TCONS_00023799 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023799
Unique NameTCONS_00023799
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2934

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023799 ID=TCONS_00023799|Name=TCONS_00023799|organism=Clytia hemisphaerica|type=transcript|length=2934bp
GGAAAGTGAAATCCGGGAAACACATTTTGGAAGGGAAAGAAAGATGGCGG
ACGAAAATGCTGCATATTGTCCTCAAAATGAACAAGCTTCGTCGCAAGAA
AACTCAGTAGAAACAGCTTCCAAAGATGAAATAGATGCAGGAGATCAATC
TAATGATGGAGAGAATAATGAAACGACATCTACAGAACAGGCCTCaacaa
agaagaaaaggaaacGAAAGAAGAAGAAAGGTGGAGCTGCGGGAGGTGAA
GCTGCTGCTGCTGAAGATGTAGTAGATGGTGAAGAGCAAGCAAATTCAAT
CAATCCTCCAAGATTGAATGCAGAAACTCTACAAAAAGCTTTTGCATCTA
TCATGCTCAATGAATCAGCCCTGGAAAAGGAGAAAGCATCAAAGAAACAC
TTTGAATTTTGGGATACACAACCGGTTCCAAAACttgATGATAAGATCAG
TTTGCATACCAATGAATCCGTGGAAGGTGACAAACAAGACATCCGTCAAG
AACCATTTTCCCTGCCACCTGGCTTTGAATGGGATACATTAGATTTGGGA
GATGAAGATCAGTTAAAAGAGCTGTATACATTGCTGAACGAAAATTATGT
AGAAGATGACGACAATATGTTCCGATTTGACTATTCTCCCACATTTTTAT
CATGGGCACTTCGTCCACCAGGCTTCAAGAACATATGGCATTGTGCTGTT
CGTGTTTCTACAAACAAGAAGCTGGTTGGTTTCATCAGTGGAGTACCAGC
AAAAATTAAAGTATACGAAAAACATGTAAACATGGTCGAAATCAATTTCT
TATGTGTACACAAGAAGTTACGTTCAAAGCGAGTTGCCCCAGTATTAATC
AGGGAAATAACTAGACGTGTCAATTTAGAGGGAATCTTCCAAGCCGTTTA
TACTGCAGGTATTGTGCTGCCAAAACCAGTTGGAACTTGTAGATATTGGC
ACCGCTCAATAAATCCTAAGAAATTAATTGAAGTCAAATTTTcacattta
aaaagaaatatgaCCATGCAAAGAACTATCAAACTTTATCGGTTACCAGA
AAGACTGAAAGATAGAGAATTGCGACCCCTAACTGAAGCTGATGTTCCCA
GTGGTCATAAATTGTTATCAAATtacTTGGCTAAATTTGATTTGGCTCCA
ATGTTTGATGAGGAAGAATTCAAACATTGGTTCTTACCTAAAGATGGCGT
AGTTACTGCGTATATCAAAATGGTATCTTTTCATTTGACAAATTTGCAAT
TTCATTATTGTTTCCCGTAAACCTTTTTCCAAGTCTATATAAAAATCAGA
AGACATcgaaagaaatttatttttatagtaTTAGGGTCTTCTGTCTCAGA
CGAATTTCTCTCCGaaagaagtattcaaaaattcaaaataaaattgaaaa
atctcggCTGATTCTTTGTGTAAATTATGTATTTTGTCTCACATGAAAAA
CTTGACTTTGGCTAAAGataattctttcattttgttttgcagGACGATAG
TGACAATGTGACGGATATGTTCAGTTTTTACCAGCTACCTTCAACCATAG
TCGACCATCCAAAATATAAAACCTTGAAAGCTGCATACTCATTTTACAAT
GTTGCAACGACGATGACATTGAAAGATCTTTTATCTGATGCTCTCATTGT
AGCTAGAAATGATGGTTTTGACGTTTTCAACGCACTGAACCTAATGGAAA
ATGAAGAAGTTCTTGAAGAATTGAAGTTTGGTATCGGTGACGGCAATCTG
AATTATTACATATACAATTGGAAATGCCCAACTATCCCACCACAAAAGGT
TGGACTTGTATTACAGTAGGGGATTGGTTCACAATGTTGTTGGTGAGCTC
TTATGAATTCATTATCTTGGCTTTGGCTTCTCATAGAATGGTGGATGGTG
GATGAGCAGAATGTTTTCAATAGAACCATTATGTCTGCCTGTGACTGAAG
CCCATTCAAAACATTTCGATACAGCTCGTTCAAGTCAAGTGTCAATTGAA
ACTAATTTATAAATTCTAGGTTAAGAGCGAGGGATGAAAACTCCAGAAGA
ATTTGAAAGCCTCCGCcttggttttttttttgaaattcagcaaAGTACAA
AGACCTAGAAATcttttttatgttatttttatgttttttttctacccgaa
atttattcttattaaCAAAGTAGATCTATTTGAAAGATGAATTACTGTAA
ATTTTTCAATGTCAGTatgattcaactttttttagcatttttctttattt
ttattttcgatatgtttttcttctttgacTAGAATTGAGTAGCTAGATTA
TATTAAAAGAAAATGCTAGTAGTAAAAATATAGTTACTTTATTTAAATAT
ACGAATTTAATATTCAGTTTTTCAATGTTTATTATGTCTTAGTCTGAACA
AGTGCAGACCCTACAAAACCGCTAAAGAGCATGAAGCGGATGCCAACAGA
CtactaattcatgatattcatggaGTAATGCTTTacacggaaagaccccg
gtattgccagtagtggcaaactTTATTGTCTAgttaaaatttgccactac
tggctaaaaccggggtatttccgtagaaaagattacgtcatgaatatcat
gaatctcTGAGCTCAAAAACCAGCGAAATTCATATATCCTTTTCAgattt
agttttttatttttcttaaccTTCAACTACATTCCAATATTTTGTAAAGT
CAGTCCACTATCATCTGGATTTGTAATCGTTtgcaatttttaaagaaaaa
ccttttttcgcTTATTGACAGCAATGAAAACAAAGTACTTGTAAATAACC
GTGCCCAAATGATCATAAAAGACGAAACAGAACACCAGAGATCACTCACG
TCCATCTTCCAtttgaaaaatagattttttccttatttatGTGTATTGAT
TTGAGAGGTAGCAAATAAAAACCATTCTAGATGC
Run BLAST on NCBI

transcript from alignment at sc0000462:100182..109976+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023799 ID=TCONS_00023799|Name=TCONS_00023799|organism=Clytia hemisphaerica|type=transcript|length=9795bp|location=Sequence derived from alignment at sc0000462:100182..109976+ (Clytia hemisphaerica)
GGAAAGTGAAATCCGGGAAACACATTTTGGAAGGGAAAGAAAGATGGCGG
ACGAAAATGCTGCATATTGTCCTCAAAATGAACAAGCTTCGTCGCAAGAA
AACTCAGTAGAAACAGCTTCCAAAGATGAAATAGATGCAGGAGATCAATC
TAATGATGGAGAGAATAATGAAACGACATCTACAGAACAGGCCTCaacaa
agaagaaaaggaaacGAAAGAAGAAGAAAGGTGGAGCTGCGGGAGGTGAA
GCTGCTGCTGCTGAAGATGTAGTAGATGGTGAAGAGCAAGCAAATTCAAT
CAATCCTCCAAGATTGAATGCAGAAACTCTACAAAAAGCTTTTGCATCTA
TCATGCTCAATGAATCAGCCCTGGAAAAGGAGAAAGCATCAAAGAAACAC
TTTGAATTTTGGGATACACAACCGGTTCCAAAACttggtaattttttatt
ttttttatttgtgcaGCATTTTTCATGTCTTTCAAGCGTCTGGTAACTGG
ATGCTGCTAAAAACAGCCCGTTTCGGAGAAAAACACTACTATTTTTGGCT
TCTCTTCTGTAGCGCATAGCATAGCGGCACACACTGCCCTGCCttttttt
aacataaaaaaaagtttgatatttttaacTAAAGGTACTAACAATAAACA
TCAGCAATCGCTAGGAAAGGGTAGCTacaaagctctaaaacagcatctaa
taatatgaaaaccagaatatgattcttcaatcagttacatcaatatgcct
tcttgtTACCTGtctttataaatataaataaaagtaatcacggaaaagga
cgcgaaaaaaaagacataagtgtgagaacagagtaatcaaactcattaga
aaaagtaccattaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNat
tattgaaagtttgtctcggcctttttataatgagcgagacatacgttctc
tgattacgcaattttcatattgacattttcgaggcattttgatgtaactg
tcaatgGGAATCAAGCTATATAAACTGCACTTACAGTCAGgaacaagtgc
aaattaggatacGACCCTGCCGATTCTCCGGACAATCCGGGGATTTCTTG
TAAATGTCCGGAGATTTTaacatttattttgaaacttagtGCCCCGGAAA
CCCGGACTTGGTGCGTTGTTTGCGCTACGCACGTAAAGATAAATATGCCT
TACTGGCACTGTGATGTGCCATACTGGCTATGTGGCGTGCCATACTGGCC
GCGCGACGTACTCTAACGGCAGCGCAGCGTGTATACCTGATCGTGCGGTA
CATTTAGATGGTCGCGCCGCATGCCTCTATGGACGCGCGTGGTGGTGCAC
AAGTTACATGTCCGGGGAAATATAGTTTTTTTTCGATCCCCAGACATTTA
CCCCGGATTGTccggggaatcggcagggtTGTATTAGGATACCTGTCTGC
AATCTCTCCTACTTAGGCAGTCAGGGCCATCTTGGTCTTttataacatta
gttcggatagaataaaaacatacctgatcaacacaaccaaaccttcttct
tgcgtttactctttccttcccaacaactttcgtttttgcttatgtaggtt
ttaaaatccacaagtaataaaCCGCTTATAGCTTTATTTGAATAAATATG
GTTGAAATAcaggttttttggtttttagtatcctaattaggatgttgATT
GCTATTTTGGATACTATTTTGTATCCAATTTTTAAGATACTCTCCTAAGT
AGGAGAGATTGCCGaaggtatcctaatttgcacttgttcttgactgactt
acaaacatcaatatttgTCACATCTAACAAAATTTAATAACAGTACTATC
ACAATggacaaataaacaaaggattttctgtcaagagccttgtaaacatt
ccaacaacaaGCAAAAACTTCCatcagcgccgtgcatattttgtcaacat
ccttttcattggataaataccactaaaatatacaagataagtaaacataa
gcaagcgagcacggcttagctaaacgcacctctcttattcattatctaag
aattgaagcgggcaaagattaccgcgggggctgatagcggacaaagctta
tttgaagatattttcagttaatccaaggtagaacaaactaaacatagaaa
gggggtattttttagtgctctatacgatgatcggtatttttttggaattc
tatgtttagattttctaCCCGGCCCGGTTTCTATGTACGCGCGCAaaaat
ttttgagaatcaatcctgagaatgaaaaattttaggaatggatgcttttt
attttaatgctAAAAAAAACTCTAACTTCGATCCTCCTAAATGTAAAGAG
GTTGCAGGATCTGGGTTAGAGAGGCAAAAATCGCAAATAAGCTGTTGAAA
GTCGTAATCCTGGAATATCAAAGGTCCAGCTATACTGTCTGTTGTCCCGC
CCAGACTCCCTGCTCATATTACTCTTGTTGCCATTGCAAAATTACCGCCC
AACagaaatttccttatttgcagcactgaatATTACAAAATTACAATTTA
AGCTTTTCCTTAGATCTGTGCATCACATTCATGATAAATAGTATGAAACA
CTTCCAAGGCAgttacatgtttttattttttgtttcgtcAGATGATAAGA
TCAGTTTGCATACCAATGAATCCGTGGAAGGTGACAAACAAGACATCCGT
CAAGAACCATTTTCCCTGCCACCTGGCTTTGAATGGGATACATTAGATTT
GGGAGATGAAGATCAGGTCAGTATTTCATGAACTGTGATCACTCTTCAGA
CTTTGTACTGGCATTGTAATGGGCTATTCCCTTTAACATATGCATGGtgt
gatttaagaaaaattgcCTTTTACAGCTGTGGTTGGTTaggaattgaaaa
atcttttatttctttgtCATTCATTTATAGTTAAAAGAGCTGTATACATT
GCTGAACGAAAATTATGTAGAAGATGACGACAATATGTTCCGATTTGACT
ATTCTCCCACATTTTTATCATGGTTTGTTATTGATTATTGTTTTTATACA
ATCGAAAAGTTTTACTGTGGACCATCACTTTGTATTAATTTTAGCCATTT
AAAATGACTAAGGGTTATCATAgcaccaaatttcagccaaaaatagcTGT
TTTTAGGGACCTTTTGTGCTTTACCCCCGGTTTTCTTTTGTGCAGACCCC
CcctggtcaattttttttcaaattttctttcttcaaagtTTTAATCTACC
ATTTGGAACatatttggaaagtttcatgTAATATAGAGCATTTTTTACTT
GCAAGCAAAATCCCTTACAATTTCAGTATTTTCAGACAGCTGATAATTCT
CCCAGCCAGGAAAAAGAGCTGGATtacttttaaaaatgaaatgttGTACG
AACATTGTAATCTAATTTATCTTTGAGACTGTTTCTAGATGATGGATGAA
TTTTTTCTTATTCAATCTCAAGGGCACTTCGTCCACCAGGCTTCAAGAAC
ATATGGCATTGTGCTGTTCGTGTTTCTACAAACAAGAAGCTGGTTGGTTT
CATCAGTGGAGTACCAGCAAAAATTAAAGTATACGAAAAGTAAGATTTGC
TGATGTTTCCTATTTTTCCCTATGTCTTGCAAAAGCTATTAAGAAATGAT
CCAAACTCTACTGCGTGTGAAAAACTGGGAAAAAGCTGTCTGGATCTCAC
CATGAAAAGGAAATTACCTTTAACTTTGGTTTTTTTTGACTTCGCATTGT
TTGTTTTTCAGAAAAGAATTATTGCTTGGCTAATTCTGGAGCAAGAAAAT
TGTTTAAATTCTGTCAAAATGTTGCTCCCTTATTTTCTAGACATGTAAAC
ATGGTCGAAATCAATTTCTTATGTGTACACAAGAAGTTACGTTCAAAGCG
AGTTGCCCCAGTATTAATCAGGGAAATAACTAGACGTGTCAATTTAGAGG
GAATCTTCCAAGCCGTTTATACTGCAGGTATTGTGCTGCCAAAACCAGTT
GGAACTTGTAGGTAAGAATATTTCATAGATTTATCCATTCATCCTTCTGT
TGTCTGTAAACAGATCTGATGcctatggaaatttcaaaattctttgcCGT
TCAACGCTACGTTATGCTCTAGATACACTCTTGTGCAGAATACCTTTCAA
TTTTATTAGCATCTATAATAGACAAGTTTTGTGAGAGTCACAATGTTTTG
GTCagttgcaaaaatattttttaagaacaattttttttagtaGGACCAAT
GAATTCAAAAGTTAATTTTCAACAAAGATTTCTTTTCATGTTTCTAGATA
TTGGCACCGCTCAATAAATCCTAAGAAATTAATTGAAGTCAAATTTTcac
atttaaaaagaaatatgaCCATGCAAAGAACTATCAAACTTTATCGGTTA
CCAGAAGTAAGCCAATCTTTCTCTGAAATTggctaccttattggaactaa
tttttgcgggaattaattttagcgtttttcgcagttttttggcaaaattc
gaacctgcgaaatacaattttttccaattttatcgaaaaatttgaaaaat
ccctaggaaaatgaaaaaaatttattccaaaaagggcaaaacctcgaaaa
ttaaaaccagcaaaatgcaattttccaatttttctgatttttccgaccgc
AAATATTAGttcccgtgaaaattagtttcaataagGTAGTACTTTATact
aaaatcttattttgtttcttttatgaGTGTTTGTATAAAGTGTTGAAATT
TGTGTCGGAATTCCGCCCTGTGAAGTATACAAGGCTGCTTATAAACCGTC
TCAAAGTTTATAGCAAGAATTGAAGAATGCAGGCTAACTTACTTTGTAGA
AACCATTATGTGTCTGAAATTAAGAACTATGCTTTAACCACTGCGCAGCA
AATCTTGTTTGTTTATGATAGTGATTTTAATGATAAGGaattgttattat
tttaatattttgattgaCCTTTACTATTCCAGAGACTGAAAGATAGAGAA
TTGCGACCCCTAACTGAAGCTGATGTTCCCAGTGGTCATAAATTGTTATC
AAATGTAAGTAAATAAATCTTGTATTGCTTGTGTGCACTTTTTGGACTTA
TTCCATCATGTTTGCAAtaaaacgaggctgaaattaGGCTGAAAGTAATG
ACAAAAATTATTACCTGTTGCTCGAAATTCAAGCCCATTTTCAGCCCTTA
ATCGGGTTATAATTAAGAACATCCTAGTTTGACAAAGTGTGAACCAAAAA
ATAACCCTTGATCTTTCATTCATTGTAACATAGtatctttgttttttctt
ataactcgttttttttgtttttttttagtacTTGGCTAAATTTGATTTGG
CTCCAATGTTTGATGAGGtttgttaaaaataatttttgtgttTACTTGAC
GACCAAATCAAAATGACTGGAAAATGTTCAGTCAGTATTTACACTTAGGA
TTTCAGCCTTGTTTTCTTTCTTGCTTTTCCTGATAAACCTTTTGATgcgt
caaattttctttttgacatGATTGATTTGTGCTGATTTATGACTtttatg
ctcatcttttttgtCTTGTCTTATTCAGGAAGAATTCAAACATTGGTTCT
TACCTAAAGATGGCGTAGTTACTGCGTATATCAAAATGGTATCTTTTCAT
TTGACAAATTTGCAATTTCATTATTGTTTCCCGTAAACCTTTTTCCAAGT
CTATATAAAAATCAGAAGACATcgaaagaaatttatttttatagtaTTAG
GGTCTTCTGTCTCAGACGAATTTCTCTCCGaaagaagtattcaaaaattc
aaaataaaattgaaaaatctcggCTGATTCTTTGTGTAAATTATGTATTT
TGTCTCACATGAAAAACTTGACTTTGGCTAAAGataattctttcattttg
ttttgcagGACGATAGTGACAATGTGACGGATATGTTCAGTTTTTACCAG
CTACCTTCAACCATAGTCGACCATCCAAAATATAAAACCTTGAAAGCTGC
ATACTCATTTTACAATGTTGCAACGACGATGACATTGAAAGATCTTTTAT
CTGATGCTCTCATTGTAGCTAGAAATGTAAGATTTTTCGTTCAGAATTAG
CTGTGTTACCAATCTTAACACACACTTATAATACAGCAGGTGTCGAAGCC
TTTTTGTCACCAGTAAACGATAAAAAGTTTTCCAACCCCGTCATCACATC
TTGATAGTTGAATTTTTTAAAGGCAAAGGAACTCAACTTAATCTATGGAG
TGCGATGatacttttttaaaagattgtacTGGCCTTTATTTTTCCTTCAT
AGATTTGCTTGGTGTTTTTAAAAGCTaatgaaattttcttcttcattttt
ttctttcattgtttTCCAGGATGGTTTTGACGTTTTCAACGCACTGAACC
TAATGGAAAATGAAGAAGTTCTTGAAGAATTGAAGTTTGGTATCGGTGAC
GGCAATCTGAATTATTACATATACAATTGGAAATGCCCAACTATCCCACC
ACAAAAGGTATGAAATAGTTCCTTTGACATACTTACGTCTGGTTTGAACA
CTCCTCCATCCAAGTAACATTTTGACTGTATACCTTATTATTGAGAATAT
TCAATCACCAAGAAAGCTGTTGTCAATTTTTATTCGCAAGAATGAATCCT
TTTCCAAATGAAGACAAGGAAGTGGCGCGGGGGAGTGGGTGCTGTTTTTT
TTAAGTATCTACATAAGTTTTTATAAATCATTCCCTTTGAGTGTATACCT
TTAGAAGTGTTTCACTAATCAAAAGTTGATCTTTAGTAATTTCTGTATTT
CACTTATAGGTTGGACTTGTATTACAGTAGGGGATTGGTTCACAATGTTG
TTGGTGAGCTCTTATGAATTCATTATCTTGGCTTTGGCTTCTCATAGAAT
GGTGGATGGTGGATGAGCAGAATGTTTTCAATAGAACCATTATGTCTGCC
TGTGACTGAAGCCCATTCAAAACATTTCGATACAGCTCGTTCAAGTCAAG
TGTCAATTGAAACTAATTTATAAATTCTAGGTTAAGAGCGAGGGATGAAA
ACTCCAGAAGAATTTGAAAGCCTCCGCcttggttttttttttgaaattca
gcaaAGTACAAAGACCTAGAAATcttttttatgttatttttatgtttttt
ttctacccgaaatttattcttattaaCAAAGTAGATCTATTTGAAAGATG
AATTACTGTAAATTTTTCAATGTCAGTatgattcaactttttttagcatt
tttctttatttttattttcgatatgtttttcttctttgacTAGAATTGAG
TAGCTAGATTATATTAAAAGAAAATGCTAGTAGTAAAAATATAGTTACTT
TATTTAAATATACGAATTTAATATTCAGTTTTTCAATGTTTATTATGTCT
TAGTCTGAACAAGTGCAGACCCTACAAAACCGCTAAAGAGCATGAAGCGG
ATGCCAACAGACtactaattcatgatattcatggaGTAATGCTTTacacg
gaaagaccccggtattgccagtagtggcaaactTTATTGTCTAgttaaaa
tttgccactactggctaaaaccggggtatttccgtagaaaagattacgtc
atgaatatcatgaatctcTGAGCTCAAAAACCAGCGAAATTCATATATCC
TTTTCAgatttagttttttatttttcttaaccTTCAACTACATTCCAATA
TTTTGTAAAGTCAGTCCACTATCATCTGGATTTGTAATCGTTtgcaattt
ttaaagaaaaaccttttttcgcTTATTGACAGCAATGAAAACAAAGTACT
TGTAAATAACCGTGCCCAAATGATCATAAAAGACGAAACAGAACACCAGA
GATCACTCACGTCCATCTTCCAtttgaaaaatagattttttccttattta
tGTGTATTGATTTGAGAGGTAGCAAATAAAAACCATTCTAGATGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013371XLOC_013371Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023799-exon-sc0000462-1491911889:100182..100618TCONS_00023799-exon-sc0000462-1491911889:100182..100618Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1510915933:100182..100618TCONS_00023799-exon-sc0000462-1510915933:100182..100618Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1575043694:100182..100618TCONS_00023799-exon-sc0000462-1575043694:100182..100618Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1491911889:104673..104797TCONS_00023799-exon-sc0000462-1491911889:104673..104797Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1510915933:104673..104797TCONS_00023799-exon-sc0000462-1510915933:104673..104797Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1575043694:104673..104797TCONS_00023799-exon-sc0000462-1575043694:104673..104797Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1491911889:104962..105053TCONS_00023799-exon-sc0000462-1491911889:104962..105053Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1510915933:104962..105053TCONS_00023799-exon-sc0000462-1510915933:104962..105053Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1575043694:104962..105053TCONS_00023799-exon-sc0000462-1575043694:104962..105053Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1491911889:105504..105620TCONS_00023799-exon-sc0000462-1491911889:105504..105620Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1510915933:105504..105620TCONS_00023799-exon-sc0000462-1510915933:105504..105620Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1575043694:105504..105620TCONS_00023799-exon-sc0000462-1575043694:105504..105620Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1491911889:105872..106042TCONS_00023799-exon-sc0000462-1491911889:105872..106042Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1510915933:105872..106042TCONS_00023799-exon-sc0000462-1510915933:105872..106042Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1575043694:105872..106042TCONS_00023799-exon-sc0000462-1575043694:105872..106042Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1491911889:106329..106437TCONS_00023799-exon-sc0000462-1491911889:106329..106437Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1510915933:106329..106437TCONS_00023799-exon-sc0000462-1510915933:106329..106437Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1575043694:106329..106437TCONS_00023799-exon-sc0000462-1575043694:106329..106437Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1491911889:107014..107085TCONS_00023799-exon-sc0000462-1491911889:107014..107085Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1510915933:107014..107085TCONS_00023799-exon-sc0000462-1510915933:107014..107085Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1575043694:107014..107085TCONS_00023799-exon-sc0000462-1575043694:107014..107085Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1491911889:107360..107398TCONS_00023799-exon-sc0000462-1491911889:107360..107398Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1510915933:107360..107398TCONS_00023799-exon-sc0000462-1510915933:107360..107398Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1575043694:107360..107398TCONS_00023799-exon-sc0000462-1575043694:107360..107398Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1491911889:107610..108107TCONS_00023799-exon-sc0000462-1491911889:107610..108107Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1510915933:107610..108107TCONS_00023799-exon-sc0000462-1510915933:107610..108107Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1575043694:107610..108107TCONS_00023799-exon-sc0000462-1575043694:107610..108107Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1491911889:108401..108538TCONS_00023799-exon-sc0000462-1491911889:108401..108538Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1510915933:108401..108538TCONS_00023799-exon-sc0000462-1510915933:108401..108538Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1575043694:108401..108538TCONS_00023799-exon-sc0000462-1575043694:108401..108538Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1491911889:108841..109976TCONS_00023799-exon-sc0000462-1491911889:108841..109976Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1510915933:108841..109976TCONS_00023799-exon-sc0000462-1510915933:108841..109976Clytia hemisphaericaexon
TCONS_00023799-exon-sc0000462-1575043694:108841..109976TCONS_00023799-exon-sc0000462-1575043694:108841..109976Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000462supercontigsc0000462:100182..109976 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	1.10852	0.305027	0.356008	0.154136	0.121919	0.154694	0	0.194135	0.0926612	0	0	0.103878	0	0.12971	0	0	0	0	0.19843	0	0	0.335002	0	0	0	0
Blast
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BLAST of TCONS_00023799 vs. Swiss-Prot (Human)
Match: NMT2 (Glycylpeptide N-tetradecanoyltransferase 2 OS=Homo sapiens GN=NMT2 PE=1 SV=1)

HSP 1 Score: 416.772 bits (1070), Expect = 3.474e-134
Identity = 194/295 (65.76%), Postives = 234/295 (79.32%), Query Frame = 2 
Query:  401 FEFWDTQPVPKLDDKISLHTNESVEGDKQDIRQEPFSLPPGFEWDTLDLGDEDQLKELYTLLNENYVEDDDNMFRFDYSPTFLSWALRPPGFKNIWHCAVRVSTNKKLVGFISGVPAKIKVYEKHVNMVEINFLCVHKKLRSKRVAPVLIREITRRVNLEGIFQAVYTAGIVLPKPVGTCRYWHRSINPKKLIEVKFSHLKRNMTMQRTIKLYRLPERLKDRELRPLTEADVPSGHKLLSNYLAKFDLAPMFDEEEFKHWFLPKDGVVTAY-IKMVSFHLTNLQFHYCFP*TFFQ 1282
            ++FWDTQPVPKLD+ I+ H   ++E DK ++RQEP+SLP GF WDTLDL D + LKELYTLLNENYVEDDDNMFRFDYSP FL WALRPPG+   WHC VRVS+NKKLVGFIS +PA I++Y+    MVEINFLCVHKKLRSKRVAPVLIREITRRVNLEGIFQAVYTAG+VLPKP+ TCRYWHRS+NP+KL+EVKFSHL RNMT+QRT+KLYRLP+  K   LRP+   D+ S  +L++ YL +F LAP+ DEEE  HWFLP++ ++  + ++  +  LT+    Y  P T   
Sbjct:  119 YQFWDTQPVPKLDEVITSHG--AIEPDKDNVRQEPYSLPQGFMWDTLDLSDAEVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLLQWHCGVRVSSNKKLVGFISAIPANIRIYDSVKKMVEINFLCVHKKLRSKRVAPVLIREITRRVNLEGIFQAVYTAGVVLPKPIATCRYWHRSLNPRKLVEVKFSHLSRNMTLQRTMKLYRLPDVTKTSGLRPMEPKDIKSVRELINTYLKQFHLAPVMDEEEVAHWFLPREHIIDTFVVESPNGKLTDFLSFYTLPSTVMH 411

HSP 2 Score: 133.265 bits (334), Expect = 1.610e-32
Identity = 71/112 (63.39%), Postives = 90/112 (80.36%), Query Frame = 2 
Query: 1481 FVLQDDSDNVTDMFSFYQLPSTIVDHPKYKTLKAAYSFYNVATTMTLKDLLSDALIVARNDGFDVFXXXXXXXXXXXXXXXKFGIGDGNLNYYIYNWKCPTIPPQKVGLVLQ 1816
            FV++  +  +TD  SFY LPST++ HP +K+LKAAYSFYN+ T   L DL+SDALI+A++ GFDVFNAL+LMEN+  LE+LKFGIGDGNL YY+YNW+CP    +KVGLVLQ
Sbjct:  387 FVVESPNGKLTDFLSFYTLPSTVMHHPAHKSLKAAYSFYNIHTETPLLDLMSDALILAKSKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWRCPGTDSEKVGLVLQ 498
The following BLAST results are available for this feature:
BLAST of TCONS_00023799 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NMT23.474e-13465.76Glycylpeptide N-tetradecanoyltransferase 2 OS=Homo... [more]
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