TCONS_00023867 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023867
Unique NameTCONS_00023867
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2900

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023867 ID=TCONS_00023867|Name=TCONS_00023867|organism=Clytia hemisphaerica|type=transcript|length=2900bp
ctttggtattttcgttgcgtcacagcaaaaggttttttttattttagttt
gtatctttgaaagaccacggcggatttaggcagggctgtcggatttagga
ccactcacggtacctaCAATGAACAAAGATGGTATGTatgcacaaaaaaa
tattttcgaccgatcgaccgaccgacccactttGTAAAGTcgacataatt
attcaacatggctgcctctttaaaaaaaggtataTTTTTAAAGATCCGCC
TTATCAGACCGGGCCCTATCCGGTAGTTTCCTACCcctagatagggaaat
cacagcgcttaccagacattgtactctgtgctcgcgacacatcagagccA
TGCTTTATCGATGATGATACTCGTAGTACTAGAGAACCTTGCGTTCTCGC
AGGGTAGCGAACATATGAGTACCTTCACCACACCACATCTCACCACATTC
AATGTCCAGCATATCACCctatactcttgtatcagagtgatggtacccta
ttcccctcacatggtatgggtcagtatgggttgacccgggcaaaggagca
ttcacttgccaagtgcgAAGTAAGTGGCAAGCACCGAGTGGGAATCAATC
CCTGACCTCCAGCACGAAAGTCAAGAACGATGATAACTACACTACTGCAC
CCTTTTGATCTAGTTTAATTATTTAATTTAGATCTAAGACGGGAAAATCA
TCTCAGACCAAGTTAAACCTCTAAAAGacataaaaatttgataccttttc
actttacacgtttttttcatcCGCCATGTTGATCTTTCCCGCTCAAAATC
ATTCCACTTTTAGAATATTCGACCTGGGCTAGCACCTATACTCGAATTAA
GATAAGCCTTGAATCTGCTAGTTCAATGATTTTCGTATGATTGTTGATGG
CTTTCGGGCAAGTCTGCAAATTGAACAAAGGAGGAGTTATGGAACGATCT
CCTTGCCTTGCGCAACACTCCTCTTACTGTCTTAACAACATTACAAGTGA
TTTGCCTTTGCAGGGTGCAGGTTACAAAAACGGTTGGCAGAAGATTTCGT
GACTGGGCCACTAAAATCAGGCAATATGGTGTTTGAGGGGCTTGTTGGTT
ATTATGATTACATCTTGCAAACAGGCGATGTGCGAACAGCAACAATGCCA
TTTATCCAATCACCAAAATATGTTGTCTGTGCTGTCATTCTGTATTTGCT
GATGGTTATTTTTGGTCCCAGAATCATGGAAAAACGCCAACCGTTTCAAC
TACGCAATGTACTCATTGGATACAACTGTTTCTCTGTTGTATTCTCAGTT
TGGATGATGTGGGAGttttttgcTTGCTCCGTGCTAAATCCAAATTTCAA
TCTGTTATGTCAAGATGTTATCCAGGCTGATACTTCTCCAATGACCATGA
GGCTTGTCAATGTGCATTGGTGGTATTTCTTCTCTAAAGTCATTGAATTT
TTGGATACgttatTCTTTGTCCTTCGCAAAAAGAACAAGCAAATTAGTTT
CTTACATGTTTATCACCATGGGTCTATGTTAATATTACAATGGAGTCTTG
TAAAATATGTTCCAGGAGGAGTTTCTTACTTTGGTCCCATGTTGAACTGC
TTCATCCATACTTTAATGTACGCTTATTACATGTTATCTGCATTCGGCCC
TCACATGCAAAAATATTTGTGGTGGAAGAAATACCTAACCAGAATGCAAA
TGATGCAGTTCGTGATGATTTTTGCATACGTTTGTGGCGCCCTCCACATC
GATTGCAGTTACTGGCGCTACTTTTTGGTTTTTAATGGAACATACCTCAT
CTCTCTACTGTTTCTATTCGGTCAATTCTACATCTCTTCTTACCTTGAAC
GGAAAGAGAAGAGTAAAACTTCCTAGCTATTTATTACACAATTTTATATA
GCTTTTCTTATATCGTTTTGTTCCGTTCTTTGATTTTTATATACGAAAAA
TATCGGCATTTTGTCTGTCAttaattaaaacaatttttagtgCCCCCTAC
ACTTGATCgttaaaatatttaattttactttGATAAACTTCGTAAGTTGT
CTGGCTGCAAGGAATTCCctatttgatttatatttcattGAAAACTAATC
TTTCCAACTTAGAGGTTTGTGGTCAAGCATATCTACCACCAGTTTAGTAT
TACAATAACTTTTTAGCAAGTTTTTCTGCTAATCTATTACAATCAAAGGC
ATTAACTTTATTACAAGGAAATATTATATAGATAGATAGGgttgatataa
aaaataaatctttatCTTGgccataaatatttttttctcgatttgtTATC
TGATTCCTTCTGCGGGTATTTTAACTCAACGTGTGTGGTACACGcttgct
ttttataagaatcttgtttttttcaattcatcatggatattcttaacttt
ttgaggaaaattgtcctgaaatattcttaggTCTGGATCTAATCCCAGCA
AAACTTTGGCATTTTTGTTGAATCTTTTAGCATTGCTGTGTAATAAAAGG
CAATTCAACGGTAAAATGCTCTAAAGATGGGctttaggttcagttgccat
ATTCAATGATGGTtgtattcttaccatattcttaatcttttggccaattt
catcatagatattcttataaagtatattcttattgaaaaaaagcgtgtat
gatgTTTCGTAAACTCAATTTGAATTGCAAATGATTTGACTTTGACCGAT
GAAATGAATCAGGGTTTCACAGTTTTCCCGAATTGACAAGCTTGTGTATT
TtattgatgtaaaaatactgATATGAATACAGTAAACTCCTTCTAGCCTT
TTCGTAATCCCAGCACACGCTCAGGTGGCTAATAAACGGGGGCGaggtcg
gaaaaattttcaaattttaataagtGGGGAACCCGATTGCCGGGTCTGGG
Run BLAST on NCBI

transcript from alignment at sc0000464:23..7476+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023867 ID=TCONS_00023867|Name=TCONS_00023867|organism=Clytia hemisphaerica|type=transcript|length=7454bp|location=Sequence derived from alignment at sc0000464:23..7476+ (Clytia hemisphaerica)
ctttggtattttcgttgcgtcacagcaaaaggttttttttattttagttt
gtatctttgaaagaccacggcggatttaggcagggctgtcggatttagga
ccactcacggtacctaCAATGAACAAAGATGGTATGTatgcacaaaaaaa
tattttcgaccgatcgaccgaccgacccactttGTAAAGTcgacataatt
attcaacatggctgcctctttaaaaaaaggtataTTTTTAAAGATCCGCC
TTATCAGACCGGGCCCTATCCGGTAGTTTCCTACCcctagatagggaaat
cacagcgcttaccagacattgtactctgtgctcgcgacacatcagagccA
TGCTTTATCGATGATGATACTCGTAGTACTAGAGAACCTTGCGTTCTCGC
AGGGTAGCGAACATATGAGTACCTTCACCACACCACATCTCACCACATTC
AATGTCCAGCATATCACCctatactcttgtatcagagtgatggtacccta
ttcccctcacatggtatgggtcagtatgggttgacccgggcaaaggagca
ttcacttgccaagtgcgAAGTAAGTGGCAAGCACCGAGTGGGAATCAATC
CCTGACCTCCAGCACGAAAGTCAAGAACGATGATAACTACACTACTGCAC
CCTTTTGATCTAGTTTAATTATTTAATTTAGATCTAAGACGGGAAAATCA
TCTCAGACCAAGTTAAACCTCTAAAAGacataaaaatttgataccttttc
actttacacgtttttttcatcCGCCATGTTGATCTTTCCCGCTCAAAATC
ATTCCACTTTTAGAATATTCGACCTGGGCTAGCACCTATACTCGAATTAA
GATAAGCCTTGAATCTGCTAGTTCAATGATTTTCGTATGATTGTTGATGG
CTTTCGGGCAAGTCTGCAAATTGAACAAAGGAGGAGTTATGGAACGATCT
CCTTGCCTTGCGCAACACTCCTCTTACTGTCTTAACAACATTACAAGTGA
TTTGCCTTTGCAGGGTGCAGGTTACAAAAACGGTTGGCAGAAGATTTCGT
GACTGGGCCACTGtaagttatttttatttaaacttGCAATTTTCACGTGC
AGTTGACAGtgtgtttgtttgcttttattgtttaaaatagATCCGCTCTA
TTCAAAGTTTTAGAAGGACTTCCTGGGACCTAGCTAGTCTTTCCCTTAGC
ATTCTTTGGTAAACAACTCGAGCTACTTTACAGAGTGTTTTTGATTTCAT
TGCCTAAGTTAGAGGCTTCAAAATAGGTCAAGGATCTTTGAATATTCAGG
CTTTTTGGTCTGAAATTGGGTGAAAAGTTCTGTATTATATGCTGgctgaa
aagtttgatttcccAACTTGCAGCTCTACCCATATCTCAGCACTCAAAAA
GACCAGTTTGGCAGCTACATGGTTTCTCATGGTTTATCGGGAAACCTGGA
TTTAACATATTTTGTCTTCtttaaagtcagaaaaacttggaaaacataAG
CTCCAATTCCATTTAAATCTGAAAAAGGAAATCTGAAATCTTAGCCCCAT
ATTACTGGGGGAATTTTTTCCAAAGGACTGGAAAACAGAGGATGAAACCT
TTTcttgaaactgaaaaattggggaaactttttttaataattgaaaatgt
gtgagacatatttgtttgaaaattgtgtGGTACTGTAGTGACTGTATGAA
ACTCATgctgagagttggcacctctgcTTTATCACAAATTTATGAATTAC
ATATATGTATATTGGAGGCTCCCTCAGCGTTAACTCTGAGCACAATATCA
CACGATATTTGGTcttcaaaaacagaaaaaaacttaGATAATGACGCAAT
CCATTGAAAAAGTCCGAATTAGGCATCGcagctcaaaaatctttcaaata
cgATCAtgttttgacctctgatcaagcaatcacaaagaaaaaatttccta
aTTACGTAATCCAGAAAACCACTTAGGGGAGCCTCATATCTGCTCATATT
GGGACCTTGAACACAACActcatcagaaaaatttaaaactgcTTTGTCAG
ATTGAGAGGCCTGTCTGCTTTGTAAAACAGCAAAAACAACACTTTTAAGa
tttaattttttactttttattatttAACCTATTTTGGTCCTATCATTTGG
CCAAAAAAAGTCCTACTCTAATACACAGTTTACACAAAATTGACCAAGAG
CCTTGCTCTAGTCAAcgaaatttttccatttttttttctttctttttttt
atcattttctgatATAAATTTTTTCCTTAGATTTTAACTCTTTGTTAACA
TTTACTGTTccatattttgtattttcattTTCTTGGAACCAATATTTTGA
TCTTTAATCATATTTTTTTCTTGCAAAGTGTACATAGCACGAGAGCCACC
AATGGTTAAAAACTTATGTACATAGTTTCTTTCTTTATGttattcaattt
gaaataaacctaacctaacctaacctaacctaatgaacaaatcaacaaaa
attgaGGTTAATCTTGTGTGGAAAAAAATCGTTCCATACAATGTAACCTG
ATCCCTTTCAGTAGGATTATACTACAACAAAATGTATTATTGACAGATTT
GTGGTTTCCTTCAGTTTGTAAAAGCAAAGACAAATAAAACAAGATTTTAA
CAACCACAAGAGCTGTCAGAAGGGCTGAAGTACTGTTAAAGCATTTTATT
AAAAACTAAACTGCCTTGCTTAAGGATAGAGAACTTTCAGTTTGTATATA
GTTTTGTCAACCAAAGCTGTTGAGAAATTCCACTTGATTCTGATACtgta
atgaaaattatttttcttatctcTAGAAAATCAGGCAATATGGTGTTTGA
GGGGCTTGTTGGTTATTATGATTACATCTTGCAAACAGGCGATGTGCGAA
CAGCAACAATGCCATTTATCCAATCACCAAAATATGTTGTCTGTGCTGTC
ATTCTGTATTTGCTGATGGTTATTTTTGGTCCCAGAATCATGGAAAAACG
CCAACCGTTTCAACTACGCAATGTACTCATTGGATACAACTGTTTCTCTG
TTGTATTCTCAGTTTGGATGATGTGGGAGGtaataatattttctttatgg
atcatatttttctgaaaaatgagagcaccaatttcaatttctaatCTCCA
AAATATCAATctgtttttatttcagttttttgcTTGCTCCGTGCTAAATC
CAAATTTCAATCTGTTATGTCAAGATGTTATCCAGGCTGATACTTCTCCA
ATGACCATGAGGGTAACTAGATTTAATTTCTATTAATTTAagaatttatt
aatttttaagaccTTTTTTGAATTGGTTATCAAGGTTGTCTTTATTAATT
TCACAACCTATGCTATATATTTTGTTCCTATTTTGCAAATTCCACATATA
TATGAGGCTttacaaataatttttaatttacattcatcTGAAAAAGCTTT
GAAATTGCTTCAGTGGCTCTTTGTAGGAGAATTTGTAAAGACTTCGAAGC
ACTGCCATTTACCTTTCATTCAGTATTTTGCTATATAAATTGAAACACGC
TTTCTTATATCAGCTTGTCAATGTGCATTGGTGGTATTTCTTCTCTAAAG
TCATTGAATTTTTGGATACggtaagttttttttacttgctattaaaattt
caacctaCGGAAGGTTTACATTTCGCAATGCTGAAACATTTTGATTGTGC
TAGAAACGCATATGGTTTACTGATAGACTCTTTTTAGTTTATTTGATGGA
GTAGGTTACTATATGAAAGAAATGCTCTAatacttttgttttattttttt
agttatTCTTTGTCCTTCGCAAAAAGAACAAGCAAATTAGTTTCTTACAT
GTTTATCACCATGGGTCTATGTTAATATTACAATGGAGTCTTGTAAAATA
TGTTCCAGGAGGAGTTTGTAAGTACACCATCCTATTATTTTCTTCCTATT
ATATCTCCAGagatatttttgaatttgataacTGATTAAAGAGTAGTTCT
ATTTTTATAACCTCCACGTTAATTAGTTTGCCAAGGCAACAGATAACTGC
AACTAACATTGTAATTATCATCAATTTAGTCTTAAATAGGAACTTTTTTC
TGAGCTGCAGTAATCTGCTTTTGAATGATTTTATCCATGTCTAATTGATG
TTCAACTTGAAATTTCGGTTTATCTTGTTATTTCCTTCTTCTAGCTTACT
TTGGTCCCATGTTGAACTGCTTCATCCATACTTTAATGTACGCTTATTAC
ATGTTATCTGCATTCGGCCCTCACATGCAAAAATATTTGTGGTGGAAGAA
ATACCTAACCAGAATGCAAATGGTAAGATTGTTTTCCTTTTGCATGAAAT
TTATACTAAAACTGAAAAGGGTAAAAAGTTGTGCTGTCGCACTGAGCATA
AGTATGTAATAGCTGGTTTGTTAACCAGGTAAACTATCTATTATTAGCAA
TCCACATTCATGAATCACTTAAGTTATATATCTTATCTGGGTTTGTAACA
ATGAAAAATGCACGCGTCTCACATACAAACACACTTTTTCATCACAATAT
CATCATTGCACACACCCGTTCTTCACCAAAGATTTGCTTTTCAGCTGAAA
TAAAATTTGCGCGAAAATCTGGGCGAAacattttttggtcaattttttca
aatgaagAAGGGATGTGCAATGATATTGGAAAGTCCCAGCCGAAAAGAAG
GAAAGCAGCAAGACATCAAGGAAATTTTAGTCAGGTGCGTATTCTTTTTA
AGCTGGGACTTTCCATTTTTTCTCTTACACTTGATGTGTATTTTCTCAAT
GTCTTAGAACTgcttctctttttctttctaGTACCAATTCGTTCTGATTT
TTTTACACGTGTCAAACGCCATGACGCACAAGTATTCACCCAACGCAATC
cctgttaatgttttcttttggCTCCATTGGTTCTACATGATTTCACTTTT
CTGGCTTTTCCAACATTTTTACCAAAATGCCTACCGTGCAAAGAAATTAG
AAgaatcttcaaaatcaaaagccGAATAGATAACACTGTCTGGTCTGTAA
AAAGTCTCAGCTGTAATGCACTTTCCTCAACAAAGATTCAGGGAATTACA
AAAGATTTTTGTCTCAGAAAAAGGTGAATGGATTTTCACTTCCATggact
gaaaaattgaaagtttattATGCAAAAAGCAAGCAAACGCTAAGAGTTAG
TTTTTACATATTTACGCAACAACgaaacaacaaaaaactttgAGAGATGT
AGATATTTGAATTCgtagaagaaatttttttttTCATAAGTTCCTATGAC
CCGTTTTTATACCATGCAATTATTTTTTATTTTGGATTTTTTTTCGTTTT
TTAAACCTCCTCTATCAAATGTCATCACTAGCCGGGTCAAGGGGTTTCCT
TTGGGACCACGTCATCACATTTTTATCTCATTCCCTTTCAACCAATACTT
TTGGTGACTTGTATTGGTATTATGATGTCTGTATTTTAGGGGAGGTATAA
GTAATTCTTGATAATAATAAATATTTTAAAGGTTTTGTTTTTAAATACGA
GTGATATTGTTTGCTTACTCATCATTTTTGATTTAAAAGCTTTTTCACGT
TGAATTGACATGGATGTGGAGCAAGACTTGTCAGAAAGAGGGGCAGAAAA
ACATTTTTTACTTAAATCAGCATAACATAACAATAGGGAGACACCGTCCT
GATACGAAGTATGCgtctgatatgaaacgggaacactcatgtaaaaacaa
aacctttaatgatGATTTTTAcattacgttttttgattatttAGATGTTT
GCTTAAATTGTAGCTGTAATTATTTCAATATCGTGTAGATAGAATGAAAA
TTAGCAATTATATCACAGAAAGAAAGATTGCATTACATTTTATCATTGTG
GAATATCAATGTTGTTATTCTTCTctgatttcaaaatgtttcgtaAAAAA
CTGATACATACAAGCACTCAACTTTTGACCTTCGATAGaaagaaattgca
aaatctCAATGCAATTGATATCCAAAGATATGAAGGATTGAAAAATATAG
TCAGATATCTTCGTAATCTATCAATCATCTTACACTGCTCTATCTATTCT
GTTATAAAGGGCAATCGAAAGTGAAAACTTgcgaacaaaaaaatcacatt
tgcATGCATAAATCACAACAACTAGTAACAAACACACATCACGCACAAAA
AGCATTCACCACGAAACACTAATCTGACTCTAATTTTTGACCTTTCATAC
CTTTAGATGCAGTTCGTGATGATTTTTGCATACGTTTGTGGCGCCCTCCA
CATCGATTGCAGTTACTGGCGCTACTTTTTGGTTTTTAATGGAACATACC
TCATCTCTCTACTGTTTCTATTCGGTCAATTCTACATCTCTTCTTACCTT
GAACGGAAAGAGAAGAGTAAAACTTCCTAGCTATTTATTACACAATTTTA
TATAGCTTTTCTTATATCGTTTTGTTCCGTTCTTTGATTTTTATATACGA
AAAATATCGGCATTTTGTCTGTCAttaattaaaacaatttttagtgCCCC
CTACACTTGATCgttaaaatatttaattttactttGATAAACTTCGTAAG
TTGTCTGGCTGCAAGGAATTCCctatttgatttatatttcattGAAAACT
AATCTTTCCAACTTAGAGGTTTGTGGTCAAGCATATCTACCACCAGTTTA
GTATTACAATAACTTTTTAGCAAGTTTTTCTGCTAATCTATTACAATCAA
AGGCATTAACTTTATTACAAGGAAATATTATATAGATAGATAGGgttgat
ataaaaaataaatctttatCTTGgccataaatatttttttctcgatttgt
TATCTGATTCCTTCTGCGGGTATTTTAACTCAACGTGTGTGGTACACGct
tgctttttataagaatcttgtttttttcaattcatcatggatattcttaa
ctttttgaggaaaattgtcctgaaatattcttaggTCTGGATCTAATCCC
AGCAAAACTTTGGCATTTTTGTTGAATCTTTTAGCATTGCTGTGTAATAA
AAGGCAATTCAACGGTAAAATGCTCTAAAGATGGGctttaggttcagttg
ccatATTCAATGATGGTtgtattcttaccatattcttaatcttttggcca
atttcatcatagatattcttataaagtatattcttattgaaaaaaagcgt
gtatgatgTTTCGTAAACTCAATTTGAATTGCAAATGATTTGACTTTGAC
CGATGAAATGAATCAGGGTTTCACAGTTTTCCCGAATTGACAAGCTTGTG
TATTTtattgatgtaaaaatactgATATGAATACAGTAAACTCCTTCTAG
CCTTTTCGTAATCCCAGCACACGCTCAGGTGGCTAATAAACGGGGGCGag
gtcggaaaaattttcaaattttaataagtGGGGAACCCGATTGCCGGGTC
TGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013414XLOC_013414Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023867-exon-sc0000464-1491911889:23..1084TCONS_00023867-exon-sc0000464-1491911889:23..1084Clytia hemisphaericaexon
TCONS_00023867-exon-sc0000464-1510915933:23..1084TCONS_00023867-exon-sc0000464-1510915933:23..1084Clytia hemisphaericaexon
TCONS_00023867-exon-sc0000464-1575043694:23..1084TCONS_00023867-exon-sc0000464-1575043694:23..1084Clytia hemisphaericaexon
TCONS_00023867-exon-sc0000464-1491911889:2849..3101TCONS_00023867-exon-sc0000464-1491911889:2849..3101Clytia hemisphaericaexon
TCONS_00023867-exon-sc0000464-1510915933:2849..3101TCONS_00023867-exon-sc0000464-1510915933:2849..3101Clytia hemisphaericaexon
TCONS_00023867-exon-sc0000464-1575043694:2849..3101TCONS_00023867-exon-sc0000464-1575043694:2849..3101Clytia hemisphaericaexon
TCONS_00023867-exon-sc0000464-1491911889:3198..3284TCONS_00023867-exon-sc0000464-1491911889:3198..3284Clytia hemisphaericaexon
TCONS_00023867-exon-sc0000464-1510915933:3198..3284TCONS_00023867-exon-sc0000464-1510915933:3198..3284Clytia hemisphaericaexon
TCONS_00023867-exon-sc0000464-1575043694:3198..3284TCONS_00023867-exon-sc0000464-1575043694:3198..3284Clytia hemisphaericaexon
TCONS_00023867-exon-sc0000464-1491911889:3586..3642TCONS_00023867-exon-sc0000464-1491911889:3586..3642Clytia hemisphaericaexon
TCONS_00023867-exon-sc0000464-1510915933:3586..3642TCONS_00023867-exon-sc0000464-1510915933:3586..3642Clytia hemisphaericaexon
TCONS_00023867-exon-sc0000464-1575043694:3586..3642TCONS_00023867-exon-sc0000464-1575043694:3586..3642Clytia hemisphaericaexon
TCONS_00023867-exon-sc0000464-1491911889:3825..3939TCONS_00023867-exon-sc0000464-1491911889:3825..3939Clytia hemisphaericaexon
TCONS_00023867-exon-sc0000464-1510915933:3825..3939TCONS_00023867-exon-sc0000464-1510915933:3825..3939Clytia hemisphaericaexon
TCONS_00023867-exon-sc0000464-1575043694:3825..3939TCONS_00023867-exon-sc0000464-1575043694:3825..3939Clytia hemisphaericaexon
TCONS_00023867-exon-sc0000464-1491911889:4217..4344TCONS_00023867-exon-sc0000464-1491911889:4217..4344Clytia hemisphaericaexon
TCONS_00023867-exon-sc0000464-1510915933:4217..4344TCONS_00023867-exon-sc0000464-1510915933:4217..4344Clytia hemisphaericaexon
TCONS_00023867-exon-sc0000464-1575043694:4217..4344TCONS_00023867-exon-sc0000464-1575043694:4217..4344Clytia hemisphaericaexon
TCONS_00023867-exon-sc0000464-1491911889:6279..7476TCONS_00023867-exon-sc0000464-1491911889:6279..7476Clytia hemisphaericaexon
TCONS_00023867-exon-sc0000464-1510915933:6279..7476TCONS_00023867-exon-sc0000464-1510915933:6279..7476Clytia hemisphaericaexon
TCONS_00023867-exon-sc0000464-1575043694:6279..7476TCONS_00023867-exon-sc0000464-1575043694:6279..7476Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000464supercontigsc0000464:23..7476 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.386	14.1285	8.36837	9.28756	3.5322	3.02283	2.66877	3.92366	3.74911	2.99631	7.62206	7.87896	23.7606	26.8363	9.46227	11.6994	17.9589	22.3503	18.4273	14.8052	32.7975	30.6127	26.2781	30.7161	28.3412	27.4021	20.2948	37.8762	62.4313	73.2157
Blast
[Close]
BLAST of TCONS_00023867 vs. Swiss-Prot (Human)
Match: ELOV4 (Elongation of very long chain fatty acids protein 4 OS=Homo sapiens GN=ELOVL4 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 9.142e-62
Identity = 112/255 (43.92%), Postives = 161/255 (63.14%), Query Frame = 2 
Query: 1094 VGYYDYILQTGDVRTATMPFIQSPKYVVCAVILYLLMVIFGPRIMEKRQPFQLRNVLIGYNCFSVVFSVWMMWEFFACSVLNPNFNLLCQDVIQADTSPMTMRLVNVHWWYFFSKVIEFLDTLFFVLRKKNKQISFLHVYHHGSMLILQWSLVKYVPGGVSYFGPMLNCFIHTLMYAYYMLSAFGPHMQKYLWWKKYLTRMQMMQFVMIFAYVCGALHIDCSYWRYFLVFNGTYLISLLFLFGQFYISSYLERKE 1858
            V +Y +     D R    P +QSP   +    LYLL V  GP+ M+ R+PFQ+R VLI YN   V+ ++++  E F  S  N  ++ +CQ V  ++ +   +R+    WWYF SK +E+LDT+FF+LRKKN Q+SFLHVYHH +M  L W  +K+V GG ++FG  LN FIH +MY+YY L+AFGP +QKYLWWK+YLT +Q++QF +   +   +L+ DC + ++       Y IS +FLF  FYI +Y E K+
Sbjct:   23 VEFYRWTWSIADKRVENWPLMQSPWPTLSISTLYLLFVWLGPKWMKDREPFQMRLVLIIYNFGMVLLNLFIFRELFMGS-YNAGYSYICQSVDYSN-NVHEVRIAAALWWYFVSKGVEYLDTVFFILRKKNNQVSFLHVYHHCTMFTLWWIGIKWVAGGQAFFGAQLNSFIHVIMYSYYGLTAFGPWIQKYLWWKRYLTMLQLIQFHVTIGHTALSLYTDCPFPKWMHWALIAYAISFIFLFLNFYIRTYKEPKK 275
The following BLAST results are available for this feature:
BLAST of TCONS_00023867 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ELOV49.142e-6243.92Elongation of very long chain fatty acids protein ... [more]
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