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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023803 ID=TCONS_00023803|Name=TCONS_00023803|organism=Clytia hemisphaerica|type=transcript|length=3356bp
aaattgaTTGTTAAATTTAATGAATAGTGATTACCGACGCTAATTGAATG
CGAAAAAATACAAGCTCTTATCTTTGGTGTGTGGTGATGATCTTATGTGG
GTTTTTACAAACAGAAGGTATTTTCAAGATGACGTCGATGGGAATGAGTT
CCTTGTTCTCTTTTACTTCTCCTGCTGTCAAACGACTGCTTGGTTGGAAA
CAAggagatgaagaagaaaaatgggCAGAAAAAGCTATAGATTCACTTGT
CAAGAAGTTGAAGAAACGAAAAGGTGCCTTGGAAGAATTAGAGAAAGCTT
TGTCCAATCCAACTGGAGAATCTAATTGTGTCACAATTCCAAGAAGTTTG
GATGGTCGTTTACAAGTTTCTCATCGTAAAGGTCTTCCTCATGTTATATA
TTGTCGTGTATGGAGATGGCCAGACTTACAAAGCCACCACGAATTAAAAC
CATTAGAATGTTGCGTTTATGCCTTTAGTTTGAACAAAAAAGAAGTTTGT
ATCAATCCATACCATTACCGTCGTGTTGAAACACCAGttCTTCCACCAGT
ATTGGTTCCACGTCAAAGTGAATACCCACGAGGACCACTTCCATATCATA
TGCAACATGCTAATCACCAAGGAATGCCAAACAATGCAAACTTTCCTTCA
TTTTCACATTCCAGATCACCTGGTGCTCCTGGTGaagAAGGACCACCTGG
TTATAATGGAGTCATGTCTGAGGATGGTGGTAGTCCACGGCCAGATCTCT
CAATGGATGCTGATAACATCCCACCAGATGTTACACCAATCACCTATAAC
GAACCAACAAACTGGTGCTCCATTGCATATTATGAATTGAATATCCGTGT
TGGAGAACCATTCCAAGCTTCTGGAACCAGTCTTGTAATTGATGGGTTTA
CTGATCCTAATACAAGCTCTGATCGATTTTGCCTTGGTGGTATGTCAAAT
GTTAACCGTAATTCAACAATCGAAAATACACGCCGGCATATCAGTAAAGG
AGTTCATTTGTATTACGTTGGTGGGGAAGTTTTTGCTGAATGTCTCAGTG
ATAGTGCTATATTTGTTCAAAGTCGAAATTGTAATTACCATCATGGATTC
CATCCCACAACAGTTTGTAAAATCCCACCTCAATgtactttgaaaatttt
caataatcaaGAATTTGCTCAACTCTTATCGCAAAGTGTTAACCATGGCT
ATGAAGCTGTTTACGAACTTACTAAGCATTGTACTATTAGAATGAGTTTT
GTTAAAGGATGGGGTGCAGAATATCACCGTCAAGATGTAACAAGTACACC
GTGCTGGGTTGAAATTCATCTCCATGGTCCTTTACAATGGCTTGATAAAG
TATTAACACAAATGGGTTCTCCTGCAGGAATCATTGGGTCGGTATCATAA
AATCAAATCAGGACTAAAATCATGTTGTCATAAAACTGTTTTGTTACTAC
CATGTTTTAGTTGGTTTGTTTGATAGATATGGGTGGATCAGTCAGAGAAA
TACAGGTTCAACATCCAAAATCGagaggaaaaatgaaattgctaTTTTTA
CTACATACTAATAAATCAGAACATGACGTAACGTTAGAAACTATGGAACT
GCTAATAAAATTAATAACACACAATTCTAAAGAATCCAGAGTAGTTATAT
ATACAGCAGAATCTATATTTTATAGCAGAAATTATAATTTTCCTAAACAA
GCTTCTTGTGTTCACAGTTTTCGAATATATGAAGGTCAACGAAATTTATT
ACAATGTACCGTATGAAGAAGTTGTTAACATTGATCAATCTAAAGTATGT
TACAACAAaggagattttttttaaaatactaatatttattatttttgtct
CTCGTTAGTAACCtgtgtaaaatatattatttttgcGAATGTTTGGTCCA
ATGCAAGGTAATCTTGTAAGGATTCTAGAGAGATGAAATCGTTTTTCCCT
TAATTTTTCTAAGCAGTAAAAATAAACCAATTCTCTTTTTGCACGATTAC
AATTATGTGTTTGGGCCTTTTACCTTTTTAATAATAATCCTCTATATTCT
AATATCTAATAttatacttttgttttcataatgttTTATATATACCTTGC
AATATTCTTTTAGCTACCCATTTTGTAATTATGTTTCAGTTGACAGTGCC
AGAAACATTTATACAAAAATGAACGCTAATGGAAGTGTTTTAAAGGGTAT
GCTACTTTTTTCAGTCAAGCTAGTACAGTTTCTAATGTCATTTTTGTCTT
GTTTACGTGTTATGCTTCTCATGTTTTGTCTCGATTATTCAGTCATGAAA
GTAAGCTCTTTAGCTTGAACAAGTTTTCCCATATTTCAGCGTCCAACGTT
CTGtttatttagcaaaaaaattactttttttaaattgtaaatttcatttg
tagattttttttgacatagacagtattttttttgtttacgcTGCTAGCTT
CTTATATGATTTATACGCGCTTTGCGATTTTTGACATCCGTTCGACTTAG
TACTTTTTAGTTTTCGATTCAACTTTTTGACTGAATCAGgtaattgattg
tttttttcaataattcttGATGCCCATCTTTGTACGGAAAGACCCGTCAA
AAACTGATTACCTACAAGCTTTTGGAATATAACcggtgtttttcatttgt
atcCATACAAAAGATAAGGgcttgaatttcaaaatatagtACCTTCTCAA
CCCGGAAAACTAATTAGGGCAAGTTTTGTCAATGATCTGTTCGTagcatt
tatttttcaaagctaCACATGAATGAGCTCGATTCTACCATGGATAGCAA
TGCTTTCTCCTAACGCCATGTCATGGGGGGAGAATACTTTCAGTACCCAA
TGCACAggctgcaaaattaaagtctgaagacaaaatcacgcttttactcg
aaatttttgtatgctttttacatgacatttatttctgattcattcgaatt
tattgacactaataaagttatcagctgtaagttgtaaagcaagtaatatg
ggaataaaatcacgtgaactttttcgagtaatcacatgttttggcTGCAT
TGATAtgattttgcaacccgtgtatttaACTTTTCCTTATGCTCTTCATA
AGTTTAACTTTTGTCATTCTAATTTTTGCTGCTAACTTTTGTTGCTTTAA
GATACGTCGTTGAATCGTACAATATGTTTATGCTTCAACTTCATTATCAT
TATTACTACTACTAGTTTttagaaagaaatattttggtttttataGATAT
ACAAGAAACGTGATACAAAAATCACacatagtttattcttattttgttgT
TGTCAACTTGAcccctttttctatttttgcctCGATTTCGAAATCACAAG
ATTTAC Run BLAST on NCBI transcript from alignment at sc0000462:152948..169935+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023803 ID=TCONS_00023803|Name=TCONS_00023803|organism=Clytia hemisphaerica|type=transcript|length=16988bp|location=Sequence derived from alignment at sc0000462:152948..169935+ (Clytia hemisphaerica)
aaattgaTTGTTAAATTTAATGAATAGTGATTACCGACGCTAATTGAATG
CGAAAAAATACAAGCTCTTATCTTTGGTGTGTGGTGATGATCTTATGTGG
GTTTGTAAGTGCTCCTTTTTTCTTAAAGTTTGTATTGTATAGAGCTTCGc
tactcagggggggggggtactagggttggcggatgaggggtatgtgtgga
cgggacctccgaaaaccgaccctaaGATAGACTGATTTTAGCTGAAAAgt
taacccttagagagacttctttgaaaaatgttcttccatttttaaaaaaa
gtcctacccttagagagacttttttacaatcagaacaaattctaaaaatt
gtgaattttccgacccttatagagactactttgaaattttctgatttttc
caacccttagagagactttaaaaggtgaaaaaccgacccttaccgtccgc
acatataCCCAGCACCAATTTTTGCTTAAGTACCCCCGGTTCGCTAATTC
AAACTTgttttattcgaatctttctttttattcgaatctcttTTTGATTT
ACACGTTATTCTTTGtgagaacaaactatttaagaacaaGGCTTCagtgg
ccaaaatattaagaacaagttaagaacattttaaagctttgcaggctgca
aaaaagttacaaaaatggacaaaaatactaagCTTAAAAACTCAAAGATT
TTAGATGTTCTAGAATGTTTTGTAGAGCAAATTACATTTTTAGTCCGAAT
CAGCGAGAGTCAACTGGGTTGTTTTCACTATTTTCTTTACATTGAGGGGG
TTCCACTTTTTCATTCTAGaaacaattaatttttttactgtACTTGTGAT
CATGTTGCATAGAAAATACCGAAACGTCAAgaatgaataaaattaaattt
ttagttttcacttttaGTACGAATAAATTTATCTGGCCCAGCaagaaatc
tttttcaaattgtgGATCATTCTGCCGTGATTTGGTTGAAGAACACAATG
CCTTTAAATTCGAATATAAATTACCACAAATGGGAGATCAAATCAACTGA
CCTGAAGTTacaatttttgcagatttgtCCCAATAAGGATTGTAAAACTc
acaaaaattttctctttttcctcctttttagtTAAGGGTCTGAgagtcga
aagtcgggcggcacaccCCCGGTCGaatcgcaaccctagtacccccccgg
gttttgaatataaaatttcttgaaatgtaaatttcatgaaaacctctttt
ggaaatttcttagTGAAAGCTTTTACCACCGTTGTACACCAAAGTCCATG
AAATGAAATCAGATAACATGAAAATGATATAGAGACGCCCATTTGATAGC
GATGGCTCCATCTTTATGGTCGAAAGTTTTATCATTGCTTTTCTTTATTA
TGTCTTTATTATTGGGTGGAAGTTTAACCTATGTTCTTTACGTAAACTAA
TGGTTATCGattttgaccccccccccttctcaCAGGCCCACTACGACCCC
CCTCCCACtgggaaaattggccaaaatatcatccctagtggaaaattata
ctctagtttttatccccgctgaaataatcaaataagaaaatcctcgctgc
aaaatattgtgctattttttctatCCCCGCCGATTTTCTGACCTGAAAAC
AATGTAATTCTAACCCCCAGTTATAAAATgcatggaaatatcaatccgcA
TCGAGATTCAGCCCGTTATTTTTACTGAAGAAAAAATccatcgggtctgt
gagaaaggggtgtgttTTGTGAGGCCTGAGTTGAAATCTTTCTTCAAACA
TCATTATGattctttgtttttgtgtgagTGTTAGCTTTATTTTTCgcgca
tttttttttttgtcatttctctgatatcatgaattgcaataaaaatggac
aaaaatacacgCCTGACTGCATTATTTCAGCTCTATTTTAACTCTAATTC
AGTCCGTCCTTTAAGAAGGTGTGTGTTCTGTAGTCCAGAACCAACTTTGC
AGTCAAGAAACTatacatcaaaattttaagtaaCAAAGCAACTACTTGGA
GTTAAAAATTAAGATTTAGAACAAGaaccaaatatgaaaaatagattttc
gtTGCCCCGCCCATTTGTTAccttgaaaagaaaaaacttggaatctggcg
gactgttttacgtTCCACCtaagtaaaaaaatattattgatattGATCCG
GGCCACTTACTCGTgacatccagtctatcaaaaggCCTTAAGTGGACCAA
GGATGTGTGCTCCGCGAATCTTTGTCAATCAATCGAAAGGGCGAGCACGC
ATTACCCCATGTGTTTAATGCCCCAAAGATTAAATTTAGGTAGTCAtgtg
tttggaaaaaaatctccGAGTTTATCTTCAGACGCTTGAAGTCTTCCAAA
TATGACTTTGCCATGACCATTTATCATGACCATTACTTTCTAAAGTACCT
TCCAAATATGGCCTCTTCGGGACTGGGATATTCCAGTTTTCTTTACACAA
CAGTAAAATCCTATATCTGGCTCTAGTCCAATAGAACCAGGCACGATGCA
CTGGGTACGGCCGCCGTacaagattttcacaaaaaatcccgaaattttcc
tcttcgtcggtaaaatcgcttaaatttcctcatttgCCGTACCATATTTA
GACAGCTTCCGCCATGACTGAGAACTCATTGTGTGTGCTTTTAAGCCCCG
AAGCAGTTGTAAATTTACTGGAATGGTGAATTTAGGGGGCAAACATAGAC
CCTGTTAAAGCATTGTACCTTATGTTATCAATTTTTAACCAGATATTCAA
AATGGTAAATGTGTCTAAAATCATGGCATGGTGTCTTATCAATATAATCG
cgtggtttaaaaaaaaagcggAAGTTTTTTCCTTTTAAGTTGAAAACGTA
TCTTgatacaaaatggtaaaaaacaCACCTTGTAACCATATCCATCATTA
TGAAAGGAAAATATCCCTTAAATTGTTTCAATAAACCCATCAGATGGGCC
TAGATCTTtaacattgttaaaagctttCTGTTCTTTATtccattaaaaaa
aatggctgaaatcaAACTTTTAAATCAGCCATATCatatcacaatttttt
tttttaattagcattttatgaaaaatatgtAAATGGCGTCTGTTTTGTCT
GATATATCACCTATATACATGTAAAACTTTTAGGTACATTTTTCCTCCAT
GAAAATCAATAAGACGTctcttctgattggttcttttacaaaaaaactcA
TGTGAATTACTGGATTTAGAATTTATCTTCTTCTTTTAATTCATGGCAGG
CAGAATTTTACTACTGAATCTTtggaaaatctttaaaatcatATTCTTAA
AGTGCTTTGATCTGTCTACTGATAGAAATATGGTCTTTATAAGGGGTAGG
TAATGTGTATCATACCCTAAGTAACCTTTTTATTGGTAGTACCCTACCGT
TTATAGGCACTACACTAGAGGAACTCAGAACATTGAAGAGAGGAAGAGAT
ATGAATGATATTCATGACAGtgtacaagaaaaaaacaaaattgaattaCG
ATAGTACTTTAGTAAGTAAGTTATCGTCAGCTAAAgatgaaacttaaagt
actaTCGtaattcaattttgttttttcttgtacacTGTATATGAAGTTCT
GGTCCTGATCATCGAGCACTTTTTGATGGAATCATTGTTCAGTTATttat
attcatgatgtaatatTTTCTACGGAAGCACTCAAAAAATCCCGGACGTT
TgccactagttttattgtttaaatttaaaattagtgCCAAATGTCCGGTC
TTTTTTGGTGCTTCCgcataaaacattacgtcatgaatatcatgattTCA
AGATATTGCCGAAATGTTCTTTCTTTCTTGTACATGTTTTGATATGGGTA
TTATTTATCGTCACTCCTTTTTTCACAATGATCCGAATTTTAGTGTATTT
ggctttcttataaaaattcaaaaattaaagaatGTGATCCGAAATTTTCC
CCGGGAAGAGGGGCTGCTGTTCACCCTTTTTACGATCATTCCTTCATGGA
GATGACCCTTTTGTAAACAATTTGTTTCCCATTTCAAGATAATATCTGCC
TGTTGTTTAAGTGGTATATAGTCAAAGAACCCAGTGTTATCCAGGGCTCA
AAAGCGCGAAGACCTAGGTGGACTGGCTTTTTTCTATGTGGGGgtggttt
ttttaagaaatggcAGATCAGACTCCCACTCTGCTTAACGGGATGGAATG
Ctcaatttgcccaaatataggaaaagtggattaaatttcgtgtgaattaa
ttttcgcgatgtTCGcgaattttggtcattttcgcgaaaattagtgtTCC
CAAAATGTTTAAGATccgaattttggccaaaaactctaggaaaatgaaag
aaattggaTGAAAAGAGgctgatttgcaaaattttgtccacgcgaaaatt
ttagattctcaattcgcgaaaataagtccacgcaaaaattaattgaatta
taAGGTGAAATCTTTAAGAAATTCTATCAATtcgatcttttgaaaatttc
ttcccgcaaTTCGTtgagtctgaatcgcagacctctatagatatgcTTCC
TATAAGaggctttttcgctagaggatgtgCAGAAGCCTAGAAATTAGTTa
gagaaaggttaaagaatGTTTGAATTGAATGTGAAATCTTTGTGGGAATT
GTATTATATGAAATTTAATTTACGTAAAAAGTCTGAAAGTGgcaactgaa
aatatttaaatttcaaatttgtacaaaatgtcaataccagatttccaaaa
ataatatttctacTATGAATGGTAATGCGTCTTACTGTAAAGTATGATAT
TAGGGTTAAAAAATGATGGTGGAATGTTATGGGGCtatatcaaaatatat
caaagaGGGTGCGTGCATCCTATTGTTCTCTGAGAATAACAGCCCAATAT
AGCTTTTTCCACAGAGAATCAAACTTCAGATTTTTTCTTGCCAGAAGAAT
TTTGTTACTTATTTTACCGGGCTGTGATAAGGAGGAAAGTCTAAAATGCA
GTTATGAATACCATAATAATAGAACCcatgaaaacatttttatgaatttt
aggAAAAAGGAGCAAACCTTTAGACATCAAATTGTCAAGTATCATCATTG
TCAAGTTTCATCTCTGACACAAGAAATAAAGCACGAATTTCACACCGTCC
TGCAATGTTTTacttttaagaaagaaatttcatCTTGAACAAAAAACGCA
TTATGCAGAGCGAAATATGTAATACACgcatttcctattagcagattcat
gtaaaaaaatcacgaaaaaacgtcgagtaaagctctATATTGCACACATa
agtatatttttttcaaaatgtccagagtatgagGTAAGGTCTCAGCCAAT
CAGAcatttactcgacgttttttcgtgacttttttatatGAATCTACTAA
TAGGAAATTTGTGTAATTCAAAGGTTGTTTAAAGAAACCTGATACGCCCC
GCCGTACCTTTCGTACTCACTGGCGTTTACAgtgatgaatatttttttca
agtcaagcTCTCATTTATAGGATTCTAAGTATGTAACTCGTAGTATAGTG
TAACTTAGTATTACAATGGACTACAGTACAGAAAAAGACGtgtgttttgt
ttaaaaaatacatgtccaatctttcccaaattttaaccaaagatgcatct
aactGAAATCTAATTCGACATGTACTTATAGAATTAGAGCTAttttacga
tttatgacgtcataatttgatgacgtcaaaattcacacttttattgataa
ttaatttttaggttaatatttaattactttaaaaaatctagacacgccct
aactcacccgagaAATTTTATCATCTTAATTAAATGTATGTAATTCAAGT
TTAACTCTCTGAGTGGgtgtgttccttataaaaaatatattcgtGTATTC
TTATAGAATTTTGTTCCTAAAAAAGTGCCTGCATCTCTAGGCTTCTgatc
atcctctagcgaaaaaagtttcttatatatAGAGGaaaagtatatctata
gaggtctgcgattcagactactgCATCTCCGACCGTTGACTCTCTAACTC
TCCACTAAGCCGAACGTATTTTTCTTCAGGGGGGTTGCTCGATTTAGAGA
GGGAAGGAAATGTTCATGAATAATGAAGGACtccttttatgacgtcatca
tactgttagaaaaaataaaaagtttacaTAACAAAGGGAGAAACAGTGCA
AGTTAGAGATAGAACGGTATAAAACGTACAAGATCGATTTGTcatgtcat
tttttattttgtaatgtaAAACTGTGAGAATtgtattttcagaaaaaatc
accCCTGATATTTTGTACAGGGATTTTGTCCTCAAAACAATTTGTCTTTG
TGCAATTAGCCAATCATGATAAGTTATCTTCGATTAATTGAAATTTATGT
AGACACCCCGGTTCTGTCTGATTAAAATGTCCCGGCGTCAGCCTGTTTTC
AGCAATCCGGCAACCATGATAATATCACGTGGTGCAAAATTATCCAATCA
CTTTACGTTAGAATGTTTATATCTTATCTCTGATTGGCTCTGTATTATCA
CGTGATAAAAAATAAGCTTCTTGAATCGAAAACATGATGTTCTTGTACGA
GACTTAGCACTCTCAGACCTTGTTTTCTCAAAGGATTTCGAACCAAATTA
TTGGTGGTGTCGCCAGTTACTGTCTTCTTGTCTGGGGATTTATCTTACAT
TCTTTGATTGCTAAAGATATTTTATCTCTACTTCAATATGCCAGTTACTT
CACTATATCTATGTACCTTTTTATCAGCCttttatatttacataaattca
taaggttttgtttgattttggcTTGGCTTTTTTAAAATGGTTTTTATTGG
TGATTTTGAACGTTTGTGAGTTCGAGTAATACATATATATGACAAATAAT
AACAAGCAGCTATTGAAAGAATTtcctttgaatttgttttagattaattt
gttattttattacaaaatttagTTACAAACAGAAGGTATTTTCAAGATGA
CGTCGATGGGAATGAGTTCCTTGTTCTCTTTTACTTCTCCTGCTGTCAAA
CGACTGCTTGGTTGGAAACAAggagatgaagaagaaaaatgggCAGAAAA
AGCTATAGATTCACTTGTCAAGAAGTTGAAGAAACGAAAAGGTGCCTTGG
AAGAATTAGAGAAAGCTTTGTCCAATCCAACTGGAGAATCTAATTGTGTC
ACAATTCCAAGAAGTTTGGATGGTCGTTTACAAGTTTCTCATCGTAAAGG
TCTTCCTCATGTTATATATTGTCGTGTATGGAGATGGCCAGACTTACAAA
GCCACCACGAATTAAAACCATTAGAATGTTGCGTTTATGCCTTTAGTTTG
AACAAAAAAGAAGTTTGTATCAATCCATACCATTACCGTCGTGTTGAAAC
ACCAGGTAATTTATATCCTCCAAACTTGTCTGGCAAAAACCATGCATTAC
TTGGGGCCTGATCCTGCTCTAGAGTCACAGAAGTAGGGGCAAATCTGAAG
GGTTTTTTGGTCTGGAAAAGCAAATTTTGTAAGTTGGTCAATTTTAATAT
CTTTCTAGTGAGCTTTTACTAAGGTTTTTTCAAAGAAGTTTGAAAACTAC
TGTACCTTTAGGTAATAATCCAAAACTTCCCTTGACAATCAGAAGCGCCG
AGGTCACAAAAATTCAGATAGTGCTGTGGTACAGTCATTTGAAAATAAGA
TAAAGCCAAGCTGGCATAATCTGTGAGTATCTTCCACACTGTTTTCTAGG
CGGCCAACTTAATGCATTCTTCAGAATATTCTGTAATTTGTATTTTCTAa
agaaatgttttcatttgattGTTCAGGGAAATTTTGGGTGTTATAGGTAA
GTACAACGGTAATACAGTTAGGTGTATTTGCTGAttgataaaataataaa
tttatttcCACTTCTCTGGATAACCTGATAGTAGATCAATTTCAACTTAA
TTTTTATCTTAACTGTAGTAAACAAAACATCCACAAGCAGTGCTTAAAAT
AAAAGTACTCATACAATCATTTGATATGATTGAAGTCCCAGAATGCTAAA
TAGCATAATAAATTGTGCATGTATTTATTAGCTTAGTAGGCAAATACATT
GTATAGGGATATCAATAAAGATGATTAGGAAAAGGTCCATTTCAATACAG
ACACTGATACCACTTGGACGTATATAGGACACTTTTCAAAGCTTCGTTAG
TTGAACATGCACGCCTTTGGGTTAATCCTGAGTTTTTTACCAAGATAATA
AAATAACACAAATCATCTTCTACAGGGTGCGTCATAAAAAAGGTTTCTCT
CTTTAATGTGAATTTTTTGCTGatcttaaaaatttgaaagataaggcaaa
aataaaaaattgtagtGTTCCTGGAAACTGGCCGGgtgaaaaaatggaaa
ttttctGACCCgtccgcagactatgggtttatctttatggttcatcataa
agaaaatcaagttgaccgttcaagctatcaaacgttgTTTGtttagatat
tcccgcttgtaaatcaagttttgttcgttacTAGTTGATGCATTAGTATT
CAgagcttacttcatactgtttgtatatacataaaagttatctttgaagt
cctatttcaatgatcttaagttattaaatatatttttaaaagaaattttc
cagccGGCCACATGAGATGACAGCTTTTTTCTTTCACCCgtattccggaa
acactacatttgtTTTGTTCTcctaaacttaaaattttgatgggctattt
attaaatttggttcattagatcaaaatttatgctcaattaaacaaaaaag
ttactttcaaaaacgttaaaatcgACCTATATATCAAATTAATCAGAAGC
ATAATTGCATTGTACATTATTATTCTTTTTCTATggaaaggaaggttgaa
tttcaataaagaaaattcatcagaaaatgccataaaattttgtaaattca
tAAAACTAAATCAGTGtatatccagtctagaaccaaaaaacTACGGACAT
TTTTGATAAagataaattaaaatgatttttatgaagattttaaaccctta
cgAGCCTTCAGATTCAAAGTTTATGTTTTTCATTACTAAAAAATGCTCTT
ATTCATGTATATAAAGGCTATTGcaattgccaattttaaaataaaaattt
gtaaccctccaaacgatttggagtacattaaaaacgagaccggtcttggt
gcggtCGTGCTCGTGCTGCTTTCCGACTGGTTAATTGTGCatgtaaaagt
taaaaaaagcgGCCAGAAGACCGTGCACAGTTCCGTATGGTCCGTCCGTg
cggacgatggtgcggtccccgCCGACTAAAGCGGACAATGGTGCAGTCCC
CGCCGACTAAAgcggacgatggtgcggtccccgccgtttgtttatatttc
tttcgGTTGCCgtaagaatttcagcctcgagttcaacCAAGCAAAACAAC
AACTTGTTTCTGGACACACAAAAAGAACTTGCGTTGTTTGATGTTCGATG
CTCACATGTGAATTCTTGAGTTcaactttgtttattttgccgAACGTTAT
AAAATCGGCAAACAGTCATGTAAAAAACCATTCCGCAAAATGTATGCTGT
TTGTTATGATTTCTCGCCTGCCGGCAAACGTTTCGAACGGCAAAATGTCC
GCACCATGACCGCACTGAATACCGCACTTATTCAAATGGTGCTCTTTAGT
GACCGATCGAGTGCGTTTGAATGGATTTTTAGAAAcgatttttggatgat
ttctgGCCGATACAATGGTATCATTTTACCGCACGGTAAATCGTTTCGCC
GCTTTTTTGCCGCACATTTTATCGATCCGtccgcaccaagaccggtctca
tttttaatgtactccaaatcgcttggggggtcACATTTGATAGGTTGGTT
TTCAACGTTTTcaagcactttctgaaagtaacttttttattcaattgagc
ataacttttgatctaaatgaatcaaatttaataaatgaccgatcaaaatt
tttaagtttatctttcttctgtccaatgaaatagaaatagttttttaatt
tttttctatttcgaccaaaaagtaattttaaagagagaaacttttttgtg
acaCACCTAGTAGATTATTTTCTATACAGAAAAAACATATATAAACTTTG
AGCAAATTTGAATGGGAGGGCAGAAATGGTTTCACTGATATAACacagat
ttttaattttgaaactcTTTAGACTATATCCAACACTTGGTGTAAATGCT
GAAATCAATCAGCATATACAGCAAATATTCATAAGCTGATTAGATTAGGA
GCTCTAGATTTTTCTATCCATCTCTATCCAAGTACCCTCAGGTACATCTT
GTTTAAtatgatctttattttgattcaTTGGATTTAGAAgttcaaaattt
ggtcaaaactcTTGAAAAATGAATGTAATTAGATTGGTgcactaaaaaat
attttttaccaaaattggtttatttggaaaagtttttcttttatattcga
CAAAAATTTAAGTTTGACAATATCTGACGATTTAGGTTTTTAATGGTTTT
CATAACCCTCACTAAGATTTTCTTAAGGTCCAAGAAAGCAAACCCCTCTG
ATTTATATAATTATGTCTTGAATATTAGGTCAAGTGTAATTAGCATGTGT
TCGTTATATAGCAATTCACAGCCAATACAGAAGAACATGAtgtattaaaa
tcttttttgtttcagttCTTCCACCAGTATTGGTTCCACGTCAAAGTGAA
TACCCACGAGGACCACTTCCATATCATATGCAACATGCTAATCACCAAGG
AATGCCAAACAATGCAAACTTTCCTTCATTTTCACATTCCAGATCACCTG
GTGCTCCTGGTGGTAAGACTGGATTCCTTTTGTTTCAGAAAAACTGTGTc
tttttttagccttttttttaattattttggcAAGGCCATAAACTTGGGGA
CTACTAAAAAGTGGATTTTGGTGAACTTTGGTATACAAATCTTTAAGCTT
GATGAATACAGTATCTGTTTAAGAAACATATTCTCAATGCTCCTGAGCAA
TTTCATAGNGAATACAGTATCTGTTTAAGAAACATATTCTCAATGCTCCT
GAGCAATTTTATAATatgattcttttttctttctttttttcagaagAAGG
ACCACCTGGTTATAATGGAGTCATGTCTGAGGATGGTGGTAGTCCACGGC
CAGATCTCTCAATGGATGCTGATAACATCCCACCAGgtacaatttttgaa
tttttttacaatgttttgaaaatgcaTAATATGCCCATATAATACTTATT
CATAGAGAAATCAAAGTTTGagattttgtttgattgtttgaagcAAAAAC
AGCTTGATTTCATAGCTTGAAAACATacatatttttcaattaaatGTATG
TAAATTAAACAATCAAAAATACATTATTTAACAACTGCTGAATATCAAAG
TTTAATGTTTGAATATCAGTATTAATACCTCATCAGatcatttcatttca
ttcatcATTTGAAGGCCAAATTCTACATCATGTTTATAGCTTTTCTTGCA
GCTCTAGCCTTTGCAgactttttgtctttttcaaagCTTCACATCTGCAA
GATCTTCTATTCCAATCGTTAAAACAATTGATTCCAAACAGtctaaaaaa
tgttgaaaatttactTTGACTGACTTTGGGAAGAAACTTTGCAGAAAGAT
ACTTTTGCAAAAGttaattcaatgaaaaattatgaaaagcaACACGATAA
AAAACACGACTAGTTTACTGTAAAACTACCCTCGAAAAATTTGCTTGGAT
ACGCTTTAGATTTAAAGCTGTGAAATAGTAAGCCTGTTAGGACTGAGTTT
CATAATGCTGATCTTTCTCTTTTAATGGGTTATGAGCATCAGGCAGATTT
TGAAGTCTTTGTTATGAACAGGCCAGGCATTGAACTGACAAACTTGTGCA
ATGTATGCACAGTGTCTATCATaaataacgcttataagcattataagcat
atgaaggctcaggtTTGCAGAAATCctaagcatatatgtcagcctgaaat
atttttcaagttgtaattttttatctgtttaaaaaggtttggtagggGTC
AAGTAAAACATTCCCCACAcggctacattccactgctcccaaaatctgaa
caaacttttacaaaatttctgaaatttcactaaaaacttggctcggggtg
aatcataagcatataattAATAAGCATAAGCTATGTCTAGATGCTTTGGG
AACTttagcatacacgagcctgaccaaggggcagacCCTTGCTACAAAAC
ATgcatcaattatatatgtgatAAGTATAAGTTTTAACACCGATTTTCTA
TACAGATGTTACACCAATCACCTATAACGAACCAACAAACTGGTGCTCCA
TTGCATATTATGAATTGAATATCCGTGTTGGAGAACCATTCCAAGCTTCT
GGAACCAGTCTTGTAATTGATGGGTTTACTGATCCTAATACAAGCTCTGA
TCGATTTTGCCTTGGTGGTATGTCAAATGTTAACCGTAATTCAACAATCG
AAAATACACGTCGGCATATTAGTAAAGGAGTTCATTTGTATTACGTTGGT
GGGGAAGTTTTTGCCGAATGTCTCAGTGATAGTGCTATATTTGTTCAAAG
TCGAAATTGTAATTACCATCATGGATTCCATCCCACAACAGTTTGTAAAA
TCCCACCTCAATgtactttgaaaattttcaataatcaaGAATTTGCTCAA
CTCTTGTCGCAAAGTGTTAACCATGGCTATGAAGCTGTTTACGAACTTAC
TAAGCATTGTACTATTAGAATGAGTTTTGTTAAAGGATGGGGTGCAGAAT
ATCACCGTCAAGATGTAACAAGTACACCGTGCTGGGTTGAAATTCATCTC
CATGGTCCTTTACAATGGCTTGATAAAGTATTAACACAAATGGGTTCTCC
TGCAGGAATCATTGGGTCGGTATCATAAAATCAAATCAGGACTAAAATCA
TGTTGTCATAAAACTGTTTTGTTACTACCATGTTTTAGTTGGTTTGTTTG
ATAGATATGGGTGGATCAGTCAGAGAAATACAGGTTCAACATCCAAAATC
GagaggaaaaatgaaattgctaTTTTTACTACATACTAATAAATCAGAAC
ATGACGTAACGTTAGAAACTATGGAACTGCTAATAAAATTAATAACACAC
AATTCTAAAGAATCCAGAGTAGTTATATATACAGCAGAATCTATATTTTA
TAGCAGAAATTATAATTTTCCTAAACAAGCTTCTTGTGTTCACAGTTTTC
GAATATATGAAGGTCAACGAAATTTATTACAATGTACCGTATGAAGAAGT
TGTTAACATTGATCAATCTAAAGTATGTTACAACAAaggagatttttttt
aaaatactaatatttattatttttgtctCTCGTTAGTAACCtgtgtaaaa
tatattatttttgcGAATGTTTGGTCCAATGCAAGGTAATCTTGTAAGGA
TTCTAGAGAGATGAAATCGTTTTTCCCTTAATTTTTCTAAGCAGTAAAAA
TAAACCAATTCTCTTTTTGCACGATTACAATTATGTGTTTGGGCCTTTTA
CCTTCTTAATAATAATCCTCTATATTCTAATATCTAATAttatacttttg
ttttcataatgttTTATATATACCTTGCAATATTCTTTTAGCTACCCATT
TTGTAATTATGTTTCAGTTGACAGTGCCAGAAACATTTATACAANNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTT
TCTATACAGATGTTACACCAATCACCTATAACGAACCAACAAACTGGTGC
TCCATTGCATATTATGAATTGAATATCCGTGTTGGAGAACCATTCCAAGC
TTCTGGAACCAGTCTTGTAATTGATGGGTTTACTGATCCTAATACAAGCT
CTGATCGATTTTGCCTTGGTGGTATGTCAAATGTTAACCGTAATTCAACA
ATCGAAAATACACGCCGGCATATCAGTAAAGGAGTTCATTTGTATTACGT
TGGTGGGGAAGTTTTTGCTGAATGTCTCAGTGATAGTGCTATATTTGTTC
AAAGTCGAAATTGTAATTACCATCATGGATTCCATCCCACAACAGTTTGT
AAAATCCCACCTCAATgtactttgaaaattttcaataatcaaGAATTTGC
TCAACTCTTATCGCAAAGTGTTAACCATGGCTATGAAGCTGTTTACGAAC
TTACTAAGCATTGTACTATTAGAATGAGTTTTGTTAAAGGATGGGGTGCA
GAATATCACCGTCAAGATGTAACAAGTACACCGTGCTGGGTTGAAATTCA
TCTCCATGGTCCTTTACAATGGCTTGATAAAGTATTAACACAAATGGGTT
CTCCTGCAGGAATCATTGGGTCGGTATCATAAAATCAAATCAGGACTAAA
ATCATGTTGTCATAAAACTGTTTTGTTACTACCATGTTTTAGTTGGTTTG
TTTGATAGATATGGGTGGATCAGTCAGAGAAATACAGGTTCAACATCCAA
AATCGagaggaaaaatgaaattgctaTTTTTACTACATACTAATAAATCA
GAACATGACGTAACGTTAGAAACTATGGAACTGCTAATAAAATTAATAAC
ACACAATTCTAAAGAATCCAGAGTAGTTATATATACAGCAGAATCTATAT
TTTATAGCAGAAATTATAATTTTCCTAAACAAGCTTCTTGTGTTCACAGT
TTTCGAATATATGAAGGTCAACGAAATTTATTACAATGTACCGTATGAAG
AAGTTGTTAACATTGATCAATCTAAAGTATGTTACAACAAaggagatttt
ttttaaaatactaatatttattatttttgtctCTCGTTAGTAACCtgtgt
aaaatatattatttttgcGAATGTTTGGTCCAATGCAAGGTAATCTTGTA
AGGATTCTAGAGAGATGAAATCGTTTTTCCCTTAATTTTTCTAAGCAGTA
AAAATAAACCAATTCTCTTTTTGCACGATTACAATTATGTGTTTGGGCCT
TTTACCTTTTTAATAATAATCCTCTATATTCTAATATCTAATAttatact
tttgttttcataatgttTTATATATACCTTGCAATATTCTTTTAGCTACC
CATTTTGTAATTATGTTTCAGTTGACAGTGCCAGAAACATTTATACAAAA
ATGAACGCTAATGGAAGTGTTTTAAAGGGTATGCTACTTTTTTCAGTCAA
GCTAGTACAGTTTCTAATGTCATTTTTGTCTTGTTTACGTGTTATGCTTC
TCATGTTTTGTCTCGATTATTCAGTCATGAAAGTAAGCTCTTTAGCTTGA
ACAAGTTTTCCCATATTTCAGCGTCCAACGTTCTGtttatttagcaaaaa
aattactttttttaaattgtaaatttcatttgtagattttttttgacata
gacagtattttttttgtttacgcTGCTAGCTTCTTATATGATTTATACGC
GCTTTGCGATTTTTGACATCCGTTCGACTTAGTACTTTTTAGTTTTCGAT
TCAACTTTTTGACTGAATCAGgtaattgattgtttttttcaataattctt
GATGCCCATCTTTGTACGGAAAGACCCGTCAAAAACTGATTACCTACAAG
CTTTTGGAATATAACcggtgtttttcatttgtatcCATACAAAAGATAAG
GgcttgaatttcaaaatatagtACCTTCTCAACCCGGAAAACTAATTAGG
GCAAGTTTTGTCAATGATCTGTTCGTagcatttatttttcaaagctaCAC
ATGAATGAGCTCGATTCTACCATGGATAGCAATGCTTTCTCCTAACGCCA
TGTCATGGGGGGAGAATACTTTCAGTACCCAATGCACAggctgcaaaatt
aaagtctgaagacaaaatcacgcttttactcgaaatttttgtatgctttt
tacatgacatttatttctgattcattcgaatttattgacactaataaagt
tatcagctgtaagttgtaaagcaagtaatatgggaataaaatcacgtgaa
ctttttcgagtaatcacatgttttggcTGCATTGATAtgattttgcaacc
cgtgtatttaACTTTTCCTTATGCTCTTCATAAGTTTAACTTTTGTCATT
CTAATTTTTGCTGCTAACTTTTGTTGCTTTAAGATACGTCGTTGAATCGT
ACAATATGTTTATGCTTCAACTTCATTATCATTATTACTACTACTAGTTT
ttagaaagaaatattttggtttttataGATATACAAGAAACGTGATACAA
AAATCACacatagtttattcttattttgttgTTGTCAACTTGAccccttt
ttctatttttgcctCGATTTCGAAATCACAAGATTTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00023803-exon-sc0000462-1491911889:152948..153051 | TCONS_00023803-exon-sc0000462-1491911889:152948..153051 | Clytia hemisphaerica | exon |
| TCONS_00023803-exon-sc0000462-1510915933:152948..153051 | TCONS_00023803-exon-sc0000462-1510915933:152948..153051 | Clytia hemisphaerica | exon |
| TCONS_00023803-exon-sc0000462-1575043694:152948..153051 | TCONS_00023803-exon-sc0000462-1575043694:152948..153051 | Clytia hemisphaerica | exon |
| TCONS_00023803-exon-sc0000462-1491911889:159970..160402 | TCONS_00023803-exon-sc0000462-1491911889:159970..160402 | Clytia hemisphaerica | exon |
| TCONS_00023803-exon-sc0000462-1510915933:159970..160402 | TCONS_00023803-exon-sc0000462-1510915933:159970..160402 | Clytia hemisphaerica | exon |
| TCONS_00023803-exon-sc0000462-1575043694:159970..160402 | TCONS_00023803-exon-sc0000462-1575043694:159970..160402 | Clytia hemisphaerica | exon |
| TCONS_00023803-exon-sc0000462-1491911889:163713..163859 | TCONS_00023803-exon-sc0000462-1491911889:163713..163859 | Clytia hemisphaerica | exon |
| TCONS_00023803-exon-sc0000462-1510915933:163713..163859 | TCONS_00023803-exon-sc0000462-1510915933:163713..163859 | Clytia hemisphaerica | exon |
| TCONS_00023803-exon-sc0000462-1575043694:163713..163859 | TCONS_00023803-exon-sc0000462-1575043694:163713..163859 | Clytia hemisphaerica | exon |
| TCONS_00023803-exon-sc0000462-1491911889:164141..164233 | TCONS_00023803-exon-sc0000462-1491911889:164141..164233 | Clytia hemisphaerica | exon |
| TCONS_00023803-exon-sc0000462-1510915933:164141..164233 | TCONS_00023803-exon-sc0000462-1510915933:164141..164233 | Clytia hemisphaerica | exon |
| TCONS_00023803-exon-sc0000462-1575043694:164141..164233 | TCONS_00023803-exon-sc0000462-1575043694:164141..164233 | Clytia hemisphaerica | exon |
| TCONS_00023803-exon-sc0000462-1491911889:167357..169935 | TCONS_00023803-exon-sc0000462-1491911889:167357..169935 | Clytia hemisphaerica | exon |
| TCONS_00023803-exon-sc0000462-1510915933:167357..169935 | TCONS_00023803-exon-sc0000462-1510915933:167357..169935 | Clytia hemisphaerica | exon |
| TCONS_00023803-exon-sc0000462-1575043694:167357..169935 | TCONS_00023803-exon-sc0000462-1575043694:167357..169935 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000462 | supercontig | sc0000462:152948..169935 + |
Blast
BLAST of TCONS_00023803 vs. Swiss-Prot (Human)
Match: SMAD1 (Mothers against decapentaplegic homolog 1 OS=Homo sapiens GN=SMAD1 PE=1 SV=1) HSP 1 Score: 586.645 bits (1511), Expect = 0.000e+0 Identity = 319/468 (68.16%), Postives = 348/468 (74.36%), Query Frame = 3
Query: 138 MGMSSLFSFTSPAVKRLLGWKQGDEEEKWAEKAIDSLVKKLKKRKGALEELEKALSNPTGESNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCVYAFSLNKKEVCINPYHYRRVETXXXXXXXXXRQSEY-PRGPLPYHMQH--ANHQGMPNNANFPS---------FSHS--RSXXXXXXXXXXXY-NGVMSEDGGSPRPDLSMDADNIPP---------------------------------DVTPITYNEPTNWCSIAYYELNIRVGEPFQASGTSLVIDGFTDPNTSSDRFCLGGMSNVNRNSTIENTRRHISKGVHLYYVGGEVFAECLSDSAIFVQSRNCNYHHGFHPTTVCKIPPQCTLKIFNNQEFAQLLSQSVNHGYEAVYELTKHCTIRMSFVKGWGAEYHRQDVTSTPCWVEIHLHGPLQWLDKVLTQMGSPAGIIGSVS 1397
M ++SLFSFTSPAVKRLLGWKQGDEEEKWAEKA+D+LVKKLKK+KGA+EELEKALS P SNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECC + F +KEVCINPYHY+RVE+PVLPPVLVPR SEY P+ L ++ N MP NA FP F HS S Y + S D GSP M AD PP DV + Y EP +WCSI YYELN RVGE F AS TS+++DGFTDP+ + +RFCLG +SNVNRNSTIENTRRHI KGVHLYYVGGEV+AECLSDS+IFVQSRNCNYHHGFHPTTVCKIP C+LKIFNNQEFAQLL+QSVNHG+E VYELTK CTIRMSFVKGWGAEYHRQDVTSTPCW+EIHLHGPLQWLDKVLTQMGSP I SVS
Sbjct: 1 MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQPSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEVCINPYHYKRVESPVLPPVLVPRHSEYNPQHSLLAQFRNLGQNEPHMPLNATFPDSFQQPNSHPFPHSPNSSYPNSPGSSSSTYPHSPTSSDPGSP---FQMPADTPPPAYLPPEDPMTQDGSQPMDTNMMAPPLPSEINRGDVQAVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFTDPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNHGFETVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS 465
The following BLAST results are available for this feature:
|
