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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023773 ID=TCONS_00023773|Name=TCONS_00023773|organism=Clytia hemisphaerica|type=transcript|length=1208bp
ccccgcccaggggaccctgTATGGGGTCAAAATATGGAGTAGCGACCAGG
CGGTATACCAAGCTAAGGAAGGAAAACCTTCAACCCCTTGCCAGTAAGGT
TAAAATGGAACCCATTTTTATGGAGATGtacaaaatagagaaaaatagaC
TGGGGATTGCGGTGCAACATACGGTAGATGCTAAGCAGTCCGAGCCCCCC
GGGTCAGAAGTCCAGGGCAACACTTCTGATTCTGGGGTATCTAAGTTGCC
CAAAAACGAGGAAAATGATATTGAAATTGGGGTTGAAAGCAAACAGGATG
GAAAGGGGAAGAATAGGGGTGGGaggggtcggaaaaatcaaaaatggacG
AGGGAAGAGAGACGTGTCTTGTGGGAATGTTTCATTAGAAGTGGGGGGAC
AGAAGTAAAGGGTTACAGAGACAACATTGTGGAGATGTGGAATGGTAGAG
ATTTGAAAGTTAGAACAAGAGCGAGTGTGTTAGCCCAGGTAAAGGAGATC
CAGAAAGGTGGGAAGTTGAGTGCATTTGATATGAGAGAGATCGAAGAGAG
AGTGTTGCGAGAGAAGAACGGGGAGTATTCTGAGAATGATGTTGATTTCA
CTGTTGTGGGTGAAAACAAGAATGTCTCACCTCATCATGATACTACAAAT
GTTGGAGGCTTACCAGATATTTCGGTTGTTGTTGAACGTCTTGATTGTGT
CAAGAAGGAAGGTGTTGTTAGGATGTTATCCGATGAGGAGAAATTGGTTC
TAGAGAGACTTCGTGTCGTTTTTAACTCAGAAGAACAAGTCCCGATTCCA
ACTCTGAAAGGGAAAGACAATTGGCTCATAATGCGTGAGGTGTCCCTTAT
TAACGGTTTTTTGTCGAACATTTCGCCATTTTGTAAAGATGTGTCATCTT
TGAACAAACTTCTTTATGCTGGTTCATATGTTGTTTGCGAAAGGTTAGGT
TTAATGAAGAAGAAAGGTCCAGCTCCGAGTTTTAGAAAACCATGGTGGCA
GAGAAGGTTGGAAAGAAGTATCGATCAATGGAGACAAGATTTGGGTCGAG
TTTTAGAGATCAGGAAAGGTGTCCAATTGAAAGAAAAAGTCATTAAAGAG
TTAGAAAGGCGATACCAGCTGTCGGAAAGGGGAAGAACAACTGTTGTTAC
ATTTTTAAAGAATAAGATTCAAGCTGCTTCGACTAAAATCAAGAACTTTG
TAAAGAAT Run BLAST on NCBI protein sequence of TCONS_00023773-protein >TCONS_00023773-protein ID=TCONS_00023773-protein|Name=TCONS_00023773-protein|organism=Clytia hemisphaerica|type=polypeptide|length=402bp
PPRGPCMGSKYGVATRRYTKLRKENLQPLASKVKMEPIFMEMYKIEKNRL
GIAVQHTVDAKQSEPPGSEVQGNTSDSGVSKLPKNEENDIEIGVESKQDG
KGKNRGGRGRKNQKWTREERRVLWECFIRSGGTEVKGYRDNIVEMWNGRD
LKVRTRASVLAQVKEIQKGGKLSAFDMREIEERVLREKNGEYSENDVDFT
VVGENKNVSPHHDTTNVGGLPDISVVVERLDCVKKEGVVRMLSDEEKLVL
ERLRVVFNSEEQVPIPTLKGKDNWLIMREVSLINGFLSNISPFCKDVSSL
NKLLYAGSYVVCERLGLMKKKGPAPSFRKPWWQRRLERSIDQWRQDLGRV
LEIRKGVQLKEKVIKELERRYQLSERGRTTVVTFLKNKIQAASTKIKNFV
KN Run BLAST on NCBI transcript from alignment at sc0000461:2719..3926 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023773 ID=TCONS_00023773|Name=TCONS_00023773|organism=Clytia hemisphaerica|type=transcript|length=1208bp|location=Sequence derived from alignment at sc0000461:2719..3926 (Clytia hemisphaerica)
ATTCTTTACAAAGTTCTTGATTTTAGTCGAAGCAGCTTGAATCTTATTCT
TTAAAAATGTAACAACAGTTGTTCTTCCCCTTTCCGACAGCTGGTATCGC
CTTTCTAACTCTTTAATGACTTTTTCTTTCAATTGGACACCTTTCCTGAT
CTCTAAAACTCGACCCAAATCTTGTCTCCATTGATCGATACTTCTTTCCA
ACCTTCTCTGCCACCATGGTTTTCTAAAACTCGGAGCTGGACCTTTCTTC
TTCATTAAACCTAACCTTTCGCAAACAACATATGAACCAGCATAAAGAAG
TTTGTTCAAAGATGACACATCTTTACAAAATGGCGAAATGTTCGACAAAA
AACCGTTAATAAGGGACACCTCACGCATTATGAGCCAATTGTCTTTCCCT
TTCAGAGTTGGAATCGGGACTTGTTCTTCTGAGTTAAAAACGACACGAAG
TCTCTCTAGAACCAATTTCTCCTCATCGGATAACATCCTAACAACACCTT
CCTTCTTGACACAATCAAGACGTTCAACAACAACCGAAATATCTGGTAAG
CCTCCAACATTTGTAGTATCATGATGAGGTGAGACATTCTTGTTTTCACC
CACAACAGTGAAATCAACATCATTCTCAGAATACTCCCCGTTCTTCTCTC
GCAACACTCTCTCTTCGATCTCTCTCATATCAAATGCACTCAACTTCCCA
CCTTTCTGGATCTCCTTTACCTGGGCTAACACACTCGCTCTTGTTCTAAC
TTTCAAATCTCTACCATTCCACATCTCCACAATGTTGTCTCTGTAACCCT
TTACTTCTGTCCCCCCACTTCTAATGAAACATTCCCACAAGACACGTCTC
TCTTCCCTCgtccatttttgatttttccgacccctCCCACCCCTATTCTT
CCCCTTTCCATCCTGTTTGCTTTCAACCCCAATTTCAATATCATTTTCCT
CGTTTTTGGGCAACTTAGATACCCCAGAATCAGAAGTGTTGCCCTGGACT
TCTGACCCGGGGGGCTCGGACTGCTTAGCATCTACCGTATGTTGCACCGC
AATCCCCAGtctatttttctctattttgtaCATCTCCATAAAAATGGGTT
CCATTTTAACCTTACTGGCAAGGGGTTGAAGGTTTTCCTTCCTTAGCTTG
GTATACCGCCTGGTCGCTACTCCATATTTTGACCCCATAcagggtcccct
gggcgggg Coding sequence (CDS) from alignment at sc0000461:2719..3926 >TCONS_00023773 ID=TCONS_00023773|Name=TCONS_00023773|organism=Clytia hemisphaerica|type=CDS|length=1206bp|location=Sequence derived from alignment at sc0000461:2719..3926 (Clytia hemisphaerica)
ATTCTTTACAAAGTTCTTGATTTTAGTCGAAGCAGCTTGAATCTTATTCT
TTAAAAATGTAACAACAGTTGTTCTTCCCCTTTCCGACAGCTGGTATCGC
CTTTCTAACTCTTTAATGACTTTTTCTTTCAATTGGACACCTTTCCTGAT
CTCTAAAACTCGACCCAAATCTTGTCTCCATTGATCGATACTTCTTTCCA
ACCTTCTCTGCCACCATGGTTTTCTAAAACTCGGAGCTGGACCTTTCTTC
TTCATTAAACCTAACCTTTCGCAAACAACATATGAACCAGCATAAAGAAG
TTTGTTCAAAGATGACACATCTTTACAAAATGGCGAAATGTTCGACAAAA
AACCGTTAATAAGGGACACCTCACGCATTATGAGCCAATTGTCTTTCCCT
TTCAGAGTTGGAATCGGGACTTGTTCTTCTGAGTTAAAAACGACACGAAG
TCTCTCTAGAACCAATTTCTCCTCATCGGATAACATCCTAACAACACCTT
CCTTCTTGACACAATCAAGACGTTCAACAACAACCGAAATATCTGGTAAG
CCTCCAACATTTGTAGTATCATGATGAGGTGAGACATTCTTGTTTTCACC
CACAACAGTGAAATCAACATCATTCTCAGAATACTCCCCGTTCTTCTCTC
GCAACACTCTCTCTTCGATCTCTCTCATATCAAATGCACTCAACTTCCCA
CCTTTCTGGATCTCCTTTACCTGGGCTAACACACTCGCTCTTGTTCTAAC
TTTCAAATCTCTACCATTCCACATCTCCACAATGTTGTCTCTGTAACCCT
TTACTTCTGTCCCCCCACTTCTAATGAAACATTCCCACAAGACACGTCTC
TCTTCCCTCgtccatttttgatttttccgacccctCCCACCCCTATTCTT
CCCCTTTCCATCCTGTTTGCTTTCAACCCCAATTTCAATATCATTTTCCT
CGTTTTTGGGCAACTTAGATACCCCAGAATCAGAAGTGTTGCCCTGGACT
TCTGACCCGGGGGGCTCGGACTGCTTAGCATCTACCGTATGTTGCACCGC
AATCCCCAGtctatttttctctattttgtaCATCTCCATAAAAATGGGTT
CCATTTTAACCTTACTGGCAAGGGGTTGAAGGTTTTCCTTCCTTAGCTTG
GTATACCGCCTGGTCGCTACTCCATATTTTGACCCCATAcagggtcccct
gggcgg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00023773-exon-sc0000461-1491911889:2719..3926 | TCONS_00023773-exon-sc0000461-1491911889:2719..3926 | Clytia hemisphaerica | exon |
| TCONS_00023773-exon-sc0000461-1510915933:2719..3926 | TCONS_00023773-exon-sc0000461-1510915933:2719..3926 | Clytia hemisphaerica | exon |
| TCONS_00023773-exon-sc0000461-1575043694:2719..3926 | TCONS_00023773-exon-sc0000461-1575043694:2719..3926 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000461 | supercontig | sc0000461:2719..3926 . |
Blast
The following BLAST results are available for this feature:
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