|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023860 ID=TCONS_00023860|Name=TCONS_00023860|organism=Clytia hemisphaerica|type=transcript|length=355bp
TTTTGTCGTTATCTCCACCATCCAAACAGTTTTGGTCCGCGTTGATGACC
ACTATCAAGTTGACTTTTATCTCCGTAAGTTTTGACAATTCATTTCTAAA
GATTCCCAAAGAtggacaaaatttcttccacgTTGTTTGAAGCTGTATAG
AGATGTACGGATCGCTCGCTGTGACTTCTTGGATACCTAACAAAAGGAAG
AAACTGACAAAAGTTCTCATCCAATCCATTTTTATTCCACGAAAATCGTT
GAAAtttcaaaccaaacaaaaatcGCACTTCATTTAGTTGTAAATTTTTC
TTGTTAACAAGTAAGTCATCATGCTATAAAAACTTTTCACGTCACACCAC
TTAAG Run BLAST on NCBI transcript from alignment at sc0000463:240123..241158- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023860 ID=TCONS_00023860|Name=TCONS_00023860|organism=Clytia hemisphaerica|type=transcript|length=1036bp|location=Sequence derived from alignment at sc0000463:240123..241158- (Clytia hemisphaerica)
TTTTGTCGTTATCTCCACCATCCAAACAGTTTTGGTCCGCGTTGATGACC
ACTATCAAGTTGACTTTTATCTCCGTAAGTTTTGACAATTCATTTCTAAA
GATTCCCAAAGATGGACAAAATTTCTTCCACGTTGTTTGAAGCTGTATAG
AGATGTACGGATCGCTCGCTGTGACTTCTTGGATGATACCTGGACACAGG
AAGATTGGATGATGAAAGTTTGTATATAGAAGAATATTGAGTATAAAGGG
GTAAAGGAAGAAAAGTCTTGATGATCAGAGTATTGACCTCGAGAATTAGT
CGATATATATATAGAAAACTTGGAGACACCACCTGTAAACTTTGAGACTT
CGTTTCGTTATCCAAGAAATCTTACGACTTCATAACAAAAACTCCACATT
CGCGGAATAAATCGACTGAAGATATATCGTTATCAACAGATCTTTGATAA
ACCTGATTGCGATGAATCAAATACGTTATAAGGAGGGTGTGACCCGCAAC
AGCAAATTCAAAAGTGGAGGAATCCGTAAAGTGCCTAAAACGACAAGCTC
TAGTTTAAACGGCAAACTTTCTGTGCTGCCTTTACTAGTTGTTAGAGTAG
GCAAAAGTGGGCAGAAAGTTGGCAGTTAAGATCTTAGCTTGATAAGGTTA
AAAGAAGTCTTCGCATCGACTTTTGAACTTTCTACTGACTTCAATATACA
ATTCAAATAGGCAGAGCGAAAAGGGGGCCGTTTAGGGGGCCGTTTAAACC
AGAGATAAATATGGCGGTATCTTGATATTGCGGTAGTTTGAGCCTGGTCG
GAATCAGACTACGCTCATCAAGGTTTAGGTCAGATTTGATTTCCTACAAT
TTCAAACACCAACATACCTAACAAAAGGAAGAAACTGACAAAAGTTCTCA
TCCAATCCATTTTTATTCCACGAAAATCGTTGAAATTTCAAACCAAACAA
AAATCGCACTTCATTTAGTTGTAAATTTTTCTTGTTAACAAGTAAGTCAT
CATGCTATAAAAACTTTTCACGTCACACCACTTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00023860-exon-sc0000463-1575043694:240977..241158 | TCONS_00023860-exon-sc0000463-1575043694:240977..241158 | Clytia hemisphaerica | exon |
| TCONS_00023860-exon-sc0000463-1575043694:240123..240295 | TCONS_00023860-exon-sc0000463-1575043694:240123..240295 | Clytia hemisphaerica | exon |
| TCONS_00023860-exon-sc0000463-1510915933:240977..241158 | TCONS_00023860-exon-sc0000463-1510915933:240977..241158 | Clytia hemisphaerica | exon |
| TCONS_00023860-exon-sc0000463-1510915933:240123..240295 | TCONS_00023860-exon-sc0000463-1510915933:240123..240295 | Clytia hemisphaerica | exon |
| TCONS_00023860-exon-sc0000463-1491911889:240977..241158 | TCONS_00023860-exon-sc0000463-1491911889:240977..241158 | Clytia hemisphaerica | exon |
| TCONS_00023860-exon-sc0000463-1491911889:240123..240295 | TCONS_00023860-exon-sc0000463-1491911889:240123..240295 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000463 | supercontig | sc0000463:240123..241158 - |
Blast
The following BLAST results are available for this feature:
|
