
TTGAACTTGGATCTAAAACCTGCCATTGAAGAAATTCATATTATTTTCAA
CTTATTCTTTTTCCTTCTCTACAGAGGTTGATAGTAATGCCAAGACAGTC
ATTTACGTTTGGGCTGGTGCAGTTGGTGCCGTCATCTTATTCACCCTTGG
TTGTCTCATGTTCTACAGACACAGAAAAATCGAAAAAGGGTAAGAAAATT
TGTAACTTATCAAATTCTTTGAAATTGATCTTTAAACAGTATTTTTGCCA
AGCAGGATAGTTTAAAGAATTATCAAATTCAGTTAGATATCATACTGAAA
AACATACCTTTCCGCAATTTCAAAGAAAATGTGTTTTTCGATGAAACAAA
ATGATCAGAAAAACCACGAGTTGTTTACACGGGGGTATTTTTAATAACGA
GTTTCCGTTTGAGTCATCTCACGTCCTAATTATATAACCCTCTCATTACC
TTAGTAATTAATATGAAGCTTTAAATAATGACATGATTAGCTTTTTTAAT
TGTTCCTGAAACTCATTATGTTTTGCGACAAATTACTGTGTCTCTTTCCG
GATGAGATTAAAATTCGAAAGTTGATATTAGCTATTATTCTTCCTTCTAA
ATTTTTCTTGAAAAATATTGGTTTTTCAAAAATTTCTCTTATATTCCATA
AAACAATACACGTGAAAAGATTCAAATCAAGCAAACCACGTCGGTAATAA
AATCCTCTAGTCCAAAATTGCACAACTTATACCTGACAGCTTTCGATAGG
GCCTCCAAACAATAAAATGTTACTAAATGATATCATTCGTATTTCCCTTA
CAGAAAGAAAAGCGCTTTTGAATACCAAAAGAAGATGGCTAACCGAGGAC
AATTGACGCCAACAAACTTGAGTGAATACGAAGGACAGCACGGTCGCAGA
GGCTCCCCTTCCGCATCTGTAGTTGACGGTCACACCCGATACTCGATGGG
TGATATCGGTTCAGATGTTTACTCTTACAATGCGAATTACAATCAAGATC
CAAGTGCTTATTATGGTACACAAACTAGATTATCAATCCCTATGGACAAT
TCTCAAGTCAATCCCGGTTATGAACCAACACCGGAACACCTTAGATTCCC
ATCGACCGGTAGTTATACAAACAACGGAAACATGGGAACTTACGGACAAC
CGGAAACAGATAACGTATACAACCCGCATGCGCAAATGGGAAACTCGCCA
AATACACAAGATAACACTAATACATTTACTAATACAACGACCAACCCAAC
CGCCACAGATGAAGTTCCTCTGCATTAAGCATCAAATTAATGATTAAGCG
GCGAGGGCCAACCCGTTGAGTTTAAAGCCCCGATGGGGTTAGATATGAAA
CTCTTTGATGAGAAATGAAGCCGCTTATTTCCCATCCTAAAAGCATGACC
CGGGTGGTTCTCACACTAACGACAGGCTTACATGTCACGTGAAAACGAAA
AAAGTGCTAGATTCAAGCTGATTTTCTAAATCCAGCGGCAATCTTAGGAC
TTCACTTTTTCTTGATTGAAAAAGATCTAAGGGCTTTAAACTCAATCGGT
TAATCGAAACAAGGTAACGGCCCTGGAAAAGTCAGTGTCGGTTATAAAAA
GTTGGAGTTTTATATGAAAAATCTATTTTTAAGAATTAGTTATAATGTTG
ATATTGAAATTTCATTACGTAAGTAACTGCTACACTTTAAACCTAGTAAA
ATCGCAGGTCTGATATCAGTGAGTGGGCTCTCACCAACCATACCTAAATT
TACATATTTGGGTATTTCTTAACAATAACACTAAATGATTTTGATCCATT
ACAAATGTAAATTTTCTATAATTGCCCCCTTTTAATGGATTCTATTTATT
GAGTAAAAAAATTAAATAGTTTCAGTTGCTGGCATAAGGAAATAACAAAT
TAGTGATGGTATATAATTAACGAGGTCTATTTAATACATGTTACGTAATG
ATGACCAATTAAAAATTTTAATTGACGNTAAGGAAATAACAAATTAGTGA
TGGTATATAATTAATGAGGTCTACTTAATACGTGTTACGTAATGATGGCC
AATTAAAAATTTTAATTGACAAAATCTATTATTTATTTATTTGTTTTCTG
TTCAAGTTTTTTACAATTTTAGAATATCTTCAGATATATTATATTATGGT
TTCAAACGATCTTTAGCCTACAATTTTGCAATCATTTATCTNCTTCAGAT
ATATTATATTATGGTTTCAAACGATCTTTAGCCTACAATTTTGTGATCAT
TTATCTGTAAATATATTTTTTTTAGTTTTTAGCAATAATTTTTATTTTTC
AAATTTTTGACCTCATTTTTTTAATGAGGTTATGTATTGTTTTAAAATGA
GAATATCTCTAGATAAAAAATAAATAGAAAAAACGATTTATGGAACAATT
TTTAAAAGAACAATTAGGGTTAAAACGCCAAAAATTAGAACAATTTAAGA
ATTGTCAGAACAATCGGAAATGGCTGATTCGATTATATAATATATAATGC
ATCTATTTCGACTTTAACATAAGAACAGGATTAGAATAACTTGAGACTCA
GTATGTCAAAATAATAAGAACAAGCGAGGTTCAACAAGGGTTAACTGGTT
GTTATAAGAAGAAGATTCGAATACG

Coding sequence (CDS) from alignment at sc0000432:206494..211318-

>TCONS_00022780 ID=TCONS_00022780|Name=TCONS_00022780|organism=Clytia hemisphaerica|type=CDS|length=5505bp|location=Sequence derived from alignment at sc0000432:206494..211318- (Clytia hemisphaerica)
AAAGAAAAGCGCTTTTGAATACCAAAAGAAGATGGCTAACCGAGGACAAT
TGACGCCAACAAACTTGAGTGAATACGAAGGACAGCACGGTCGCAGAGGC
TCCCCTTCCGCATCTGTAGTTGACGGTCACACCCGATACTCGATGGGTGA
TATCGGTTCAGATGTTTACTCTTACAATGCGAATTACAATCAAGATCCAA
GTGCTTATTATGGTACACAAACTAGATTATCAATCCCTATGGACAATTCT
CAAGTCAATCCCGGTTATGAACCAACACCGGAACACCTTAGATTCCCATC
GACCGGTAGTTATACAAACAACGGAAACATGGGAACTTACGGACAACCGG
AAACAGATAACGTATACAACCCGCATGCGCAAATGGGAAACTCGCCAAAT
ACACAAGATAACACTAATACATTTACTAATACAACGACCAACCCAACCGC
CACAGATGAAGTTCCTCTGCATTAAAGGTTGATAGTAATGCCAAGACAGT
CATTTACGTTTGGGCTGGTGCAGTTGGTGCCGTCATCTTATTCACCCTTG
GTTGTCTCATGTTCTACAGACACAGAAAAATCGAAAAAGGACGCAGAGAC
ATACACCATCCGCTACGAATCAACACCCAGTGGTATCCGAACATCTGACA
TCACCAATGGCTTCAAATTGAAACTCTTAAGCCAAAAGATCACAAAATCT
TTCTCAGTCGGTCTCGGCAATTTATACGCTGTCACATTCTATCAAGCACT
TACTGAAGCCGAGCGTCGTAAATTACAATCTGTAGCGTCAGATGTTGCGG
CGGGAACTACGGTAGCCGAGATCAGTGATTTCAATGAATGCGTCGACGGA
AAACAATCGTGCTACAATGGATTAAAATGTATCAATACACAATACTCCTT
CAGATGTGGATGCCCAGAAGGTTATGAAGTCAAAGAAAACAGATGTATAC
AAGTTTTGTTGGCTTCTCAATGTTTGCTGGTGGAAGCAAGCTGTGGATGT
CAAAATAACGGCCAATGTGGTGCAGATTTCACGTGTACTTGTCCTGATGG
CTTCTATGGCCCCATTTGCAACCAATATGTTCAAGTTGGTTGTATTAGCT
GAAAGAAAAGCGCTTTTGAATACCAAAAGAAGATGGCTAACCGAGGACAA
TTGACGCCAACAAACTTGAGTGAATACGAAGGACAGCACGGTCGCAGAGG
CTCCCCTTCCGCATCTGTAGTTGACGGTCACACCCGATACTCGATGGGTG
ATATCGGTTCAGATGTTTACTCTTACAATGCGAATTACAATCAAGATCCA
AGTGCTTATTATGGTACACAAACTAGATTATCAATCCCTATGGACAATTC
TCAAGTCAATCCCGGTTATGAACCAACACCGGAACACCTTAGATTCCCAT
CGACCGGTAGTTATACAAACAACGGAAACATGGGAACTTACGGACAACCG
GAAACAGATAACGTATACAACCCGCATGCGCAAATGGGAAACTCGCCAAA
TACACAAGATAACACTAATACATTTACTAATACAACGACCAACCCAACCG
CCACAGATGAAGTTCCTCTGCATTAAAGGTTGATAGTAATGCCAAGACAG
TCATTTACGTTTGGGCTGGTGCAGTTGGTGCCGTCATCTTATTCACCCTT
GGTTGTCTCATGTTCTACAGACACAGAAAAATCGAAAAAGGACGCAGAGA
CATACACCATCCGCTACGAATCAACACCCAGTGGTATCCGAACATCTGAC
ATCACCAATGGCTTCAAATTGAAACTCTTAAGCCAAAAGATCACAAAATC
TTTCTCAGTCGGTCTCGGCAATTTATACGCTGTCACATTCTATCAAGCAC
TTACTGAAGCCGAGCGTCGTAAATTACAATCTGTAGCGTCAGATGTTGCG
GCGGGAACTACGGTAGCCGAGATCAGTGATTTCAATGAATGCGTCGACGG
AAAACAATCGTGCTACAATGGATTAAAATGTATCAATACACAATACTCCT
TCAGATGTGGATGCCCAGAAGGTTATGAAGTCAAAGAAAACAGATGTATA
CAAGTTTTGTTGGCTTCTCAATGTTTGCTGGTGGAAGCAAGCTGTGGATG
TCAAAATAACGGCCAATGTGGTGCAGATTTCACGTGTACTTGTCCTGATG
GCTTCTATGGCCCCATTTGCAACCAATATGTTCAAGTTGGTTGTATTAGC
TGAAAGAAAAGCGCTTTTGAATACCAAAAGAAGATGGCTAACCGAGGACA
ATTGACGCCAACAAACTTGAGTGAATACGAAGGACAGCACGGTCGCAGAG
GCTCCCCTTCCGCATCTGTAGTTGACGGTCACACCCGATACTCGATGGGT
GATATCGGTTCAGATGTTTACTCTTACAATGCGAATTACAATCAAGATCC
AAGTGCTTATTATGGTACACAAACTAGATTATCAATCCCTATGGACAATT
CTCAAGTCAATCCCGGTTATGAACCAACACCGGAACACCTTAGATTCCCA
TCGACCGGTAGTTATACAAACAACGGAAACATGGGAACTTACGGACAACC
GGAAACAGATAACGTATACAACCCGCATGCGCAAATGGGAAACTCGCCAA
ATACACAAGATAACACTAATACATTTACTAATACAACGACCAACCCAACC
GCCACAGATGAAGTTCCTCTGCATTAAAGGTTGATAGTAATGCCAAGACA
GTCATTTACGTTTGGGCTGGTGCAGTTGGTGCCGTCATCTTATTCACCCT
TGGTTGTCTCATGTTCTACAGACACAGAAAAATCGAAAAAGGACGCAGAG
ACATACACCATCCGCTACGAATCAACACCCAGTGGTATCCGAACATCTGA
CATCACCAATGGCTTCAAATTGAAACTCTTAAGCCAAAAGATCACAAAAT
CTTTCTCAGTCGGTCTCGGCAATTTATACGCTGTCACATTCTATCAAGCA
CTTACTGAAGCCGAGCGTCGTAAATTACAATCTGTAGCGTCAGATGTTGC
GGCGGGAACTACGGTAGCCGAGATCAGTGATTTCAATGAATGCGTCGACG
GAAAACAATCGTGCTACAATGGATTAAAATGTATCAATACACAATACTCC
TTCAGATGTGGATGCCCAGAAGGTTATGAAGTCAAAGAAAACAGATGTAT
ACAAGTTTTGTTGGCTTCTCAATGTTTGCTGGTGGAAGCAAGCTGTGGAT
GTCAAAATAACGGCCAATGTGGTGCAGATTTCACGTGTACTTGTCCTGAT
GGCTTCTATGGCCCCATTTGCAACCAATATGTTCAAGTTGGTTGTATTAG
CTGAAAGAAAAGCGCTTTTGAATACCAAAAGAAGATGGCTAACCGAGGAC
AATTGACGCCAACAAACTTGAGTGAATACGAAGGACAGCACGGTCGCAGA
GGCTCCCCTTCCGCATCTGTAGTTGACGGTCACACCCGATACTCGATGGG
TGATATCGGTTCAGATGTTTACTCTTACAATGCGAATTACAATCAAGATC
CAAGTGCTTATTATGGTACACAAACTAGATTATCAATCCCTATGGACAAT
TCTCAAGTCAATCCCGGTTATGAACCAACACCGGAACACCTTAGATTCCC
ATCGACCGGTAGTTATACAAACAACGGAAACATGGGAACTTACGGACAAC
CGGAAACAGATAACGTATACAACCCGCATGCGCAAATGGGAAACTCGCCA
AATACACAAGATAACACTAATACATTTACTAATACAACGACCAACCCAAC
CGCCACAGATGAAGTTCCTCTGCATTAAAGGTTGATAGTAATGCCAAGAC
AGTCATTTACGTTTGGGCTGGTGCAGTTGGTGCCGTCATCTTATTCACCC
TTGGTTGTCTCATGTTCTACAGACACAGAAAAATCGAAAAAGGACGCAGA
GACATACACCATCCGCTACGAATCAACACCCAGTGGTATCCGAACATCTG
ACATCACCAATGGCTTCAAATTGAAACTCTTAAGCCAAAAGATCACAAAA
TCTTTCTCAGTCGGTCTCGGCAATTTATACGCTGTCACATTCTATCAAGC
ACTTACTGAAGCCGAGCGTCGTAAATTACAATCTGTAGCGTCAGATGTTG
CGGCGGGAACTACGGTAGCCGAGATCAGTGATTTCAATGAATGCGTCGAC
GGAAAACAATCGTGCTACAATGGATTAAAATGTATCAATACACAATACTC
CTTCAGATGTGGATGCCCAGAAGGTTATGAAGTCAAAGAAAACAGATGTA
TACAAGTTTTGTTGGCTTCTCAATGTTTGCTGGTGGAAGCAAGCTGTGGA
TGTCAAAATAACGGCCAATGTGGTGCAGATTTCACGTGTACTTGTCCTGA
TGGCTTCTATGGCCCCATTTGCAACCAATATGTTCAAGTTGGTTGTATTA
GCTGAAAGAAAAGCGCTTTTGAATACCAAAAGAAGATGGCTAACCGAGGA
CAATTGACGCCAACAAACTTGAGTGAATACGAAGGACAGCACGGTCGCAG
AGGCTCCCCTTCCGCATCTGTAGTTGACGGTCACACCCGATACTCGATGG
GTGATATCGGTTCAGATGTTTACTCTTACAATGCGAATTACAATCAAGAT
CCAAGTGCTTATTATGGTACACAAACTAGATTATCAATCCCTATGGACAA
TTCTCAAGTCAATCCCGGTTATGAACCAACACCGGAACACCTTAGATTCC
CATCGACCGGTAGTTATACAAACAACGGAAACATGGGAACTTACGGACAA
CCGGAAACAGATAACGTATACAACCCGCATGCGCAAATGGGAAACTCGCC
AAATACACAAGATAACACTAATACATTTACTAATACAACGACCAACCCAA
CCGCCACAGATGAAGTTCCTCTGCATTAAAGGTTGATAGTAATGCCAAGA
CAGTCATTTACGTTTGGGCTGGTGCAGTTGGTGCCGTCATCTTATTCACC
CTTGGTTGTCTCATGTTCTACAGACACAGAAAAATCGAAAAAGGACGCAG
AGACATACACCATCCGCTACGAATCAACACCCAGTGGTATCCGAACATCT
GACATCACCAATGGCTTCAAATTGAAACTCTTAAGCCAAAAGATCACAAA
ATCTTTCTCAGTCGGTCTCGGCAATTTATACGCTGTCACATTCTATCAAG
CACTTACTGAAGCCGAGCGTCGTAAATTACAATCTGTAGCGTCAGATGTT
GCGGCGGGAACTACGGTAGCCGAGATCAGTGATTTCAATGAATGCGTCGA
CGGAAAACAATCGTGCTACAATGGATTAAAATGTATCAATACACAATACT
CCTTCAGATGTGGATGCCCAGAAGGTTATGAAGTCAAAGAAAACAGATGT
ATACAAGTTTTGTTGGCTTCTCAATGTTTGCTGGTGGAAGCAAGCTGTGG
ATGTCAAAATAACGGCCAATGTGGTGCAGATTTCACGTGTACTTGTCCTG
ATGGCTTCTATGGCCCCATTTGCAACCAATATGTTCAAGTTGGTTGTATT
AGCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012793XLOC_012793Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022780-exon-sc0000432-1575043694:210699..211318TCONS_00022780-exon-sc0000432-1575043694:210699..211318Clytia hemisphaericaexon
TCONS_00022780-exon-sc0000432-1575043694:210211..210333TCONS_00022780-exon-sc0000432-1575043694:210211..210333Clytia hemisphaericaexon
TCONS_00022780-exon-sc0000432-1575043694:209604..209966TCONS_00022780-exon-sc0000432-1575043694:209604..209966Clytia hemisphaericaexon
TCONS_00022780-exon-sc0000432-1575043694:208930..209044TCONS_00022780-exon-sc0000432-1575043694:208930..209044Clytia hemisphaericaexon
TCONS_00022780-exon-sc0000432-1575043694:206494..208315TCONS_00022780-exon-sc0000432-1575043694:206494..208315Clytia hemisphaericaexon
TCONS_00022780-exon-sc0000432-1510915933:210699..211318TCONS_00022780-exon-sc0000432-1510915933:210699..211318Clytia hemisphaericaexon
TCONS_00022780-exon-sc0000432-1510915933:210211..210333TCONS_00022780-exon-sc0000432-1510915933:210211..210333Clytia hemisphaericaexon
TCONS_00022780-exon-sc0000432-1510915933:209604..209966TCONS_00022780-exon-sc0000432-1510915933:209604..209966Clytia hemisphaericaexon
TCONS_00022780-exon-sc0000432-1510915933:208930..209044TCONS_00022780-exon-sc0000432-1510915933:208930..209044Clytia hemisphaericaexon
TCONS_00022780-exon-sc0000432-1510915933:206494..208315TCONS_00022780-exon-sc0000432-1510915933:206494..208315Clytia hemisphaericaexon
TCONS_00022780-exon-sc0000432-1491911889:210699..211318TCONS_00022780-exon-sc0000432-1491911889:210699..211318Clytia hemisphaericaexon
TCONS_00022780-exon-sc0000432-1491911889:210211..210333TCONS_00022780-exon-sc0000432-1491911889:210211..210333Clytia hemisphaericaexon
TCONS_00022780-exon-sc0000432-1491911889:209604..209966TCONS_00022780-exon-sc0000432-1491911889:209604..209966Clytia hemisphaericaexon
TCONS_00022780-exon-sc0000432-1491911889:208930..209044TCONS_00022780-exon-sc0000432-1491911889:208930..209044Clytia hemisphaericaexon
TCONS_00022780-exon-sc0000432-1491911889:206494..208315TCONS_00022780-exon-sc0000432-1491911889:206494..208315Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022780-proteinTCONS_00022780-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000432supercontigsc0000432:206494..211318 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0500744	0.0366229	0.0141742	0.0416018	0.253231	0.133404	1.27148	1.56703	1.9727	2.14297	0.938544	8.41236	10.1324	7.76443	87.6262	37.6695	12.1982	10.3836	1.84975	1.55965	0.0242074	0.0354226	0.100475	0.0652475	0.0134407	0.0119955	0	0.0183195	0.0555787	0.0707824
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001881EGF-like_Ca-bd_dom
IPR000742EGF-like_dom
IPR013032EGF-like_CS
IPR000152EGF-type_Asp/Asn_hydroxyl_site
IPR018097EGF_Ca-bd_CS
IPR009030Growth_fac_rcpt_
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00022780 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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