TCONS_00024042 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024042
Unique NameTCONS_00024042
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3847

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024042 ID=TCONS_00024042|Name=TCONS_00024042|organism=Clytia hemisphaerica|type=transcript|length=3847bp
ATATCTGATATAACGTTTCATGTTCGCTTGAGAGTAAATTGTTGAATGTG
TTTTTCCATGCTTTAAAGTGCAATATTATCGTGGCCAAAGAAATTGTGCC
TTATGACATTGAGATTGATGAAAAAGTTGCCAGGAAAGAATTTGGTGATA
CGTTCAATGAATATTTGGTTTACTTTCCTCCAAATTCTTCCTTCGATAAC
GTTAAGCCATGAATAGCAACGGCAACAACACCACAACCCGTCACTCAAAA
GAGGAGAACGCTTCAATGGACTTATTCGAAGATGTCTTGCTAAAGATCAC
CAAAGAACTCAACAAAcaacaattcaaaaaattgaaacattccCTTATGG
GACACATGGATCAAAATCTTCTCAATAAGATACGAAACTCTAAAGAACTC
ATTTTCTATCTCCGAATTAACCGGTTATTGTGTCGCAAAAAATTAGCGTT
CTTCAGGAAACTTTTGATGGATATACCTGGCTGTCAGAGATGTCTTAAAT
GGATTGATAATTATAGGAAAATTTTCTCTCAACAAAAGCTGGTCTTTGAG
AAAGAAATGATGAAAACTTTAGATGAGATAGATGAGTTGAGAATTATTGA
GAATCGACAAATGATGTCTGAACAACAATATCAAGCACTTCTTGATCGCC
ATGAAATCAAATACAACCAACTAAAATCGTTGAAGGATGAAATCATCAAA
GAACTTAATACCATCGATGAAACAAGTGAAGATTTGAAACTCACAAAGAA
AACGCGACTGGCGAAATATCGAGAGgctcaaaaaactttaaacgCCAAAC
AGGATGCACTTAGCCAAGAAAAAGATCACCTTCTGCAGTTGAAAGAGCAA
TGTCAAGAGTTaaataacaagctagatgctttCAAAGTTAACCAGAATTT
AAAAGGGGAGTTACGTTTGAACGCTTTTCAACGTACGTTAGAGCGTGACG
AAATGAACGCCGTCAAGCGTGCTATCAAGGATAAACGTCACGTGATCTTG
GAACAAAAACAAGTAGTCATGAAAAGTGAAGAAGATATGGACGAATTAGT
GAAAAATGTCGATTTCAGGTGTCAACTAATTGTCAATCAATGTTAGAAAT
TGAACTGGAGCTTGTGAAGACAAGAGAAGCTTTGAGAGAAAAGAATTCGT
TTATCGAAGAAGCTGATGATGTTGCATATCCAACAAACAACAGTAATGAT
GAAACTGGTGAATTGCCAACTGGATTTGTTGATGAAAAACGGAGATTgAA
AATCGATTACGACATGCTTGgttcaaaaatatattcaattggAAATGAAG
TCAAAAATGATCTCCAAGAAAGCGCCAAAACAAAACTGAATCAACCTTTC
TTCATTGCGGTCGACCAAAATGGAAATCTCGTTGTGATGGATGGATGTAA
TAAAACAGGATATCGGATTGTTAATATCGGATTTAACGGggaaacaaatt
ttgaaataggGTTAGATACTTTAGAGCCTGTTGACTTGGCAATAGATCTC
GAAAATTGTTACTATGTCACCGGGCGTCGGATTATACGGAAATATCAACA
AACGGAACTGGTCTTACAGTTTGTACCACATTATCTTGGCAGGACGATGG
ATTTACCAGAGATATCGTGCATCAAGTTCAATGTTCACACATCAGAATTA
TATCTTTTGGATAAGGTCAATAAGGGAATACACGTCTATGATTTGGAGGG
ACATTACAAAAACATGGTTGATTTATCAGAGTATGTCGTCACTCCATCCA
AATTCACCATCCAAGATGAATCAAACATCTTAGTGACTGATTGTGGTGAA
CACAGTGTTCATATGTATAGAATATCCGCTTGCAATGTTTTAGAATGTCA
AACTGTTGGATCGTTGGGGATTGGCGATGGTGAATTTGTTCAGCCCACTG
CTATTTTTTTTGACGATGGTTCATTCACTAGCCTTGATCAAAATGAAAAG
TCTGTAGTTGCAGAACTGGAAACTGAGAAATCCAAATCTTGTCAATTCGT
ATCAATGGATGCAACCCGTCTCAGAAGAAATGCTTCAGATATGAGCTTAA
ATGGATTCGATGTATCAGACTTTTCTTTGGAATCACTTGATATCCATGAT
TTAGATcttgttgaagaattgaaaaaagcaCAAGCTAATTTTGATTCTGT
GGTCAAAGATGATTCAACAACCGTTGATGCTGGAGCTGGAATCGAGCCTC
ATAATAAATGCACGGCCATTGATGCTGGTGAAAACAGCTGCGATGATTCT
TCTGATGAACCTGATGGCGTAACTGACCAAGTTTCTCGGCATATTATTGT
CTGTGACACTGGTAATCACCGAATATGTGTATTGAAAGAAAATGGTGATT
TTCGAACTTCGTTTGGACGCCATGGAACATCTCTGAGGTCGTTTAAATGT
CCAAATGATGTTTGTGTTTTTAACGGATTATTGTTGGTAGCTGATAAGGA
TAATGACCgcgttttaattttcttttcgtgaaatttaatgttttgtaCCT
ATTTGggagggacaagctggagtttttacaagctcttatttgatttggtt
ggtcgttaaccagtaataaaacaattttgttacttgttctaaagaacgcg
tcatcgctatcacttcaaatgaccaattagtgaagtatcttgtaaaaact
ctagCTCATCCCATTTGGGAAGAATCAAAATATCGAATTTTCTTTGTATA
GCTAAAAAATTCACCGAGAATTATCCTGGCTTTGGGATCGTTCCCAGGTg
gaaatgatagaatgatattAAAATGATATATTCTGAGTATTGTTTCACCG
GGAGAACTCTTTTGGTAGAGTTTCATGTCTGTgttacagacccgctggga
gcccagccccactggaaaatttggtccccagtgggaaaataccctgaaat
gtcagccccactgggaaattgactttgatttcatccccatttgaaattca
atgtttaagagttgcactccaaacccatcCCCAATGAACTTTCTAACCCC
Atttggatttcaataggaagttttatccccactgaggaaaaaagtttcac
cggggctttgagacaggggtgctaAGATGGAGGTGCCAATGGATGTGGGA
AGCTAATTTCCATATCACCAACTCCAGCGAATGTAAAGGCTTTTTAagaa
tgaattttaagttttatttctaaaaaCATGTACATTAATAATATTTACAT
CAACCAAGAAAGATAATATTGTCCCGTAAAATCTATATAATTTGTCAAAA
AGATAAAATAGTATGAAAAAACTCAAATATAGAAATAAAGTTTGAATGTC
ACGATATTCTACAATGAACTGAACATAACAGAAACCTTAAACTACCACGT
ATTTCCTAGAAAAATAATCCGCTTTTCATGGTCAATTTTCTTTCACTCAA
TATGAGTGACTTTCAATCAACAACtactgtttttaattttcaatcacTGA
TGCGAGTAATTGAACCTTGGTCCTGTAAAACCTCCCATGTCATAATCAGA
ACCATCAGATAGTGGTCTTTTAGCAGCTGCTTTCTCCAGACGTTCAAGCA
TTTCCAGGTGGATATTCAATGGTGATATAGATGTTCGTTTTGTGGTGGAA
ACTTCTTGTAAACTTGCATATCTTTTCTCATGCTTGGTATCGGCTTCAAG
TAAAAGTTCATTTATATCTTTTGGTATTGTAGTTGATCTTGAAGGCATTT
TTCGATTGTTTAAGAGGAATGGTGAATGTTGGTGTTGGCTACGCATGGCA
CCGACATCGATGGAGTTTCGATACCGTGATGGAGGTGGAGTGTAGCTCTG
GTATGAAATAGACGATCGATTGGATGAGATACTAGCAGTttctgaaa
Run BLAST on NCBI

transcript from alignment at sc0000471:56399..65160+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024042 ID=TCONS_00024042|Name=TCONS_00024042|organism=Clytia hemisphaerica|type=transcript|length=8762bp|location=Sequence derived from alignment at sc0000471:56399..65160+ (Clytia hemisphaerica)
ATATCTGATATAACGTTTCATGTTCGCTTGAGAGTAAATTGTTGAATGTG
TTTTTCCATGCTTTAAAGGTTTGATCTTTACTTTTACTGGTACTTTTTAC
CAGAAtagttttttattagaacccagtatctaagaacattttggctgaaa
ttgaAAGGGGAAAAAGCGAAATAAGCTTAAAATTGCCTGAAATGATAAGA
AACTTTCgtaataatcattttttttttcaactatAGTGCAATATTATCGT
GGCCAAAGAAATTGTGCCTTATGACATTGAGATTGATGAAAAAGTTGCCA
GGAAAGAATTTGGTGATACGTTCAATGAATATTTGGTTTACTTTCCTCCA
AATTCTTCCTTCGATAACGTTAAGCCATGAATAGCAACGGCAACAACACC
ACAACCCGTCACTCAAAAGAGGAGAACGCTTCAATGGACTTATTCGAAGA
TGTCTTGCTAAAGATCACCAAAGAACTCAACAAAcaacaattcaaaaaat
tgaaacattccCTTATGGGACACATGGATCAAAATCTTCTCAATAAGATA
CGAAACTCTAAAGAACTCATTTTCTATCTCCGAATTAACCGGTTATTGTG
TCGCAAAAAATTAGCGTTCTTCAGGAAACTTTTGATGGATATACCTGGCT
GTCAGAGATGTCTTAAATGGATTGATAATTATAGGAAAATTTTCTCTCAA
CAAAAGCTGGTCTTTGGTAAGACCttaatttgtgtttttcctttaaatca
agacaaaaaaattcatttaaacacCCGCCCTGTcttacagccccggtgga
acctttttctTCAGTAGGGATAACAATTTCCATCgtaatcccaatgggga
ttgaaattctattgttccaaggttaaaaatccagtggggaatagacaatt
tcaaatggggatgaagtcaaggtcaatttcccagtggggctgaaattcta
gggtattttcttaccggggacgaaatttttgccatcttcttttttttatc
aagCACGAAATCgaacttaaccctttaagttcCAGTGTCGTaaatatcag
acatgggctatcctgtaatgcccagtttgaaatcgaaattcgttattttt
ggtctaactcgtaggaattggattgggcttcatggtcaagcaaaaaaaaa
agcaatagtgagtctttccagcgagattttaagtcaataatttgacaaaa
atccactttttttaagattttgaccgttttttgaccatttttggtcaacg
agtgatccaagaacctccaaatttggccctgttttacttgattctgtccc
ctagcgaattaatttgaagttttaccactgggcacctttctattATTCAG
GTACGTCCgtgagactctaagctatccaacgaactataaacgagcttcta
actccttctagattcGGAGATGTAAGCCTTTTAAAATCTGAACTagtgat
tttctttaaaaacttagAAACAAATGACCGttgcacttaaagggttaata
taACAGTAGGAGATGTCAGCCTGATATAAAATACGTGTCTGATATAAAAC
AGGAGCACTTGtgtaaaactaaaacctttaaattcttAATTTCAGAGAAA
GAAATGATGAAAACTTTAGATGAGATAGATGAGTTGAGAATTATTGAGAA
TCGACAAATGATGTCTGAACAACAATATCAAGCACTTCTTGATCGCCATG
AAATCAAATACAACCAACTAAAATCGTTGAAGGATGAAATCATCAAAGAA
CTTAATACCATCGATGAGTAAGATATAATTTGTCattgcatacacgtttt
ttataagaacatcgaatattttttaagccttggaattttcttaacttttt
gagttttaagtataaaaatgttcttaacatgttcttattttcgcgatttt
ttgagtattttgtctatcttcctaagaaattgggtgttctaGAGCCCACa
gagccttgaaatgttcttaatttgttcttaacattttaaccgtcaaagcc
ttatgttcttatatagtttgttcttataaaaaaacgtgtagttagTATGT
ACCAATTGGTAATAATAAGATGTCTTCAAAATGACCCTTGGGttgcactt
aggcaaaatgggtaaATGAACTCCATAAGGGAGCTAAATATGTTGAAAAT
TGAGTATGACTTACCTTGTTCTTTAAACCACAACCGTTCATGCTATGAAT
ACACGCTTTCTTTCATAAGAACAACAAGACTCAAAAACGTTGAAGAATAA
GAATAGCCCGAATAACTAGATTTTAGATAAATTTAGTTTCAAAGTAATAG
AAAAAGGATATGTTGtcctgaaaataagaacaggataggATAATGAGAAC
TAATTAAGGATTTGAGTGACAAAAACTCACTGGTTATAATAAAAGAAGAC
ACAAGCATTTCGTCATCATATAGCTGTCGTAGATTAATGTTTAGAGACAT
CTTCAAATTGTTTTGATTACGATTCtaaattcgaaaaattcaaCGCTCTT
GTCTCCTTACCTTAAATTGCAGAACAAGTGAAGATTTGAAACTCACAAAG
AAAACGCGACTGGCGAAATATCGAGAGgctcaaaaaactttaaacgCCAA
ACAGGATGCACTTAGCCAAGAAAAAGATCACCTTCTGCAGTTGAAAGAGC
AATGTCAAGAGTTaaataacaagctagatgctttCAAAGTTAACCAGAAT
TTAAAAGGTATCTATTACAATTATTTCTGgggaaatcgaaaatttacaGT
TGttaaggccggcgcaaatgGAGCCAACATTTGACGtaacatttaacaaa
aaatgttggtttgaaTGTTGGCTTCTTTGCGCCGGCCTTTAACCTCGTTG
ATATCCATGGGCTATATGTAGCACTGTTTTTACCACCTAGAAAGCACCTA
TGTTGAGGAAGGTTATATTTTGGAAATTCACTATtgattttggccaaaat
ttcagACACTCGATTTTTTGGCAAACTATATCCACGTTATTTCACCCCCG
TTGGGACAGAAAAAATAATCTCCtcgaggcgaaaataaaaaaatatagtg
tttccggaatgcgggtgaaggaaaaaagctacCATGCGGCCGTCCGTGAA
ATAGagctttaaagataacttttatgtaaaaACAGTAAGTAAGCCCTAAA
TACTAATATATGAACGAGTCTGCGACCGGttcagaaaaaatcttttttca
cccggccggtttccggaaacactgcattttttttatttttgcccgACATA
AATTCTGGAATTTACTCTATACTCCTTTGGAGCCGAGATTTTGTATTAAG
CCAATGAAAGGTTTTAAGTTCAAAGATGATTCAAACAATAACATAACCTA
TTACTAAATCCTTTCCAGGGGAGTTACGTTTGAACGCTTTTCAACGTACG
TTAGAGCGTGACGAAATGAACGCCGTCAAGCGTGCTATCAAGGATAAACG
TCACGTGATCTTGGAACAAAAACAAGTAGTCATGAAAAGTGAAGAAGATA
TGGACGAATTAGTGAAAAATGTCGATTTCAGGTAAACGgttttgtataaa
aattgataaaatttctgatacaatttttcgtgattttagGATTAAAGGCG
TAGCGAGacaccctgcaaaatttatggatgagagcggtttttacgacact
gtaatttatgtctttgttttatcaaaagatcatgaatatgtcataaacgt
ttgcactccctcataaattttgcagggtatctcgctacgcctatgtgAAT
TCTGTTATGATCCATACTTAATACAAACATTGGCTTAAAAGGGCTTGAAT
TTAACATTTACTTGaacttttctaaaatttgaagcTTAGATTGAATTTGT
TTTGTGGATTTCACGTCTTTTTTGAAAGAACATATGACAAATATGAACAA
ACTGGAACTAATATCAGCTCAATCTCACAATGAAAGCAACTTGCACGATT
TCGCGATTTGGTTTCTCTTATGCATGGTTATTGTATTACGCAAGTGGGAC
CGTGgctccattttttgaaaatgataggGCTATGATATACTGTCTACAGA
GTTGACCACAACCTCCCCCTCCTCCCTGCTGCCTCGCCTCTTGACAATAT
TTTAAGGCTAAGCCTTCAATTTAAGGaaaactaccttatcggccaaaact
tagtcgaccctaagtgactaaattttgccTTAAAtaactaaaattagggc
cgactaaaaatgtgtgccgactaaaattaaggccgactaagttttggccg
ataaggtatgctCAATCTGTGGATACTTATTTTCAGGAGAGGCAAAGTAC
GCGAAATACTTGCGAAAGTACGGTGCATCCACACCGAACACGCTAATGTA
TATGAAAAGTTGGAAGATATCGAGAAGAAGATCTTAAACATCAAAAATAA
AGTAAGTTTTTGTGGGTTTGCTTTCAAATTTCATCCTAAAGAAAAAGACT
ACCCTGTAGCACGTCCATAGATaatcattcaaattcaaaacgtAAAAACT
AATTCGGATTatggagtttctaaacatcgacccgAAATGGCGACCGccac
cggcgaccagataaatttgggttatcgattttttccttttctccAACGTA
GAATGTCTCTCCTTATCATTTGAATATATcatattgaagagtaagctcac
CTCTGTCTCATCTATTTAGAGCCGCGTGCCCAATGCGTAAAACAACCACt
tcgacgctcttggagcttgattatggtgacttttgtattatcagcatcaa
aataattagcggcgcaaaactttttgaaattggtttgagaagctttgtat
ttcatcataagattgttatttctgtcaaaattaatcattttgtcagcata
aagacaatagaatattGGATTAGATctatatctctaaaactggccttcac
aattttttcctactgacaagttctatctattcacactaaaggcatctcat
tcagcaAGATAGAAATATCCGGGTAATAAAGCTTACAGACATACTTAATA
TCtttgtcaaatagtgtcactttgtctagcAAATGACTGattacttcaaa
ggtcactttttagtattccgAGGACTTGATTTAGACAtctctctacggtg
gagagagcagataaactcgataatccaagtttatctggtcgctggtcgaT
GTTTACAAACTCCCTTATGAATAACAGTAGTTTGGATTAGACTTTCCATT
AAAGAATGGTAATTTTCCACCCCATTGATAATTTTGTTTCAACCCTATTA
GCCAAAAAAATCTCTGCGGGTCATACAGAGACTGGCGTATCGTCTCTAGG
TCCTTCATAAACTGCATGTCGTTTTTATAGGTGTCAACTAATTGTCAATC
AATGTTAGAAATTGAACTGGAGCTTGTGAAGACAAGAGAAGCTTTGAGAG
AAAAGAATTCGTTTATCGAAGAAGCTGATGATGTTGCATATCCAACAAAC
AACAGTAATGATGAAACTGGTGAATTGCCAACTGGATTTGTTGATGAAAA
ACGGAGATTggtaattttatttatttttttatgagaaagcattcctttgt
cttttttgtcTCGACCTGCGGTACTCAAGGTACTAGAAGGTTTGATCCAA
GATTTCTATTTTTTCTGCCAAATCATTTGGCACTGAGGGTGCAAGcaaga
acattttttttgactgtatcaAAAATTCAGATtcgaaaatctcaaaattt
acaaaaatcttGATAACTTTAGAGGAATAAAGACCTAATTGGGAAATTTT
GCAGGATAGGAGTTGGTATTGATTCAAACGGTCCTGAAAGATCATATTTT
AGAATTAAGAGTACAATATggtgtttttggtcattttgacTATTTGCTCC
TGTGTTATCAGTTTCTTGTTATTGTCTATCATTACTAGTTGAGCAATATC
AGTTACTTAGGACTATATTTGACGTTAGcgacaataaaacaaaagcaATT
GGTAAAGCAATTGGTGGCAGNGCTTTACTTAGGACTATATTTGACGTTAG
cgacaataaaacaaaagcaATTGGTAAAGCAATTGGTGGCAGTGGCGCTA
AATTTTGAGGGCGGGTGGCGAGCTTTTTTCTTGACAATTTCTTTCATTCT
TTTGCTTGCTGGTacgcttttcttttttcaaactaaatacaaattcttct
tctttttatacaGAAAATCGATTACGACATGCTTGgttcaaaaatatatt
caattggAAATGAAGTCAAAAATGATCTCCAAGAAAGCGCCAAAACAAAA
CTGAATCAACCTTTCTTCATTGCGGTCGACCAAAATGGAAATCTCGTTGT
GATGGATGGATGTAATAAAACAGGATATCGGATTGTTAATATCGGATTTA
ACGGggaaacaaattttgaaataggGTTAGATACTTTAGAGCCTGTTGAC
TTGGCAATAGATCTCGAAAATTGTTACTATGTCACCGGGCGTCGGATTAT
ACGGAAATATCAACAAACGGAACTGGTCTTACAGTTTGTACCACATTATC
TTGGCAGGACGATGGATTTACCAGAGATATCGTGCATCAAGTTCAATGTT
CACACATCAGAATTATATCTTTTGGATAAGGTCAATAAGGGAATACACGT
CTATGATTTGGAGGGACATTACAAAAACATGGTTGATTTATCAGAGTATG
TCGTCACTCCATCCAAATTCACCATCCAAGATGAATCAAACATCTTAGTG
ACTGATTGTGGTGAACACAGTGTTCATATGTATAGAATATCCGCTTGCAA
TGTTTTAGAATGTCAAACTGTTGGATCGTTGGGGATTGGCGATGGTGAAT
TTGTTCAGCCCACTGCTATTTTTTTTGACGATGGTTCATTCACTAGCCTT
GATCAAAATGAAAAGTCTGTAGTTGCAGAACTGGAAACTGAGAAATCCAA
ATCTTGTCAATTCGTATCAATGGATGCAACCCGTCTCAGAAGAAATGCTT
CAGATATGAGCTTAAATGGATTCGATGTATCAGACTTTTCTTTGGAATCA
CTTGATATCCATGATTTAGATcttgttgaagaattgaaaaaagcaCAAGC
TAATTTTGATTCTGTGGTCAAAGATGATTCAACAACCGTTGATGCTGGAG
CTGGAATCGAGCCTCATAATAAATGCACGGCCATTGATGCTGGTGAAAAC
AGCTGCGATGATTCTTCTGATGAACCTGATGGCGTAACTGACCAAGTTTC
TCGGCATATTATTGTCTGTGACACTGGTAATCACCGAATATGTGTATTGA
AAGAAAATGGTGATTTTCGAACTTCGTTTGGACGCCATGGAACATCTCTG
AGGTCGTTTAAATGTCCAAATGATGTTTGTGTTTTTAACGGATTATTGTT
GGTAGCTGATAAGGATAATGACCgcgttttaattttcttttcgtgaaatt
taatgttttgtaCCTATTTGggagggacaagctggagtttttacaagctc
ttatttgatttggttggtcgttaaccagtaataaaacaattttgttactt
gttctaaagaacgcgtcatcgctatcacttcaaatgaccaattagtgaag
tatcttgtaaaaactctagCTCATCCCATTTGGGAAGAATCAAAATATCG
AATTTTCTTTGTATAGCTAAAAAATTCACCGAGAATTATCCTGGCTTTGG
GATCGTTCCCAGGTggaaatgatagaatgatattAAAATGATATATTCTG
AGTATTGTTTCACCGGGAGAACTCTTTTGGTAGAGTTTCATGTCTGTgtt
acagacccgctgggagcccagccccactggaaaatttggtccccagtggg
aaaataccctgaaatgtcagccccactgggaaattgactttgatttcatc
cccatttgaaattcaatgtttaagagttgcactccaaacccatcCCCAAT
GAACTTTCTAACCCCAtttggatttcaataggaagttttatccccactga
ggaaaaaagtttcaccggggctttgagacaggggtgctaAGATGGAGGTG
CCAATGGATGTGGGAAGCTAATTTCCATATCACCAACTCCAGCGAATGTA
AAGGCTTTTTAagaatgaattttaagttttatttctaaaaaCATGTACAT
TAATAATATTTACATCAACCAAGAAAGATAATATTGTCCCGTAAAATCTA
TATAATTTGTCAAAAAGATAAAATAGTATGAAAAAACTCAAATATAGAAA
TAAAGTTTGAATGTCACGATATTCTACAATGAACTGAACATAACAGAAAC
CTTAAACTACCACGTATTTCCTAGAAAAATAATCCGCTTTTCATGGTCAA
TTTTCTTTCACTCAATATGAGTGACTTTCAATCAACAACtactgttttta
attttcaatcacTGATGCGAGTAATTGAACCTTGGTCCTGTAAAACCTCC
CATGTCATAATCAGAACCATCAGATAGTGGTCTTTTAGCAGCTGCTTTCT
CCAGACGTTCAAGCATTTCCAGGTGGATATTCAATGGTGATATAGATGTT
CGTTTTGTGGTGGAAACTTCTTGTAAACTTGCATATCTTTTCTCATGCTT
GGTATCGGCTTCAAGTAAAAGTTCATTTATATCTTTTGGTATTGTAGTTG
ATCTTGAAGGCATTTTTCGATTGTTTAAGAGGAATGGTGAATGTTGGTGT
TGGCTACGCATGGCACCGACATCGATGGAGTTTCGATACCGTGATGGAGG
TGGAGTGTAGCTCTGGTATGAAATAGACGATCGATTGGATGAGATACTAG
CAGTttctgaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013503XLOC_013503Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024042-exon-sc0000471-1491911889:56399..56466TCONS_00024042-exon-sc0000471-1491911889:56399..56466Clytia hemisphaericaexon
TCONS_00024042-exon-sc0000471-1510915933:56399..56466TCONS_00024042-exon-sc0000471-1510915933:56399..56466Clytia hemisphaericaexon
TCONS_00024042-exon-sc0000471-1575043694:56399..56466TCONS_00024042-exon-sc0000471-1575043694:56399..56466Clytia hemisphaericaexon
TCONS_00024042-exon-sc0000471-1491911889:56635..57114TCONS_00024042-exon-sc0000471-1491911889:56635..57114Clytia hemisphaericaexon
TCONS_00024042-exon-sc0000471-1510915933:56635..57114TCONS_00024042-exon-sc0000471-1510915933:56635..57114Clytia hemisphaericaexon
TCONS_00024042-exon-sc0000471-1575043694:56635..57114TCONS_00024042-exon-sc0000471-1575043694:56635..57114Clytia hemisphaericaexon
TCONS_00024042-exon-sc0000471-1491911889:57994..58165TCONS_00024042-exon-sc0000471-1491911889:57994..58165Clytia hemisphaericaexon
TCONS_00024042-exon-sc0000471-1510915933:57994..58165TCONS_00024042-exon-sc0000471-1510915933:57994..58165Clytia hemisphaericaexon
TCONS_00024042-exon-sc0000471-1575043694:57994..58165TCONS_00024042-exon-sc0000471-1575043694:57994..58165Clytia hemisphaericaexon
TCONS_00024042-exon-sc0000471-1491911889:58921..59105TCONS_00024042-exon-sc0000471-1491911889:58921..59105Clytia hemisphaericaexon
TCONS_00024042-exon-sc0000471-1510915933:58921..59105TCONS_00024042-exon-sc0000471-1510915933:58921..59105Clytia hemisphaericaexon
TCONS_00024042-exon-sc0000471-1575043694:58921..59105TCONS_00024042-exon-sc0000471-1575043694:58921..59105Clytia hemisphaericaexon
TCONS_00024042-exon-sc0000471-1491911889:59767..59929TCONS_00024042-exon-sc0000471-1491911889:59767..59929Clytia hemisphaericaexon
TCONS_00024042-exon-sc0000471-1510915933:59767..59929TCONS_00024042-exon-sc0000471-1510915933:59767..59929Clytia hemisphaericaexon
TCONS_00024042-exon-sc0000471-1575043694:59767..59929TCONS_00024042-exon-sc0000471-1575043694:59767..59929Clytia hemisphaericaexon
TCONS_00024042-exon-sc0000471-1491911889:61729..61908TCONS_00024042-exon-sc0000471-1491911889:61729..61908Clytia hemisphaericaexon
TCONS_00024042-exon-sc0000471-1510915933:61729..61908TCONS_00024042-exon-sc0000471-1510915933:61729..61908Clytia hemisphaericaexon
TCONS_00024042-exon-sc0000471-1575043694:61729..61908TCONS_00024042-exon-sc0000471-1575043694:61729..61908Clytia hemisphaericaexon
TCONS_00024042-exon-sc0000471-1491911889:62562..65160TCONS_00024042-exon-sc0000471-1491911889:62562..65160Clytia hemisphaericaexon
TCONS_00024042-exon-sc0000471-1510915933:62562..65160TCONS_00024042-exon-sc0000471-1510915933:62562..65160Clytia hemisphaericaexon
TCONS_00024042-exon-sc0000471-1575043694:62562..65160TCONS_00024042-exon-sc0000471-1575043694:62562..65160Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000471supercontigsc0000471:56399..65160 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0742546	0.0821863	0	0	4.52943	3.93843	0.399885	2.44661	1.0703	1.96007	0.58064	1.67232	0	0	0.0578686	0	0.0200874	0	0	0.0985525	0.0587073	0.199738	0	0	0	0	1.88137	1.06262	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024042 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top