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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023752 ID=TCONS_00023752|Name=TCONS_00023752|organism=Clytia hemisphaerica|type=transcript|length=1051bp
CTCTGCATAAAAAAAATGCAATCTCGATAACCGTGAAAACCTAAATAAAA
GCAATCATGTCGAAACGTCAGAAGAAATAAAGCGCGCGAAGCTACAAAAA
TAGAACTTTTTGGCGCGAAAAGAAGAactgacgtcacttttaaaaaGAAG
ACATGGTATTGCAAGATTGCAGTCGCAAACGGCTGCATAGAAAAAGTACC
AGAAACACGAGGAAAGCAGCATGGTCAAGTCAGAATCTCTATGCTTACCT
TTTTGTGGAAAGAATCTATCGTTGGCTAACCCAAATGAAGAGCCAGGTTA
TGATGCATTTGAGAAGATAGTAGGTGAGACTTTTCTGATGAAATTGAACA
GTTTTATAATCAAGAGAATTGGTACAAAGGTTTATACTCAGCTCGacgaa
aaagaacaaaatatggACGGGAAAGAACTTGAAAGCCACGAGACCTTGGT
GGGTTTGCCGGCTAATGAACAACCTCAACTTTCAACGTTTTCTACGTCTc
cagaaaaacaacaaaatgacaATTTCAGTTATTTACGTGAAGTAATGGAA
GATGGAAATAATTTTACAGACATCGTGCATCATCCTGATTTATTGCCCGA
AAATATAACAAAGAGAGAAATTGAAGCATTATCTAAAAACTTGATGCTTG
AAAGAAATCAAATCGGAAACATTGAAGCTCCGTTTTACGGAAAAggtcaa
attcaaaaacttacAAAGGCTGGGAAGCCGAGAAAGAAATATCAAAGGAG
AAAGAACAAAGACAGTAAACTAGAAGAGATTAAACCAATGGACGAAACGA
GTAGTGATAGATCAGAATCACCAAGAGAAATAAACGAGAATCGAAGCAAA
GAAAGTAGCCCAAGTGAAATACCTATGATGAATAGGGAAGATCTATTTAG
AACTGATGCAATGGCTGTGCCAAGAATCAACTTTTCCTTGACTGAATTCC
TTGATATCAGATCACCAACCAAGATGAAACGTCATTCACCAgataacaac
aacaaacaaatgTCGGTCACGGCACAACTCCCGTCTTTCCCGACACAAAA
G Run BLAST on NCBI transcript from alignment at sc0000461:176697..178022+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023752 ID=TCONS_00023752|Name=TCONS_00023752|organism=Clytia hemisphaerica|type=transcript|length=1326bp|location=Sequence derived from alignment at sc0000461:176697..178022+ (Clytia hemisphaerica)
CTCTGCATAAAAAAAATGCAATCTCGATAACCGTGAAAACCTAAATAAAA
GCAATCATGTCGAAACGTCAGAAGAAATAAAGCGCGCGAAGCTACAAAAA
TAGAACTTTTTGGCGCGAAAAGAAGAactgacgtcacttttaaaaaGAAG
ACATGGTATTGCAAGATTGCAGTCGCAAACGGCTGCATAGAAAAAGTACC
AGAAACACGAGGAAAGCAGCATGGTCAAGTCAGAATCTCTATGCTTACCT
TTTTGTGGAAAGAATCTATCGTTGGCTAACCCAAATGAAGAGCCAGGTTA
TGATGCATTTGAGAAGATAGTAGGTGAGACTTTTCTGATGAAATTGAACA
GTTTTATAATCAAGAGAATTGGTACAAAGGTTTATACTCAGCTCGacgaa
aaagaacaaaatatggACGGGAAAGAACTTGAAAGCCACGAGACCTTGGT
GGGTTTGCCGGCTAATGAACAACCTCAACTTTCAACGTTTTCTACGTCTc
cagaaaaacaacaaaatgacaATTTCAGTTATTTACGTGAAGTAATGGAA
GATGGAAATAATTTTACAGACATCGTGCATCATCCTGATTTATTGCCCGA
AAATATAACAAAGAGAGAAATTGAAGCATTATCTAAAAACTTGATGCTTG
AAAGAAATCAAATCGGAAACATTGAAGCTCCGTTTTACGGAAAAggtcaa
attcaaaaacttacAAAGGCTGGGAAGCCGAGAAAGAAATATCAAAGGAG
AAAGAACAAAGACAGTAAACTAGAAGAGATTAAACCAATGGACGAAACGA
GTAGTGATAGATCAGAATCACCAAGAGAAATAAACGAGAATCGAAGCAAA
GAAAGTAGCCCAAGTGAAATACCTATGATGAATAGGGAAGATCTATTTAG
AACTGATGCAATGGCTGTGCCAAGAATCAACTTTTCCTTGACTGAATTCC
TTGGTAAGTAGTTTCTACATCTCTAAAAGGATACATTTTTAATCAACGAG
TAGTGAAAATGCTCAACACAAGGTCCCCATTCAATAAACGCCACCTTTTT
AAAAAGGTCCCTCGATGATgaccccaaaaaattttttaataccTGGAACG
ATTCAAAGGAATATTCAAAGGAATGATACTAATATGAAACCTCGAATCAA
CTTCGAAAAATAATTAGGATAATGTTAAATAACCAGAATATCCCTTTAAA
TATCGGCTCTGTTCTTTCATTTATTCAGATATCAGATCACCAACCAAGAT
GAAACGTCATTCACCAgataacaacaacaaacaaatgTCGGTCACGGCAC
AACTCCCGTCTTTCCCGACACAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00023752-exon-sc0000461-1491911889:176697..177649 | TCONS_00023752-exon-sc0000461-1491911889:176697..177649 | Clytia hemisphaerica | exon |
| TCONS_00023752-exon-sc0000461-1510915933:176697..177649 | TCONS_00023752-exon-sc0000461-1510915933:176697..177649 | Clytia hemisphaerica | exon |
| TCONS_00023752-exon-sc0000461-1575043694:176697..177649 | TCONS_00023752-exon-sc0000461-1575043694:176697..177649 | Clytia hemisphaerica | exon |
| TCONS_00023752-exon-sc0000461-1491911889:177925..178022 | TCONS_00023752-exon-sc0000461-1491911889:177925..178022 | Clytia hemisphaerica | exon |
| TCONS_00023752-exon-sc0000461-1510915933:177925..178022 | TCONS_00023752-exon-sc0000461-1510915933:177925..178022 | Clytia hemisphaerica | exon |
| TCONS_00023752-exon-sc0000461-1575043694:177925..178022 | TCONS_00023752-exon-sc0000461-1575043694:177925..178022 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000461 | supercontig | sc0000461:176697..178022 + |
Blast
The following BLAST results are available for this feature:
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