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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023822 ID=TCONS_00023822|Name=TCONS_00023822|organism=Clytia hemisphaerica|type=transcript|length=1819bp AAGCTTTACCATCGAAACAATTTGAGGAGATTTGAGATTGAAATTTCAAC TGTCATCAAGGAGATAATATTAGGTTTTGGTATTATGTAGCTGTTTAAAT TGGgaagaaagttaaaaaacaaGAGTCAAGAGAGCAAATATTTTAATAAC ATTAACCCATGTTGAAATCGTTTTCAAAAGATGGAAATGAAACATAAAGT TTATGAAATCTCGGAAGAAGAAAACACTGTCAAGTCAGCAGACCTCAAGG AAGACGAGACGTGCCAACGTAGACTACTATTCAAAGATTTCTGTCAAAAT GTGACAATGCATGGGTTTCGCTTTTTATTCGAAGGGTCATTCTTAAGGAG ATTTATTTGGTTTTTGATAACAAGTACTATTACAGCATTTGTTGTGGttt tattttacaatttattaTTCGATTATTTGGAACATAAAACAGTAACGGTT AATGATTTCGAAGATGTAGCTACGCTACAATTCCCGACTGTCTCCATCTG CCCATTAAACACTATATCGAACCGTAAACTTCAAGAACTAAAAGGTAATT TAACAACagatgaaataaaatatttcatagaTGGAgtgatcaaaaacaaa acaaactcgACTGTGTATAAAAAAGTTATGAGTATAATTAACAAAGAAGG AATCAATACTTACATGGAACTTTTGAATGCATATATGAATTCATACGAAG ATTTCGCGGACACAAAATTAATTcggacaatttttgacaaaggCGGTGAA AAACAGAATCAGTCGATTTCGTGTGACTTTTACGAGAGACCATGCAATAA ATCAGATTTTGTAATTGTTGAATATTTACCGAAAatgttatgttttgatt ttaatacaTATCAAAAAGGTAACCCAGGGCTCACCATTAGAAGTAACGGA TATTTCAATGGTTTTTCATTGACCTTTGATCTGTCAGATATTAAGAAAAT TAGTGTGTTGGATGGATTTTACCTCGAGATGACAAGTTATGGCAACACTT TTGGAATGAACACTGATAATGAAATAATCAGCGTCAACCCTGGGTGGGAA ACGGCTGTTAAGATTACGCAAACTGAGACACGGCATTTGAAAAGCAAATG TGGTGAAAAAGagctgaaattcatcaaagatcGACCATACACGAAAACGA CAAGTATAAACGACTGTATGTTTCAACATGTTTACAAAAAGTTCGGTTGC GCAGGCCCTGATATCTATCATCAAGTGCAagGGATACCTTACTGTACCAT AAAAGAAATGGCTGGCTACTTTCATTACAGAGacaATGAAGACGTTGAAA AACAATGTATTAAGAGTTGCCCAAACGAATGTCGCAGAGTTGGTTATAAC TTTCTTAAAGATAAACGCAAATTAGGGAATCGTGGAGTTTATAAAATACT CCAACATGATATGCCTGGATGGGGGAATAAAACCATTACCGAAATTGCGG AAAACGTACGagAGAATATAGTTAGGATTCACATTTCATTCTtccaaaat caaattaaaattgaagaaattacCGAAAAAGTGGAATGGATAACTTTGAT AGCGACAATCGGAGGAAACATCGGACTTGGTCTTGGCTTCAGTTTTGTGA cagcttttgaatttttgttcttcttttaCGATTATTTCAATCTTCTGTTC ACTAAgaagagaaaataaaaactaGCCATTTAGAACAGTCGGTAAAAAGA CTCTTTTAGAATCTTAGAATCTTTCCAACATTGCGTAATGTTTGTAGTGT GTAGGCTCTGGATGAAACGGCCTACTTTTCACCCTGccttttctaatttt gaatttaagtaGGCAGAGG Run BLAST on NCBI protein sequence of TCONS_00023822-protein >TCONS_00023822-protein ID=TCONS_00023822-protein|Name=TCONS_00023822-protein|organism=Clytia hemisphaerica|type=polypeptide|length=495bp
MEMKHKVYEISEEENTVKSADLKEDETCQRRLLFKDFCQNVTMHGFRFLF EGSFLRRFIWFLITSTITAFVVVLFYNLLFDYLEHKTVTVNDFEDVATLQ FPTVSICPLNTISNRKLQELKGNLTTDEIKYFIDGVIKNKTNSTVYKKVM SIINKEGINTYMELLNAYMNSYEDFADTKLIRTIFDKGGEKQNQSISCDF YERPCNKSDFVIVEYLPKMLCFDFNTYQKGNPGLTIRSNGYFNGFSLTFD LSDIKKISVLDGFYLEMTSYGNTFGMNTDNEIISVNPGWETAVKITQTET RHLKSKCGEKELKFIKDRPYTKTTSINDCMFQHVYKKFGCAGPDIYHQVQ GIPYCTIKEMAGYFHYRDNEDVEKQCIKSCPNECRRVGYNFLKDKRKLGN RGVYKILQHDMPGWGNKTITEIAENVRENIVRIHISFFQNQIKIEEITEK VEWITLIATIGGNIGLGLGFSFVTAFEFLFFFYDYFNLLFTKKRK Run BLAST on NCBI transcript from alignment at sc0000462:131454..139151- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023822 ID=TCONS_00023822|Name=TCONS_00023822|organism=Clytia hemisphaerica|type=transcript|length=7698bp|location=Sequence derived from alignment at sc0000462:131454..139151- (Clytia hemisphaerica) AAGCTTTACCATCGAAACAATTTGAGGAGATTTGAGATTGAAATTTCAAC
TGTCATCAAGGAGATAATATTAGGTTTTGGTATTATGTAGCTGTTTAAAT
TGGGAAGAAAGTTAAAAAACAAGAGTCAAGAGAGCAAATATTTTAATAAC
ATTAACCCATGTTGAAATCGTTTTCAAAAGATGGAAATGAAACATAAAGT
TTATGAAATCTCGGAAGAAGAAAACACTGTCAAGTCAGCAGACCTCAAGG
AAGACGAGACGTGCCAACGTAGACTACTATTCAAAGATTTCTGTCAAAAT
GTGACAATGCATGGGTTTCGCTTTTTATTCGAAGGGTCATTCTTAAGGAG
ATTTATTTGGTTTTTGATAACAAGTACTATTACAGCATTTGTTGTGGTTT
TATTTTACAATTTATTATTCGATTATTTGGAACATAAAACAGTAACGGTT
AATGATTTCGAAGATGTAGCTACGCTACAATTCCCGACTGTCTCCATCTG
CCCATTAAACACTATATCGAACCGTAAACTTCAAGAACTAAAAGGTAATT
TAACAACAGATGAAATAAAATATTTCATAGATGGAGTGATCAAAAACAAA
ACAAACTCGACTGTGTATAAAAAAGTTATGAGTATAATTAACAAAGAAGG
AATCAATACTTACATGGAACTTTTGAATGCATATATGAATTCATACGAAG
ATTTCGCGGACACAAAATTAATTCGGACAATTTTTGACAAAGGCGGTGAA
AAACAGAATCAGTCGATTTCGTGTGACTTTTACGAGAGACCATGCAATAA
ATCAGATTTTGTAATTGTTGAATATTTACCGAAAATGTTATGTTTTGATT
TTAATACATATCAAAAAGGTAACCCAGGGCTCACCATTAGAAGTAACGGA
TATTTCAATGGTTTTTCATTGACCTTTGATCTGTCAGATATTAAGAAAAT
TAGTGTGTTGGATGGATTTTACCTCGAGATGACAAGTTATGGCAACACTT
TTGGAATGAACACTGATAATGAAATAATCAGCGTCAACCCTGGGTGGGAA
ACGGCTGTTAAGATTACGCAAACTGAGGTAATTATAACGTAATCTTTTTT
GTGATAGTCCTAGGTTGTTCATCTATCGTAGTGCAAAGTAAAGGATTCGG
CTACGGTGCACAAGATCGTGGGTTCAATCCGAAAGCAGGTCATTACAAAG
ACTTCGCGCTTAATGCAGAATGGTACATAATGCCTCTCTGCTTAATGTTT
AGGCCGCGCGCATCCCCAGAATTGATTTTGATCTATCAAAGCATATCAGA
GGGGACGCGTGCAACCTACTTAAAGTTCAGTAATTAAAGAGAAGGATTAA
GGGTGACCTTCTGGTAGATAGCTACAATCATGGTCATAATTATTTGAGAA
AAAAGGGAAATTCCCACGAAATCTTACAACCACAAACATTCCAAATTGCT
CTAAATTAGGTTCGAAGGGTAGAGTTCTAACTCTGAGTTTTAATGCTAGA
CATAAGACTTAGGACCTTAGGATCTGAGGATCCAAAGTCCAGGAATGATC
CAATAGGGCTCAGAATAATAGCCTGGAAGTCTATAAACCCCTCCCGAATT
GAAATATTTGAATAAATTTATCAGTCAAGAATAGAGACAAATTTATTTTC
CGATACTCGGAGTTTCGTGCCGTTTCAGGCAGTCTTCAGTCAGATTTAAA
AAAATTACAAAAACGACATTCGCAATGTATGATGTCTTCATTTGTCAAAA
TTGACGTCATTTCAGTCTTTGCTGTCAAACAAGGCGAGGGTGTGCTTGTT
GACATGTTTACATTTTTATATCAGTTCAGATTTTGAGTTCATAATGTCAC
CGAATTTTGTGGCGATTTCAAGCTTCTCATTTAAACAAAAGATTACATTT
CATCGAGGCTCGTTGGAATCCACCAGTTCGTCTAACAATTTTCCACGATA
CGGTTGGGTTCTTGTTTTGATGTTTGAATTTCCAATATTGTTTGGAAAGT
TCTGTTTCGTACTCATACCGCTCGTGATTAAACGACTTCTTGTGGTTGCT
GAACCGTTTTTTGAATGTAGTTTCAGCGAGACCAATGCACTTCATCATTG
GCACGGTATCGTCATTAGTATCGTCATCGATCTATATCGTGGCTTCATAA
ATTGTGTTTTCGGCGAAACATTCTCCATTAAGCGGACATTGGTTTTTCAC
GATACAGTTGCAGGTAGGAACATCTTGGTTGTTGGTCGGCTTGAGAATAC
GTTTGTTGTGGCTATCGATGAGCGATTTTATATTTTTCGTACAACTATAG
CTCACTTTTACTGTGTTACGATTGAATATCTTGTGGAACTTATGTTGTTT
GGGAAAATGTTTGTCGAGGAGTGTCAGGAAACGATGTCCAATTTTGGTGG
ATACTGATTTGCTGTATGGTGGATTGAACCAGATTATTTTGCGCTTACAG
TTACGGTTACGGTTCTGCGTTTGTTGAACTGGGGGATTGTTTGTCAAATT
TACGTCATAACCCGAGTCTCTGAGAGCTCTCTCGTACACCGGTTTTGCGT
TGTTGAATATGTCTTCTGACGAAGAATGTTCAGAAAGTCGGTTTTCAAAG
GTTTATAGCTGCCGTCGATTAAGTTCAATGTGATATCCAGAAAATCAACG
ATACGTTTGTTGCATTCGATAACAATGTCCAGTTCCTCCTCTTTGAATGT
TCTTTGGAGGTCTTTTTTGATCGTTTCAGATTCTGAGCCGTTTTCATTAG
TTTCGAACACAGCCAAAACATCGTCACGGTAAAGTCCGTATTTGTTCTTG
TCATAGCGTTGACTAATCAACCGTTGCATATATATACCAACTAACTCACA
GAGCTCTGCGCCGTCGTATGCACCCATTGTTACGTCAAATGAGCCCCCTT
TCTTCTTGATCCATGCTTGGTCACCGTCAAATAGGAGTGATTTACGAGCA
TGGTTTATGATTTTGATATCAGCGTTTGGGATGTCAACTAACGTTTTTGC
GAAGTCTATTGCTTTTTTCATTAGCGATTCTCTTATGGATGGATAGAAGT
CCTTGATATCGAAAACAATAAATCTATGCTGACCTTTGTTTGGTATGTCA
GTAAACCATTTGATTACTTCGTTTGTGCTCTGCCATTGATTCACGTTTAA
TGCTGCTTTTAGCTGTTTATTTATCTTATCGAGGATGCCTTTACTGATAC
GTCCCAGTTCGTTCTTCGCTGGATTCAGAAGTCTCGTTTTGGGGTTGTTT
TGGAAGTTTGGTTTGTGGTCTTTCAAACTTATGAATGCTTCACTTCGAGC
GTTTGTCAGCATGCGGTCAAAACAGTGTTTGTTAAATTTATCAATTAACC
CAAAAGCGACTTTCTCGCCCACTTTGAATTGCTAAAAATGAGGAATTAAC
CAAAATTCTCAATATATTTTGACCGGATGAGGAGAAATTAAAAAGAAACG
TAATTATAACAGCACATTTGAAAAATTATCGACTTCTTAAGACAACGAAT
TAAACTTAGGTTTTCAATTATCAATACCAAGCTACCAATTATCTTTCAAA
TTTAGACACGGCATTTGAAAAGCAAATGTGGTGAAAAAGAGCTGAAATTC
ATCAAAGATCGACCATACACGAAAACGACAAGTATAAACGACTGTATGTT
TCAACATGTTTACAAAAAGTTCGGTTGCGCAGGCCCTGATATCTATCATC
AAGTGCAAGGTAATACACGTTTTTTTTTATTAGAACCCAGTTTATAAGAA
CATTTAGGCTGAAATTCGTCAAAAAATTAAGAACATCGTAAGAACATGCC
CAGCCTCACTTTGAAAAAAATGACAAGAAACTAAAATTTTTCCTCTTTTC
AAGCAGTTTTAAACGAACTTAGGGAAGGATTTTCTAAAATCAAGAGTCAA
ATATTGTCCAAATTTTACCAATTTTAAGTGCTCTTTATTTTGCATGATGA
TGTCGATTTAGAGAGAAAAATTAAGAACACATTTCAGAACAGTTTAGGCT
GAAAATTGCTAAAAAAATAGGCACATCCAGGCTCAGCCAAATTTTAGGTG
TTCTAATAAAAAAAAACGTGTACAGTAAAATCCTGCATGATTTCCAATGT
AAACAGGGTGCGTTGACAAGGTGGCCTGAGGGGGTTCCCAGTATTAATCA
CTGCTCCTTCCCATGTTTCGTTCAGCTAATAGATAGCAGCCAAGCCGTGT
ACCCTGTAAAAACTATCAAAAGACTGTCTCAAAGTCCTACATTGTTACAC
GTTTTTTTATAAGAACACAAGGCTTGGATACCTAAAATATTAGGAACAAC
ACATTTTAGCGCTTTGTGGACTCTAAAACACTCGATTTCTTAAGGAAAAT
GGTAAAAAATACTCACAAAATGGCGAAAATAAGAGCATGCTTAATCCTTA
AGAACATTTTTCAAGTTCAAAACTCAAAAAGCTAAGAACAATCGCAGGCT
ACAAAAATGTTGAATGTTTCTATAAAAAAGGCGTATGCTATCTACGTAAA
AAAACATTGAGTAGGCTTTACGCTTTTGATAGTATCACTGCTAAAACCGA
GGATACAATGTAGTAAACAAGTGAATTGTCAGAATTCAATCATAAAAGGT
ACTGAAATAATATACAAAAAAGCTACTACGTTCGTTCGACGGACAAGCAA
TTAAATAAAGCTAAGGCCTTGCAGGCGTAAAATGGTTGAAATATAAAAAC
AAATTCTTACGTTTCTTTATGGGGAAGATACTGTTTTATTTGCGATTTCC
TTTGTTTTCTTAGGGATACCTTACTGTACCATAAAAGAAATGGCTGGCTA
CTTTCATTACAGAGGTAAGATTTCGAAAATGGGTCATTCCGTCATCTAAA
ATGCAGCGCAGATATTAAGGCATAATTTTCAGTCCATAACAGCTTATATC
TCGTATTCCGCCTTTATCCTGTAACCAAAGTCAAAAGAAATCATAGCTTA
GGAGAGTATTTTCATGTGTGAAAATTTTGAAATTCAGGGACCTCCTAGTA
AAGTATTTTTTTTCCGAAAGCTATCTTTAAGGTAGATGTTTCACTCCTTT
TCAAGCATATTGTCACCTCTATTGATTCATAACAGCAAGCAGCACCAAAT
ATAACGAAAATCTAACAAAGAAATTCACAAGCACAAATACATATCTTTTA
CTAAGCTGAAAGGGAGATTATTTTAACAAAAAGCCTTCTGAACATGGTAG
AAACGGTATCATTCTCATTAACCCAGTTCCACAAGCATCACATGATAAAA
CTCTGTTTATTCACGGTCATGTAAAGCCTTTTGCTCATCGTCTAGCGAAA
AAAGTTTCTTATAGAAATATATAGGAAGTATATCTATAGAGGTCTGCGAT
TCAGACTAGGTCATGTACCAGTAGTTTAGCCCTTTCCGTAACCACGGGGA
AAAAATGGCAAAAAGAATTGACAAAAATTGAAAATGAAAAAAAATATTTT
GAGCAGACAATGGCATGTATATTATATTTGTAATCACCAGTTGTTAGCCG
CCAGGCGCAATGTCAAATATACTGGACTTTTTTGCCCAGTTTTTTTTTGT
GCGGGTCCTCAATTTTGATTCTAAAAAATATCATTTTGCAAAAGGGTTGT
CGTTTTTGCAATGTCAAATATACATGCCATGGGCCTGTCGAAAAATTTCC
GCAATGTAAAATATATACTTGACATGGACACAGAAAGGGTTAGAGGGTTA
TGGCAAAGTTTTCTTGGTAAAAAGATTCATTAAAAACTACTTTCACTTTC
ACTTTCAGACAATGAAGACGTTGAAAAACAATGTATTAAGAGTTGCCCAA
ACGAATGTCGCAGAGTTGGTTATAACTTTCTTAAAGATAAACGCAAATTA
GGGAATCGTGGAGTTTATAAAATACTCCAACATGATATGCCTGGATGGGG
GAATAAAACCATTACCGAAATTGCGGAAAACGTACGGTAAGCTCCAGTAG
ACCAGCTTTTTTAATTTTGAAAGTTTTCGAAAAAATGGCTTATTTTGCTC
TTATTCGTTAATCTTAGGCTCGATTTTACTGCTAGCGTTACCACCTCACA
AATAAATTTTTCGCGTGGTCGAAAATTCGCGAAATTTGCGACATTTACTT
TCGCAAATTTGACGAAATATACTTTTTCGGAAACAAAATCTTTCGCCAAT
CAAAATATAAAAATAAAAAATTTTCAGATGAAAAACTGGCTGAGGGATAG
ACTGGGAATCCAGTCGTTTATAACGTTTTTGTTGGAAGCGGGAAATTTTT
ATGTCGGAATATGGTTAAAATAAACGACTGGGCTAAGGTGGTTTCCGTAG
CTTACGGGAGTTCCAGCAGGGCCCGCAGATTTCTGCGGGGTGAGAAAACA
ATCATATACAAAAAAATATGTAAACAAATAAAAATTTCAGCCAATGAGAA
TTTCTAAGTGAAAGAAAAAAAATCAAACCAAAACAAACTAACAAGACCCC
CTGAAAATGTTATCCAAAAACATGAAAAAAGAGAATTTTTAAGAAAAGTT
TGTTGTGCACAAAATATTCTAGACGACTATATTGATGCTCCTGTCAAGTT
TTCTACTTTCTATTTTTTACTGAGTTAAGTCGTCTAGCATGCTAGACTAG
CTGAGGGACAAATACTTCTTGAATAGGATTGAAACTTTTTTCTTTTAAAT
TAGCTTTTCACAGGCTAAAAAGTACCATAAATCTTACATTTTATTCAAAG
TTTGAAGTTTAAGCGATTTTTCATTTTTTTCAAAAATTTTTTCGCGAGGA
TAGACTTTCGCGAGTGGCCCTTCCAGGAATTTTCAAAGACATTAACTTTC
GAGAAAAGGGCTAAAATTCGCGAAAATCGCGAAAGTTTTTACTTGCAAAA
GCTTTTGCATCTTCTCATATTCCTCCAATATTTCCTCCCTTAAATTAATT
CATTTAAATTTAATTTCTTTTTAGAGAGAATATAGTTAGGATTCACATTT
CATTCTTCCAAAATCAAATTAAAATTGAAGAAATTACCGAAAAAGTGGAA
TGGATAACTTTGATAGGTGAGTAAAGAACATTCCCCCACTTTGTTCCTTT
AGTTTAATATATCTATCAACCCTATATTTTGGTTTTAAGATCGATGTTTC
TTTTTGCTGAGTTAGCACAACTTTAAAACCCAGATATATCGTGATCTAGC
CATCGAACCTAACACTTGAACCTGATTCAAAAAGTCGATTTCAGTGATGA
CGTCAGCAGGATTTTGAGTCACTTCGGAAAATTTTAGGGGTCTAATTGAC
GAAACCAATTATCATACCTACCTTTCGTGATCTTATATAAATAAGTCGAA
ATTATTTTTGAAAACTTGAAAATCATGTTTCCCGACAATTGACATCATCA
TAAAATGCCTCAGAATGCCTCAACAAATTTGAAAACTAGAAACAGCTCAG
TCACCTTACTTTGAAAATTCATTTTCTTTAGCGACAATCGGAGGAAACAT
CGGACTTGGTCTTGGCTTCAGTTTTGTGACAGCTTTTGAATTTTTGTTCT
TCTTTTACGATTATTTCAATCTTCTGTTCACTAAGAAGAGAAAATAAAAA
CTAGCCATTTAGAACAGTCGGTAAAAAGACTCTTTTAGAATCTTAGAATC
TTTCCAACATTGCGTAATGTTTGTAGTGTGTAGGCTCTGGATGAAACGGC
CTACTTTTCACCCTGCCTTTTCTAATTTTGAATTTAAGTAGGCAGAGG Coding sequence (CDS) from alignment at sc0000462:131454..139151- >TCONS_00023822 ID=TCONS_00023822|Name=TCONS_00023822|organism=Clytia hemisphaerica|type=CDS|length=8928bp|location=Sequence derived from alignment at sc0000462:131454..139151- (Clytia hemisphaerica) CGACAATCGGAGGAAACATCGGACTTGGTCTTGGCTTCAGTTTTGTGACA GCTTTTGAATTTTTGTTCTTCTTTTACGATTATTTCAATCTTCTGTTCAC TAAGAAGAGAAAATAAAGAGAATATAGTTAGGATTCACATTTCATTCTTC CAAAATCAAATTAAAATTGAAGAAATTACCGAAAAAGTGGAATGGATAAC TTTGATAGACAATGAAGACGTTGAAAAACAATGTATTAAGAGTTGCCCAA ACGAATGTCGCAGAGTTGGTTATAACTTTCTTAAAGATAAACGCAAATTA GGGAATCGTGGAGTTTATAAAATACTCCAACATGATATGCCTGGATGGGG GAATAAAACCATTACCGAAATTGCGGAAAACGTACGGGATACCTTACTGT ACCATAAAAGAAATGGCTGGCTACTTTCATTACAGAGACACGGCATTTGA AAAGCAAATGTGGTGAAAAAGAGCTGAAATTCATCAAAGATCGACCATAC ACGAAAACGACAAGTATAAACGACTGTATGTTTCAACATGTTTACAAAAA GTTCGGTTGCGCAGGCCCTGATATCTATCATCAAGTGCAAGATGGAAATG AAACATAAAGTTTATGAAATCTCGGAAGAAGAAAACACTGTCAAGTCAGC AGACCTCAAGGAAGACGAGACGTGCCAACGTAGACTACTATTCAAAGATT TCTGTCAAAATGTGACAATGCATGGGTTTCGCTTTTTATTCGAAGGGTCA TTCTTAAGGAGATTTATTTGGTTTTTGATAACAAGTACTATTACAGCATT TGTTGTGGTTTTATTTTACAATTTATTATTCGATTATTTGGAACATAAAA CAGTAACGGTTAATGATTTCGAAGATGTAGCTACGCTACAATTCCCGACT GTCTCCATCTGCCCATTAAACACTATATCGAACCGTAAACTTCAAGAACT AAAAGGTAATTTAACAACAGATGAAATAAAATATTTCATAGATGGAGTGA TCAAAAACAAAACAAACTCGACTGTGTATAAAAAAGTTATGAGTATAATT AACAAAGAAGGAATCAATACTTACATGGAACTTTTGAATGCATATATGAA TTCATACGAAGATTTCGCGGACACAAAATTAATTCGGACAATTTTTGACA AAGGCGGTGAAAAACAGAATCAGTCGATTTCGTGTGACTTTTACGAGAGA CCATGCAATAAATCAGATTTTGTAATTGTTGAATATTTACCGAAAATGTT ATGTTTTGATTTTAATACATATCAAAAAGGTAACCCAGGGCTCACCATTA GAAGTAACGGATATTTCAATGGTTTTTCATTGACCTTTGATCTGTCAGAT ATTAAGAAAATTAGTGTGTTGGATGGATTTTACCTCGAGATGACAAGTTA TGGCAACACTTTTGGAATGAACACTGATAATGAAATAATCAGCGTCAACC CTGGGTGGGAAACGGCTGTTAAGATTACGCAAACTGAGCGACAATCGGAG GAAACATCGGACTTGGTCTTGGCTTCAGTTTTGTGACAGCTTTTGAATTT TTGTTCTTCTTTTACGATTATTTCAATCTTCTGTTCACTAAGAAGAGAAA ATAAAGAGAATATAGTTAGGATTCACATTTCATTCTTCCAAAATCAAATT AAAATTGAAGAAATTACCGAAAAAGTGGAATGGATAACTTTGATAGACAA TGAAGACGTTGAAAAACAATGTATTAAGAGTTGCCCAAACGAATGTCGCA GAGTTGGTTATAACTTTCTTAAAGATAAACGCAAATTAGGGAATCGTGGA GTTTATAAAATACTCCAACATGATATGCCTGGATGGGGGAATAAAACCAT TACCGAAATTGCGGAAAACGTACGGGATACCTTACTGTACCATAAAAGAA ATGGCTGGCTACTTTCATTACAGAGACACGGCATTTGAAAAGCAAATGTG GTGAAAAAGAGCTGAAATTCATCAAAGATCGACCATACACGAAAACGACA AGTATAAACGACTGTATGTTTCAACATGTTTACAAAAAGTTCGGTTGCGC AGGCCCTGATATCTATCATCAAGTGCAAGATGGAAATGAAACATAAAGTT TATGAAATCTCGGAAGAAGAAAACACTGTCAAGTCAGCAGACCTCAAGGA AGACGAGACGTGCCAACGTAGACTACTATTCAAAGATTTCTGTCAAAATG TGACAATGCATGGGTTTCGCTTTTTATTCGAAGGGTCATTCTTAAGGAGA TTTATTTGGTTTTTGATAACAAGTACTATTACAGCATTTGTTGTGGTTTT ATTTTACAATTTATTATTCGATTATTTGGAACATAAAACAGTAACGGTTA ATGATTTCGAAGATGTAGCTACGCTACAATTCCCGACTGTCTCCATCTGC CCATTAAACACTATATCGAACCGTAAACTTCAAGAACTAAAAGGTAATTT AACAACAGATGAAATAAAATATTTCATAGATGGAGTGATCAAAAACAAAA CAAACTCGACTGTGTATAAAAAAGTTATGAGTATAATTAACAAAGAAGGA ATCAATACTTACATGGAACTTTTGAATGCATATATGAATTCATACGAAGA TTTCGCGGACACAAAATTAATTCGGACAATTTTTGACAAAGGCGGTGAAA AACAGAATCAGTCGATTTCGTGTGACTTTTACGAGAGACCATGCAATAAA TCAGATTTTGTAATTGTTGAATATTTACCGAAAATGTTATGTTTTGATTT TAATACATATCAAAAAGGTAACCCAGGGCTCACCATTAGAAGTAACGGAT ATTTCAATGGTTTTTCATTGACCTTTGATCTGTCAGATATTAAGAAAATT AGTGTGTTGGATGGATTTTACCTCGAGATGACAAGTTATGGCAACACTTT TGGAATGAACACTGATAATGAAATAATCAGCGTCAACCCTGGGTGGGAAA CGGCTGTTAAGATTACGCAAACTGAGCGACAATCGGAGGAAACATCGGAC TTGGTCTTGGCTTCAGTTTTGTGACAGCTTTTGAATTTTTGTTCTTCTTT TACGATTATTTCAATCTTCTGTTCACTAAGAAGAGAAAATAAAGAGAATA TAGTTAGGATTCACATTTCATTCTTCCAAAATCAAATTAAAATTGAAGAA ATTACCGAAAAAGTGGAATGGATAACTTTGATAGACAATGAAGACGTTGA AAAACAATGTATTAAGAGTTGCCCAAACGAATGTCGCAGAGTTGGTTATA ACTTTCTTAAAGATAAACGCAAATTAGGGAATCGTGGAGTTTATAAAATA CTCCAACATGATATGCCTGGATGGGGGAATAAAACCATTACCGAAATTGC GGAAAACGTACGGGATACCTTACTGTACCATAAAAGAAATGGCTGGCTAC TTTCATTACAGAGACACGGCATTTGAAAAGCAAATGTGGTGAAAAAGAGC TGAAATTCATCAAAGATCGACCATACACGAAAACGACAAGTATAAACGAC TGTATGTTTCAACATGTTTACAAAAAGTTCGGTTGCGCAGGCCCTGATAT CTATCATCAAGTGCAAGATGGAAATGAAACATAAAGTTTATGAAATCTCG GAAGAAGAAAACACTGTCAAGTCAGCAGACCTCAAGGAAGACGAGACGTG CCAACGTAGACTACTATTCAAAGATTTCTGTCAAAATGTGACAATGCATG GGTTTCGCTTTTTATTCGAAGGGTCATTCTTAAGGAGATTTATTTGGTTT TTGATAACAAGTACTATTACAGCATTTGTTGTGGTTTTATTTTACAATTT ATTATTCGATTATTTGGAACATAAAACAGTAACGGTTAATGATTTCGAAG ATGTAGCTACGCTACAATTCCCGACTGTCTCCATCTGCCCATTAAACACT ATATCGAACCGTAAACTTCAAGAACTAAAAGGTAATTTAACAACAGATGA AATAAAATATTTCATAGATGGAGTGATCAAAAACAAAACAAACTCGACTG TGTATAAAAAAGTTATGAGTATAATTAACAAAGAAGGAATCAATACTTAC ATGGAACTTTTGAATGCATATATGAATTCATACGAAGATTTCGCGGACAC AAAATTAATTCGGACAATTTTTGACAAAGGCGGTGAAAAACAGAATCAGT CGATTTCGTGTGACTTTTACGAGAGACCATGCAATAAATCAGATTTTGTA ATTGTTGAATATTTACCGAAAATGTTATGTTTTGATTTTAATACATATCA AAAAGGTAACCCAGGGCTCACCATTAGAAGTAACGGATATTTCAATGGTT TTTCATTGACCTTTGATCTGTCAGATATTAAGAAAATTAGTGTGTTGGAT GGATTTTACCTCGAGATGACAAGTTATGGCAACACTTTTGGAATGAACAC TGATAATGAAATAATCAGCGTCAACCCTGGGTGGGAAACGGCTGTTAAGA TTACGCAAACTGAGCGACAATCGGAGGAAACATCGGACTTGGTCTTGGCT TCAGTTTTGTGACAGCTTTTGAATTTTTGTTCTTCTTTTACGATTATTTC AATCTTCTGTTCACTAAGAAGAGAAAATAAAGAGAATATAGTTAGGATTC ACATTTCATTCTTCCAAAATCAAATTAAAATTGAAGAAATTACCGAAAAA GTGGAATGGATAACTTTGATAGACAATGAAGACGTTGAAAAACAATGTAT TAAGAGTTGCCCAAACGAATGTCGCAGAGTTGGTTATAACTTTCTTAAAG ATAAACGCAAATTAGGGAATCGTGGAGTTTATAAAATACTCCAACATGAT ATGCCTGGATGGGGGAATAAAACCATTACCGAAATTGCGGAAAACGTACG GGATACCTTACTGTACCATAAAAGAAATGGCTGGCTACTTTCATTACAGA GACACGGCATTTGAAAAGCAAATGTGGTGAAAAAGAGCTGAAATTCATCA AAGATCGACCATACACGAAAACGACAAGTATAAACGACTGTATGTTTCAA CATGTTTACAAAAAGTTCGGTTGCGCAGGCCCTGATATCTATCATCAAGT GCAAGATGGAAATGAAACATAAAGTTTATGAAATCTCGGAAGAAGAAAAC ACTGTCAAGTCAGCAGACCTCAAGGAAGACGAGACGTGCCAACGTAGACT ACTATTCAAAGATTTCTGTCAAAATGTGACAATGCATGGGTTTCGCTTTT TATTCGAAGGGTCATTCTTAAGGAGATTTATTTGGTTTTTGATAACAAGT ACTATTACAGCATTTGTTGTGGTTTTATTTTACAATTTATTATTCGATTA TTTGGAACATAAAACAGTAACGGTTAATGATTTCGAAGATGTAGCTACGC TACAATTCCCGACTGTCTCCATCTGCCCATTAAACACTATATCGAACCGT AAACTTCAAGAACTAAAAGGTAATTTAACAACAGATGAAATAAAATATTT CATAGATGGAGTGATCAAAAACAAAACAAACTCGACTGTGTATAAAAAAG TTATGAGTATAATTAACAAAGAAGGAATCAATACTTACATGGAACTTTTG AATGCATATATGAATTCATACGAAGATTTCGCGGACACAAAATTAATTCG GACAATTTTTGACAAAGGCGGTGAAAAACAGAATCAGTCGATTTCGTGTG ACTTTTACGAGAGACCATGCAATAAATCAGATTTTGTAATTGTTGAATAT TTACCGAAAATGTTATGTTTTGATTTTAATACATATCAAAAAGGTAACCC AGGGCTCACCATTAGAAGTAACGGATATTTCAATGGTTTTTCATTGACCT TTGATCTGTCAGATATTAAGAAAATTAGTGTGTTGGATGGATTTTACCTC GAGATGACAAGTTATGGCAACACTTTTGGAATGAACACTGATAATGAAAT AATCAGCGTCAACCCTGGGTGGGAAACGGCTGTTAAGATTACGCAAACTG AGCGACAATCGGAGGAAACATCGGACTTGGTCTTGGCTTCAGTTTTGTGA CAGCTTTTGAATTTTTGTTCTTCTTTTACGATTATTTCAATCTTCTGTTC ACTAAGAAGAGAAAATAAAGAGAATATAGTTAGGATTCACATTTCATTCT TCCAAAATCAAATTAAAATTGAAGAAATTACCGAAAAAGTGGAATGGATA ACTTTGATAGACAATGAAGACGTTGAAAAACAATGTATTAAGAGTTGCCC AAACGAATGTCGCAGAGTTGGTTATAACTTTCTTAAAGATAAACGCAAAT TAGGGAATCGTGGAGTTTATAAAATACTCCAACATGATATGCCTGGATGG GGGAATAAAACCATTACCGAAATTGCGGAAAACGTACGGGATACCTTACT GTACCATAAAAGAAATGGCTGGCTACTTTCATTACAGAGACACGGCATTT GAAAAGCAAATGTGGTGAAAAAGAGCTGAAATTCATCAAAGATCGACCAT ACACGAAAACGACAAGTATAAACGACTGTATGTTTCAACATGTTTACAAA AAGTTCGGTTGCGCAGGCCCTGATATCTATCATCAAGTGCAAGATGGAAA TGAAACATAAAGTTTATGAAATCTCGGAAGAAGAAAACACTGTCAAGTCA GCAGACCTCAAGGAAGACGAGACGTGCCAACGTAGACTACTATTCAAAGA TTTCTGTCAAAATGTGACAATGCATGGGTTTCGCTTTTTATTCGAAGGGT CATTCTTAAGGAGATTTATTTGGTTTTTGATAACAAGTACTATTACAGCA TTTGTTGTGGTTTTATTTTACAATTTATTATTCGATTATTTGGAACATAA AACAGTAACGGTTAATGATTTCGAAGATGTAGCTACGCTACAATTCCCGA CTGTCTCCATCTGCCCATTAAACACTATATCGAACCGTAAACTTCAAGAA CTAAAAGGTAATTTAACAACAGATGAAATAAAATATTTCATAGATGGAGT GATCAAAAACAAAACAAACTCGACTGTGTATAAAAAAGTTATGAGTATAA TTAACAAAGAAGGAATCAATACTTACATGGAACTTTTGAATGCATATATG AATTCATACGAAGATTTCGCGGACACAAAATTAATTCGGACAATTTTTGA CAAAGGCGGTGAAAAACAGAATCAGTCGATTTCGTGTGACTTTTACGAGA GACCATGCAATAAATCAGATTTTGTAATTGTTGAATATTTACCGAAAATG TTATGTTTTGATTTTAATACATATCAAAAAGGTAACCCAGGGCTCACCAT TAGAAGTAACGGATATTTCAATGGTTTTTCATTGACCTTTGATCTGTCAG ATATTAAGAAAATTAGTGTGTTGGATGGATTTTACCTCGAGATGACAAGT TATGGCAACACTTTTGGAATGAACACTGATAATGAAATAATCAGCGTCAA CCCTGGGTGGGAAACGGCTGTTAAGATTACGCAAACTGAGCGACAATCGG AGGAAACATCGGACTTGGTCTTGGCTTCAGTTTTGTGACAGCTTTTGAAT TTTTGTTCTTCTTTTACGATTATTTCAATCTTCTGTTCACTAAGAAGAGA AAATAAAGAGAATATAGTTAGGATTCACATTTCATTCTTCCAAAATCAAA TTAAAATTGAAGAAATTACCGAAAAAGTGGAATGGATAACTTTGATAGAC AATGAAGACGTTGAAAAACAATGTATTAAGAGTTGCCCAAACGAATGTCG CAGAGTTGGTTATAACTTTCTTAAAGATAAACGCAAATTAGGGAATCGTG GAGTTTATAAAATACTCCAACATGATATGCCTGGATGGGGGAATAAAACC ATTACCGAAATTGCGGAAAACGTACGGGATACCTTACTGTACCATAAAAG AAATGGCTGGCTACTTTCATTACAGAGACACGGCATTTGAAAAGCAAATG TGGTGAAAAAGAGCTGAAATTCATCAAAGATCGACCATACACGAAAACGA CAAGTATAAACGACTGTATGTTTCAACATGTTTACAAAAAGTTCGGTTGC GCAGGCCCTGATATCTATCATCAAGTGCAAGATGGAAATGAAACATAAAG TTTATGAAATCTCGGAAGAAGAAAACACTGTCAAGTCAGCAGACCTCAAG GAAGACGAGACGTGCCAACGTAGACTACTATTCAAAGATTTCTGTCAAAA TGTGACAATGCATGGGTTTCGCTTTTTATTCGAAGGGTCATTCTTAAGGA GATTTATTTGGTTTTTGATAACAAGTACTATTACAGCATTTGTTGTGGTT TTATTTTACAATTTATTATTCGATTATTTGGAACATAAAACAGTAACGGT TAATGATTTCGAAGATGTAGCTACGCTACAATTCCCGACTGTCTCCATCT GCCCATTAAACACTATATCGAACCGTAAACTTCAAGAACTAAAAGGTAAT TTAACAACAGATGAAATAAAATATTTCATAGATGGAGTGATCAAAAACAA AACAAACTCGACTGTGTATAAAAAAGTTATGAGTATAATTAACAAAGAAG GAATCAATACTTACATGGAACTTTTGAATGCATATATGAATTCATACGAA GATTTCGCGGACACAAAATTAATTCGGACAATTTTTGACAAAGGCGGTGA AAAACAGAATCAGTCGATTTCGTGTGACTTTTACGAGAGACCATGCAATA AATCAGATTTTGTAATTGTTGAATATTTACCGAAAATGTTATGTTTTGAT TTTAATACATATCAAAAAGGTAACCCAGGGCTCACCATTAGAAGTAACGG ATATTTCAATGGTTTTTCATTGACCTTTGATCTGTCAGATATTAAGAAAA TTAGTGTGTTGGATGGATTTTACCTCGAGATGACAAGTTATGGCAACACT TTTGGAATGAACACTGATAATGAAATAATCAGCGTCAACCCTGGGTGGGA AACGGCTGTTAAGATTACGCAAACTGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00023822-exon-sc0000462-1575043694:138075..139151 | TCONS_00023822-exon-sc0000462-1575043694:138075..139151 | Clytia hemisphaerica | exon |
TCONS_00023822-exon-sc0000462-1575043694:135443..135596 | TCONS_00023822-exon-sc0000462-1575043694:135443..135596 | Clytia hemisphaerica | exon |
TCONS_00023822-exon-sc0000462-1575043694:134338..134388 | TCONS_00023822-exon-sc0000462-1575043694:134338..134388 | Clytia hemisphaerica | exon |
TCONS_00023822-exon-sc0000462-1575043694:133216..133393 | TCONS_00023822-exon-sc0000462-1575043694:133216..133393 | Clytia hemisphaerica | exon |
TCONS_00023822-exon-sc0000462-1575043694:132136..132227 | TCONS_00023822-exon-sc0000462-1575043694:132136..132227 | Clytia hemisphaerica | exon |
TCONS_00023822-exon-sc0000462-1575043694:131454..131720 | TCONS_00023822-exon-sc0000462-1575043694:131454..131720 | Clytia hemisphaerica | exon |
TCONS_00023822-exon-sc0000462-1510915933:138075..139151 | TCONS_00023822-exon-sc0000462-1510915933:138075..139151 | Clytia hemisphaerica | exon |
TCONS_00023822-exon-sc0000462-1510915933:135443..135596 | TCONS_00023822-exon-sc0000462-1510915933:135443..135596 | Clytia hemisphaerica | exon |
TCONS_00023822-exon-sc0000462-1510915933:134338..134388 | TCONS_00023822-exon-sc0000462-1510915933:134338..134388 | Clytia hemisphaerica | exon |
TCONS_00023822-exon-sc0000462-1510915933:133216..133393 | TCONS_00023822-exon-sc0000462-1510915933:133216..133393 | Clytia hemisphaerica | exon |
TCONS_00023822-exon-sc0000462-1510915933:132136..132227 | TCONS_00023822-exon-sc0000462-1510915933:132136..132227 | Clytia hemisphaerica | exon |
TCONS_00023822-exon-sc0000462-1510915933:131454..131720 | TCONS_00023822-exon-sc0000462-1510915933:131454..131720 | Clytia hemisphaerica | exon |
TCONS_00023822-exon-sc0000462-1491911889:138075..139151 | TCONS_00023822-exon-sc0000462-1491911889:138075..139151 | Clytia hemisphaerica | exon |
TCONS_00023822-exon-sc0000462-1491911889:135443..135596 | TCONS_00023822-exon-sc0000462-1491911889:135443..135596 | Clytia hemisphaerica | exon |
TCONS_00023822-exon-sc0000462-1491911889:134338..134388 | TCONS_00023822-exon-sc0000462-1491911889:134338..134388 | Clytia hemisphaerica | exon |
TCONS_00023822-exon-sc0000462-1491911889:133216..133393 | TCONS_00023822-exon-sc0000462-1491911889:133216..133393 | Clytia hemisphaerica | exon |
TCONS_00023822-exon-sc0000462-1491911889:132136..132227 | TCONS_00023822-exon-sc0000462-1491911889:132136..132227 | Clytia hemisphaerica | exon |
TCONS_00023822-exon-sc0000462-1491911889:131454..131720 | TCONS_00023822-exon-sc0000462-1491911889:131454..131720 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000462 | supercontig | sc0000462:131454..139151 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
Term | Definition |
IPR001873 | ENaC |
Vocabulary: Biological Process
Term | Definition |
GO:0006814 | sodium ion transport |
Vocabulary: Cellular Component
Term | Definition |
GO:0016020 | membrane |
Vocabulary: Molecular Function
Term | Definition |
GO:0005272 | sodium channel activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
biological_process |
GO:0006814 |
sodium ion transport |
cellular_component |
GO:0016020 |
membrane |
molecular_function |
GO:0005272 |
sodium channel activity |
Blast
BLAST of TCONS_00023822 vs. Swiss-Prot (Human)
Match: ASIC5 (Acid-sensing ion channel 5 OS=Homo sapiens GN=ASIC5 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.661e-18 Identity = 109/464 (23.49%), Postives = 192/464 (41.38%), Query Frame = 1
Query: 265 QRRLLFKDFCQNVTMHGFRFLFEG-SFLRRFIWFLITSTITAFVVVLFYNLLFDYLEHKTVTVNDFEDVATLQFPTVSICPLNTISNRKLQELKGNLTTDEIKYFIDGVIKNKTNSTVYKKVMSIINKEGINTYMELLNAYMNSYEDFADTKLIRTIFDKGGEKQNQSI-SCDFYERPCNKSDF--VIVEYLPKMLCFDFNTYQKGNPGLTIRSNGYFNGFSLTFDLSDIKKISVLDGFYLEMTSYGNTFGMNTDNEIIS------VNP-GWETAVKITQTETRHLKSKCGE--KELKFIKDRPYTKTTSINDCMFQHVYKKFGC-----AGPDIYHQVQGIPYCTIKEMAGYFHYRDNEDVEKQCIKSCPNECRRVGYNFLKDKRKLGNRGVYKILQHDMPGWGNKTITEIAENVRENIVRIHISFFQNQIKIEEITEKVEWITLIATIGGNIGLGLGFSFVT 1602
+R+ DF + + HG + + S +RR +W ++ + V Y L +Y T T + + V ++FP V+ C LN TD + F GVI + + KV+ + +T + S+++F+ + IR +KG N ++ C+F+ +PC+ DF V EY CF FN + + +G G SL F+ + + + D L G F +++ ++ ++P G V I Q +T H + GE +K Y+ + + +C QH+ K+ GC G I +Q C + + + ++D V SCP C + Y ++ K L +K + + + +REN+V+I I++ KI + + V L+A +GG +GL G S +T
Sbjct: 33 ERKKFDHDFAISTSFHGIHNIVQNRSKIRRVLWLVVVLGSVSLVTWQIYIRLLNYFTWPTTTSIEVQYVEKMEFPAVTFCNLN------------RFQTDAVAKF--GVIFFLWH--IVSKVLHLQEITANSTGSREATDFAASHQNFSIVEFIR---NKGFYLNNSTLLDCEFFGKPCSPKDFAHVFTEY---GNCFTFNHGETLQAKRKVSVSG--RGLSLLFN---VNQEAFTDNPALGFVDAGIIFVIHSPKKVPQFDGLGLLSPVGMHARVTIRQVKTVHQEYPWGECNPNIKLQNFSSYSTSGCLKECKAQHIKKQCGCVPFLLPGYGIECDLQKYFSC-VSPVLDHIEFKDLCTVGTH-NSSCPVSCEEIEYPATISYSSFPSQKALKYL--------SKKLNQSRKYIRENLVKIEINYSDLNYKITQQQKAVSVSELLADLGGQLGLFCGASLIT 459
The following BLAST results are available for this feature:
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