|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023595 ID=TCONS_00023595|Name=TCONS_00023595|organism=Clytia hemisphaerica|type=transcript|length=1546bp
TATattaaaaagaaacttaaaatttacaattattacaaaaaatcaaacaa
gCTTATAATATGATATTTTCACacaatattgaaatcaacgTACAAAACAG
CAATCCCCTTGATTCATTTGATACACAATTAAAACAGATAATTGAACATC
GTTATTAAGGAAACACTTTAAATGTTGTACAAGAATAGTAGAGTGACGCA
AAACATTATTTAGTAATTGACTTGCAGTACAGTGACTCATGccaaagaaa
tgaagaaaaagcaaaataattttcatggcattttcaaattaaaagataAT
CAGATAGTTTCTTTATCTGTGGTCCTCTCCTGAGAAACAAGTCCAACTTT
TTTACCTATTACTACCCCAAATCTCATTCGAGTTATTTGatatcaaaatt
tcttaaaaagggTCTTTGCAACATCTTTTATGTTAAATGTACATTTTCAT
CTGAAATTTGCAGTTTGCAAACACAAAACAGAAATCTTTTTAAATCAGTT
TACCAATTCTGGACAAGAAGATAATCCGATCTGAATTTAACCTATGAACT
TGGAGCAGTGTAGTATCTCATTCATTGTATTTTCAAAACCTGTAGTTCCT
GGACAAATACCCACCAAAGCCTAAGCAAGAATGAAAAAGATAGTTTAAAA
TGTAACCAATAATAAAATTCTACTCCAAAATCTCCTTCCCGACGAAAGTA
ATTTATACAATAACACTTCAATATTGAAGAAAACCCCACTTATATCATGT
GTCTTCTGTGGCCAAGAGGTCCATCGAAAATGCTACCTCCAACTCCTTGG
CGCAACAACAACAATGGAAATTGACTCAgcttcttttagaaaaactcTTT
CAACCTACCTGGGCTTCATATGTCTGCCAACCATGCGAACTAACCATAAT
CCCACAAGATGACTGcgacaaaaagaaaaagtctaccAAAAATAAAGACT
CAATACACACTACCAAACCACTCACAATCATGTGACCCATCAGAAACTCA
AACCCAAAACCACATCCACTTAGCCCTCAAACCAGATCCTCCTGTAAATG
TACAGGTAGAAAGGATCGTCTTGggaatattgaaaaaattaatctttttg
ACGAAGATCCAATAAGAATACTTGAAGATCCTCCTGAtaataatcaaaag
aaaaaataagttcCAAACCCCCCAAAAGACAATCAACCTCAAAGCCCTAC
ACCAGAAGATGATAATTTGATTCTCTCTCACAATATACTTGCTACTCTCA
ACAATATATCTCACCATTCAATAATTGAAATTGCTACTTTATACCAACCC
AATCCTACTACTGAACCAATCCACAGCCATCCCAAACTTTAACTCTTTAA
CTCTCTGAATTTCTTCAGTGATGCTATGTTGGCATGACCTCAATGCTAGC
TTAGAAAACTATAGCTGGGAGATGGCGCTCAGAAAGAAAACCCTGAACAA
CATGTTGGAAAGTTTCTATAAAATCACCTGGCAAATTGTCCCACCAAAAA
GAATAAAGCAAGAAAAGCATGGTCTTTGACCGGTAGCAGGAAAACC Run BLAST on NCBI transcript from alignment at sc0000456:155761..157306 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023595 ID=TCONS_00023595|Name=TCONS_00023595|organism=Clytia hemisphaerica|type=transcript|length=1546bp|location=Sequence derived from alignment at sc0000456:155761..157306 (Clytia hemisphaerica)
GGTTTTCCTGCTACCGGTCAAAGACCATGCTTTTCTTGCTTTATTCTTTT
TGGTGGGACAATTTGCCAGGTGATTTTATAGAAACTTTCCAACATGTTGT
TCAGGGTTTTCTTTCTGAGCGCCATCTCCCAGCTATAGTTTTCTAAGCTA
GCATTGAGGTCATGCCAACATAGCATCACTGAAGAAATTCAGAGAGTTAA
AGAGTTAAAGTTTGGGATGGCTGTGGATTGGTTCAGTAGTAGGATTGGGT
TGGTATAAAGTAGCAATTTCAATTATTGAATGGTGAGATATATTGTTGAG
AGTAGCAAGTATATTGTGAGAGAGAATCAAATTATCATCTTCTGGTGTAG
GGCTTTGAGGTTGATTGTCTTTTGGGGGGTTTGgaacttattttttcttt
tgattattaTCAGGAGGATCTTCAAGTATTCTTATTGGATCTTCGTcaaa
aagattaattttttcaatattccCAAGACGATCCTTTCTACCTGTACATT
TACAGGAGGATCTGGTTTGAGGGCTAAGTGGATGTGGTTTTGGGTTTGAG
TTTCTGATGGGTCACATGATTGTGAGTGGTTTGGTAGTGTGTATTGAGTC
TTTATTTTTggtagactttttctttttgtcgCAGTCATCTTGTGGGATTA
TGGTTAGTTCGCATGGTTGGCAGACATATGAAGCCCAGGTAGGTTGAAAg
agtttttctaaaagaagcTGAGTCAATTTCCATTGTTGTTGTTGCGCCAA
GGAGTTGGAGGTAGCATTTTCGATGGACCTCTTGGCCACAGAAGACACAT
GATATAAGTGGGGTTTTCTTCAATATTGAAGTGTTATTGTATAAATTACT
TTCGTCGGGAAGGAGATTTTGGAGTAGAATTTTATTATTGGTTACATTTT
AAACTATCTTTTTCATTCTTGCTTAGGCTTTGGTGGGTATTTGTCCAGGA
ACTACAGGTTTTGAAAATACAATGAATGAGATACTACACTGCTCCAAGTT
CATAGGTTAAATTCAGATCGGATTATCTTCTTGTCCAGAATTGGTAAACT
GATTTAAAAAGATTTCTGTTTTGTGTTTGCAAACTGCAAATTTCAGATGA
AAATGTACATTTAACATAAAAGATGTTGCAAAGAccctttttaagaaatt
ttgatatCAAATAACTCGAATGAGATTTGGGGTAGTAATAGGTAAAAAAG
TTGGACTTGTTTCTCAGGAGAGGACCACAGATAAAGAAACTATCTGATta
tcttttaatttgaaaatgccatgaaaattattttgctttttcttcatttc
tttggCATGAGTCACTGTACTGCAAGTCAATTACTAAATAATGTTTTGCG
TCACTCTACTATTCTTGTACAACATTTAAAGTGTTTCCTTAATAACGATG
TTCAATTATCTGTTTTAATTGTGTATCAAATGAATCAAGGGGATTGCTGT
TTTGTAcgttgatttcaatattgtGTGAAAATATCATATTATAAGcttgt
ttgattttttgtaataattgtaaattttaagtttctttttaatATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00023595-exon-sc0000456-1491911889:155761..157306 | TCONS_00023595-exon-sc0000456-1491911889:155761..157306 | Clytia hemisphaerica | exon |
| TCONS_00023595-exon-sc0000456-1510915933:155761..157306 | TCONS_00023595-exon-sc0000456-1510915933:155761..157306 | Clytia hemisphaerica | exon |
| TCONS_00023595-exon-sc0000456-1575043694:155761..157306 | TCONS_00023595-exon-sc0000456-1575043694:155761..157306 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000456 | supercontig | sc0000456:155761..157306 . |
Blast
The following BLAST results are available for this feature:
|
