TCONS_00023857 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023857
Unique NameTCONS_00023857
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2766

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023857 ID=TCONS_00023857|Name=TCONS_00023857|organism=Clytia hemisphaerica|type=transcript|length=2766bp
AACAAAAGTCTTTGTTTCGTGATTCAGAGTGAACTTCTCTACATGTGCCA
CAGGCTTTAAGTTTTTATTGTCAATCGTGGGAGGATGTCCATAGCACttc
ataaaaataatatttcgattatttcaaaaaatgggCAAGGCTTCATAGTG
GCAATCAATCAAACATTAAAAATATTTGACCAAAAGGAATGCACTACTTT
ATTATCAAAAGAGAGTGAGCACATCAGATTAAATTCAATTGAGGATAGTA
CGAAGATAAATTATCTGATGAAAATTAGCATCCACTAAAAATTCGGcgta
caaacaaacaaaaaaatgaaatcttcCATCGTCCTGCTCTTCATTTATGT
CTTGTCATCGCTGGACAAAACGGAGAGTTTCTACAACAGAATGAAATCCA
CAAAGAAATTCAATATGAAAGAATTTTTGAAGACGATCTCACGTAAAGAA
AACACCCCAGAAGAAGACGCAGAATTGATGAAGATGAATGACCCTTCGCT
TTCCTTTTCCGGAACAAACGTTTGTCGGCGATCCGTACGTAGAATGGGGG
TAATGACGTATACAACCCGAGGACCGGTTCCGTACAAATATTGCTGTGGA
TGGCTGGTTTGGGGCCGCTATTGTGTGGACGAGGAATGGTGCACTGGTTA
CAGGATGGGTCCAGtaaagaaaacaagaaagaGAATGATACCTAAGCAAA
TTCTTTATTGTTGCTATGGTTACACCAAAGAAGATCCTGATTCTAAACAT
TGCACAAAAGCTATCTGCAAAAGTGAATGTCTGATCGGAAAATGCGTAGC
ACCGAACAGATGCCAATATAACCCGAAAGAAACCCGATTATCCGATTTTA
AGAAGATCATTAACGAAGATAAGTGCAGTTACAACATCTCTACGTCATCA
TCCGCAAACGTCACATTCCTACATTCCCACAATCCTTTGTTTGAAATGCA
GCACTGCACAGTCAATGTATATAtcgttgctaaggaaaataAAACATCCA
TAGCAACAGTCACTATACGAAAATTCAACATCAATTCAACTCTGAACTGC
GGTGAAAGCTTGGTTACCATGGCAACTAGCGATCAACACATCTTTCATTA
CTGCAGTAACATATTACCTGATGAAGAGCAATCTTTCCGAGTGAACGCCA
CGCGACTGACTTTTGAGAACACGCAAAGTAGATGGTCGACGAACGAAGAG
GTACTAATAAATATTGAAGTTGAAAACAAGGAGAATATGACAACAGGACA
GAACCGAGAATAACTTCAAAGCAATCTCAAACGCTATCTTGCATACAACG
TTGATTCGATACAATATTTAGTGGTGAAACAATGTTACAAAGACTACATA
ATAGCAATGGACGCATTTGCAATAGTGAAAGCATATGTCACACAGTAAGA
GACTATGGCGAAAGTAAAAGCTAACATTGGACTGTCACTGGTCGCTTTAG
ACGTTAGTGGAcgttaaaaagatgttaatacaACATTATGTGCCGTGCTT
CTTAGNTCACGCAACATTTAGTGGTGATATGCTACCAGTGGACGCGTTTG
CAATTTAGTGAGAGCATACGTCACTTGGCGAGTGAACTCTTTAAACGTTA
GTGGACGTTAGAAATACGTTAATACAACGTTAAGTGCCGTGCTTCTTATC
AATATTTACATTACAgtagtctccataactcgaacatggATCcgggtccc
ttcagttaacaatgcttataaaccttactccataattcgaaatttTGAAC
AAATCTGTGTTCCCCATGAGTGTCCGAGCTATGGAGACTCCGGAATAATA
TTTTTAGAGCTTAGCCCCCGGAGAGCCTTCAAGGACATTCTGTTTCTCCG
ACCAAAATTACCCTATGCATTGTAAGGATGTCATCTTGGAAGcaaaactt
ttattgaaaaCACAGTCATTCGAAGGTGAACCTGTGGAAGAATCATTACC
GCACGTATTtaacttaaggccggtctccactttcgcgtgaaatgagcgaa
aactttttaacgtttttgtatggaccatttcacagtcgcaacagatcatg
ggtaatcaggactgattgcgtcCGGATAACGGTTTCCCTTTGGTTGacgt
aaaaattttcaaaactttgaaccaatagtaagtcgtcattagggCGCAGC
agttctgattacccattacgctttgcgactgtgaggGCCTatggtcattg
gtcggttgaaaaatgaagcaattccattgggcaAATAAGACGTAAcggtt
taaaaaagttgaacttcgtgctgacgtcagcacgggttttgattttttat
gtaGGCAAAAAcgattgaaaaaaagttttctctcattttcgcgcgaaagt
ggagacacACACACTATGAGTCAGTTAGTCATTACCTGGACGTAAATATA
TATTGTATGTTATATCATGCAGTATTGAGAAACAACTGTCTGCTGTTCTT
TTGGCGATCATGAAATACAAAATTAGACAGTTGTGAATAGCTCTAAATCC
CATCACCCACGTCTCTCTACACATTTAATCAAGCAGAGGAAAATGTCAAC
ACAGCAGGCTTGTAAGCTACACTAGACTGTTTTCTTGGCGaatgttttat
aagaaaagcCGGATCGTAGCCGGAAAAGTTTTAGTGATAAAGTAACACAA
TATTTTAGGAAGAATTAAGATAAGACACATCAAACTCTGGACATATGGAA
GCAAAAAGCTAAACAaatttaacccccccccctgtagaTAGTGGGTAATC
ATTCCTGCTAACTGAG
Run BLAST on NCBI

protein sequence of TCONS_00023857-protein

>TCONS_00023857-protein ID=TCONS_00023857-protein|Name=TCONS_00023857-protein|organism=Clytia hemisphaerica|type=polypeptide|length=315bp
MKSSIVLLFIYVLSSLDKTESFYNRMKSTKKFNMKEFLKTISRKENTPEE
DAELMKMNDPSLSFSGTNVCRRSVRRMGVMTYTTRGPVPYKYCCGWLVWG
RYCVDEEWCTGYRMGPVKKTRKRMIPKQILYCCYGYTKEDPDSKHCTKAI
CKSECLIGKCVAPNRCQYNPKETRLSDFKKIINEDKCSYNISTSSSANVT
FLHSHNPLFEMQHCTVNVYIVAKENKTSIATVTIRKFNINSTLNCGESLV
TMATSDQHIFHYCSNILPDEEQSFRVNATRLTFENTQSRWSTNEEVLINI
EVENKENMTTGQNRE
Run BLAST on NCBI

transcript from alignment at sc0000463:223927..231447-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023857 ID=TCONS_00023857|Name=TCONS_00023857|organism=Clytia hemisphaerica|type=transcript|length=7521bp|location=Sequence derived from alignment at sc0000463:223927..231447- (Clytia hemisphaerica)
AACAAAAGTCTTTGTTTCGTGATTCAGAGTGAACTTCTCTACATGTGCCA CAGGCTTTAAGTTTTTATTGTCAATCGTGGGAGGATGTCCATAGCACTTC ATAAAAATAATATTTCGATTATTTCAAAAAATGGGCAAGGCTTCATAGTG GCAATCAATCAAACATTAAAAATATTTGACCAAAAGGAATGCACTACTTT ATTATCAAAAGAGAGTGAGCACATCAGGTAAGCATTGCTGCAGTTTTTTG TTATTATTCTTTGTAGTCGAAAGTTATGGAAAGAAAATTGATAAAATTGA TATTAGAAGTGAGGGAACGTATTAATGTGTCAAGCCCGTTTAAAGGTATT TTCACAAGCATCCTGGCCAACAAAAGACTAAACTAATTTTCTAGACGAAT TTGGCTGAACTAGGTCCAGTGGAACAGTGGATAAATTTATAGAAGAATTG GACCTTTCTTACTAGAAATATCATTTGAAAGATTTGAATGAAGATTGACT TTTGTAGGGCTAAAAACTACGAGCTCCTCTCTATCACCACCCTGCTATCC AATCAAAAGTTAAACTGATATCTTTGCAATAACGATGATTTAGCTTGGAA ACCACTCTCGAGAGAACAAATTTGTCGTTCCCTATGAAATTATTTGTCGT TCTTTTTTGATGTTCCGAAGCAAAATTCAGTGGTGCCCTTAATACTTTTT TCATAGCTTTAACACTTGAATAATGATAATCGACCGCCGGAGGCGGTTTC TTTCATAGTGGTACGCTAATCTCGTTTTGCCTTGGCTCATTACTTTGTCT ACCATTTACTTTGGGTTTTTTTAACTAGATTACCCAGGCGTTTCTCTTTT TTTCCCTGAATGTCTTCTATTCGTAATCGAATAATCGAGACGTGAAAAAT GACTATATTGTAATCTGTTTTCAATGAATAATCTAAAATGTACTGGAGAT GACATGTATGCGTTAACAATGTGCGCGCGCTCTTTCTCGAGCGTGCGTGA TGCGTGAAGGAAGGCGGTCGTTTCAGTGTGGTTTAGATCCACACTGTGAC CTAGTAATTGTATTTCATTTCATAAGATATTTAAGATTAAATTCAATTGA GGATAGTACGAAGATAAATTATCTGATGAAAATTAGCATCCACTAAAAAT TCGGCGTACAAACAAACAAAAAAATGAAATCTTCCATCGTCCTGCTCTTC ATTTATGTCTTGTCATCGCTGGACAAAACGGAGAGTTTCTACAACAGAAT GAAATCCACAAAGAAATTCAATATGAAAGAATTTTTGAAGACGATCTCAC GTAAAGAAAACACCCCAGAAGAAGACGCAGAATTGATGAAGATGAATGAC CCTTCGCTTTCCTTTTCCGGGTAAGCTCTAGAGTATGTTCCAAAAAAATT TGGCAGTCCATACTTTTTTAAACATTAGGGACTCTATGTATTTGTTTTGT TTTGAACAATGGAGACAGTTAGCTTCTGATTTGTATCTATAAGTCATGAT TGAGTGTAAAAGACGGTAAATCAGTGCTTGTATCGTCCTCGGTTTTGCGG TCAGAACTGCGTGTTGTTCCAAACCGCTTCAGTCACTGTGCCGTCTTGAA AATACAAAAATTTGCTATTCTTCTTAAGGGGAAGAGTATAGCTTAAGATA ATGCCTCGTTGGAAAAATATTTTGAGCGGCTTAATATTAGATTTTTAGAA GTTTCTAAACAATTATAAATGAAGAAAAAAATGGCTAGGTCAAAAGCTTT TATTCGAAATTCTGCCTTGAGACAAAAACGGTAGAAAATGGTCTGTCTAT ACGATGCCTTCTTTTGGCGTCAATGCAACAAACTCTCTCGAAATTTTTAA ATATAAATATTGGAAATTTCTACTACTGTTTCTGTTTCTGTTTCTGTTTT CCAAAGTACTGTGATCACAATTGTCAACTCTAAGGTCCTGAATAAAACGG GAGGTGTCCGAGTTTTTTTCAAAATATAAACGGGGGACCTAAATACCGGG GGCTAACTAAAACGCCGGGAGTTGGAAACTACCTCTAACCCCCCCCCCTC GGTAATTATAGACTAAAACTATCCTATTTAGAGCAATTCAGCTTTTGATA GTTGAAAATATTTTCAAAAATCGATAAACAGGGGGTAACCTTTATTCGGG ACCTTAGAGTGTACAAAAGTAGGGCTATGTTGAAAACCCATCTTTTTCCG TCATGTAGAACAAACGTTTGTCGGCGATCCGTACGTAGAATGGGGGTAAT GACGTATACAACCCGAGGACCGGTTCCGTACAAATATTGCTGTGGATGGC TGGTTTGGGGCCGCTATTGTGTGGACGAGGAATGGTGCACTGGTTACAGG TGGGTGTTGCGGGAATAAACAGACTATGAATTAGCAAGGCTCTTCCCAGC TGGCACACAGTGTTGTTTCAACACTATCTAACGCTATATGGACATTAGAT AAACGTTGAAGCAACGCTTTGGTCCAGCTGGGTTCATAACTGAACACTCG TTTAGCTAGGATAGCTCGAAGGTCGCCGTAGTCCTTTCCTATCCCTGGAA GCCTAAAATTGCAGTAAGGATCGAATGGTGCGGGAAATATACAAGTATAA GCTAAAATATTGGAAATTTTGAAACTTTAAAATATCAACATCGAGAATTC TCGTTTACTCTGATTGAAACAGTCCTGTACAGTCCAATTTTGATTGCAAT TATTTTTAGACAGACCGTAAGGATCGTTTATCTAACGATTCAACGTTTAT CGAACGTTCACAACGTCCATATAACGTTAGATGAACGTTGTACCAATGTT GTGTGCCAGCTGCGTAGCCTTCCCAGAGATCCTTGAGATTGTTTGAATTT CATGTTTATTATTTCCAACAGGATGGGTCCAGTAAAGAAAACAAGAAAGA GAATGATACCTAAGCAAATTCTTTATTGTTGCTATGGTTACACCAAAGAA GATCCTGATTCTAAACATTGCACAAAAGGTGACTTGCTTATTATATATTC TGCTGGCGGATTCAAAACAATAGAGCAACTACGTCGGAAACATGCGAAGG AGTGCAACGCTCGTTAAAAGACAATGGAATTTCTTTTACAAATCCCTTCC TCTGATAAGTTCGACATTGTCTAAATCCGCCTATGATTCTGCTAGCCTAT AAATTTCAGAGCTGTTCTTTTTACAATCAAAAGCTTTAAGCTTTTGAACT CAATTACCTTAAGGGAACTTATTTTTTTGGCGGAAACTAATTTTAGCGAG CGGCGAAAATCTTTAAAAAATTTAATTTTGGCGGGAACTTATTTTGGCGA TTAGTGAATTTTTTTAATTTTGGCGGGAACTAATTTTGGCGAATGACAGC GTAAATCTGTTCTATTTTGCCTTATTTTGAGCAATTTTCATGAATTTCAA GGGTTATTTAGGCAAGGAAACAAAAAATTTAATTTTGGCGGGAACTTATT TTGGGGAGTGAGCAAAATATTTAATTTTGACGGGAACTAATTTTGGCGAA TTTTGCCTAAATTCGCCAAATTCGCCAAAATTAGTTCTCGCCAAAATAAG TTCCCTTAAGGTATTTTTATTTTTGGACATATACTCCCTTAATCTCAACC TAACTCGTCCATTCTGCGCATAACACGCTCTGCTCTAAGGGATATTGCGA TTGTGGCGGGCATTCTTACGGAGTCATGACCTGATCATAGAGTTTATACG TACCAATGTGGAGTAATCAGAGTCTACCAAACGAACACAGTTATTCTAAT ACTAAATGTGTTTCTCTTTCGAGGAGAAAGTTTTAAGAGATTTGGTTGCT GGTCAGTATAACCTTTGTAAGGCTTAACACACTTGCTGGGACACACTGGG CGAAATCTGAAACATCATATTTTCAAAATATTTCCAACTTTTAGAAATAT GATATTTCAAAAAATTAGAAATATCTTGAATTGAAAATATGATGTTTCAA TGAATTTCAGAATTGGAAATATCATGAAATATGATATTTCCACAACTTTG GAAATATAGAAAAGTCATATTTCCATATTTACAAAAGTATATGAAATATC ATATTTTCTCTTATTTCGCCCAGTGACAATGTCCAACCTCGTACCGGGGG CTCTGCATTTTGATTTTACTGGTCAATCATGTGCGCTATCAGTAAAAAAT AAAAAAGTGAATTAAGGGCTACTGACCATAGTGAATTTTTTATATTTGCC ATTTACAAAATATAGATTTCTGCCTGATGTAGCCAAAAAACTATGACATG TTATACATTTTCTGTTAGGCCAACTATTCCTGAATCTGAAAATTAAAAAA TCACAATGAAAAAATTTGATGAAGGAGAAAAGGAAAACTTTTGCGAAGAA GAGTATTTCAACCTTAAAGAGCTTATCTTCGGCGAAGAAAAAACATTTTG AAAGATTTTTGCGTTAGAAAGTGTATCTTTAACCAAACTAAAAAAAGATT TTCGGAAATTTTTGTTAAAGCTTCTTCGTCTCAAAATCTTGAAAATAGCG GTTTTTGACCAATTCTTCACCCCAAATTTTCGTACAAAAAGAGTCATACC TTTTGATACATCAATTTAGAAAATTTTTCCGAAAAATTTAAAAGAGTTCA ATTCTTTGCCGACAATTTAAAAAAAACTCGAAAGAAAAACGTTAATTACT CATTAAAACTTAGCATTTTTTGTATAAGAGGGTAATATAACATTTGATTA ACGTCTTTAAAAGTTCATAACGTCATTTTTGTAACTAATTTCTTAAAAAT TACTCTTGACAGGATAAATTACCAAACAACTTGTAAGGGCAGTTTTTTGT TCAAAGTGTCAAGGAACCCAAAACAAAGGTTTTATCTTCAAATCCCTTAA CAAATTTTTTGACTATGGCCAGAGCCCTTAAGAGACTAAGTTTGGCAGTG TCGTTTTATGTAGAAGGTACCCCCTGTCGTTATTTCCGAAATTTAGTTGC ACAAAAGGAAGTCGAAACTTTTATCATGTTATTATTAAATCGTTTCCTTA TTCAACCAACAGCTATCTGCAAAAGTGAATGTCTGATCGGAAAATGCGTA GCACCGAACAGATGCCAATATAACCCGAAAGAAACCCGATTATCCGATTT TAAGAAGATCATTAACGAAGGTATTTTGAAAAGTTGTATTTACAATATTC TAAAGCCGTGAAACAATTAGTTATTTTCGGGTGAGAGATTTTTACTCCTA AATCTGCATGATCCCAATCTTCATGAACCTCTATAACTCGTTTAAACTCC TCTATAAACTAAGTTTCTTTAACTCGAACAAGTTATTTGGCCCTTTTAAC TAGCGAAACTTTAACATAATCAGTATCAATAACTCGAAATTTTCACACAA CTTCTCCTTGATTTATTATAAATTTCATCTTCAAAAAACAAAACCTAAAT TTCCCATTCCTAGTAGGAAGAGCCCGTTAATGATGACGTCACTTTAGGCC AGTCAACCATAAACATTGATAAACTCAACAAATTCGATGCCATGGTTAAT GGTATTCTTCGAGTCTCTCGCCGGGTCTGTTGGTTTCCCAGCGGTACTGG TGAGGCTTACTGAATAACACCTTCCAAGCAACTGTATTAACTTAATAAAT ACTCAATCATTTATTTTTCACAGATAAGTGCAGTTACAACATCTCTACGT CATCATCCGCAAACGTCACATTCCTACATTCCCACAATCCTTTGTTTGAA ATGCAGCACTGCACAGTCAATGTATATATCGTTGCTAAGGAAAATAAAAC ATCCATAGCAACAGTCACTATACGAAAATTCAACATCAATTCAACTCTGA ACTGCGGTGAAAGCTTGGTTACCATGGCAACTAGCGATCAACACATCTTT CATTACTGCAGTAACATATTACCTGATGAAGAGCAATCTTTCCGAGTGAA CGCCACGCGACTGACTTTTGAGAACACGCAAAGTAGATGGTCGACGAACG AAGAGGTACTAATAAATATTGAAGTTGAAAACAAGGAGAATATGACAACA GGACAGAACCGAGAATAACTTCAAAGCAATCTCAAACGCTATCTTGCATA CAACGTTGATTCGATACAATATTTAGTGGTGAAACAATGTTACAAAGACT ACATAATAGCAATGGACGCATTTGCAATAGTGAAAGCATATGTCACACAG TAAGAGACTATGGCGAAAGTAAAAGCTAACATTGGACTGTCACTGGTCGC TTTAGACGTTAGTGGACGTTAAAAAGATGTTAATACAACATTATGTGCCG TGCTTCTTAGNTCACGCAACATTTAGTGGTGATATGCTACCAGTGGACGC GTTTGCAATTTAGTGAGAGCATACGTCACTTGGCGAGTGAACTCTTTAAA CGTTAGTGGACGTTAGAAATACGTTAATACAACGTTAAGTGCCGTGCTTC TTATCAATATTTACATTACAGTAGTCTCCATAACTCGAACATGGATCCGG GTCCCTTCAGTTAACAATGCTTATAAACCTTACTCCATAATTCGAAATTT TGAACAAATCTGTGTTCCCCATGAGTGTCCGAGCTATGGAGACTCCGGAA TAATATTTTTAGAGCTTAGCCCCCGGAGAGCCTTCAAGGACATTCTGTTT CTCCGACCAAAATTACCCTATGCATTGTAAGGATGTCATCTTGGAAGCAA AACTTTTATTGAAAACACAGTCATTCGAAGGTGAACCTGTGGAAGAATCA TTACCGCACGTATTTAACTTAAGGCCGGTCTCCACTTTCGCGTGAAATGA GCGAAAACTTTTTAACGTTTTTGTATGGACCATTTCACAGTCGCAACAGA TCATGGGTAATCAGGACTGATTGCGTCCGGATAACGGTTTCCCTTTGGTT GACGTAAAAATTTTCAAAACTTTGAACCAATAGTAAGTCGTCATTAGGGC GCAGCAGTTCTGATTACCCATTACGCTTTGCGACTGTGAGGGCCTATGGT CATTGGTCGGTTGAAAAATGAAGCAATTCCATTGGGCAAATAAGACGTAA CGGTTTAAAAAAGTTGAACTTCGTGCTGACGTCAGCACGGGTTTTGATTT TTTATGTAGGCAAAAACGATTGAAAAAAAGTTTTCTCTCATTTTCGCGCG AAAGTGGAGACACACACACTATGAGTCAGTTAGTCATTACCTGGACGTAA ATATATATTGTATGTTATATCATGCAGTATTGAGAAACAACTGTCTGCTG TTCTTTTGGCGATCATGAAATACAAAATTAGACAGTTGTGAATAGCTCTA AATCCCATCACCCACGTCTCTCTACACATTTAATCAAGCAGAGGAAAATG TCAACACAGCAGGCTTGTAAGCTACACTAGACTGTTTTCTTGGCGAATGT TTTATAAGAAAAGCCGGATCGTAGCCGGAAAAGTTTTAGTGATAAAGTAA CACAATATTTTAGGAAGAATTAAGATAAGACACATCAAACTCTGGACATA TGGAAGCAAAAAGCTAAACAAATTTAACCCCCCCCCCTGTAGATAGTGGG TAATCATTCCTGCTAACTGAG

Coding sequence (CDS) from alignment at sc0000463:223927..231447-

>TCONS_00023857 ID=TCONS_00023857|Name=TCONS_00023857|organism=Clytia hemisphaerica|type=CDS|length=4740bp|location=Sequence derived from alignment at sc0000463:223927..231447- (Clytia hemisphaerica)
ATAAGTGCAGTTACAACATCTCTACGTCATCATCCGCAAACGTCACATTC
CTACATTCCCACAATCCTTTGTTTGAAATGCAGCACTGCACAGTCAATGT
ATATATCGTTGCTAAGGAAAATAAAACATCCATAGCAACAGTCACTATAC
GAAAATTCAACATCAATTCAACTCTGAACTGCGGTGAAAGCTTGGTTACC
ATGGCAACTAGCGATCAACACATCTTTCATTACTGCAGTAACATATTACC
TGATGAAGAGCAATCTTTCCGAGTGAACGCCACGCGACTGACTTTTGAGA
ACACGCAAAGTAGATGGTCGACGAACGAAGAGGTACTAATAAATATTGAA
GTTGAAAACAAGGAGAATATGACAACAGGACAGAACCGAGAATAACTATC
TGCAAAAGTGAATGTCTGATCGGAAAATGCGTAGCACCGAACAGATGCCA
ATATAACCCGAAAGAAACCCGATTATCCGATTTTAAGAAGATCATTAACG
AAGGATGGGTCCAGTAAAGAAAACAAGAAAGAGAATGATACCTAAGCAAA
TTCTTTATTGTTGCTATGGTTACACCAAAGAAGATCCTGATTCTAAACAT
TGCACAAAAGAACAAACGTTTGTCGGCGATCCGTACGTAGAATGGGGGTA
ATGACGTATACAACCCGAGGACCGGTTCCGTACAAATATTGCTGTGGATG
GCTGGTTTGGGGCCGCTATTGTGTGGACGAGGAATGGTGCACTGGTTACA
GATGAAATCTTCCATCGTCCTGCTCTTCATTTATGTCTTGTCATCGCTGG
ACAAAACGGAGAGTTTCTACAACAGAATGAAATCCACAAAGAAATTCAAT
ATGAAAGAATTTTTGAAGACGATCTCACGTAAAGAAAACACCCCAGAAGA
AGACGCAGAATTGATGAAGATGAATGACCCTTCGCTTTCCTTTTCCGGAT
AAGTGCAGTTACAACATCTCTACGTCATCATCCGCAAACGTCACATTCCT
ACATTCCCACAATCCTTTGTTTGAAATGCAGCACTGCACAGTCAATGTAT
ATATCGTTGCTAAGGAAAATAAAACATCCATAGCAACAGTCACTATACGA
AAATTCAACATCAATTCAACTCTGAACTGCGGTGAAAGCTTGGTTACCAT
GGCAACTAGCGATCAACACATCTTTCATTACTGCAGTAACATATTACCTG
ATGAAGAGCAATCTTTCCGAGTGAACGCCACGCGACTGACTTTTGAGAAC
ACGCAAAGTAGATGGTCGACGAACGAAGAGGTACTAATAAATATTGAAGT
TGAAAACAAGGAGAATATGACAACAGGACAGAACCGAGAATAACTATCTG
CAAAAGTGAATGTCTGATCGGAAAATGCGTAGCACCGAACAGATGCCAAT
ATAACCCGAAAGAAACCCGATTATCCGATTTTAAGAAGATCATTAACGAA
GGATGGGTCCAGTAAAGAAAACAAGAAAGAGAATGATACCTAAGCAAATT
CTTTATTGTTGCTATGGTTACACCAAAGAAGATCCTGATTCTAAACATTG
CACAAAAGAACAAACGTTTGTCGGCGATCCGTACGTAGAATGGGGGTAAT
GACGTATACAACCCGAGGACCGGTTCCGTACAAATATTGCTGTGGATGGC
TGGTTTGGGGCCGCTATTGTGTGGACGAGGAATGGTGCACTGGTTACAGA
TGAAATCTTCCATCGTCCTGCTCTTCATTTATGTCTTGTCATCGCTGGAC
AAAACGGAGAGTTTCTACAACAGAATGAAATCCACAAAGAAATTCAATAT
GAAAGAATTTTTGAAGACGATCTCACGTAAAGAAAACACCCCAGAAGAAG
ACGCAGAATTGATGAAGATGAATGACCCTTCGCTTTCCTTTTCCGGATAA
GTGCAGTTACAACATCTCTACGTCATCATCCGCAAACGTCACATTCCTAC
ATTCCCACAATCCTTTGTTTGAAATGCAGCACTGCACAGTCAATGTATAT
ATCGTTGCTAAGGAAAATAAAACATCCATAGCAACAGTCACTATACGAAA
ATTCAACATCAATTCAACTCTGAACTGCGGTGAAAGCTTGGTTACCATGG
CAACTAGCGATCAACACATCTTTCATTACTGCAGTAACATATTACCTGAT
GAAGAGCAATCTTTCCGAGTGAACGCCACGCGACTGACTTTTGAGAACAC
GCAAAGTAGATGGTCGACGAACGAAGAGGTACTAATAAATATTGAAGTTG
AAAACAAGGAGAATATGACAACAGGACAGAACCGAGAATAACTATCTGCA
AAAGTGAATGTCTGATCGGAAAATGCGTAGCACCGAACAGATGCCAATAT
AACCCGAAAGAAACCCGATTATCCGATTTTAAGAAGATCATTAACGAAGG
ATGGGTCCAGTAAAGAAAACAAGAAAGAGAATGATACCTAAGCAAATTCT
TTATTGTTGCTATGGTTACACCAAAGAAGATCCTGATTCTAAACATTGCA
CAAAAGAACAAACGTTTGTCGGCGATCCGTACGTAGAATGGGGGTAATGA
CGTATACAACCCGAGGACCGGTTCCGTACAAATATTGCTGTGGATGGCTG
GTTTGGGGCCGCTATTGTGTGGACGAGGAATGGTGCACTGGTTACAGATG
AAATCTTCCATCGTCCTGCTCTTCATTTATGTCTTGTCATCGCTGGACAA
AACGGAGAGTTTCTACAACAGAATGAAATCCACAAAGAAATTCAATATGA
AAGAATTTTTGAAGACGATCTCACGTAAAGAAAACACCCCAGAAGAAGAC
GCAGAATTGATGAAGATGAATGACCCTTCGCTTTCCTTTTCCGGATAAGT
GCAGTTACAACATCTCTACGTCATCATCCGCAAACGTCACATTCCTACAT
TCCCACAATCCTTTGTTTGAAATGCAGCACTGCACAGTCAATGTATATAT
CGTTGCTAAGGAAAATAAAACATCCATAGCAACAGTCACTATACGAAAAT
TCAACATCAATTCAACTCTGAACTGCGGTGAAAGCTTGGTTACCATGGCA
ACTAGCGATCAACACATCTTTCATTACTGCAGTAACATATTACCTGATGA
AGAGCAATCTTTCCGAGTGAACGCCACGCGACTGACTTTTGAGAACACGC
AAAGTAGATGGTCGACGAACGAAGAGGTACTAATAAATATTGAAGTTGAA
AACAAGGAGAATATGACAACAGGACAGAACCGAGAATAACTATCTGCAAA
AGTGAATGTCTGATCGGAAAATGCGTAGCACCGAACAGATGCCAATATAA
CCCGAAAGAAACCCGATTATCCGATTTTAAGAAGATCATTAACGAAGGAT
GGGTCCAGTAAAGAAAACAAGAAAGAGAATGATACCTAAGCAAATTCTTT
ATTGTTGCTATGGTTACACCAAAGAAGATCCTGATTCTAAACATTGCACA
AAAGAACAAACGTTTGTCGGCGATCCGTACGTAGAATGGGGGTAATGACG
TATACAACCCGAGGACCGGTTCCGTACAAATATTGCTGTGGATGGCTGGT
TTGGGGCCGCTATTGTGTGGACGAGGAATGGTGCACTGGTTACAGATGAA
ATCTTCCATCGTCCTGCTCTTCATTTATGTCTTGTCATCGCTGGACAAAA
CGGAGAGTTTCTACAACAGAATGAAATCCACAAAGAAATTCAATATGAAA
GAATTTTTGAAGACGATCTCACGTAAAGAAAACACCCCAGAAGAAGACGC
AGAATTGATGAAGATGAATGACCCTTCGCTTTCCTTTTCCGGATAAGTGC
AGTTACAACATCTCTACGTCATCATCCGCAAACGTCACATTCCTACATTC
CCACAATCCTTTGTTTGAAATGCAGCACTGCACAGTCAATGTATATATCG
TTGCTAAGGAAAATAAAACATCCATAGCAACAGTCACTATACGAAAATTC
AACATCAATTCAACTCTGAACTGCGGTGAAAGCTTGGTTACCATGGCAAC
TAGCGATCAACACATCTTTCATTACTGCAGTAACATATTACCTGATGAAG
AGCAATCTTTCCGAGTGAACGCCACGCGACTGACTTTTGAGAACACGCAA
AGTAGATGGTCGACGAACGAAGAGGTACTAATAAATATTGAAGTTGAAAA
CAAGGAGAATATGACAACAGGACAGAACCGAGAATAACTATCTGCAAAAG
TGAATGTCTGATCGGAAAATGCGTAGCACCGAACAGATGCCAATATAACC
CGAAAGAAACCCGATTATCCGATTTTAAGAAGATCATTAACGAAGGATGG
GTCCAGTAAAGAAAACAAGAAAGAGAATGATACCTAAGCAAATTCTTTAT
TGTTGCTATGGTTACACCAAAGAAGATCCTGATTCTAAACATTGCACAAA
AGAACAAACGTTTGTCGGCGATCCGTACGTAGAATGGGGGTAATGACGTA
TACAACCCGAGGACCGGTTCCGTACAAATATTGCTGTGGATGGCTGGTTT
GGGGCCGCTATTGTGTGGACGAGGAATGGTGCACTGGTTACAGATGAAAT
CTTCCATCGTCCTGCTCTTCATTTATGTCTTGTCATCGCTGGACAAAACG
GAGAGTTTCTACAACAGAATGAAATCCACAAAGAAATTCAATATGAAAGA
ATTTTTGAAGACGATCTCACGTAAAGAAAACACCCCAGAAGAAGACGCAG
AATTGATGAAGATGAATGACCCTTCGCTTTCCTTTTCCGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013405XLOC_013405Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023857-exon-sc0000463-1575043694:231221..231447TCONS_00023857-exon-sc0000463-1575043694:231221..231447Clytia hemisphaericaexon
TCONS_00023857-exon-sc0000463-1575043694:230078..230362TCONS_00023857-exon-sc0000463-1575043694:230078..230362Clytia hemisphaericaexon
TCONS_00023857-exon-sc0000463-1575043694:229099..229239TCONS_00023857-exon-sc0000463-1575043694:229099..229239Clytia hemisphaericaexon
TCONS_00023857-exon-sc0000463-1575043694:228470..228576TCONS_00023857-exon-sc0000463-1575043694:228470..228576Clytia hemisphaericaexon
TCONS_00023857-exon-sc0000463-1575043694:226328..226435TCONS_00023857-exon-sc0000463-1575043694:226328..226435Clytia hemisphaericaexon
TCONS_00023857-exon-sc0000463-1575043694:223927..225824TCONS_00023857-exon-sc0000463-1575043694:223927..225824Clytia hemisphaericaexon
TCONS_00023857-exon-sc0000463-1510915933:231221..231447TCONS_00023857-exon-sc0000463-1510915933:231221..231447Clytia hemisphaericaexon
TCONS_00023857-exon-sc0000463-1510915933:230078..230362TCONS_00023857-exon-sc0000463-1510915933:230078..230362Clytia hemisphaericaexon
TCONS_00023857-exon-sc0000463-1510915933:229099..229239TCONS_00023857-exon-sc0000463-1510915933:229099..229239Clytia hemisphaericaexon
TCONS_00023857-exon-sc0000463-1510915933:228470..228576TCONS_00023857-exon-sc0000463-1510915933:228470..228576Clytia hemisphaericaexon
TCONS_00023857-exon-sc0000463-1510915933:226328..226435TCONS_00023857-exon-sc0000463-1510915933:226328..226435Clytia hemisphaericaexon
TCONS_00023857-exon-sc0000463-1510915933:223927..225824TCONS_00023857-exon-sc0000463-1510915933:223927..225824Clytia hemisphaericaexon
TCONS_00023857-exon-sc0000463-1491911889:231221..231447TCONS_00023857-exon-sc0000463-1491911889:231221..231447Clytia hemisphaericaexon
TCONS_00023857-exon-sc0000463-1491911889:230078..230362TCONS_00023857-exon-sc0000463-1491911889:230078..230362Clytia hemisphaericaexon
TCONS_00023857-exon-sc0000463-1491911889:229099..229239TCONS_00023857-exon-sc0000463-1491911889:229099..229239Clytia hemisphaericaexon
TCONS_00023857-exon-sc0000463-1491911889:228470..228576TCONS_00023857-exon-sc0000463-1491911889:228470..228576Clytia hemisphaericaexon
TCONS_00023857-exon-sc0000463-1491911889:226328..226435TCONS_00023857-exon-sc0000463-1491911889:226328..226435Clytia hemisphaericaexon
TCONS_00023857-exon-sc0000463-1491911889:223927..225824TCONS_00023857-exon-sc0000463-1491911889:223927..225824Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023857-proteinTCONS_00023857-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000463supercontigsc0000463:223927..231447 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0138814 0.0270668 0.0157157 0.0307458 0.0748435 0.0591582 3.10073 2.81763 2.87735 4.26955 3.96407 2.27807 6.62868 7.41313 11.6256 13.5256 0.437649 0.953619 0.206725 0.17012 0.954742 0.864879 0.573379 0.463148 0.655455 1.26338 0.423176 0.705264 6.56589 6.86411
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00023857 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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