TCONS_00023511 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00023511
Unique Name	TCONS_00023511
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3162

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000455:319170..325459+
coding sequence from alignment at sc0000455:319170..325459+

transcript sequence

>TCONS_00023511 ID=TCONS_00023511|Name=TCONS_00023511|organism=Clytia hemisphaerica|type=transcript|length=3162bp
ATAGAGGtgtgttttttgaaattgtaaaaaGGGATCCTTATGGCTCGAAC
ATACCCAACACCTATTTTGTTTAAGTAACCCCTCCCCCCAACTCAATGCT
TCAAATACAAAAGTTAAAGGCTTTGAAACTTTTCggcgttcttataaaaa
acgtgtataatacAATAGAAATTAAAGCTTATTCCGTCAATGCTTATGca
tcagaaaagagaaaaaaatgtcatttcAACACAAAGATGGTATTAttaat
tatcaaaaaagaacaaatattaCGTTTAGTTTCGCTTTTTAGAGTCTTTA
AATTGTGTGTGATATGTGATGAAGGATAAAAAGTAAATGACTTTCTTTTT
AGAAGTGGAtcgtttggaatttttttcataacattttatcaaaaattttg
aaattatggcTTCTGAAAATACTACTTGGACACAGCTAGGAAGCAGCTAC
CACAGTTATCAGACCAATCAGCCAAATGATAGTCAGAtcagtcaaatatt
ttttcctatAGACTATATCGTAAATACGGGGCAACAATTTGAATCTCCAT
CTCAAGGAATTAATGCTTATCACAATGCAACTTCGAATTCGTTTCTTCAT
GGTCATCAGAATCAAAATGCGACCCAACAAAATTCATATAATTCACAAGA
GAATGTTGGAGCAATCCATGTACAATATAGATTTAATACACCGACAAACC
ATCAGTGTAATCAGACCAGTACAATTGCAGGCCAAAGTAGTGGATTAGAA
TACTTTTCCTCGATCGAGCAGGGTCAACAAAATAATTACAATACTACAAA
TACGCATGCGTCTAGAAACTTCAACACCGTTCAGAACTTACCAAATCGAT
TGACTCGTAGTAAAACGACGTTTAATAATAATGCAAGAATAACGCCAGTT
AATTCAATAACAAAAATCgatagattttttttccacTATGACATGTTTAT
AAAACAAGTAAGAAAACACGAATGTATATGGAATGAAACGAGGGGAGGAT
ACAACAATGAAGAGTCGAGGGAGCAAgcttggaaaaatattttagaacaA
ATGTTGGCGACCCGATTATTGGGTTCTTTCCGTTCGTTGACATGGGATGA
ACAAGTCAATGAACTGAAGCAAGAATGGAAATTCATCATGTATAATTTCA
AAGAATGCAAACTAAATCGTAGACAATCAGATTTGAAGGAACCCCCCAAG
TCTGTAGCAGTGGCAATtatagagaaaatgaaaaacaggaaaacaaaGAC
GATGACATGAGTGATGACTCGGACTCGAAAATttcattaataaaaaaaaa
tatccgaTTCTATCTTCGCTATGAGTATAACCAATTTATCAAGCAAGTAC
AAAAACATGAATGCATTTGGAATGAGAACAATGAAGACTACGTGAACAAA
GAGTCGAGAAAACGGGCTTGGAAAAACGTTTGGAAAGATGTGGCGGGTTG
GTTACAATACCGTACCAAGAATATAATAAAGTGCAATATAAATGACGTTG
TTATGTTTTTGGAGCAAGAATGGAAATTCATCATGTATAATTTCAAAGAA
TGCAAACTAAATCGTAGACAATCAGATTTGAAGGAACCCCCCAAGTGTGA
GTTTTATAAGGCTTTGTCTTTCATGGATTCAATAATAAAAGTTAGaaaca
atgacgtcatgaaaTACCCCGATGTTCCTGATGTTAGAGTATTATTTAAT
ACACAAATCGAGGAGAAGACGCGTATGGTCGGTCTGTCCGTTTACCATGT
TCATATGAATATCTTCAGATGCAAATGTAGTAGTTGGGAATGGTATGCGG
ATTTAGAGGACAAGATATCAGAAAGACGAATGTCTCAACCGTCATTTCGT
GAGAACAATTTCATTAGCACTGACAACAATAACACCAGCATCGATGCTCC
GATAGGTCAAACCGAAAAATCAGCACTACCAGTACACGTACCACAAGATA
ATGAAACTTCCGGATCACCAAACGATGTTAACAAAACTCCTCAACATAAA
ATACCTACACAAGAACATCATACCACAGATTCTGATGTTAAATTCTCTCT
TATTAAGCAAGTTGAAAAACAACCTTGCATTTGGAATCCAAAACATGCTT
ATTACAAGAACAGGAAAAAGACGAAAGAGACATGGGAGGAGATCAGAAAG
ATTGTAAAAACACCTGATAATgTCAGTTTAAAGGACATATGGAAAACCCT
TCGCGAGGATTTTAAAAGATGCCATGAAAGACgaaacaagaaaaaagaag
CCAGTTGCAACTTTtacaaagaattgaaattcttAACAGATGTCATGATT
AAAAATCCGAATCCCGCTGGAGAGTCAACATTGACAGCCAATAAAAATGT
AATTCGTGGTGAGAAAATTCCAAAAGGTTTACAAACGAATTTATCTTCTT
TGCCAAAAGCTATCGATTCTCATCATACATCTTTATATTCCGATGACACC
ACATCGAGCACAGGTGTTGATTTTGACAAAACCTCCCCAAACGATGTGCC
AGTATTCTGTATATCGGATGATAATACTGATATGGAGACGAGAAATGTAC
AAAACGCAGACCAAGAGTCTAAGTCTTTGGTAACGGAACAGACTTCTTCC
TTGCCATTGACAAACAAACACGACAATCAAAGGGGGAACGTTAGTTGTCA
ATCCTACCAAAACACCAAGGAACATATTTCTGCAGGACTTACTTCCAGTA
TTTCCATTGGACATGCTGATAATCCTAACAACCTCCCATCAACATCAACA
CCAGCGATTACTGGATCTTCATCAATATCATCAGAAGATAATGATGAGAT
AACCAATGAGAAATTCAAAAGCGATAATCTGCcacaaaaatattccaaaa
caaataaacaaaagagGAACTCGCATCcaagaagaaaacgaaaacgaaCA
GAGCTTGAATATACAAGAACGAAACGTGCTTCAGCACAAATTTCAAATAC
TGCAGAAACTAAAAATCCACTCGCTTCTGAGTTacacccccgtgtcacag
acccgctgggcacccccacccgctgaaaaaaaagtccaaaatctTGTCCC
CGGGGAGAAAAACGGGCTAAATTTGCCTCCGGggaatccccactgaaaac
ttttaatttttctagatccccactaagtagctcttcaaaatttttatttc
cctgCCGGTCCC

Run BLAST on NCBI

protein sequence of TCONS_00023511-protein

>TCONS_00023511-protein ID=TCONS_00023511-protein|Name=TCONS_00023511-protein|organism=Clytia hemisphaerica|type=polypeptide|length=589bp
MSDDSDSKISLIKKNIRFYLRYEYNQFIKQVQKHECIWNENNEDYVNKES
RKRAWKNVWKDVAGWLQYRTKNIIKCNINDVVMFLEQEWKFIMYNFKECK
LNRRQSDLKEPPKCEFYKALSFMDSIIKVRNNDVMKYPDVPDVRVLFNTQ
IEEKTRMVGLSVYHVHMNIFRCKCSSWEWYADLEDKISERRMSQPSFREN
NFISTDNNNTSIDAPIGQTEKSALPVHVPQDNETSGSPNDVNKTPQHKIP
TQEHHTTDSDVKFSLIKQVEKQPCIWNPKHAYYKNRKKTKETWEEIRKIV
KTPDNVSLKDIWKTLREDFKRCHERRNKKKEASCNFYKELKFLTDVMIKN
PNPAGESTLTANKNVIRGEKIPKGLQTNLSSLPKAIDSHHTSLYSDDTTS
STGVDFDKTSPNDVPVFCISDDNTDMETRNVQNADQESKSLVTEQTSSLP
LTNKHDNQRGNVSCQSYQNTKEHISAGLTSSISIGHADNPNNLPSTSTPA
ITGSSSISSEDNDEITNEKFKSDNLPQKYSKTNKQKRNSHPRRKRKRTEL
EYTRTKRASAQISNTAETKNPLASELHPRVTDPLGTPTR

Run BLAST on NCBI

transcript from alignment at sc0000455:319170..325459+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00023511 ID=TCONS_00023511|Name=TCONS_00023511|organism=Clytia hemisphaerica|type=transcript|length=6290bp|location=Sequence derived from alignment at sc0000455:319170..325459+ (Clytia hemisphaerica)
ATAGAGGtgtgttttttgaaattgtaaaaaGGGATCCTTATGGCTCGAAC
ATACCCAACACCTATTTTGTTTAAGTAACCCCTCCCCCCAACTCAATGCT
TCAAATACAAAAGTTAAAGGCTTTGAAACTTTTCggcgttcttataaaaa
acgtgtataatacAATAGAAATTAAAGCTTATTCCGTCAATGCTTATGca
tcagaaaagagaaaaaaatgtcatttcAACACAAAGATGGTATTAttaat
tatcaaaaaagaacaaatattaCGTTTAGTTTCGCTTTTTAGAGTCTTTA
AATTGTGTGTGATATGTGATGAAGGATAAAAAGTAAATGACTTTCTTTTT
AGAAGTGGAtcgtttggaatttttttcataacattttatcaaaaattttg
aaattatggcTTCTGAAAATACTACTTGGACACAGCTAGGAAGCAGCTAC
CACAGTTATCAGACCAATCAGCCAAATGATAGTCAGAtcagtcaaatatt
ttttcctatAGACTATATCGTAAATACGGGGCAACAATTTGAATCTCCAT
CTCAAGGAATTAATGCTTATCACAATGCAACTTCGAATTCGTTTCTTCAT
GGTCATCAGAATCAAAATGCGACCCAACAAAATTCATATAATTCACAAGA
GAATGTTGGAGCAATCCATGTACAATATAGATTTAATACACCGACAAACC
ATCAGTGTAATCAGACCAGTACAATTGCAGGCCAAAGTAGTGGATTAGAA
TACTTTTCCTCGATCGAGCAGGGTCAACAAAATAATTACAATACTACAAA
TACGCATGCGTCTAGAAACTTCAACACCGTTCAGAACTTACCAAATCGAT
TGACTCGTAGTAAAACGACGTTTAATAATAATGCAAGAATAACGCCAGTT
AATTCAATAACAAAAATCgatagattttttttccacTATGACATGTTTAT
AAAACAAGTAAGAAAACACGAATGTATATGGAATGAAACGAGGGGAGGAT
ACAACAATGAAGAGTCGAGGGAGCAAgcttggaaaaatattttagaacaA
ATGTTGGCGACCCGATTATTGGGTTCTTTCCGTTCGTTGACATGGGATGA
ACAAGGTTAGTATCACAATTTGAACAGACACGCTCTCGCTAccgaattat
ttttttttgtcacaAACTGCCATTCAAACACTCTGACCTTAGTGCCAACT
TAAGTGCCTTTTAAGATTGTGAAGTATTGCTGAGTCATTTTccgtatttt
tcttttgttgtacTTTGACTTACAACTCTACTGTAGTGGATCTAGCAAGC
TCCTGACTATCGCGCCACTTTTTCATTGCAAGtctatgttttgaaaaata
atctaGCATACAAGCATNCATCGTGCCACTATTTCATTGCAAGtctatgt
tttgaaaaataatctaGCATTGGATAtaaaacatgatttttttcataatt
tgaaattttttacattttttggaagtaaaaaagaatactttttctttatt
ttaatctctttttttcaaatatgaaGATCTCTCAGGAATAAGCTTTATGT
TCGGCGGGGAAACTAGTTTAAAGCTCCTGAAATAAGAGCTTTGAACATGA
AATTTTCtctaaattcctaacttttattcagCTTCAAAGTAAAATAACTT
TGGACACCTAAAATCTTTAGCACCTTGAGCATAATGacattgtcaaaaat
tgtctAATTTATCGTTTTAAAGTATATTGTGTGTCAAAACAAGTCCAACT
AGATAGAAAGGGTGCAGTACATGGAAAAGCCCCCACCCCCTACTTCTGAA
CCACCCCTGAATAGGGTTAAATCAATCCACTTAAAAATTATCATTAACTG
CTTTTAATGATATCTTTTTTATATCAAGAACAATGCTAAAAAATAAGATA
CCGACTGTCGATTTATTAGCAGACTAGTGCAACTCCAGCTTAATAACGAG
TTTGAAGATTTACTGTCTGTAAAATCAGTAAAAGCTGTATTAAATTGTTC
ctatagaaaaaaaatccaaaaatgtgatttttattttttctgtacGTATT
TCACATACCTCTGCCTCACTTTCTAGAGGCTTTTTGGAGTGTCCAAAGGG
AATTTTCCTGCTCTACCATAAAAAGAATATAGCGCGGAAGGGATAATGTT
GAGCTCGCCGTAAGTAATCAGAGTGATCTTGAAGACTTTAAATGCCTTTA
AATCTCATTAAAAAGCTTTAGTgtgttttttgacatttttctgaCTTCAT
AGCAGTAAACAGCATTTTCAATCTTATACACCAAATTTCTGGAGAATGAA
AAGGCTGTTTGCCACGAAATCTTTAACTATCGCTGAAAGTATAACCGCTc
atgttttgagtgtttttGGAATAGTCAAGTTAATTCCCCTTCCGCGTAct
tttatgatttatttcattcaattttttcgATTTAATCGGTTTTTATCAAT
AAAGTTTTTACTTTAAAGCTGCATTGATCTACAAGAAAAACTATGTAAGA
GCAGATCACAAAGGGGACCAAGGTCAGTTTAATGGCCGGTATTGTCATAT
TTCAGAGAAAGACTTGACTCTTACCCACACTCTGACAGAAAaaactcttg
atttttttctatgagagcaactttaatttgttttttcttgtatgCTAAAT
TTTCGCTgggagtacttaggcaaatggagggtacgggtATAGGCCAActt
taagggtgcctttttttgacTTAGAAAATCCCTCAAAGGGTCGTAGAAAT
CACAATATCTAAATTCCGTCCCCCTAAGGTttacaaaaaactaaaaactt
ctAAAAAACCAAGATTTATCCCTAAAAAAGCATCCCGATCGGGATTTTAG
CCTCGTGTACTAAAAAACTGTGCTTGTACTAAAGCCTAATCAATGTTTAA
GAAACTtatataatttaattttttttctctatacAGTCAATGAACTGAAG
CAAGAATGGAAATTCATCATGTATAATTTCAAAGAATGCAAACTAAATCG
TAGACAATCAGATTTGAAGGAACCCCCCAAGTGTGAGTTTTATAAGGCTT
TGTCTTTCATGGATTCAATAATAAAAGTTGGAAATGGCGATGTCGTGAAA
TACCCCGATATTCCTGATATTAGGATATTATTCAACATAGGAATGGAGAC
AGGTAAATGGAAAATGGTCAATATATTAATTGTGGATAATTTTATATGTA
GCTGTAGCAGTGGCAATtatagagaaaatgaaaaacaggaaaacaaaGAC
GATGACATGAGTGATGACTCGGACTCGAAAATttcattaataaaaaaaaa
tatccgaTTCTATCTTCGCTATGAGTATAACCAATTTATCAAGCAAGTAC
AAAAACATGAATGCATTTGGAATGAGAACAATGAAGACTACGTGAACAAA
GAGTCGAGAAAACGGGCTTGGAAAAACGTTTGGAAAGATGTGGCGGGTTG
GTTACAATACCGTACCAAGAATATAATAAAGTGCAATATAAATGACGTTG
GTGAGTAAGAATGATTCCTTTCTTTTGGTATTACGGGAACGAGATGTTGT
TCTTTGATTGTCTAAAATAATTACTAAAATGGCTTGAACGTAGAGAAATC
AGTCTAAACGCTGATCTTAAATGCTTGGTTACTAAATAATCAATTACTTA
GATTGCTTAgacgaaaaaagatcttttatcGAAAATGATCACCTCCTTAA
CATATAAAGCATCAGATATAAAATGTCACGGTTATCGCCATTGCGATTGG
AAGTTCATTtcgaaaatttagttttttgatCGATTATGTACTTTCCATTT
CAGTTATGTTTTTGGAGCAAGAATGGAAATTCATCATGTATAATTTCAAA
GAATGCAAACTAAATCGTAGACAATCAGATTTGAAGGAACCCCCCAAGTG
TGAGTTTTATAAGGCTTTGTCTTTCATGGATTCAATAATAAAAGTTAGaa
acaatgacgtcatgaaaTACCCCGATGTTCCTGATGTTAGAGTATTATTT
AATACACAAATCGAGGAGAAGACGCGTATGGTCGGTCTGTCCGTTTACCA
TGTTCATATGAATATCTTCAGATGCAAATGTAGTAGTTGGGAATGGTATG
CGGATTTAGAGGACAAGATATCAGAAAGACGAATGTCTCAACCGTCATTT
CGTGAGAACAATTTCATTAGCACTGACAACAATAACACCAGCATCGATGC
TCCGATAGGTCAAACCGAAAAATCAGCACTACCAGTACACGTACCACAAG
ATAATGAAACTTCCGGATCACCAAACGATGTTAACAAAACTCCTCAACAT
AAAATACCTACACAAGAACATCATACCACAGATTCTGATGTTAAATTCTC
TCTTATTAAGCAAGTTGAAAAACAACCTTGCATTTGGAATCCAAAACATG
CTTATTACAAGAACAGGAAAAAGACGAAAGAGACATGGGAGGAGATCAGA
AAGATTGTAAAAACACCTGATAATggtaacttttttgtttatcttcattt
taggcaagaccaatttgatgagttgttttacgggctcgaccgaccctgaa
attccgaaaatcgtaatagaaataaatttcattttggtaataaattttta
ttttcattgctttacagactgccaaattttcaaaattatgagaattttat
gttgaatttttcattttatccataaaTTCTACCTTTTTGTATCTTttgat
tttctacttttttgtcaagatgtagttgTTTTTGCtgtctttttaggaga
ttttagaGGTTTAATTCTACATTTATTTccattttttcgccgaccgactg
ACCCtctttttttgggtagcttggtccgtaaaacaacaaattaaattagc
CTCGCCTAAAGCCTAAAAGTAATACTTAAAGCTCTTGCTACACAAGCTCT
TTCATATAACAGAACTTGATTCATTTTCACTCCTAAGCTGAAAATGGGTA
AAACCAATGAAGAATCTGGGGGAACTTTATCATACAATCATGAGAGCTAT
CAGAATTTTTAAAGTGAACTAACGGACTGGGTTTAACTTTGTGAATTTTC
CATAATCTGAATCATAATATGTACTCTAGCATACAACATTCATGGGGGGG
ACGCAAATTTGTTATATATATATTACTTATTATACGGAGACTTCGAGTTA
TAGATTGTTTTATAAAGGTCTGAGTTTATGTTCCAGTTGAGATGTTATGA
AACCTCGAAGAAACCTCGTCCCAAAGTCTGTTATCCCTTTTATCAAGAGA
TGATGTTATTAATACTCTATTCTAActgtattttctttcttttacttCAG
TCAGTTTAAAGGACATATGGAAAACCCTTCGCGAGGATTTTAAAAGATGC
CATGAAAGACgaaacaagaaaaaagaagCCAGTTGCAACTTTtacaaaga
attgaaattcttAACAGATGTCATGATTAAAAATCCGAATCCCGCTGGAG
AGTCAACATTGACAGCCAATAAAAATGTAATTCGTGGTGAGAAAATTCCA
AAAGGTTTACAAACGAATTTATCTTCTTTGCCAAAAGCTATCGATTCTCA
TCATACATCTTTATATTCCGATGACACCACATCGAGCACAGGTGTTGATT
TTGACAAAACCTCCCCAAACGATGTGCCAGTATTCTGTATATCGGATGAT
AATACTGATATGGAGACGAGAAATGTACAAAACGCAGACCAAGAGTCTAA
GTCTTTGGTAACGGAACAGACTTCTTCCTTGCCATTGACAAACAAACACG
ACAATCAAAGGGGGAACGTTAGTTGTCAATCCTACCAAAACACCAAGGAA
CATATTTCTGCAGGACTTACTTCCAGTATTTCCATTGGACATGCTGATAA
TCCTAACAACCTCCCATCAACATCAACACCAGCGATTACTGGATCTTCAT
CAATATCATCAGAAGATAATGATGAGATAACCAATGAGAAATTCAAAAGC
GATAATCTGCcacaaaaatattccaaaacaaataaacaaaagagGAACTC
GCATCcaagaagaaaacgaaaacgaaCAGAGCTTGAATATACAAGAACGA
AACGTGCTTCAGCACAAATTTCAAATACTGCAGAAACTAAAAATCCACTC
GCTTCTGAGTTacacccccgtgtcacagacccgctgggcacccccacccg
ctgaaaaaaaagtccaaaatctTGTCCCCGGGGAGAAAAACGGGCTAAAT
TTGCCTCCGGggaatccccactgaaaacttttaatttttctagatcccca
ctaagtagctcttcaaaatttttatttccctgCCGGTCCC

Coding sequence (CDS) from alignment at sc0000455:319170..325459+

>TCONS_00023511 ID=TCONS_00023511|Name=TCONS_00023511|organism=Clytia hemisphaerica|type=CDS|length=5310bp|location=Sequence derived from alignment at sc0000455:319170..325459+ (Clytia hemisphaerica)
ATGAGTGATGACTCGGACTCGAAAATttcattaataaaaaaaaatatccg
aTTCTATCTTCGCTATGAGTATAACCAATTTATCAAGCAAGTACAAAAAC
ATGAATGCATTTGGAATGAGAACAATGAAGACTACGTGAACAAAGAGTCG
AGAAAACGGGCTTGGAAAAACGTTTGGAAAGATGTGGCGGGTTGGTTACA
ATACCGTACCAAGAATATAATAAAGTGCAATATAAATGACGTTGTTATGT
TTTTGGAGCAAGAATGGAAATTCATCATGTATAATTTCAAAGAATGCAAA
CTAAATCGTAGACAATCAGATTTGAAGGAACCCCCCAAGTGTGAGTTTTA
TAAGGCTTTGTCTTTCATGGATTCAATAATAAAAGTTAGaaacaatgacg
tcatgaaaTACCCCGATGTTCCTGATGTTAGAGTATTATTTAATACACAA
ATCGAGGAGAAGACGCGTATGGTCGGTCTGTCCGTTTACCATGTTCATAT
GAATATCTTCAGATGCAAATGTAGTAGTTGGGAATGGTATGCGGATTTAG
AGGACAAGATATCAGAAAGACGAATGTCTCAACCGTCATTTCGTGAGAAC
AATTTCATTAGCACTGACAACAATAACACCAGCATCGATGCTCCGATAGG
TCAAACCGAAAAATCAGCACTACCAGTACACGTACCACAAGATAATGAAA
CTTCCGGATCACCAAACGATGTTAACAAAACTCCTCAACATAAAATACCT
ACACAAGAACATCATACCACAGATTCTGATGTTAAATTCTCTCTTATTAA
GCAAGTTGAAAAACAACCTTGCATTTGGAATCCAAAACATGCTTATTACA
AGAACAGGAAAAAGACGAAAGAGACATGGGAGGAGATCAGAAAGATTGTA
AAAACACCTGATAATgTCAGTTTAAAGGACATATGGAAAACCCTTCGCGA
GGATTTTAAAAGATGCCATGAAAGACgaaacaagaaaaaagaagCCAGTT
GCAACTTTtacaaagaattgaaattcttAACAGATGTCATGATTAAAAAT
CCGAATCCCGCTGGAGAGTCAACATTGACAGCCAATAAAAATGTAATTCG
TGGTGAGAAAATTCCAAAAGGTTTACAAACGAATTTATCTTCTTTGCCAA
AAGCTATCGATTCTCATCATACATCTTTATATTCCGATGACACCACATCG
AGCACAGGTGTTGATTTTGACAAAACCTCCCCAAACGATGTGCCAGTATT
CTGTATATCGGATGATAATACTGATATGGAGACGAGAAATGTACAAAACG
CAGACCAAGAGTCTAAGTCTTTGGTAACGGAACAGACTTCTTCCTTGCCA
TTGACAAACAAACACGACAATCAAAGGGGGAACGTTAGTTGTCAATCCTA
CCAAAACACCAAGGAACATATTTCTGCAGGACTTACTTCCAGTATTTCCA
TTGGACATGCTGATAATCCTAACAACCTCCCATCAACATCAACACCAGCG
ATTACTGGATCTTCATCAATATCATCAGAAGATAATGATGAGATAACCAA
TGAGAAATTCAAAAGCGATAATCTGCcacaaaaatattccaaaacaaata
aacaaaagagGAACTCGCATCcaagaagaaaacgaaaacgaaCAGAGCTT
GAATATACAAGAACGAAACGTGCTTCAGCACAAATTTCAAATACTGCAGA
AACTAAAAATCCACTCGCTTCTGAGTTacacccccgtgtcacagacccgc
tgggcacccccacccgctgaATGAGTGATGACTCGGACTCGAAAATttca
ttaataaaaaaaaatatccgaTTCTATCTTCGCTATGAGTATAACCAATT
TATCAAGCAAGTACAAAAACATGAATGCATTTGGAATGAGAACAATGAAG
ACTACGTGAACAAAGAGTCGAGAAAACGGGCTTGGAAAAACGTTTGGAAA
GATGTGGCGGGTTGGTTACAATACCGTACCAAGAATATAATAAAGTGCAA
TATAAATGACGTTGTTATGTTTTTGGAGCAAGAATGGAAATTCATCATGT
ATAATTTCAAAGAATGCAAACTAAATCGTAGACAATCAGATTTGAAGGAA
CCCCCCAAGTGTGAGTTTTATAAGGCTTTGTCTTTCATGGATTCAATAAT
AAAAGTTAGaaacaatgacgtcatgaaaTACCCCGATGTTCCTGATGTTA
GAGTATTATTTAATACACAAATCGAGGAGAAGACGCGTATGGTCGGTCTG
TCCGTTTACCATGTTCATATGAATATCTTCAGATGCAAATGTAGTAGTTG
GGAATGGTATGCGGATTTAGAGGACAAGATATCAGAAAGACGAATGTCTC
AACCGTCATTTCGTGAGAACAATTTCATTAGCACTGACAACAATAACACC
AGCATCGATGCTCCGATAGGTCAAACCGAAAAATCAGCACTACCAGTACA
CGTACCACAAGATAATGAAACTTCCGGATCACCAAACGATGTTAACAAAA
CTCCTCAACATAAAATACCTACACAAGAACATCATACCACAGATTCTGAT
GTTAAATTCTCTCTTATTAAGCAAGTTGAAAAACAACCTTGCATTTGGAA
TCCAAAACATGCTTATTACAAGAACAGGAAAAAGACGAAAGAGACATGGG
AGGAGATCAGAAAGATTGTAAAAACACCTGATAATgTCAGTTTAAAGGAC
ATATGGAAAACCCTTCGCGAGGATTTTAAAAGATGCCATGAAAGACgaaa
caagaaaaaagaagCCAGTTGCAACTTTtacaaagaattgaaattcttAA
CAGATGTCATGATTAAAAATCCGAATCCCGCTGGAGAGTCAACATTGACA
GCCAATAAAAATGTAATTCGTGGTGAGAAAATTCCAAAAGGTTTACAAAC
GAATTTATCTTCTTTGCCAAAAGCTATCGATTCTCATCATACATCTTTAT
ATTCCGATGACACCACATCGAGCACAGGTGTTGATTTTGACAAAACCTCC
CCAAACGATGTGCCAGTATTCTGTATATCGGATGATAATACTGATATGGA
GACGAGAAATGTACAAAACGCAGACCAAGAGTCTAAGTCTTTGGTAACGG
AACAGACTTCTTCCTTGCCATTGACAAACAAACACGACAATCAAAGGGGG
AACGTTAGTTGTCAATCCTACCAAAACACCAAGGAACATATTTCTGCAGG
ACTTACTTCCAGTATTTCCATTGGACATGCTGATAATCCTAACAACCTCC
CATCAACATCAACACCAGCGATTACTGGATCTTCATCAATATCATCAGAA
GATAATGATGAGATAACCAATGAGAAATTCAAAAGCGATAATCTGCcaca
aaaatattccaaaacaaataaacaaaagagGAACTCGCATCcaagaagaa
aacgaaaacgaaCAGAGCTTGAATATACAAGAACGAAACGTGCTTCAGCA
CAAATTTCAAATACTGCAGAAACTAAAAATCCACTCGCTTCTGAGTTaca
cccccgtgtcacagacccgctgggcacccccacccgctgaATGAGTGATG
ACTCGGACTCGAAAATttcattaataaaaaaaaatatccgaTTCTATCTT
CGCTATGAGTATAACCAATTTATCAAGCAAGTACAAAAACATGAATGCAT
TTGGAATGAGAACAATGAAGACTACGTGAACAAAGAGTCGAGAAAACGGG
CTTGGAAAAACGTTTGGAAAGATGTGGCGGGTTGGTTACAATACCGTACC
AAGAATATAATAAAGTGCAATATAAATGACGTTGTTATGTTTTTGGAGCA
AGAATGGAAATTCATCATGTATAATTTCAAAGAATGCAAACTAAATCGTA
GACAATCAGATTTGAAGGAACCCCCCAAGTGTGAGTTTTATAAGGCTTTG
TCTTTCATGGATTCAATAATAAAAGTTAGaaacaatgacgtcatgaaaTA
CCCCGATGTTCCTGATGTTAGAGTATTATTTAATACACAAATCGAGGAGA
AGACGCGTATGGTCGGTCTGTCCGTTTACCATGTTCATATGAATATCTTC
AGATGCAAATGTAGTAGTTGGGAATGGTATGCGGATTTAGAGGACAAGAT
ATCAGAAAGACGAATGTCTCAACCGTCATTTCGTGAGAACAATTTCATTA
GCACTGACAACAATAACACCAGCATCGATGCTCCGATAGGTCAAACCGAA
AAATCAGCACTACCAGTACACGTACCACAAGATAATGAAACTTCCGGATC
ACCAAACGATGTTAACAAAACTCCTCAACATAAAATACCTACACAAGAAC
ATCATACCACAGATTCTGATGTTAAATTCTCTCTTATTAAGCAAGTTGAA
AAACAACCTTGCATTTGGAATCCAAAACATGCTTATTACAAGAACAGGAA
AAAGACGAAAGAGACATGGGAGGAGATCAGAAAGATTGTAAAAACACCTG
ATAATgTCAGTTTAAAGGACATATGGAAAACCCTTCGCGAGGATTTTAAA
AGATGCCATGAAAGACgaaacaagaaaaaagaagCCAGTTGCAACTTTta
caaagaattgaaattcttAACAGATGTCATGATTAAAAATCCGAATCCCG
CTGGAGAGTCAACATTGACAGCCAATAAAAATGTAATTCGTGGTGAGAAA
ATTCCAAAAGGTTTACAAACGAATTTATCTTCTTTGCCAAAAGCTATCGA
TTCTCATCATACATCTTTATATTCCGATGACACCACATCGAGCACAGGTG
TTGATTTTGACAAAACCTCCCCAAACGATGTGCCAGTATTCTGTATATCG
GATGATAATACTGATATGGAGACGAGAAATGTACAAAACGCAGACCAAGA
GTCTAAGTCTTTGGTAACGGAACAGACTTCTTCCTTGCCATTGACAAACA
AACACGACAATCAAAGGGGGAACGTTAGTTGTCAATCCTACCAAAACACC
AAGGAACATATTTCTGCAGGACTTACTTCCAGTATTTCCATTGGACATGC
TGATAATCCTAACAACCTCCCATCAACATCAACACCAGCGATTACTGGAT
CTTCATCAATATCATCAGAAGATAATGATGAGATAACCAATGAGAAATTC
AAAAGCGATAATCTGCcacaaaaatattccaaaacaaataaacaaaagag
GAACTCGCATCcaagaagaaaacgaaaacgaaCAGAGCTTGAATATACAA
GAACGAAACGTGCTTCAGCACAAATTTCAAATACTGCAGAAACTAAAAAT
CCACTCGCTTCTGAGTTacacccccgtgtcacagacccgctgggcacccc
cacccgctga

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_013212	XLOC_013212	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00023511-protein	TCONS_00023511-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000455	supercontig	sc0000455:319170..325459 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.23292	1.07595	0.835683	0.832198	0.183539	0.275415	2.66346	2.82267	1.38738	2.70345	2.56001	1.51671	5.55355	4.51512	2.68013	3.4996	1.39821	2.74123	6.17637	7.22989	2.33856	2.60211	2.35308	2.91674	5.4968	5.69232	9.32946	6.92165	4.01729	4.06

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR006578	MADF-dom

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00023511 vs. Swiss-Prot (Human)

BLAST of TCONS_00023511 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00023511 (transcript) - C. hemisphaerica