TCONS_00023323 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023323
Unique NameTCONS_00023323
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2671

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023323 ID=TCONS_00023323|Name=TCONS_00023323|organism=Clytia hemisphaerica|type=transcript|length=2671bp
AAATAATAaagatacaaaaataaaaaacaatgtcTGCAATGCAAAGGGAT
ATCATGAAAAGCAAATTACCACCTTTGCCAAGTAAACCTGTTGGTCAAGC
ATCAAGATTTTCAAGTCTTGTTCCAAAAAGAAATGTCAAAGATTACTCCC
CATCCTCATGGGAAGGATATTTTGATAAACAGCATGATGTCAAAGTTGGA
GAGaatACATTTAGGTTATATACCAGAGGTACAGATGGACCAGTAGTCTT
ACTTCTTCACGGTGGTGGACATTCAGCACTATCATGGGCAGTCTTTACGA
AAACCCTATGTGATATGTGTGATTGCCAAGTTGCTGCTATTGATTTTCGA
GGTCATGgagACTCAAGTACAACCAATGATACCAACATGGCAGCTGATGT
AATGGCTTATGATATCTGTCATGTTATACTGAATTTCTATGACCAATCAC
CACCTCCAATTGTTATGATGGGCCATAGTATGGGAGGTGCAATCGCTGTT
CACATCGCTGCAAAAAAGATTCTTCCAAATTTGAGTGGCCTTGCTGTTAT
AGATGTAGTGGAAGGGACTGCACTAGATGCACTGTCTTCAATGCAAAGTT
TTCTTCGAAGTAGACCTCAGAAGTTTAGTTCTCTGAAACAAGCTATTGAA
TGGAGTATAAGGTCAGGGCAGCTGAGGAATCTTACTTCTGCTAAGATATC
AATGGCAGGGCAACTAAAAAAGGTTGAAGGAACGAGCAGTCAATCAAGCA
ATGTATCCTTAGATATTGTTGAAGAAACAGAAGAGGAGGTTGAAAATGAA
CAAACCTCATTTTCCTCAACATCAATAAGCGAGGAACAGTCAGAGTATAC
TTGGAGGGTCGATTTAgcagaaactgaaaaatattgGAAAGGATGGTTTG
AGAATATGTCATCACTTTTTGTTTCTTGCCCAGTTCCAAAGCTACTTTTA
CTAGCAGGAATAGATAGACTTGATAAAGATCTGACAATAGGTCAAATGCA
AGGGAAATTTCAGATGCAAGTTCTACCTAATTGCGGACATATGGTTCACG
AGGATGTGCCAGATAAGGTTGCAGAAATCCTTACTGCCTTTCTATTGAGA
CAAAAATTGACTGTGGCTAAAAGCAATTTTGAAAGacacacACCATCTTG
CTGACATATTCTGGTTcatgttgttttatttttttcaaactttataaaaa
ttgtacatagtaaaaagatttttaagttattttctaaaatttcctaaaat
taggTATcatcttttctcttctttttctcATCAAACTTTGCCCATGCATT
CTTTTGTCAGTTATATTATATTCATGTTGTTAAATCccattcctttttat
aatagaaaaGATAGAAAAGCATAATTGAGTAAAATGGCAGCGAAAAGGAA
GAAAACATCTGATGGAAATAGCAGCACAACAAATAGTAATAAGTCACTGA
CCGCAACCGATGAtattgaagattttgaaaacgagagTGATCCTTTCTCC
AAACCATGGGAAGGATCTGATGCCATTTTGGTTGTGGAAAACAAGAAGTT
ATATGTCCATTCCAACATGCTATCTTTCTCTTCTCCTGTTTTCAAATCCA
TGTTCAATTCTGGTTATTTCAAAGAATCGAAAACTAAAACAGTTGATTTG
AAAGGCAAAAAATATGCAGATGTTGTGAATCTATTGAAAATGATATACCC
TCAATTTGAAATTGACCTGTGGATGACAACAATATCAGAGCTTCAAGTGA
TGATGACACTGATCGAAGAATACCTCATCAAATCATTACGTAAAAGAATT
GAAGACCACACCCTCTACATTGCCAACATCAAAATACTGAATGGTGGTTA
TCAAGAAGTTTGTGCATTGGATCTGATGTTACTGGCAGATCTGTTTAATT
TCAATGATACTATAGACCAATGTGCGAAATATATAGGTGCTCGATATTAT
TATACTGACCATTCCAATGAATCGACTTTTTCTATGGATACGGACGATGA
AGACACCGAGGACAGCCCGTCAatgaaagaatttttccaagtccATAAAT
TAACAGATAAAGCCAAATTAAAAATCATGGTCAACATTGGTAAGAAGCAT
TTAGAGTTTATTGAAGAGGAGAGAGATGATATGTATAAAGAAATGATGAC
TAAGCGAACGCGCGAACATTCCTATTTGAAAAGTGAGATGTGTCGCAGGA
AAATGGAAGATTTGAAGATAGTAATGAATGAAATGACGTTATTGATTAAA
TGAAGATTAATTGGTAGGTTTACTTTTATTCAGAGAAGCCTGTTCTTTAT
GGTGTTTCCATCTTCAACCTTATGTTGCTTTCTTTTAATCGAACGAAATT
GTAATGATACGTTTTTGCTTTATCTgggtaaaaataatttgaaattattt
tgcaaCCAACTATAACATAGAAAACGTGAATCATGGAATTCAATATAAAT
GCAGTATTTTGATgagaaggaaaaacaaattgatGTGAACAAATTCTTAA
TTTATGAGACAATGCGCAAGGAATCATTTTACGATCAATCAATCTTTGCT
TAATTTAAATGGTGTTTTTGTTGCCTATTTATGGGctgttttttatttca
cttttgtATATGATATTTTTGTATAGGCTTTTTGTAAACTTAGTAATCAT
GAGATGATGTATATACAAGCA
Run BLAST on NCBI

transcript from alignment at sc0000450:248187..258130-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023323 ID=TCONS_00023323|Name=TCONS_00023323|organism=Clytia hemisphaerica|type=transcript|length=9944bp|location=Sequence derived from alignment at sc0000450:248187..258130- (Clytia hemisphaerica)
AAATAATAAAGATACAAAAATAAAAAACAATGTCTGCAATGCAAAGGGAT
ATCATGAAAAGCAAATTACCACCTTTGCCAAGTAAACCTGTTGGTCAAGC
ATCAAGATTTTCAAGTCTGTAAGTTTTTGTTAAAAAATTCTTGAAACATA
TTTTGATGTATTCTATGTTTAATTCTAATTCTGTCCTTTTTAAAATAACC
AAATGCTGTATAAAATGCTACCTGGAATTATTTATCATCATCATCATGAT
AAGTAAAATCATTAACTTTAAATTTTCAGTGTTCCAAAAAGAAATGTCAA
AGATTACTCCCCATCCTCATGGGAAGGATATTTTGATAAACAGCATGATG
TCAAAGTTGGAGAGAATGTATTTTTTCATTTTATTTCGACTATTTACTAA
CTTCTTTCGTTATCTGTCGTACCTGTAAAATGAGTGACCCTGGAGACTAA
CCTTTGATAAGTTCTTTGTTAGGAAGTAGTGTAAACCTGTCTGAAGACTA
ATGCATTCACTTTTAACTTTCACTTACTCACACTCCTTTAACCCTTTCTC
CTTGGAGTGATAAGGAGTGCTATGCACAACTTTTATTAGTGAAGTCTAAA
TTTTATTGTGTACAACTGATCACCATCCTCAGAGATTTTTGGAGGTGTGT
CTGCGCTAATCCCAACCTCAAATATGCTGCCTGTAGATACAACAACTTCT
CTGATAAAGTAGATGCTATGTGTTTAAACTTAGAGCTCTAAACTCTTATC
TGAATTTTCTATTTAAAGACATTTAGGTTATATACCAGAGGTACAGATGG
ACCAGTAGTCTTACTTCTTCACGGTGGTGGACATTCAGCACTATCATGGG
CAGTCTTTACGGTATGTTTTGAAGCTTTAGCATCTTTTGATATTGGTTGA
TAAATTATGGTGGGTGAAGTAATGATAATATTAATAACAAATAAAATGTT
CTTTACTACACCCATTGTCCCACAAAAATTATTCTTTTTCCATCCTTTTA
AAAATATCTTGTTTAATAAACAGGTTCGATTATACATTCTCATTGAAGGT
TCTTCAGATTGAAGATTCTTCAAATAGAGTCTAACCCAAGCACATGATCT
TCTAATTTTTAGAAAACCCTATGTGATATGTGTGATTGCCAAGTTGCTGC
TATTGATTTTCGAGGTCATGGTAAGTTTTCAACAGGGACAAACTTTCTAG
ATAAATTAATGAATCTGTATAAAAACATTATGGCAAAGCATTTTTATGAC
TTTTGTTAGCTCATCCTTTGTTCCAAATGGTACATTGCTTACTTTTTGAT
CTTATTACCACATTCCTTAGTTTAATACTCTTATCAATGATTCTTTGGTA
CCTAATAAACAGGGAGGGGTTGGAACAATTGGTTTTTGTGGAAAGAAATT
GCAGCAGGGTTGGAATAAAAATGTCTTCGGATTTCCATTAATTGATAAAT
AGGAAAAACTTGATAGGTCTGAGAGTATTGTTAAAAAAAGTGAACAAAGC
AAATTTAAAAAAAACTTGAACTTTTTAACAATAGAAAATTTCAGACCAGA
GATTTATTTAAGGTAATGTTGATAAATATTGAAGCATCGTTAGAGCTTTT
GATTCTTATTAATAAAATCTCTTGCTCTTAATCATCAGTGAACTATTTTC
TTGGTTAAAATACTTGATGTGAGTTCTCACTGTTTCTCACTTAGTTATTG
TCTTTTTTGTTTTTAGGAGACTCAAGTACAACCAATGATACCAACATGGC
AGCTGATGTAATGGCTTAGTATGTAACACTTGATGAATAAGGATAGTGAT
AATTTGTAATGTAAGGGTACAATATAATGTTACTTTACAAATGCATTTAC
TTCTGTTCTTTTTAGTGATATCTGTCATGTTATACTGAATTTCTATGACC
AATCACCACCTCCAATTGTTATGATGGGCCATAGGTATGTGTAAGAATAT
TTTTTAATGTAGTAATTATTTGTTTTTTTGAAACTTTTAGTTTTTTGACC
TACCCCGGTGGGGTGGAGGTCCTATAAATTAACCCATGTTCGTTCGTTCG
TTAGTTAGTGTGTTAGTTACCAGCTTTTCTCGAGATTGGCTCATTAGTTT
TTTCTGATTTTTGGCACAAAGGTGCATGACCATAAACCCTCAAATGTGAC
GGAGCCCGATTTTCTAAAAAAAAATTTTTTANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAT
TTTTTTTGTATTTTGACCAGTTATGTCTTATGTGTTTCATTGTTTCAATG
TTCACTGATTAGTTTGATAACCAGGTAGGTCCATAAAAGTATCGCTTGTT
CTATATTATGTTTATTCTTCTAGCACTGAGGTAGCACACAGCTTACAAAA
GATCTTTCTTTTTCCTATCGGCTTTTTTTTTAGTATGGGAGGTGCAATCG
CTGTTCACATCGCTGCAAAAAAGATTCTTCCAAATTTGAGTGGCCTTGCT
GTTATAGATGTAGTGGAAGGTTGTGATTTTTCTTTGTTATTATTTGTAAT
TATTTCAGACTAATTTTGCTAAGGAAGCTTTTGAAAGTACGACTGTTATT
TCAAAATCAGCTTTTTAAAAAAGGGGTTATTACATTGGTCATGCCGTGTA
CACTTATATCATGATTTATTGGATCGTCTGATTTATTGGATATTTGTTTC
ATATAAGTTTTTTTGACATCCATCAATTACATCAAATCTTTGAAAAACTG
GACATGTAAATCTATCGAATTCTTTCCCAAAACGAGATATGTTTCCATGT
TATAATGTAACAAATCAACTTTTCATCCAATGAACTATGTTCAGTATTGT
TTTATGTTTAATATTGTTTTAACATCTAATTTTCATTCAGGGACTGCACT
AGATGCACTGTCTTCAATGCAAAGTTTTCTTCGAAGTAGACCTCAGAAGT
TTAGTTCTCTGAAACAAGCTATTGAATGGAGGTAAATGCTTTAGTATTCA
AGGGATAGTCAGACGGTTTGAGATATTTAGCCTGCATAAACGTACGTTCT
GTGATCCTGAGTAGGATATTAAACTTTGTACTTTTAAATCTTTGTACTGA
TAATTTTGTCAAAAGAGTGCTTAGGTAAAATCGTAAATTGCATTTGAAAA
TTTACTTTAAAGCTATCTTACAATTTCCTTTCAGTATAAGGTCAGGGCAG
CTGAGGAATCTTACTTCTGCTAAGATATCAATGGCAGGGCAACTAAAAAA
GTAAGTATCGCTGTTAAAATCTTTGATAGAAAACATTTCAGATCTAGCAA
TTTTATCAAACCAAAGTCTTGTGTTGATAAGTATTTTGTTCCAGATGTTA
TATATTTTCATCTGATTTTAGGGTTGAAGGAACGAGCAGTCAATCAAGCA
ATGTATCCTTAGATATTGTTGAAGAAACAGAAGAGGAGGTTGAAAATGAA
CAAACCTCATTTTCCTCAACATCAATAAGCGAGGTATATTATTCTAAGCT
TTTTCACTTTCAGAAAAATTCCCATTTTAAACTTATTTAAGTAGCAACTT
TGTTTTCATCATTTATACTTTGGTCATTTTGCTTTTTAGGAACAGTCAGA
GTATACTTGGAGGGTCGATTTAGCAGAAACTGAAAAATATTGGAAAGGTA
TGGAAATTCCTTTGCTGTTGTACATGTTTTTACTTATCGATTTTGATGAT
TTCAAATGATGTGCTGATTTTTTCTTCTCTCGTTGTAGGATGGTTTGAGA
ATATGTCATCACTTTTTGTTTCTTGCCCAGTTCCAAAGCTACTTTTACTA
GCAGGTAAAGATTATCTGTGGCCGGAAAGCTCAGTCGGTAGAGCATTTAC
CTTACAATGGTTGTTGGTACCTTCCGGTTCCTCGGTCACCCCCAACTCAG
CCAGCAAATGAGTAGCTTAGATTGGGTAATCTGATCTATGCAGTAACTTA
CTGGAAGCTGTAGGTGTGGCCCTCCATCTCAGCATTTGAACTCCCAGGTC
TAGTGTAAATAGAAAAGACTAGACTAGATAGACTCCCTTGCTCTCGGCTC
TGCCAACAGCCACCTGATGAATATACTTTTACTTTTGTTTTACTTACCTA
AAGTTTATGCAAAAGAAAACATTAAGTCAAGAATTAAAAGTAATGTTTTA
TTTGCCAGTGCAACTTTAAATGTCAGTTAACATTAATATATGGTCTTCTT
TCTTATTGATTCAAACATGCTTTTACATTTCTAGGAATAGATAGACTTGA
TAAAGATCTGACAATAGGTCAAATGCAAGGTATTTTTAGTATTTAAAATT
TTTGGTATTTTATTTATTGAAAATGTATAACGGGAAAATGAGGAATAGGG
TATAACCTTTAAGACATTGGGCAAAGGAAGAACTCTTTATTTAATGTTTT
TAAAAATCTATGTCTTATGTTTTATCCATTTTTGTGTTTTCGCATCAAGT
AATTTATGATATTGTGATATATCAGACAGTGAACTCGTTGGTAAAGCAGA
ATTAACTGGTCCAATGAAAACTTGTGAATCTTCGTATTTTAGGGAAATTT
CAGATGCAAGTTCTACCTAATTGTGGACATATGGTTCATGAGGATGTACC
AGATAAGGTAAGCATTTGATCTCGTAAACTCAGTGGCAAAGTTCTGTCTT
AAATTCAAGCCTGAAGCTGTCTTTACAAATATGATACTTCACTTACGACG
GAAACGCATGATTGTAAGAAGATAGGGTTAGAGGCCCAGTGCAGTGTGCC
TAACTGTAAATAAAACTCTATAATAGAATTGACAAACAAATGGAATGATA
AGATCTATAAATTGTAAAGATGTAAGATTGTTTCCTAGAGGTCAATAGAC
CTGAGAAATACACTTCTATAAATAAATAAATATTGTGTGAATAGTTTAAA
TGTTCTAGGGTTGGTTGGTAAATTTCTTGAAGTCGGTAGAATCATGTTCT
ATTTCTAATGGTACTTTAACTTTGAATTAAATTTCTTCTGTAACGATTTT
CTTAGGTTGCAGAAATCCTTACTGCCTTTCTATTGAGACAAAAATTGACT
GTGGCCAAAAGCAATTTTGAAAGGTAAGCTTACTTTAAGTTAATAATTAG
GAACATTACATGGTCCACCTCCAGTGATTGCTGGAAATTTTAACCTTTTT
TTTTTTTTTTCAGACACACACCATCTTGCTGACATATTCTGGTTCATGTT
TTTATTTTTTTTTCAAACTTTATAAAAATTGTACATAGTGAAAAGATTTT
TAAGTTATTTTCTAAAATTTCCTGAAATTAGGTATCATCTTTTCTCTTTT
TTTTTCTCATCAAACTTTGCCCATATGCATACTTTGTTTGTCAGTTATAT
TATACCCATGTTGTTAAATCTCATTCCTTTTTATATTAGAAGAGATAGAA
AAGTATAGTTGAGTAAAATGGCAGCAAAAAGGAAGAAAACATCTGATGGG
AATACCAGTGCAACAAATAGCAATAAGTCACTGACTGCAACCGATGATAT
TGAAGATTTTGAAAACGAGAGTGATCCTTTCTCCAAGCCATGGGAAGGAT
CTGACGCCATTTTGGTTGTGGAAAACAAGAAGTTATATGTCCATTCCAAC
ATGCTATCTTTCTCTTCTCCTGTTTTCAAATCCATGTTCAATTCTGGTTA
TTTCAAAGAATCAAAAACTAAAACTGTTGATTTGAAAGGCAAAAAATATG
CAGATGTTGTGAATCTATTGAAAATGATATACCCTCAGTTTGAAATTGAT
CTGTGTAAGTACCTTGGCCATTTTACTTATTCCAAAGTCTACATAGATTA
CTGATAATTACTGTACCTTTCTTCTTTTCTTTGTAAAACTTTTTCTTCAG
ATATATCTCCTATCTGGGGTTGTTAAGATGTCTCTTAACTTTGAAACTTA
CATTCTTCTAATATCTGCTCCAACAATTAAGTCAGAAAAAAGGATCCCTA
ACTTTGGGATAAAGGGTTGGCTCTAAGAGTTGGTTAGGCTGGGAAGTGAA
AGAGTGGCTACAACACTAGCGACTAATTGACATGGACAATGGTATAAAAT
ACTGACAATTCTATACTTTATTATTTAATTGTTTCTCAAGGGATGACAAC
AATATCAGAGCTTCAAGTGATGATGACACTGATCGAAGAATACCTCATTA
AGTCATTACGTAAAAGAATTGAGGACCACACCCTCTACATTGCCAACATC
AAAATACTGAATGGTGGTTATCAAGAAGTTTGTGCTTTGGATCTGATGTT
ACTGGCAGATCTGTTTAATTTCAATGATACTATAGACCAATGTGCAAAAT
ATATAGGTGCTCGATATTATTATACTGACCATTCCAATGAATCGACTTTT
TCTATGGATACGGACGATGAAGACACCGAGGACAGCCCGTCAATGAAAGA
ATTTTTCCAAGTCCATAAATTAACAGATAAAGCCAAATTAAAAATCATGG
TCAACATTGGTAAGAAGCATTTAGAGTTTATTGAAGAGGAGAGAGATGAT
ATGTATAAAGAAATGATGACTAAGCGAACGCGCGAACATTCCTATTTGAA
AAGTGAGATGTGTCGCAGGAAAATGGAAGATTTGAAGATAGTAATGAATG
AAATGACGTTATTGATTAAATGAAGATTAATTGGTAGGTTTACTTTTATT
CAGAGAAGCCTGTTCTTTATGGTGTTTCCATCTTCAACCTTATGTTGCTT
TCTTTTAATCGAACGAAATTGTAATGATACGTTTTTGCTTTATCTGGGTA
AAAATAATTTGAAATTATTTTGCAACCAACTATAACATAGAAAACGTGAA
TCATGGAATTCAATATAAATGCAGTATTTTGATGAGAAGGAAAAACAAAT
TGATGTGAACAAATTCTTAATTTATGAGACAATGCGCAAGGAATCATTTT
ACGNTTCTAGGAATAGATAGACTTGATAAAGATCTGACAATAGGTCAAAT
GCAAGGTATTTTTAGTATTTAAAATTTTTGGTATTTTTGAAAATGTATAA
CATGTTTTATTGCTTCTCCCAGGAAAATGAGGAATAGGGTTTTAACTTAT
ATGAAATTGGGCAAAGGAAGAACTCTTTTTTGATGTATTTAAAAATTTAT
ATCTTATGTTTTATCCATTTTTGTGTTTTTGCATCAAGTAATTTATGATA
GTGTGATACATCAAACAGTGAACTCGATGGTAAATTGGAATTAACTGGTC
CAATGAAAACCTGTGAATCTTCGCATTTTAGGGAAATTTCAGATGCAAGT
TCTACCTAATTGCGGACATATGGTTCACGAGGATGTGCCAGATAAGGTAA
GCATTTGATCTTGTACACTCTGTAGCAAAATTCTATCTTAAATTCATACC
TTTTAAAGGCTGTCTTCACAAATATGATATTTCACATTGTGTACATTCCC
TAGGGTCGGTTGGTAAATTTCCTGAAGTCGGTAGAATCCTGTTCTGTTTC
TAATGGCACTTAAACTTTGAATTAAATTTCTTTTGTAACGATTTTTTAGG
TTGCAGAAATCCTTACTGCCTTTCTATTGAGACAAAAATTGACTGTGGCT
AAAAGCAATTTTGAAAGGTAAGAAATCTGCTTACTTTAAATTAATTAATT
AGGAATCATTACATGGTCCACCTCCAGTAATTGCTGGAAATTTTAACCTT
TTTATTATTTTTTTTCAGACACACACCATCTTGCTGACATATTCTGGTTC
ATGTTGTTTTATTTTTTTCAAACTTTATAAAAATTGTACATAGTAAAAAG
ATTTTTAAGTTATTTTCTAAAATTTCCTAAAATTAGGTATCATCTTTTCT
CTTCTTTTTCTCATCAAACTTTGCCCATGCATTCTTTTGTCAGTTATATT
ATATTCATGTTGTTAAATCCCATTCCTTTTTATAATAGAAAAGATAGAAA
AGCATAATTGAGTAAAATGGCAGCGAAAAGGAAGAAAACATCTGATGGAA
ATAGCAGCACAACAAATAGTAATAAGTCACTGACCGCAACCGATGATATT
GAAGATTTTGAAAACGAGAGTGATCCTTTCTCCAAACCATGGGAAGGATC
TGATGCCATTTTGGTTGTGGAAAACAAGAAGTTATATGTCCATTCCAACA
TGCTATCTTTCTCTTCTCCTGTTTTCAAATCCATGTTCAATTCTGGTTAT
TTCAAAGAATCGAAAACTAAAACAGTTGATTTGAAAGGCAAAAAATATGC
AGATGTTGTGAATCTATTGAAAATGATATACCCTCAATTTGAAATTGACC
TGTGTAAGTATATTGGTTATTTTACTTTATTCCAAAGTGATAAATTCTGT
ATCTTTCCTTTTCTTGGTAAAACTTTTTCTCCAAATAAATCACCTACCTA
GGGGTCTTAAGATGTCTCTTAACTTTGAAAAATGCATTTTTCTAAAGTCT
GCTTTTCCCTAACTCCAAAAATGAAGTCCGAAAAAAGGATCCCTAACTTT
GTGAAAAAGGGTTGGCTCTAAGATAAGAGTTGGTTAGGCTGGAAAGTGAA
AGAGTGGCTACTGCAGCACTAGCGACTAATTGACATGGGCAATGGGTATC
AAATACGGACAATTCTATACTTATTATTTAATTGTTTCTCAAGGGATGAC
AACAATATCAGAGCTTCAAGTGATGATGACACTGATCGAAGAATACCTCA
TCAAATCATTACGTAAAAGAATTGAAGACCACACCCTCTACATTGCCAAC
ATCAAAATACTGAATGGTGGTTATCAAGAAGTTTGTGCATTGGATCTGAT
GTTACTGGCAGATCTGTTTAATTTCAATGATACTATAGACCAATGTGCGA
AATATATAGGTGCTCGATATTATTATACTGACCATTCCAATGAATCGACT
TTTTCTATGGATACGGACGATGAAGACACCGAGGACAGCCCGTCAATGAA
AGAATTTTTCCAAGTCCATAAATTAACAGATAAAGCCAAATTAAAAATCA
TGGTCAACATTGGTAAGAAGCATTTAGAGTTTATTGAAGAGGAGAGAGAT
GATATGTATAAAGAAATGATGACTAAGCGAACGCGCGAACATTCCTATTT
GAAAAGTGAGATGTGTCGCAGGAAAATGGAAGATTTGAAGATAGTAATGA
ATGAAATGACGTTATTGATTAAATGAAGATTAATTGGTAGGTTTACTTTT
ATTCAGAGAAGCCTGTTCTTTATGGTGTTTCCATCTTCAACCTTATGTTG
CTTTCTTTTAATCGAACGAAATTGTAATGATACGTTTTTGCTTTATCTGG
GTAAAAATAATTTGAAATTATTTTGCAACCAACTATAACATAGAAAACGT
GAATCATGGAATTCAATATAAATGCAGTATTTTGATGAGAAGGAAAAACA
AATTGATGTGAACAAATTCTTAATTTATGAGACAATGCGCAAGGAATCAT
TTTACGATCAATCAATCTTTGCTTAATTTAAATGGTGTTTTTGTTGCCTA
TTTATGGGCTGTTTTTTATTTCACTTTTGTATATGATATTTTTGTATAGG
CTTTTTGTAAACTTAGTAATCATGAGATGATGTATATACAAGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013112XLOC_013112Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023323-exon-sc0000450-1575043694:258013..258130TCONS_00023323-exon-sc0000450-1575043694:258013..258130Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1575043694:257764..257851TCONS_00023323-exon-sc0000450-1575043694:257764..257851Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1575043694:257270..257362TCONS_00023323-exon-sc0000450-1575043694:257270..257362Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1575043694:256961..257018TCONS_00023323-exon-sc0000450-1575043694:256961..257018Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1575043694:256363..256414TCONS_00023323-exon-sc0000450-1575043694:256363..256414Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1575043694:256197..256265TCONS_00023323-exon-sc0000450-1575043694:256197..256265Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1575043694:255212..255297TCONS_00023323-exon-sc0000450-1575043694:255212..255297Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1575043694:254750..254840TCONS_00023323-exon-sc0000450-1575043694:254750..254840Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1575043694:254481..254546TCONS_00023323-exon-sc0000450-1575043694:254481..254546Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1575043694:254248..254359TCONS_00023323-exon-sc0000450-1575043694:254248..254359Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1575043694:254084..254141TCONS_00023323-exon-sc0000450-1575043694:254084..254141Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1575043694:253927..253992TCONS_00023323-exon-sc0000450-1575043694:253927..253992Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1575043694:253452..253496TCONS_00023323-exon-sc0000450-1575043694:253452..253496Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1575043694:250435..250499TCONS_00023323-exon-sc0000450-1575043694:250435..250499Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1575043694:250164..250231TCONS_00023323-exon-sc0000450-1575043694:250164..250231Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1575043694:249478..250062TCONS_00023323-exon-sc0000450-1575043694:249478..250062Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1575043694:248187..249137TCONS_00023323-exon-sc0000450-1575043694:248187..249137Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1510915933:258013..258130TCONS_00023323-exon-sc0000450-1510915933:258013..258130Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1510915933:257764..257851TCONS_00023323-exon-sc0000450-1510915933:257764..257851Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1510915933:257270..257362TCONS_00023323-exon-sc0000450-1510915933:257270..257362Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1510915933:256961..257018TCONS_00023323-exon-sc0000450-1510915933:256961..257018Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1510915933:256363..256414TCONS_00023323-exon-sc0000450-1510915933:256363..256414Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1510915933:256197..256265TCONS_00023323-exon-sc0000450-1510915933:256197..256265Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1510915933:255212..255297TCONS_00023323-exon-sc0000450-1510915933:255212..255297Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1510915933:254750..254840TCONS_00023323-exon-sc0000450-1510915933:254750..254840Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1510915933:254481..254546TCONS_00023323-exon-sc0000450-1510915933:254481..254546Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1510915933:254248..254359TCONS_00023323-exon-sc0000450-1510915933:254248..254359Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1510915933:254084..254141TCONS_00023323-exon-sc0000450-1510915933:254084..254141Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1510915933:253927..253992TCONS_00023323-exon-sc0000450-1510915933:253927..253992Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1510915933:253452..253496TCONS_00023323-exon-sc0000450-1510915933:253452..253496Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1510915933:250435..250499TCONS_00023323-exon-sc0000450-1510915933:250435..250499Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1510915933:250164..250231TCONS_00023323-exon-sc0000450-1510915933:250164..250231Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1510915933:249478..250062TCONS_00023323-exon-sc0000450-1510915933:249478..250062Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1510915933:248187..249137TCONS_00023323-exon-sc0000450-1510915933:248187..249137Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1491911889:258013..258130TCONS_00023323-exon-sc0000450-1491911889:258013..258130Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1491911889:257764..257851TCONS_00023323-exon-sc0000450-1491911889:257764..257851Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1491911889:257270..257362TCONS_00023323-exon-sc0000450-1491911889:257270..257362Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1491911889:256961..257018TCONS_00023323-exon-sc0000450-1491911889:256961..257018Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1491911889:256363..256414TCONS_00023323-exon-sc0000450-1491911889:256363..256414Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1491911889:256197..256265TCONS_00023323-exon-sc0000450-1491911889:256197..256265Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1491911889:255212..255297TCONS_00023323-exon-sc0000450-1491911889:255212..255297Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1491911889:254750..254840TCONS_00023323-exon-sc0000450-1491911889:254750..254840Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1491911889:254481..254546TCONS_00023323-exon-sc0000450-1491911889:254481..254546Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1491911889:254248..254359TCONS_00023323-exon-sc0000450-1491911889:254248..254359Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1491911889:254084..254141TCONS_00023323-exon-sc0000450-1491911889:254084..254141Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1491911889:253927..253992TCONS_00023323-exon-sc0000450-1491911889:253927..253992Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1491911889:253452..253496TCONS_00023323-exon-sc0000450-1491911889:253452..253496Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1491911889:250435..250499TCONS_00023323-exon-sc0000450-1491911889:250435..250499Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1491911889:250164..250231TCONS_00023323-exon-sc0000450-1491911889:250164..250231Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1491911889:249478..250062TCONS_00023323-exon-sc0000450-1491911889:249478..250062Clytia hemisphaericaexon
TCONS_00023323-exon-sc0000450-1491911889:248187..249137TCONS_00023323-exon-sc0000450-1491911889:248187..249137Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000450supercontigsc0000450:248187..258130 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.41316	3.75286	0.421521	0.57559	0.123433	0.0104845	0.0162679	0.0786153	0.254536	0.404093	3.49136	4.06985	2.45217	0.167208	0.19959	0.185752	5.07707	1.64495	0.32352	0.185694	4.37432	2.87501	4.68929	0.376931	0	0	0.037194	2.19352	1.15449	0.586747
Blast
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BLAST of TCONS_00023323 vs. Swiss-Prot (Human)
Match: PPME1 (Protein phosphatase methylesterase 1 OS=Homo sapiens GN=PPME1 PE=1 SV=3)

HSP 1 Score: 364.385 bits (934), Expect = 1.488e-116
Identity = 182/348 (52.30%), Postives = 246/348 (70.69%), Query Frame = 3 
Query:  138 KDYSPSSWEGYFDKQHDVKV----GENTFRLYTRGTDGPXXXXXXXXXXSALSWAVFTKTLCDMCDCQVAAIDFRGHGDSSTTNDTNMAADVMAYDICHVILNFYDQSPPPIVMMGHSMGGAIAVHIAAKKILPNLSGLAVIDVVEGTALDALSSMQSFLRSRPQKFSSLKQAIEWSIRSGQLRNLTSAKISMAGQLKKVEGTSSQSSN------VSLDIXXXXXXXXXXXXXXXXXXXXXXXXXXYTWRVDLAETEKYWKGWFENMSSLFVSCPVPKLLLLAGIDRLDKDLTIGQMQGKFQMQVLPNCGHMVHEDVPDKVAEILTAFLLRQKLTVAKSNFERHTPSC 1151
            +D+SP  W  YF+   DV+V    G++TFR+Y  G++GPV+LLLHGGGHSALSWAVFT  +     C++ A+D R HG++   N  +++A+ MA D+ +V+   Y   PPPI+++GHSMGGAIAVH A+  ++P+L GL +IDVVEGTA+DAL+SMQ+FLR RP+ F SL+ AIEWS++SGQ+RNL SA++SM GQ+K+ EG +S   +      +  +  E+ E      +        +++   YTWR++LA+TEKYW GWF  +S+LF+SCP+PKLLLLAG+DRLDKDLTIGQMQGKFQMQVLP CGH VHED PDKVAE +  FL+R +       F+   P C
Sbjct:   39 RDFSPVPWSQYFESMEDVEVENETGKDTFRVYKSGSEGPVLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGETKVKNPEDLSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTASSNLVPSLLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKSLENAIEWSVKSGQIRNLESARVSMVGQVKQCEGITSPEGSKSIVEGIIEEEEEDEEGSESISKRKKEDDMETKKDHPYTWRIELAKTEKYWDGWFRGLSNLFLSCPIPKLLLLAGVDRLDKDLTIGQMQGKFQMQVLPQCGHAVHEDAPDKVAEAVATFLIRHRFAEPIGGFQCVFPGC 386
The following BLAST results are available for this feature:
BLAST of TCONS_00023323 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PPME11.488e-11652.30Protein phosphatase methylesterase 1 OS=Homo sapie... [more]
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