TCONS_00024003 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024003
Unique NameTCONS_00024003
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2437

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024003 ID=TCONS_00024003|Name=TCONS_00024003|organism=Clytia hemisphaerica|type=transcript|length=2437bp
AAAATACAAAAGTGTTATTCATACCATGAATATTGTAAACTTCAAATCCT
TCTTTTCTTCATATTTTCAGGTTTTACAGAGCCCAAAAAGAACAAGCATG
AAGTCGTCTTATTTTGGGGACAAAACACAGCTCGTTTACCTGAGAAAGAT
TTAAGTTATTTTTGTGAAACAGGAAAATACGATACTATTGTTATTTCCTA
CATCACAGAATTCTTTGCCAATCAAATTACTCGCTACCCTGGAATGAATC
TTGCGGTGCATTGTTGGAAATTACCAAGCAAAGCATACCCAAATCTTTTT
AATTGTCCCAACCTTGGGAAAGCTATTGCAACATGCAAAAAAAAAGGGAT
CAAGATACTCCTTGGTATCCGTGGTGAGCGAGGAAACAAATGGTTGACCA
GTAAACAAGACGCAGAAGACTTTGCAAACAGAATTTGGGATTTGTTCTTA
GGTGGAGATAAAAGTCCAAGGCTTAGACCATTTGGAACTGTCAAACTAGA
TGGTATCAATTTAAACATCCGTATCGGTGATGATAAATATTATGATACGA
TGCTTGACAAATTTAACGAATTATTTGCTGAAGACCGTAGTCAACATTAT
CAAATCACAGCATCACCTCAATGTGGATTACCGTTGTCTGATTTTAAAAC
AAGTTTAGATTCACGTGCTAAATTTATTGATGCTGTTTATATACGACACG
ACTATGGTGTTGATTGTCATCCTGGGGGtagtgattttgatgaaaacttG
GAACAATGGACCAAGAAAATTCGCTATTGGAATGGAAAGACATttaaaaa
tacgaaattttatTTGGTACTGGTGTTGAGTTTGGAATTGAAATATTATA
TGACGTTGTGGAAAAACTTTAAACCAATTTACGAACAGacatTGAAGAAT
ATCAATGAGTTTGGTGGTATTGCTTTAGAAGACGCAGGTTGGGATGATTA
TAGTAATCCagcagaagaaaaagaaagatattcTACACTAGTATGGCATC
TTTTTAATCCTAAAGGACCAGAACCATGGCAACCAAAAGTAACAACCACT
TCAACAACTACAAAAGCACCTCTTAATCTAAAAGTTGGTGCTTTGTGGGG
ATCCAATATTGCAGAGGGGACAACTGGTAATACCGAACCATCACTTCGCG
TGGTGTGTGAGAAAAATCTTTACGATACTGTTATTATCAATACATTGAGT
GATGATgcaaatgaccaaaataaaGGTAATTTGCCTGGATTGAATTTCGC
CAAACATTGTCATACACCCTTTGGTCCTGGTTACCAGAATTATCTCCGGT
GTAACACCATGGGAAGTGATATCCAATTCTGCCAAGACAAAGGTGTTAAA
TTTCTACTCAATATCGGTGGAAGTACAAGATTTATTGGATTTGCCAGTAA
AAACGAATCACAAACATTTGCTCATAACTTATGGTTGTTATTCCTTGGTG
GAACTACAGAAGCAGCTGAAAAGAGTTTACCAAGAACTTTTGGACGTGTT
GTATTGGATGGTGTCAACATTGAAGTGCGTTTCGGACAAGGGGCTTATTT
CGTCAATTTCGTGCAAGAATTACGTGAAATCATGGACAAAAAGGGGGAAG
GCCGTGAATATATGATTACAGCCAACCCGAGCTGCGTTCATCCGTCTTAT
ATTCTAGACGAGTCTTTCTCAAAAGCTATCACAAGCTTCGATCACTTATA
TGTCAATTTTGATGACGAACAATGTCATATTAATAAACCATCAGGGTTTG
AATCAGCTTTCCAAGTTTGGTATGATTATGCTGTTCGAAATGGTGGACCA
AAAATTTGGGTTGGACTTCCGTCTGATCCGAGAAACACAAGAACATCAGA
GCATTATCTGAAAAGAGTCAATGCTAAGAATAAACTAGAGAATCTTGCAA
AGAATTATCCAAAATTCGGTGGAGTGATGTTAAATGACGTCAGTTGGGAT
ATGGAAAATCAAGTTTTAAGCGTCCACTACAGTCAATATATAGGTAGCGT
TTTGCGACCTGGTCGTCTCCCAGGGCAACCAGACCTTGTTACTACGAAAG
CACCAGTTACTAGGACAGTGACGGATAAGAAAGGAGGTGTATCGGTGATT
ATTGTGAAACAAACGACAAGAAGAGTTTGGGTACGACCCACTGGTCCTGT
ACAGCTCGGTGGATCAGCAGccAATGTCTATCCAGGAAAGGTGCTGACCA
TAATTTGTATTACCATGGTTACAGTGTTGCTGATGAAATTCTTACGGTAA
CCGATTTTGGATtggagagaaaatatttttgtaattaataTGTAAAAACG
ATATTTTTCTTAGTTTTCCACTATTTTAAGTTTTCGGTTCCTTTATtcat
tttagttttattttcaaaattttagtatttcaatattatttaaagaaaga
atttttaaattttatttttgaaaattttgtaacTCTT
Run BLAST on NCBI

transcript from alignment at sc0000470:191702..202457+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024003 ID=TCONS_00024003|Name=TCONS_00024003|organism=Clytia hemisphaerica|type=transcript|length=10756bp|location=Sequence derived from alignment at sc0000470:191702..202457+ (Clytia hemisphaerica)
AAAATACAAAAGTGTTATTCATACCATGAATATTGTAAACTTCAAATCCT
TCTTTTCTTCATATTTTCAGGTTTTACAGAGCCCAAAAAGAACAAGCATG
AAGTCGTCTTATTTTGGGGACAAAACACAGCTCGTTTACCTGAGAAAGAT
TTAAGTTATTTTTGTGAAACAGGAAAATACGATACTATTGTTATTTCCTA
CATCACAGAATTCTTTGCCAATCAAATTAGTGAGTTTATATTATTGATTA
TTATCCGACccgcgtaaatagcgacatttgattggcttctttgctgtcca
atattttcgaatatatagcttccatggaggctacatatttcaaatattga
cgtcacacaacgagttcattgacaattgagcatcttctttttgacgtgac
gtcacaaaataaaaataagactttagaatgaaaaactaccaagaaaccag
atttatgagtttataaattggaattatgtttgaaaacgagaaatatttta
gcgatgaacggataataaaccatttatttggacgcagtctcatccaatat
gaaaaatattggaaatNaatatgaaaaatattggattcgactttgtccaa
taactgcttaatatCTGCAGGTGGCCTAAATAATTATCTATGAGAATTTA
ACATATATGCCTAATActggaaaatcaaatttcataaTTTGCCTTTGGTT
AAATACATTGCAAGCACAGCTTGACACCCAGGCAGAGGCGTAGTCAAAAA
TTCTTACTCCAGGGGGGGCAAAACTTTTCCTATAGCCTTAAAAACCATAC
ACACCCTTTGACTGAATCTTTTGAATGCGCCTCAGTAGGTTATCAGAGTT
TccaaaaagatttaaaagaatAAAACTTAAAACAGTTCGTCGTTAGCTAG
AAGTTATATTCAGCTCTAGGCCAAGAAGCTAAGTTATAATTGCACCATTT
TTANCCGTTAGCTAGAAGTAATATTCAGCTCTAGGCCAAGAAGCTAAGTT
ATAATTGCACCATTTTTAAATTAATCTGAAAAACGATACATGATTGTGTT
TTAATAACTTCATTTCTTTCACTTTTATTTCCATAGCTCGCTACCCTGGA
ATGAATCTTGCGGTGCATTGTTGGAAATTACCAAGCAAAGCATACCCAAA
TCTTTTTAATTGTCCCAACCTTGGGAAAGCTATTGCAACATGCAAAAAAA
AAGGTATGTATGGGAGACAACACATTTTTGgatcagatgagatggagttt
ttacaagatactttaataattggtcatttgaagtaataaaaatggcgcgt
tctttagaaaaaaattgttttattactggttaacgaccaacaaaatcaaa
taagagcttgtaaaaactccatctcgtccctcGCACTTGGTAGAAATGTC
AGGCGAAATGACGTCTTTTGTGTGTGGAGGTCTCaagccttaaaaatcaa
aactagGTAAAACGACATTTTATATTCATGATTTTGTCTTTTTACTGCCG
AACTTTACAtactggttgttgaaatacgcattattagcgcttctttgatg
ctaGTTCACATTTTAAAAGTAATTATGTGATATTGTTTTAGTTTTGCTCA
GAAAGATTTCGCGGATAAGaccttttcaaatttctattAAGACTAAATTT
CGCGGATAACACCCtgcaaatccgcgaaatttaatccccacgaaaatttt
atcccattaatgAAGTATCTTTTACTTTTCAGGGATCAAGATACTCCTTG
GTATCCGTGGTGAGCGAGGAAACAAATGGTTGACCAGTAAACAAGACGCA
GAAGACTTTGCAAACAGAATTTGGGATTTGTTCTTAGGTGGAGATAAAAG
TCCAAGGCTTAGACCATTTGGAACGTAAGTGTGATCCTATTATAGTATAA
AAACACCGCCTCTCACAGACCCGATAGTAATTTTTCATCCAATGGGGGCA
AAAATAACAGgtcaaaactcgatggggattaatTTTCTAATGTTCTTTAT
GTATGATGATTGCAATTTTTCAtgtcagaaaattcagcggGGATTGAAAA
AAAAGCATATTTTGCAACAGGGATTGttggtttattttattatttttttg
cagggacaaaaattggaataTAGTTTTCcgctggggacgatattttggcc
actTTTTCCAGTGGGACGAGGTTTCACCGGTTCTTCGAGAAGGGGGCGTa
caaaacgttaaaacaacatcTTTACAACGTCCATACAAAGTTTGATTCCA
ACGTTGATCCCCTTAATCTTTAAACTTAGAAAATGCCTTAACTTTCTTTC
CCGAGAAAGCTCAAAACTTTCGCAATAAACAatgctgaaattttgaaaaa
tctttaagagAAGAAAAGGATGAGCTCTTAAGACTGCAAATACCATTCAA
AAAAGGTTCCACTTTCCTTCTATGTGTATACAAGGGGCTTTTTCAGACAC
ACTGCATACAAAAAAATGCTAAACATTCATTTTGCAGTGTCGATCTGACT
CGTCAAATTAAAAGCATCTTCCTCCTAAGCCTGATCATTTCGAAAATACT
TCCTCATCCTATACAAAAAGATTTCTGGTCCGGATAATGTATACAAAATG
ACTTGACTGACTAATTTACTTCAATTTTACAGTGTCAAACTAGATGGTAT
CAATTTAAACATCCGTATCGGTGATGATAAATATTATGATACGATGCTTG
ACAAATTTAACGAATTATTTGCTGAAGACCGTAGTCAACATTATCAAATC
ACAGCATCACCTCAATGTGGATTACCGTTGTCTGATTTTAAAACAAGTTT
AGATTCACGTGCTAAATTTATTGATGCTGTTTATATACGACACGACTATG
GTGTTGATTGTCATCCTGGGGGtagtgattttgatgaaaacttGGAACAA
TGGACCAAGAAAATTCGCTATTGGAATGGAAAGACATttaaaaatacgaa
attttatTTGGTACTGGTGTTGAGTTTGGAATTGAAATATTATATGACGT
TGTGGAAAAACTTTAAACCAATTTACGAACAGGTATTGATTCTATGATGG
TTCGTTCTCCAAAGTTCAGAACCCCTTTGAGATACACTTTTGAATGATCA
gttgaaattcaattttaacatttttttctgtCGTGTAATTGTGACCCTCC
CGGGGAGAGGTACCTAGAAGACCAGGTGACAGGTACgtgcgagccataag
gatcCCCTTTTTCATACTAAAGttcctcaaaggggtacaaattcataagT
TAGTCTCTCTCAAAGGACcccaaaatcactaaaattgatAGTTTCCCTCT
CATAGGGtcatgattttcgaaaattttgagccaaaaattttgacaaaaat
gtctCACAGgatctcaaaaatgtcaaaattttttattttcgatttttagc
TCGGACAGGGTCACCCGGAGGTTGACTAGGTTTGCGAAGCGACAGACCCT
CTAATTTGCAATTTATGGAAGAATAGCACATAAACATATAACGAACCAGA
TCCCTCCCATGCGAGAGAGGGGATAACTTTTGCCGTAGGATGGCTAAACT
CAATATCCAATAGGGATAAAATCATTGCTCTAAATCTTCACAgattgaaa
gttgaaattttaggTTATTTCTACCACCGGGGACaattttttttggccaa
ttGTTACCAGTGGGGTGGGGTTCAACCAATCAGGTTGTGTAAATATTGTg
attttctcatttctagacatTGAAGAATATCAATGAGTTTGGTGGTATTG
CTTTAGAAGACGCAGGTTGGGATGATTATAGTAATCCagcagaagaaaaa
gaaagatattcTACACTAGTATGGCATCTTTTTAATCCTAAAGGACCAGA
ACCATGGCAACCAAAAGTAACAACCACTTCAACAACTACAAAAGCACCTC
TTAGTAAGTGTGACCAAGGattttcaattcatgatatgcaccattgcaat
gttttcCAAGGACGCTACAGTTAATTGGTTGTATTGACTGATATTACGTC
Atttacaatggtgcatatcatgaatacacactttttctttactctgtacc
agagtgtacattaagggaacttattttggcgaaaaatATCTTTCGCGTTA
ATTTAAGTTAACATTTTGCCCAAATAACCTCTAGAATTCATAAAAATTAC
TCAGAATGAGGCAAAATAATATAGATTTAGtttgtcattcgccaaaatta
gttctcgccataataaataaaattgaccattcgccaaaataagttctcac
caattttaaaatttttcaagatttccaCTACTcgtcaaaattaattttcg
ccAAACCTATTTGGTGTATTTCACGTATAACGTAGCGTAAattcaatgaa
ttttgaaatttccgtaGATATCGGTTATGTTTACACACAAGCTTTTCCCT
ATAATAACAATTTTATGAAAACAAGAAGCttaattttggtcaatttcttt
AGATCTAAAAGTTGGTGCTTTGTGGGGATCCAATATTGCAGAGGGGACAA
CTGGTAATACCGAACCATCACTTCGCGTGGTGTGTGAGAAAAATCTTTAC
GATACTGTTATTATCAATACATTGAGTGATGATgcaaatgaccaaaataa
aGGTATGTATACACTTGAATAGTTTTTGTTAAGAGTGtatatacactttg
aaactAAATTTATTCGATATTTAAGTGCAATACAGTATAAATGCAtgaaa
tattacaaaaaatataagaattaCCTTTGGTATATGTAAAAAAATTGTCG
TGCTTTACAAGTTTGGCTTTGGGGACGAGATCGAACCAAATAAATAATTA
CACGCCTTCACATGATGAACTGTTTCGAGTAAAAACTGAAATTAAAACAA
AAGTTatttaaccctacctactgagagggggggcacaaagtgccccccct
gttagaaaatttgctggcattttttaactagtgaggctaagaagctgaaa
ttttatgacttttcatcaaattttatgggaaatgttttggttaaaacatt
tttttcattggtcaattattttagtcccaatgacaggtttgtcggtgacc
actaccatcccacaactgcagcgcaggctattttgctcttttttatgtgC
TTACTCCAAGATACTATAACATGTTACCAGGTATATTTTAATGGTCCATT
TTATTTGTACTGCTTCTATTACATCTTAAAGTAGAATTAGCAGCAAAAAG
TAAATacaaatatgacaaaaaaaagtatcaccgacttgaaaaagttgaaa
tgttctgattttacgcggttttgaaagtttaaaacattttcttcggtttt
ggcgcgctatagtagaacgtcacgacaaaattgttgatttatactttaat
ttccatttagtacattgtaaaagctttcaaataaaagcaaaatgaaggag
aatgtgtttctccatctgttttaatagcaattttaagaaacatcattttt
tttgagttttttgggtgatttttgccaattgttgatacaattgatgacgt
catcaaaaatagcattcaattttcaaaaaaatttattgataaatttgATT
GTTATAGGTTTAAGCattgctgtaccaaatttcatgaccaaaTAATGTTT
CTATCCTAAGTTATCCAAGGGGGGCACTATGTGCCCCCCCTTTCAGTTCT
AAGGGACCCAAAtagctctcagtaggtagggtagggacaatcagatggtt
tgagattcTCGCCATTTTTCCAAGCAAAACCTCCAAATACTCTTTTCCAA
TTTATTTTGTTACGATATTCAAGTTACAAGGTTTTGACAATACAAACCTG
AACATCCCTGTGTCGCAGACCCGCTGGgtcaatccccattgagatctcaa
tcgaaatttttatcaggtctgtgagacaggggtgtacctGACGTAAaacc
catttttcttttttgcaaaaaggtCAAGAAGAAAGATATGGATATTTTGC
TCAAGACGATTTAGGGAATCTCTAACCATTTGATATTCTTTGGATAATat
gagaaataaaatttaaatcaaTATAAACACAATGTGTTTGAAAAGAAGGT
TGACAGTGGTAGTTCCCTGCAACACATCGACAAACAACAAACTTATACAT
TAAGCAactaaattttaaagaaatatacaaaaacaacacgATAAACGATA
TACGTTCTATAAGATCCCTTTCATTGTCCTATATATAACAATTTATACAA
CTATGTATTGAATTTTCGCATTTCAGGTAATTTGCCTGGATTGAATTTCG
CCAAACATTGTCATACACCCTTTGGTCCTGGTTACCAGAATTATCTCCGG
TGTAACACCATGGGAAGTGATATCCAATTCTGCCAAGACAAAGGTGTTAA
ATTTCTACTCAATATCGGTGGAAGTACAAGATTTATTGGATTTGCCAGTA
AAAACGAATCACAAACATTTGCTCATAACTTATGGTTGTTATTCCTTGGT
GGAACTACAGAAGCAGCTGAAAAGAGTTTACCAAGAACTTTTGGGTAAGA
ATCGAAATTTCGCTTTTCATTTCActtgtacatgttttttctttataaga
acatccataaTTTCTGAAGCCTCTGGATGTTATtaacttttttagatttc
ttctaaatatgttcttaattttcttactttgtgagtatttttgtccattt
ccctaAAAGAAATTTGGAGCCTAtaaaggcttaaaatgttcttaacttgt
tcataACATTTTTccccattgaagccttatgttcttatatagtttgttct
tctataaaaaaaacgtgtaatgaatAGAACAAGTAACCCGGGGATGGGTT
AAAGAGATGTGATAAAAGATGGGTTAAAGACCATAAAAAAACCATTCAGT
CTCTATAAGGGCTATGAGATTTCGtccaaaatttgatattttccgcttag
atttcgagaaaatagTCTGTTTGTCTTCCGAATTCAATGGGAACCGGATT
CAATCAGGTTCTTTTGACACTGAACGATGTCTGATATGTCAAATAATGCT
AGCTTAGATTTTTTGCGactgtagtgcagtggtagagcattcggctGCGG
TGTGCaaagttgtgggttcaacccccagccgggtcataccaaagattcct
aaAATGGTACTAGATGCATCTCTGCTTGacgctcagcaattaagagaagg
ataaAGGGTAAGTGGgggcaatccagggagaaagagtggcaccctcccct
atATTTGAGTAGATAGCTATCGATAGAGGATCCTTCATGTCGCCTCCGAC
TAGGTCTTCTTGTTTGCATCTTTTGTATGAAAGCCCATTATCTTTCATTT
ATAGACGTGTTGTATTGGATGGTGTCAACATTGAAGTGCGTTTCGGACAA
GGGGCTTATTTCGTCAATTTCGTGCAAGAATTACGTGAAATCATGGACAA
AAAGGGGGAAGGCCGTGAATATATGATTACAGCCAACCCGAGCTGCGTTC
ATCCGTCTTATATTCTAGACGAGTCTTTCTCAAAAGCTATCACAAGCTTC
GATCACTTATATGTCAATTTTGATGACGAACAATGTCATATTAATAAACC
ATCAGGGTTTGAATCAGCTTTCCAAGTTTGGTATGATTATGCTGTTCGAA
ATGGTGGACCAAAAATTTGGGTTGGACTTCCGTCTGATCCGAGAAACACA
AGAACATCAGAGCATTATCTGAAAAGAGTCAATGCTAAGAATAAACTAGA
GGTAAGATTACATATCACAATATTATTTATTCATgaatatgcaccactgg
agagtcttccgagaatttttaaaattttccacccaatacgtcacttaaac
gaTAGAAAAATTGGGTGGAAAattcagaagactctccagtggtgtatatc
atgaatagatcCACTTTACATTGCTCTATCACGTTAAAAGCGTGTCAACG
TAATACGACTAATTCCCTCGAAAATGGCTTGCATATGATATAATATATCA
CATATTATGTGCTTGTGCAAGTGCACACTTAAAAAGAACGAACTTTAGCA
AATTTACCGcgcagaaattaaaaaaaaagttcttcACGATTTATTAAAAA
ACTGTAATTGCTAGTTGAAGAGTTCTGTCTATTGTTGCGTATTTAGGTTC
ATTACATAATCTTGCATCAATGCCATATCTGAATAGATCTGACTTCGTTT
AAAAGATATTTATAAGTCtgacatttatttttttgattattACAAAATCT
TGCAAAGAATTATCTAAAATTCGGGTGAGTGTTGTTTAAATGACGtcagt
tggaaagatatttataAGTCTGACATTTCTATTTCAATTATTACAGAATC
TTGCAAAGAATTATCCAAAATTCGGTGGAGTGATGTTAAATGACGTCAGT
TGGGATATGGAAAATCAAGTTTTAAGCGTCCACTACAGTCAATATATAGG
TAGCGTTTTGCGACCTGGTCGTCTCCCAGGGCAAAAAGACCCTGTTACTA
CGAAAGCACCAGTTACTAGGACAGTGACGGATAAGAAAGGAGGTGTATCG
GTGATTATTGTGAAACAAACGACAAGAAGAGTTTGGGTACGACCCACTGG
TCCTGTACAGCTCGGTGGATCAGCAGGTAGGTCAACGTTTTTAGATTCTG
TTTCCAGTAGCTTTACAAACTGACGGNTATTTATAAGTCtgacatttatt
tttttgattattACAAAATCTTGCAAAGAATTATCTAAAATTCGGGTGAG
TGTTGTTTAAATGACGtcagttggaaagatatttataAGTCTGACATTTC
TATTTCAATTATTACAGAATCTTGCAAAGAATTATCTAAAATTCGGGTGA
GTGTTGTTTAAATGACGtcagttggaaagatatttataagtctgacattt
ctattttaattATTACAGAATCTTGCAAAGAATTATCCAAAATTCGGTGG
AGTGATGTTAAATGACGTCAGTTGGGATATGGAAAATCAAGTTTTAAGCG
TCCACTACAGTCAATATATAGGTAGCGTTTTGCGACCTGGTCGTCTCCCA
GGGCAACCAGACCTTGTTACTACGAAAGCACCAGTTACTAGGACAGTGAC
GGATAAGAAAGGAGGTGTATCGGTGATTATTGTGAAACAAACGACAAGAA
GAGTTTGGGTACGACCCACTGGTCCTGTACAGCTCGGTGGATCAGCAGGT
AGGTCAACGTTTTTAGATTCTGTTTCCAGTAGGTTTAcaaactgacggta
tgtgcggcggaaaaacagcttttagaatcgcacccttacagtgcaccaaa
aaatcaatgaaattcgtacccttacagtgcatttttctcaaattttcaaa
tctttttgagtaaaaaattagaattttcttgcaaaaatttggaatttttc
ctgaatttgcaaaaatttccaccccTACAGTGTATTTCTGctatatcaaa
aaatataatcttaACCGCCACATATACTCGCTGTTCATATAGTTCGTTCC
GTTGGTCTTTTATTCCCTGAAACCTTTCTTGCTTTATTTATATTCATTAG
AttccaatttctttttcataagTATCGATTTTTAATTCTCTATCAGTAGC
TCTTCTCTTTGTACCTGGCTTGTTTATAGAGCAGATTTTCTCACACCAAC
CCCAACAACTAATGAACACTAACAAGGGCATAagcggttttagaccatgt
cgaacttatcagaggaaAAGATTTGTAATTGNCGAAAAGTGtaaaagaac
gtcaaaaatgggTAATTAAAATGTTGTGACAATAGACAGTGTTGTCGCGG
CATTTTGAGAAAGAGAGATTTTTTTCCATACATCACACTCTTCACAGATA
GANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
tcaccaaaataaaatttttaattgttgTTTTACAAATTCCCGCTCTGGTA
TGTTTTATTACCCAGTGGAAACATTAATGACATCGTTAAAAACGTGCAAA
TCAgaacaaaagagaaagagagaggaCAAATTTAATTACctgtttttgat
gcatttttgCTCTTTTTGATAAGTAATTTTGAGCTTCAAATAGCAATAtc
tcaaaaagttttatttcaaatttaatgaatgatacctcaaaatttaagtt
agactatcctctttctaataaaagtggttttgagtttcaaaaagactttg
ctcGGTCCCNNTGTCTTAAATTCGCCAGTGAAGGGCTCTTATTAATTAGA
GCCTCGTCCAGCAGGAACGCCTGTGACAACAGGTTTCCTGTCTAGACAGA
GATCATGCTTTCTTGTTGTATCAATTacttaatttgatttttttNCAGGA
ACGCCTGTGACAACAGGTTTCCTGTCTAGACAGAGATCATGCTTTCTTGT
TGTATCAATtactttatttgatttttttgtttattttagccAATGTCTAT
CCAGGAAAGGTGCTGACCATAATTTGTATTACCATGGTTACAGTGTTGCT
GATGAAATTCTTACGGTAACCGATTTTGGATtggagagaaaatatttttg
taattaataTGTAAAAACGATATTTTTCTTAGTTTTCCACTATTTTAAGT
TTTCGGTTCCTTTATtcattttagttttattttcaaaattttagtatttc
aatattatttaaagaaagaatttttaaattttatttttgaaaattttgta
acTCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013486XLOC_013486Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024003-exon-sc0000470-1491911889:191702..191930TCONS_00024003-exon-sc0000470-1491911889:191702..191930Clytia hemisphaericaexon
TCONS_00024003-exon-sc0000470-1510915933:191702..191930TCONS_00024003-exon-sc0000470-1510915933:191702..191930Clytia hemisphaericaexon
TCONS_00024003-exon-sc0000470-1575043694:191702..191930TCONS_00024003-exon-sc0000470-1575043694:191702..191930Clytia hemisphaericaexon
TCONS_00024003-exon-sc0000470-1491911889:192788..192904TCONS_00024003-exon-sc0000470-1491911889:192788..192904Clytia hemisphaericaexon
TCONS_00024003-exon-sc0000470-1510915933:192788..192904TCONS_00024003-exon-sc0000470-1510915933:192788..192904Clytia hemisphaericaexon
TCONS_00024003-exon-sc0000470-1575043694:192788..192904TCONS_00024003-exon-sc0000470-1575043694:192788..192904Clytia hemisphaericaexon
TCONS_00024003-exon-sc0000470-1491911889:193434..193575TCONS_00024003-exon-sc0000470-1491911889:193434..193575Clytia hemisphaericaexon
TCONS_00024003-exon-sc0000470-1510915933:193434..193575TCONS_00024003-exon-sc0000470-1510915933:193434..193575Clytia hemisphaericaexon
TCONS_00024003-exon-sc0000470-1575043694:193434..193575TCONS_00024003-exon-sc0000470-1575043694:193434..193575Clytia hemisphaericaexon
TCONS_00024003-exon-sc0000470-1491911889:194334..194733TCONS_00024003-exon-sc0000470-1491911889:194334..194733Clytia hemisphaericaexon
TCONS_00024003-exon-sc0000470-1510915933:194334..194733TCONS_00024003-exon-sc0000470-1510915933:194334..194733Clytia hemisphaericaexon
TCONS_00024003-exon-sc0000470-1575043694:194334..194733TCONS_00024003-exon-sc0000470-1575043694:194334..194733Clytia hemisphaericaexon
TCONS_00024003-exon-sc0000470-1491911889:195418..195604TCONS_00024003-exon-sc0000470-1491911889:195418..195604Clytia hemisphaericaexon
TCONS_00024003-exon-sc0000470-1510915933:195418..195604TCONS_00024003-exon-sc0000470-1510915933:195418..195604Clytia hemisphaericaexon
TCONS_00024003-exon-sc0000470-1575043694:195418..195604TCONS_00024003-exon-sc0000470-1575043694:195418..195604Clytia hemisphaericaexon
TCONS_00024003-exon-sc0000470-1491911889:196154..196303TCONS_00024003-exon-sc0000470-1491911889:196154..196303Clytia hemisphaericaexon
TCONS_00024003-exon-sc0000470-1510915933:196154..196303TCONS_00024003-exon-sc0000470-1510915933:196154..196303Clytia hemisphaericaexon
TCONS_00024003-exon-sc0000470-1575043694:196154..196303TCONS_00024003-exon-sc0000470-1575043694:196154..196303Clytia hemisphaericaexon
TCONS_00024003-exon-sc0000470-1491911889:197928..198195TCONS_00024003-exon-sc0000470-1491911889:197928..198195Clytia hemisphaericaexon
TCONS_00024003-exon-sc0000470-1510915933:197928..198195TCONS_00024003-exon-sc0000470-1510915933:197928..198195Clytia hemisphaericaexon
TCONS_00024003-exon-sc0000470-1575043694:197928..198195TCONS_00024003-exon-sc0000470-1575043694:197928..198195Clytia hemisphaericaexon
TCONS_00024003-exon-sc0000470-1491911889:199006..199402TCONS_00024003-exon-sc0000470-1491911889:199006..199402Clytia hemisphaericaexon
TCONS_00024003-exon-sc0000470-1510915933:199006..199402TCONS_00024003-exon-sc0000470-1510915933:199006..199402Clytia hemisphaericaexon
TCONS_00024003-exon-sc0000470-1575043694:199006..199402TCONS_00024003-exon-sc0000470-1575043694:199006..199402Clytia hemisphaericaexon
TCONS_00024003-exon-sc0000470-1491911889:200570..200849TCONS_00024003-exon-sc0000470-1491911889:200570..200849Clytia hemisphaericaexon
TCONS_00024003-exon-sc0000470-1510915933:200570..200849TCONS_00024003-exon-sc0000470-1510915933:200570..200849Clytia hemisphaericaexon
TCONS_00024003-exon-sc0000470-1575043694:200570..200849TCONS_00024003-exon-sc0000470-1575043694:200570..200849Clytia hemisphaericaexon
TCONS_00024003-exon-sc0000470-1491911889:202191..202457TCONS_00024003-exon-sc0000470-1491911889:202191..202457Clytia hemisphaericaexon
TCONS_00024003-exon-sc0000470-1510915933:202191..202457TCONS_00024003-exon-sc0000470-1510915933:202191..202457Clytia hemisphaericaexon
TCONS_00024003-exon-sc0000470-1575043694:202191..202457TCONS_00024003-exon-sc0000470-1575043694:202191..202457Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000470supercontigsc0000470:191702..202457 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0577569	0.0450737	0.0352781	0.0107369	0	0.0761473	0.106932	0	0	0.0600062	0	0	0	0	0	0.155177	0.182268	0.0338542	0.0974216	0.0286326	0	0.101865	0.06174	0	0	0	0	0.106044	0.180069
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024003 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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