TCONS_00023351 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023351
Unique NameTCONS_00023351
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1628

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023351 ID=TCONS_00023351|Name=TCONS_00023351|organism=Clytia hemisphaerica|type=transcript|length=1628bp
GAAAAGACAAAATTGCTCTTTGATGCAGCCCTTCCGGAAGAAGATTCGTC
GTTTTCAGATTTGCAAACTGTCTCATCTCTTCAAAAGAAACCAGCTTCCA
TCAATACAAAAAGTACAACATCTCACgaatcaacaaaatcaaacaaagag
CTTTCGTTTCCTATCCAAAAAGATCAAACAATGTCAGAAGATTATATGTT
ACCTTTTAAGAAGAAATCGTCTTCAAATGAAAATAAAAAGACAAAATTGC
TCTTTGATGCAGCCCATCCGGAAGAAGATTCGTCGTTTTCAGATTTGCAA
ACTGTCTCACCTCTTCAAAAGAAACCAGCCTCCATCAATACAAAAAGTAC
AACATCTCACgaatcaacaaaatcaaacaaagagCTTTCGTCTCCTATCC
AAAAAGATCAAACAATGTCAGAAAAAGAAGATATGTTTCCTTTTAAGAAG
AAATCATCTCCAAATGAAATTGCGTTTCCTTTTCCACTTGAGCAATCTTT
ATTAAGTACATCTGCTGCATCTCCTTTAGAAAGCAAAGCAACTCGGCAGA
TTAATTCTTTTTCATCGACCCAACAAGAAGAATCCCATCATAGTGCTGCA
CCTAAAGAAAAGACAAAATTGCTCTTTGATGCAGCCCTTCCGGAAGAAGA
TTCGTCGTTTTCAGATTTACAAACTGTCTCACCTCTTCAAAAGAAACCAG
CCTCCATCAATACCAAAAGTACAACATCTCACGAATCAACAAACTCAAAC
AAAGAGCTTTCGTCTCCTATCAAAAATGATCAAACAATGTCAGAAGAAGA
AGATATGTTACTTTTTAAGAAGAAATCATATCCAAATGAAAAAAAGACAA
AATTGCTTTTTGATGCAGCCCTTTCGGAAGAAGATTCGTCGTTTTCAGAT
TTGCAAACTGTCTCACCTCTTCAAAAGAAACCAGCCTCCATCAATACAAA
AAGTACAACATCTCacaaatcaacaaaatcaaacaaagagCTTTCGTCTC
CTATCCAAAAAGATCAAACAATGTCAGAAGAAGAAGATATGTTACCTTTT
AAGAAGAAATcggtttcaaatgaaaataAAAAGACAAAATTGCTCTTTGA
TGCAGCCTTTCCGGAAGAAGTTTCGTCGTTTTCAGATTTGCAAACTGTCT
CACCTCTTCAAAAGAAACCAGCCTCCATCAATACAAAAAGTACAACATCT
AACgaatcaacaaaatcaaacaaaaaactttcgtcTCCTATCCAAAAAGA
TCAAACAATGTCAGAAGAAGAAGATATGTTACCTTTTAAGAAGAAATCAT
CTCCAAATGAAAATAATGATAAGGATTATCAAGACATGACCAATTTTCTA
ATACAAATGGGTTTGGAAGAGGTCGAGAAACATTTACCTAGTGGAAACGa
tacATATCATACCAGATCGAAATCTGTTTCTTTGGAGGAACACAAGTTTG
CGCTTGCACAACAATTTTGCAGGAGCAAAAACGATCCTGATTATTTGATG
AAATCATGGATCGATGAATATATAGGTAACTTTGGAGAAGAGAATTGCAG
CCTTAAATTATAGTTATGAAGTAGCTCCTCCTCAAGATTCAATTGATTGT
GGCATTCAAGATTTGTGCATTATATTGC
Run BLAST on NCBI

transcript from alignment at sc0000452:98026..122075+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023351 ID=TCONS_00023351|Name=TCONS_00023351|organism=Clytia hemisphaerica|type=transcript|length=24050bp|location=Sequence derived from alignment at sc0000452:98026..122075+ (Clytia hemisphaerica)
GAAAAGACAAAATTGCTCTTTGATGCAGCCCTTCCGGAAGAAGATTCGTC
GTTTTCAGATTTGCAAACTGTCTCATCTCTTCAAAAGAAACCAGCTTCCA
TCAATACAAAAAGTACAACATCTCACgaatcaacaaaatcaaacaaagag
CTTTCGTTTCCTATCCAAAAAGATCAAACAATGTCAGAAGATTATATGTT
ACCTTTTAAGAAGAAATCGTCTTCAAATGAAAATAGTACGTTTCCTTTTC
CACTTGAGCCATCTTTATTAATTACATCTGCTGCATCTCCTTTAGAAAGC
AAAGCAACTCGGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNAATGGTTCGTCACTAATTGACGTTTTA
CAGAATTTATCATGTTTCCTGTTGTActagaaaaatcattttcaattacA
GATCCTGATTCTCCttcagaaaaaatatcaacttcgCCAATCAATTCTTT
CTCATCGATCCAACAGGAAAAATCATGTCAAAGTTCTGCACCTAAaggaa
taaatttttaaaaagcgcTAGGAACATGACATCAGTAGTGTTATTTAACC
CCTTTTAAGGCCGCTCTACCCACGAGAATAATAAGATGAATTCGACTAGA
ATTTTCTGTTTGAACTGTTATTCTTGTGCAAACTACACgcaagaattgaa
aaaaatgtaaattagataatacttgaagaattttcTAATATCCCTTTTAA
TGTTGAATTCTTCGTCAAACTACCCATAAGAATAAAAACCACGTGTCCTT
TTAAATGTCCGAACTGAAATTAATCATATACTCCACTACAATGTCTTGTT
CTAAGATTGAAGTTTCATtcttgtgaaaatggtaattatagcaCTATTAT
ACAAGAAGTtcatttcatcttcatttttNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNTTTATCATGTTTCCTGTTGTAct
agaaaaatcattttcaattacAGATCCTGATTCtccttcagaaaaaaaat
caacttcgcCAATCAATTCTTTCTCGTCGATCCAACAGGAAAAATCATGT
CAAAGTTCTTCACCCAAaggaataaatttttaaaaagcgaTAGGAACATG
ACATCAGTAGTGTTATTTAACTCTTTTTAAGGCCGCTCTACACACGAGAA
TAATAAGATGATTTCGACTAGAATTTTCTGTTTGAACTGTTATTCTTGTG
CAAACTACACAcaggaattgaaaaaaatgtaaattagataatacttgaag
aattttcTAATATCCATTTTAATGTTGAATTCTTCTTCAAACTACCCATA
AGAATAAAAACCACGTGTCCTTTTAAATGTCCGAACTGAAATCAATCATA
TACTCCACTACAATGTCTTGTTCTAAGATTGAAGTTTCNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNATGTCCGAACTGAAATCAATCATATACTC
CACTACAATGTCTTGTTCTAAGATTGAAGTTTCATtcttgtgaaaatggt
aattatagcaCTATTATACAAGAAGTccatttcatcttcattttttgaag
tttttcaaataactttttatttaaaattattccactcaacaatatctttc
caacggtaccaaAATTATTAAGATTGAAACATCTCTCTTTCTCCTAGAAA
AGACAAAATTGCTCTTTGATGCAGCCCTTCCGGAAGAAGATCCGTCGTTT
TCAGATTTGCAAACTGTCTCACCTCTTCAAAAGAAACCAGCCTCCATCAA
TACACAAAGTACAACATCTCACgaatcaacaaaatcaaacaaagagCTTT
CGTCTCCTATCCAAAAAGATCAAACAATGTCAGAAGAAGAAGATATGTTA
CCTTTGAAGNTAACTCTTTTTAAGGCCGCTCTACACACGAGAATAATAAG
ATGAATTCGACTAGAATTTTCTGTTTGAACTGTTAGTCTTGTGCAAACTA
CACGCAGGAATTGAAAACAAATGTAAATTAGATAATACTTAAAGAATTTT
CTAATATCCCCTTTAATGTTGAATTCTTCTTCAACTACCCATAAGAATAA
AAACCACGTGTCCTTGTAAATGTCCGAACTGAAATCAATCATATACTCCA
CTACAATGTCTTGTTCTAAGATTGAAGTTTCATtcttgtgaaaatggtaa
ttatagcaCTATTAAACAAGAAATCcaattcatcttcattttttgaagtt
ttccaaataactttttatttaagaTTATTCCACTCaacaatatctttcca
acggtaccaaATTTATTAAGATTGAAACATCTCTCTTTCTACTAGAAAAG
ACAAAATTGCTCTTTGATGCAGCCCTTCCNNNNNNNNNNNNNNNNNNNNN
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ATCTCACgaatcaacaaaatcaaacaaagagCTTTCGTCTCCTATCCAAA
AAGATCAAACAATGTCAGAAGAAGAAGATATGTTACCTTTTAAGAAGAAA
TCATCTCCAAATGAAAGTACGTTTCTTTTTCCACTTGAGCAATCTTTATT
AATTACATCTGCTGCATCTCCTTTAGAAAGCAAAGCAACTCGGCcaatta
attctttttcatcAACCCAACAAGAACAATCCCATCATAGTGCTGCACCT
AAAGGTAGTTAttactaaatttttgaaaagcgaTAAATAGTATCATGACA
ATTGTGCAACACTTTTCAGTCATTGTGAAATGCCTTAAGGGAAAATATGG
CGGATTTGGtgcattttgtttcttttctctaATGGTTTGTCACTAATTGA
CGTTTTACAGAATTTATCATGTTTCCTGTTGTActagaaaaatcattttc
aataaCACATCCTGATTCTCCTTcagaaataaaatcaacttcGCCAATCA
ATTCTTTCTCGTCGATCCAACAGGAAAAATCATGTCAAAGTTCTTCACCT
AAaggaataaatttttaaaaagcgaTAGGAACATGACATCAGCAGTGTTA
TTTAACCCTTTTTAAGGCCGCTCTACACACAAGAATAATAAGATGAATTC
GACTAGAATTTTCTGTTTGAACTGTTATTCTTGTGCAAACTGCACGcagg
aattgaaaaaaaatgtaaattagataatacttgaaaaattttctaatatC
CCTTTTAATGTTGAATTCTTCTTCAAACTACCCATAAGAATAAAAACCAC
GTGTCCTTTTAAATGTCCGAACTGAAATCAATCATGTACTCCACTTCAAT
GTCTTGTTCTAAGATTGAAGTTTCATTCTTGtgaaaatctatatattaat
acgcttaaacgtgtgtgtttacaaggttttgtaaaaagttttcgaaaatc
taacaaagctctacaaagcctcctcttcatggcgttgaaccatcatcttt
ttgcactttaagcagatttcctaccactagactaaatTTGAGACACCAAt
atgctattttctattcaccaagtttggagcttgatcagttaaaatcaacc
ttctttccaaatttcttttgtcaatttaaagaattcttattcagatattc
tttaaaactttctgtttacaatagcggctccctatcactttcaaaacttt
ttaaaacatttttatataatCTTTTGTCCCGGTTTCAACTTTggtttttt
tgaagaatgtgcaTTCTTCTGAACCAGTAAGCCAACTGTGGCTTGCATAA
AATTAGTTACTTCATTCAAGGATATAGTAAGAGtgtctttcaaactttca
ctttgaaattgtctttctaatctatatattaatacgcttaaacgtgtgtg
tttacaacgttttgtaaaaagttttcgaaaatctaacaaagctctacaaa
gcctcctcttcatggcgtTGAACCATCATCTTTTTTCTCCTTAAGCAGAT
TTCccaccactagactaactttgagaccccaagatactattttctattca
ccaacTTTGGAGCTTGatggtttttttctgtttacaatagcggctccctt
atcactttcaaaacttttcaaagtctttcaaagtcaccctcgaatgtcca
actacgatggctagccacgatggctaagacgatctaaaatatacttttgc
taagtcatttatttaattgtggtttaaaattgcaatgcaatgttaatttt
ttttctcttttatttcctaaaatcaaaatcaaatcatcgaTCCTTTCCGT
TAGAATTTTGTAGTGATTCACTGGATTGGTtcacgcagcgtgcgacgctg
cgcatacggctagtggTAATTATAGCACTATTAAACAAGAAggtcatttc
attttcattttttgaagtttttcaaataactttttatttaaaattattcc
gctcaacaatatctttccaacggtaccaaATTTGTTAAGATTGAAACATT
CCTTAAATGGTTACAGCCGAAACAAAAAAGATAAGAATACATTGATTTGA
TAATTTCTTGTTTTGTTTCTGTTTCTAGGCATGTCAATATGGTATCAGCC
AAGAGCGTTTAAGAAGAAAACAATAATGAGTGTCCTTTATCTTGGACACG
ATATTGTCGTTGGTAGAGAAAGCCTTTCCGAATGTGATGACAATAAGATG
GTAAAACTTTCTggactgaaaatcaaacaagcAAAAGAAATACTAAAAAC
TATGAGGAAAAAATATAATAAGGAAAGTGACCACACATTGTTTCAAGCCT
TTTATGAAAAGGCAAAATTGCTCTTTGATGCAGCCCTTCCGGAAGAAGAT
CCGTCGTTTTCATATTTGCAAACTGTCTCACCTCTTCAAAAGAAACCAGC
CTCCATCAATACACAAAGTACAACATCTCACgaatcaacaaaatcaaaca
aagagCTTTCGTCTCCTATCCAAAAAGATCAAACAATGTCAGAAGAAGAA
GATATGTTACCTTTGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNAATTACATCTGCTGCATCTCCTTTAGAAAGCAAAGC
AACTCGGCcaattaattctttttcatcGACCCAACAAGAACAATCCCATC
ATAAGTGCTGCACCTAAAGGTAGTTAttactaaatttttgaaaagtgata
gATAGTATCATGACATTTGTGCAACACTTTTCAGTCATTGTGAAATGCCT
TAAGGGAAAATATGGCGGATTTAGtgcattttgtttcttttctctaATGG
TTTGTCACTAATTGACCTTTTACAGAATTTATAATGTTTCCTGTTGTAct
agaaaaatcattttcaattacAGATCCTGATTCtccttcagaaaaaaaat
caacttcgcCAATCAATTCTTTCTCGTCGATCCAACAGTAAAAATCATGT
CAAAGTTCTTCACCTAAaggaataaatttttaaaaagtgataggAACATG
ACATCAGTAGTGTTATTTAACTCTTTTTAAGGCCGCTCTACACAcgagaa
taataaaatgaattggactaaaattttctgtttgaacTGTTATTCTTGTG
CAAACTAcacgcagaaatttaaaaaaaaatgtaaattagataatacttga
agaattttcTAATATCCCTTTTAATGttgaattctttttcaaactacCCA
TAAGAATAAAAACTACGTGTCTTTTTAAATGTCCGAACTGAAATCAATCA
TATACTCCACTACAATGTCTTGTTCTAAGATTGAAGTTTCATtcttgtga
aaatggtaattatagcaCTATTANTTTTCAGTCATCGTGATATGCCTTAA
GGGAAAATATGGTGGATTTGGtgcattttgtttcttttctctaATGGTTT
GTCACTAATTGACGTTTTACAGAATTTATCATGTTTCCTGTTGTActaga
aaaatcattttcaattacACATCCTGATTCtccttcagaaaaaaaatcaa
cttcgcTTATCAAATCTTTCTTGTCGATCCAACAGGAAAAATCATGTCAA
AATTCTTCACCTAAaggaataaatttttaaaaagcgaTAGGAACATGACA
TCAGTAGTGTTATTTAACCCTTTTTAAGGCCGCTCTACACACGAGAATAA
TAAGATGAATTCGACTAGAATTTTCTGTTTGAACTGTTATTCTTGTGCAA
ACTGCACGcaggaattgaaaaaaattgtaaattagataatacttgaagaa
ttttcTAATATCCCTTTTAATGTTGAATTCTTCTTCAAACTACCCATAAG
AATAAAAACCACGTGTCCTTTTAAATGTCCGAACTGAAATCAATCATATA
CTCCACTACAATGTCTTGTTCTAAGATTGAAGTTTCATtcttgtgaaaat
ggtaattatagcaCCATTAAACAAGAAGTtcatttcatcttcattttttg
aagtttttcaaataactttttatttaaaattatctcactcaacaatatct
ttccaacggtaccaaATTTATTAAGATTCAAACATCTCTCTTTCTACTAG
AAAAGACAAAATTGCTCTTTGATGTAGCCCTTCCGGAAGAAGATTCGTCG
TTTTCAGATTTGCAAACTGTCTCACCTCTTCAAAAGAAACCAGCCTCCAT
CAATACAAAAAGTACAACATCTCACgaatcaacaaaatcaaacaaagtgC
TTTCGTCTCCTATCCAAAAAGATCAAACAATGTCAAAAGAAGAAGATATG
TTACCTTTTAAGAAGAATTCATCTCCAAATGAAAGTACGTTTCCTTTTCC
ACTTGAGCAATCTTTATTAATTACATCTGCTGCATCTCCTTTAGAAAGCA
AAGCAACTCGGCCAATTAATTCTTTTTCGTCGACCCAACAAGAACAATCC
CATCATAGTGCTGCACCTAAAGGTAGTTAttactaaatttttgaaaagcg
aTAGATAGTATCATGACAATTGTGCAACAGTTNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGATCCAA
CAGGAAAAATCATGTCAAAGTTCTTCACCTAAaggaataaatttttaaaa
agcgaTAGGAACATGACATCAGTAGTGTTATTTAACCCTTTTTAAGGCCG
CTCTACACACAAGAATAATAAGATGAATTCGACTAGAATTTTATGTTTGA
ACTGTTATTCTTGTGCAAACTGCACGcaggaattgaaaaaaaatgtaaat
tagataatacttgaagaattttcTAATATCCCTTTTAATGTTGAATTCTT
CTTCAAACCACCCATAAGAATAAAAACCACGTGTCCTTTTAAATGTTAGA
ACTGAAATCAATCATATACTCCACTACAATGTCTTGTTCTAAGATTGAAG
TTTCATtcttgtgaaaatggtaattatagcaCTATTAAACAAGAAGTTCA
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNAAGAAGTtcatttcatcttcattttttgaagtttttcaaataac
tttttatttaaaattattccactcaacaatatctttccaacggtaccaaA
TTTATTAAGATTCAAACATCTCTCTTTCTACTAGAAAAGACAAAATTGCT
CTTTGATGCAGCCCATCCGGAAGAAGATTCGTCGTTTTCAGATTTGCAAA
CTGTCTCACCTCTTCAAAAGAAACCAGCCTCCATCAATACAAAAAGTACA
ACATCTCACgaatcaacaaaatcaaacaaagagCTTTCGTCTCCTATCCA
AAAAGATCAAACAATGTCAGAAAAAGAAGATATGTTTCCTTTTAAGAAGA
AATCATCTCCAAATGAAATTGCGTTTCCTTTTCCACTTGAGCAATCTTTA
TTAAGTACATCTGCTGCATCTCCTTTAGAAAGCAAAGCAACTCGGCAGAT
TAATTCTTTTTCATCGACCCAACAAGAAGAATCCCATCATAGTGCTGCAC
CTAAAGGTAGCTAttactaaatttttgaaaagcgaTAGATAGTATCATGA
CAATTGTGCAACACTTTTCATTCATTGTGAAATGCCTTAAGGGAAAATAT
GGCGGATTTGGtgcattttctttcttttctctaATGGTTTGTCACTAATT
GACGTTTTACAGAATTTATCATGTTTCCTGTTGTActagaaaaatcattt
tcaattacACATCCTGATTCtccttcagaaaaaaaatcaacttcgcCAAT
CAATTCTTTCCCATCGATCCAACAGGAAAAATCATGTCAAAGTTCTTCAC
CTAAaggaataaatttttaaaaagtgataggAACATGACATCGGTAGTGT
TATTTAACCCTTTTTAAGGCCGCTCTACACACGAGAATAATAAGATGAAT
CCGACTAGAATTTTCTGTTTGAACTGTTATTTTTGTGCAAACTACACGca
ggaattgaaaaaaaaatgtaaattagaTTATACTTGAAGAATTTTCTAAT
ATCCCTTTTAATGTTGAATTCTTCTTCAAACTACCCATAAGAATAAAAAC
CACGTGTCCTTTTAAATGTCCGAACTGAAATCAATCATATACTCCACTAC
AATGTCTTGTTCTAAGATTGAAGTTTCATtcttgtgaaaatggtaattat
agcaCTATTATACAAGAAGTtcatttcatcttcattttttgaagtttttc
aaataactttttatttaaaattattcaactcaacaatatctttccaaaag
taccaaatttattaaaattgaaACATCTCTCTTTCTACTAGAAAAGACAA
AATTGCTCTTTGATGCAGCCCTTCCGGAAGAAGATTCGTCGTTTTCAGAT
TTACAAACTGTCTCACCTCTTCAAAAGAAACCAGCCTCCATCAATACCAA
AAGTACAACATCTCACGAATCAACAAACTCAAACAAAGAGCTTTCGTCTC
CTATCAAAAATGATCAAACAATGTCAGAAGAAGAAGATATGTTACTTTTT
AAGAAGAAATCATATCCAAATGAAAGTACGTTTCTTTTTCCACTTGAGCA
ATCTTTATTAATTACATCTGCTGCATCTCCTTTAGAAAGCAAAGCAACTC
GGCcaattaattctttttcatcGAGCCAACAAGAACAATCCCATCATAGT
GCTGCACCTAAAGGTAGTTAttactaaatttttgaaaagcgaTAGATAGT
ATCATGACAATTGTGCAACAGTTTTCAGTCATTGTGAAATGCCTTAAGGG
AAAATATGGCGGATTTGGtgcattttctttcttttctctaATGGTTTGTT
ACTTATTGACGTTTTACAGATTTTATCATGTTTCCTGTTGTActagaaaa
atcattttcaattacACATCCTGATTCtccttcagaaaaaaaatcaactt
cgcCAATCAATTCTTTCTCGTCGANNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNtttttttgaagtttttcaaataactttt
tatttaaaattattccactcaacaatatctttccaacggtaccaaATTTA
TTAAGATTGAAACATCTCTCTTTCTACTAGAAAAGACAAAATTGCTTTTT
GATGCAGCCCTTTCGGAAGAAGATTCGTCGTTTTCAGATTTGCAAACTGT
CTCACCTCTTCAAAAGAAACCAGCCTCCATCAATACAAAAAGTACAACAT
CTCacaaatcaacaaaatcaaacaaagagCTTTCGTCTCCTATCCAAAAA
GATCAAACAATGTCAGAAGAAGAAGATATGTTACCTTTTAAGAAGAAATc
ggtttcaaatgaaaatagtaCGTTTCCTTTTCCACTTGAGCCATCTTTAT
TAATTACATCTGCTGCATCTCCTTTAGAAAGCAAAGCAACTCGGCGaatt
aattctttttcatcGACCCAACAACAGCAATCCCATCATAGTGCTGCACC
TAAAGGTAGTTAttactaaatttttgaaaagcgaTAGATAGTATCATGAC
AATTGTGCAACACTTATAAGTCATTGTGAAATGCCTGAAGGAAAAATATG
GCGGATTTGGtgcattttgtttcttttcccTAATGGTTTGTCACTAATTG
ACGTTTTACAGAATTTATCATGTTTCCTGTTGTActagaaaaatcatttt
caatatttacaCATCCTGATTCtccttcagaaaaaaaatcaacttcgcCA
ATCAATTCTTTCTCATCGATTCAACAGGAAAAATCATGTCAAAGTTCTTC
TCCTAAaggaataaatttttaaaaagcgaTAGGAACATGACATCGGTAGT
GTTATTTAACCTTTTTTAAGGCCGCTCTACACACGAGAATAATAAGATGA
ATTTGAATAGAATTTTCTGTTTGAACTGTTATTCTTGTGCAAACTGCACG
CAGGAATTGAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCCTTTTAAATGTCCGAAC
TGAAATCAATCATATACTCCACTACAATGTCTTGTTCTAAGATTGAAGTT
TCATTCTTGTGAAAATGGTAATTATAGCACTATTATACAAGAAGTTTAct
tcatcttctttttttgaagtttttcaaataactttttatttaaaattatt
ccactcaacaatatctttccaacggtaccaaATTTATTAAGATTGAAACA
TCTCTCTTTCTACTAGAAAAGACAAAATTGCTTTTTGATGCAGCCCTTTC
GGAAGAAGATTCGTCGTTTTCAGATTTGCAAACTGTCTCACCTCTTCAAA
AGAAACCAGCCTCCATCAATACAAAAAGTACAACATCTCacaaatcaaca
aaatcaaacaaagagCTTTCGTCTCCTATCCAAAAAGATCAAACAATGTC
AGAAGAAGAAGATATGTTACCTTTTAAGAAGAAATcggtttcaaatgaaa
atagtaCGTTTCCTTTTCCACTTGAGCCATCTTTATTAATTACATCTGCT
GCATCTCCTTTAGAAAGCAAAGCAACTCGGCGaattaattctttttcatc
GACCCAACAACAGCAATCCCATCATAGTGCTGCACCTAAAGGTAGTTAtt
actaaatttttgaaaagcgaTAGATAGTATCATGACAATTGTGCAACACT
TATAAGTCATTGTGAAATGCCTGAAGGAAAAATATGGCGGATTTGGtgca
ttttgtttcttttcccTAATGGTTTGTCACTAATTGACGTTTTACAGAAT
TTATTATGTTTCCTGTTGTActagaaaaatcattttcaatatttacaCAT
CCTGATTCtccttcagaaaaaaaaatcaacttcgcCAATCAATTCTTTTT
CATCGATTCAACAGGAATAATCATGTCAAAGTTCTTCTCCTAAaggaata
aatttttaaaaagcgaTAGGAACATGACATCGGTAGTGTTACTTAACCCT
TTTTAAGGCCGCTCTACACACGAGAATAATAAGATGAATTCGACTAGAAT
TTTCTGTTTGAACTGTTATTCTTGTGCAAACTACACAcaggaattgaaaa
aaaatgtaaattagaCAATACTTGGAGAATTTTCTAATATCCCTTTTAAT
GTTGAATTCTTCTTCAAAATACCCATAAGAATAAAAACCACGTGTCCTTT
TAAATGTCCGAACTGAACTCAATCATATACTCCACTACAATGTCTTGTTC
TAAGATTGAAGTTTCATtcttgtgaaaatggtaattatagcaCTATTAAA
CAAGAAGTTCNTTGAAATGCCTTAAGGGAAAATATGGCGGATTTGGtgca
ttttctttcttttctctaATGGTTTGTCACTTATTGACGTTTTACAGAAT
TTATCATGTTTCCTGTTGTActagaaaaatcattttcaattacACATCCT
GATTCtccttcagaaaaaaaatcaNcaaataactttttatttaaaattat
tccactcaacaatatctttccaacggtaccaCATTTATTAAGATTCAAAC
ATCTCTCTTTCTACTAGAAAAGACAAAACTGCTCTTTGATGCAGCCCTTC
CGGAAGAAGATTCGTCGTTTTCAGATTTGCAAACTGTCTCACCTCTTCAA
AAGAAACCAGCCTCCATCAATACAAAAAGTACAACATCTCACAAATCAAC
AAAATCAAACAAAGAGCTTTCGTCTCCTATCCAAAAAGATCAAACAATGT
CAGAAGAAGAAGATATGTTACCTTTTAAGAAGAAATCGGTTTCAAATGAA
AATAGTACGTTTCCTTTTCCACTTGAGCCATCTTTATTAATTACATCTGC
TGCATCTCCTTTAGAAAGCAAAGCAACTCGGCGAATTAATTCTTTTTCAT
CGACCCAACAACAGCAATCCCATCATAGTGCTGCACCTAAAGGTAGTTAT
TACTAAATTTTTGAAAAGCGATAGATAGTATCATGACAATTGTGCAACAC
TTATAAGTCATTGTGAAATGCCTGAAGGAAAAATATGGCGGATTTGGTGC
ATTTTGTTTCTTTTCCCTAATGGTTTGTCACTAATTGACGTTTTACAGAA
TTTATCATGTTTCCTGTTGTACTAGAAAAATCATTTTCAATATTTACACA
TCCTGATTCTCCTTCAGAAAAAAAATCAACTTCGCCAATCAATTCTTTCT
CATCGATTCAACAGGAAAAATCATGTCAAAGTTCTTCTCCTAAAGGAATA
AATTTTTAAAAAGCGATAGGAACATGACATCGGTAGTGTTATTTAACCTT
TTTTAAGGCCGCTCTACACACGAGAATAATAAGATGAATTTGAATAGAAT
TTTCTGTTTGAACTGTTATTTTTGTGCAAACTGCACGcaggaattgaaaa
aaaatgtaaattagataatacttgaagaattttcTAATATCCCTTTTAAT
GTTAAATTCTTCTTCAAACTACCCATAAGAATAAAAACCACGTGTCCTTT
TAAATGTCCGAACTGAAATCAATCATATACTCCACTACAATGTCTTGTTC
TAAGATTGAAGTTTCATtcttgtgaaaatggtaattatagcaCTATTATA
CAAGAAGTTcatttcatcttctttttttgaagtttttcaaataacatttt
atttaaaattattccactcaacaatatctttccaacggtaccaaATTTAT
TAAGATTGAAACATCTCTCTTTCTACTAGAAAAGACAAAATTGCTCTTTG
ATGCAGCCTTTCCGGAAGAAGTTTCGTCGTTTTCAGATTTGCAAACTGTC
TCACCTCTTCAAAAGAAACCAGCCTCCATCAATACAAAAAGTACAACATC
TAACgaatcaacaaaatcaaacaaaaaactttcgtcTCCTATCCAAAAAG
ATCAAACAATGTCAGAAGAAGAAGATATGTTACCTTTTAAGAAGAAATCA
TCTCCAAATGAAAGTACGTTTCCTTTTCCACTTGAGCAATCTTTATTAAT
TACCTCTACTGCATCTCCTTTATTAAGCAAAGCAACTCGGCcaattaatt
ctttttcatcGAGCTAACAAGAACAATCACATTATAGTGCTGCACCTAAA
GGTAGTTAttactaaatttttgaaaagcgaTAGATAGCATCATGACAATT
GTGCAACACTTTTCAGTCATTGTGAAATGTCTTAAGGGAAAATATGGCGG
ATTTGGTGCATTTTGTTTCAggtttgtttcttttgttttcatgatCAATG
TAGATAATGATAAGGATTATCAAGACATGACCAATTTTCTAATACAAATG
GGTTTGGAAGAGGTCGAGAAACATTTACCTAGTGGAAACGGTAacgattt
ctttcatttttgctGGCAATATTTCCTTAATAACATCATATAGATTATTG
ATAATCGTTAATAGTCAGGGTGAATAAGTTTTTAAGAAGATTAttaatga
gaaaagacaatcaTGATAAATCATAAATATTTGTTTAAATATGCTAGTTT
GAATCGTATAAGGAGCTTCTTTGTAATACTCACATTTTAACACATTTAAT
CCGAATTTAATAGAGTCACACTATTCTATGTCAAGTTTTGGATCTTGCAT
GTGAATATTTTATCGAGGTGATTGAAGTAtcagtttttaatttttagata
cATATCATACCAGATCGAAATCTGTTTCTTTGGAGGAACACAAGGTAAAA
AAAGTTTCTGAACTGTCATGATATGCACTAGAATTTGTTTTCCACACTTT
ACATAACACCACAACCATGTACTTTttagaaaagtattgatatactCAAA
GTTTCTAGTTTGGATGGTTCTGATGTTTTTCATGAAACTTTTAATTATAA
ACGCAAATATTGGTTAATATCGCAATATTGGATTAGCATCAAACCtggaa
ttttaaactttttgttaggGTGTGTTTAAATGGCcaggaaatcttttttt
gattcgTTCCTTTTTTAGTTTGCGCTTGCACAACAATTTTGCAGGAGCAA
AAACGATCCTGATTATTTGATGAAATCATGGATCGATGAATATATAGGTA
ACTTTGGAGAAGAGAATTGCAGCCTTAAATTATAGTTATGAAGTAGCTCC
TCCTCAAGATTCAATTGATTGTGGCATTCAAGATTTGTGCATTATATTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013129XLOC_013129Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023351-exon-sc0000452-1491911889:98026..98260TCONS_00023351-exon-sc0000452-1491911889:98026..98260Clytia hemisphaericaexon
TCONS_00023351-exon-sc0000452-1510915933:98026..98260TCONS_00023351-exon-sc0000452-1510915933:98026..98260Clytia hemisphaericaexon
TCONS_00023351-exon-sc0000452-1575043694:98026..98260TCONS_00023351-exon-sc0000452-1575043694:98026..98260Clytia hemisphaericaexon
TCONS_00023351-exon-sc0000452-1491911889:113960..114331TCONS_00023351-exon-sc0000452-1491911889:113960..114331Clytia hemisphaericaexon
TCONS_00023351-exon-sc0000452-1510915933:113960..114331TCONS_00023351-exon-sc0000452-1510915933:113960..114331Clytia hemisphaericaexon
TCONS_00023351-exon-sc0000452-1575043694:113960..114331TCONS_00023351-exon-sc0000452-1575043694:113960..114331Clytia hemisphaericaexon
TCONS_00023351-exon-sc0000452-1491911889:115117..115350TCONS_00023351-exon-sc0000452-1491911889:115117..115350Clytia hemisphaericaexon
TCONS_00023351-exon-sc0000452-1510915933:115117..115350TCONS_00023351-exon-sc0000452-1510915933:115117..115350Clytia hemisphaericaexon
TCONS_00023351-exon-sc0000452-1575043694:115117..115350TCONS_00023351-exon-sc0000452-1575043694:115117..115350Clytia hemisphaericaexon
TCONS_00023351-exon-sc0000452-1491911889:118192..118428TCONS_00023351-exon-sc0000452-1491911889:118192..118428Clytia hemisphaericaexon
TCONS_00023351-exon-sc0000452-1510915933:118192..118428TCONS_00023351-exon-sc0000452-1510915933:118192..118428Clytia hemisphaericaexon
TCONS_00023351-exon-sc0000452-1575043694:118192..118428TCONS_00023351-exon-sc0000452-1575043694:118192..118428Clytia hemisphaericaexon
TCONS_00023351-exon-sc0000452-1491911889:120655..120888TCONS_00023351-exon-sc0000452-1491911889:120655..120888Clytia hemisphaericaexon
TCONS_00023351-exon-sc0000452-1510915933:120655..120888TCONS_00023351-exon-sc0000452-1510915933:120655..120888Clytia hemisphaericaexon
TCONS_00023351-exon-sc0000452-1575043694:120655..120888TCONS_00023351-exon-sc0000452-1575043694:120655..120888Clytia hemisphaericaexon
TCONS_00023351-exon-sc0000452-1491911889:121179..121265TCONS_00023351-exon-sc0000452-1491911889:121179..121265Clytia hemisphaericaexon
TCONS_00023351-exon-sc0000452-1510915933:121179..121265TCONS_00023351-exon-sc0000452-1510915933:121179..121265Clytia hemisphaericaexon
TCONS_00023351-exon-sc0000452-1575043694:121179..121265TCONS_00023351-exon-sc0000452-1575043694:121179..121265Clytia hemisphaericaexon
TCONS_00023351-exon-sc0000452-1491911889:121573..121619TCONS_00023351-exon-sc0000452-1491911889:121573..121619Clytia hemisphaericaexon
TCONS_00023351-exon-sc0000452-1510915933:121573..121619TCONS_00023351-exon-sc0000452-1510915933:121573..121619Clytia hemisphaericaexon
TCONS_00023351-exon-sc0000452-1575043694:121573..121619TCONS_00023351-exon-sc0000452-1575043694:121573..121619Clytia hemisphaericaexon
TCONS_00023351-exon-sc0000452-1491911889:121894..122075TCONS_00023351-exon-sc0000452-1491911889:121894..122075Clytia hemisphaericaexon
TCONS_00023351-exon-sc0000452-1510915933:121894..122075TCONS_00023351-exon-sc0000452-1510915933:121894..122075Clytia hemisphaericaexon
TCONS_00023351-exon-sc0000452-1575043694:121894..122075TCONS_00023351-exon-sc0000452-1575043694:121894..122075Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000452supercontigsc0000452:98026..122075 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.280156	0	0	0	0	0	0	0	0.0201604	1.08473e-09	0.204899	0	0	0	0	0	0	0	0.409713	0	0.315924	0.214813	0	0.288626	0	0	0.973288	0.42228	0.0385035	0.0202504
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00023351 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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