TCONS_00024167 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024167
Unique NameTCONS_00024167
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2211

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024167 ID=TCONS_00024167|Name=TCONS_00024167|organism=Clytia hemisphaerica|type=transcript|length=2211bp
TACAGGATAAAATATCAAAGATACAAATGATCGATAGTTTTTTAACTAAT
TGTAATGGCTGAAAATATAAGGACTTCACTTACTAATTTGGCAAATCAAG
GCCGCTCTCAAAAAGACTCTATTGACAAATATCGAGCACATCTGAATGAG
ATCTTGTCCCTCCAGAATCCTGAGCTCACCGACCTACTGAAATCTTTCCT
AACAACTGCCTTACAAGAGAATGTGAGTGTAGTGGTTTCCAGACAACTTG
TCTCTGATGTTGCAACGGCATTGAAATCTTTGGATGCTACAACCATCAAA
GATGTCTCATATTTTACTCTGaacaatttacagaccagagcaATTTCATT
CGAAGAACAGGTGGTCAACATACGACAACATTTAGCTAACGTTCTACAAG
AAGAAGGTGATTGGAGGAAATCAGCTGAAGCGCTCGTTGGAATACCTCTT
GAAACTGGACAAAAGCAATACAGTAATGCATTCAAGATGGAGATTTATTT
GAACATCGCTCAACTTTATTTGGAAGATGATGATCCAGTGCAAGCTGATA
TTTACATCAATCGTGCATCGCTACTTCAAAAATCGGATGATACCACCGAT
GCTCTCACCATCAAATATAAAGTGTGTTATGCAAGGGTATTGGATTATCG
ACGAAAGTTTTTGGAAGCAGCACAACGCTACAACGAACTTTCATACAACA
CGCTGATCGCAGATTCTGAACGTATTAACGCTTTGAAACATTCTCTCATC
TGCACCATATTGGCTTCCGCTGGGAGACAAAGGTCACGAATGTTGGCAAC
ATTATTCAAAGACGAAAGATGTCAACAACTACCTGCTCACGAGATCTTGG
AGAAAATGTATTTGGATCGTATTATTCGTGGACCTCAATTGAAAGAATTC
TCAGACATGTTATTAGACCACCAGAAAGCAACCACGGCTGATGGCTCAAC
AATTCTTGACCGTGCAGTTGTGGAACACAACCTATTGGCAATCAGCAAGA
TatacaaaaacatttcaatagATCAGCTAGGAATTCTTCTAGAAATCTCT
CAACAAAAGGCGGAGAAAATCGTGTCCAGTATGATTTGCAATAATACAAT
CAAAGGGTTCATTGATCAAGTCGAAGGCTTCGTCTATTTTGAAGCACAAG
AAGTGTTGGAGTCGTTCGATCAGCAAATTCAAAGCGTTTGCTTACATGTC
AATGACGTCATGGACAGAATACAAGAACACGTTCCTGATTGGCAGTTCAA
CATTGCCGACAAATCCATCATCATGGATACTAGTTAGTCTCAGTTACCCA
GATTCAAGTTGTACGAACGGTAACATTCcatgattttgagaaaaaaagat
aaaaggtaTGCGTCTTTTATTCTTTAGATCGATTCATGTCAGAGGTATTG
GTTTTTCGGCTTGTTTTAGAACTACTGGCTCAAGAAtagtttttgttgaa
agtagCCTTTCCATTTCAACCATCGTTCGTTCCATTTATTTTGGATGATC
AAAAATTGgtgacattttttttgaaaatgacatGTTATGTTAGAACACTC
ACTATCGGACATTTTATTACAGAAATACATCACAGCGCTTATAAAAGTTG
CTCTTTATTATTTGGTTGAAATTATTATCTTTTGAGTGGATTATTTTCGC
GTGGAATTTTTGCGAATCTAGAATTTCCGCTGGGATTAAATCGCTTTTTT
CTTATAACGTCTTTCATTTACTAAGGGTTTTGTCAAAAACTAGGATTTTT
TGCGAGGACTCATTTTCGCCAATCGGCtagaaaatcgcgaaaattaatcc
acgcaagGTGCATACCCTATTTTCAACATGATTAATAATTTAATATGATC
TATTTATGGTGAGAAAGGTGTGAAGTTTTAATCATCGGAAATTAAATAAA
TTACAGATAATTTAAGCTATCGGAATCAGCTCAAAAACGTTGCTGTTGAG
AAAACGTCTTATTTTGTATTGAGCGCAGTTTTATTTGAAAGAGTGGAAAT
ACGTGTGAATGCTATGAGCATATGAATGAACTTTGAATTTATATTGACAA
AAGggaaatgaaaattatattttatttaaaattgttttgttttgatagtt
tcatgatttcattaacctttccagcgcgcaactttttaaattttcacgct
gtcagcgcgcaacattttttcagaaaatagacatgttcagttatttgATC
ATAACTCAANN
Run BLAST on NCBI

transcript from alignment at sc0000478:58145..66162+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024167 ID=TCONS_00024167|Name=TCONS_00024167|organism=Clytia hemisphaerica|type=transcript|length=8018bp|location=Sequence derived from alignment at sc0000478:58145..66162+ (Clytia hemisphaerica)
TACAGGATAAAATATCAAAGATACAAATGATCGATAGTTTTTTAACTAAT TGTAATGGCTGAAAATATAAGGACTTCACTTACTAATTTGGCAAATCAAG GCCGCTCTCAAAAAGACTCTATTGACAAATATCGAGCACATCTGAATGAG ATCTTGTCCCTCCAGAATCCTGAGCTCACCGACCTACTGAAATCTTTCCT AACAACTGGTATGTACATTTCGTTGTTCTAACTAAATTAGCAAAATCTTT ATCAATGAGAAACCTGTTATAGACTTATTTTAATCAAACGTAATGGATGA TATAGACAACAAAGTTACTTTTACTTTATTTCATGCAAatgctttttttt aaagttgaaataagttaaaatttattattttttaaatgccATTCATGGAC GAATATACTATTTAAAGTGAGATTTTGATATAATTCAGTTTGATTTAAAC CTAATATAGTGGTTATAACAATACTTTGAGCCACTGCAGTTACCCTTCAG GGTAACTTATCATCAAACTTATAATTACATCAATTCCTTAATAATCCTGG TAACCCTTGGAAAGAAAATCTTTATTGATTTTAACCACATCCTATATAAC CCTTGTTTTTCAAGTACTGGATCAGGCTTCGCATATAATTTATAATAATG ATTTATAGGCATAATTTGTGTTGATTTTCAGCCTTACAAGAGAATGTGAG TGTAGTGGTTTCCAGACAACTTGTCTCTGATGTTGCAACGGCATTGAAAT CTTTGGATGCTACAACCATCAAAGATGTCTCATATTTTACTCTGaacaat ttacagaccagagcaATTTCATTCGAAGAACAGGTAACACAGAAGATAAA CAGTGCTGCCTCGTCAGCTGTTTGCCTCCCGCTGTGATTTATGCAATGCT GCATCATTAATATCCAGTTAGTTGCTCTTTTAATGTGACGTAGCCTTATG CCCACTCGCACAAAGCATTGGAAACTTTCCATGAAAGATATTATAAGata tttaaaaagatattttcatGCTACAAAGCAAGGAGGTGAGCCTCTATACT GACAAAGTAGAATGAACAAAAAGAANGTTTTTATGCTAAAAAGCAAGTAG GTGAGCCTCTATACTGACAAAGtagaataaacaaaaagaatttttccaaa ttcGTGCTTGCACGGCGCCGTAAAGGGGACAAAGTAGTCcctcttttatt tattttatatgtGAGTAAAAACGATAGGAGGATAAAATGTCCATGAATGA CAAGCAGGAAGTGTCAAAATCATTCGGATTCCAGATATTCTAGGTTTAAA TGTTTCACAGGACGCTCAAAAGAAATGGATTTCTTCaaactttctctttt ttcttcgATACAGGTGGTCAACATACGACAACATTTAGCTAACGTTCTAC AAGAAGAAGGTGATTGGAGGAAATCAGCTGAAGCGCTCGTTGGAATACCT CTTGAAACTGGACAAAAGTAAGTTGTTGGTTTGATAACGCAGATAAAGGA CAGCAAAGTATTAAATAAGATTGAAATAATATGGGAGAGTTTTTAGCATG GCTGCAGAGTTTTTTATTCTATTCTTGCAACCAAGATAAATGATACTAAT TTGCGTTGTTGAATATTAATAGATAAATCACCACGAAGCTCGATTTTCTT CTAGCTTTCAAACGCGCCACGGCAGCTTTCTTCAGGCTGATTGATAAGCA AGATAGATTTACCCTGTAGCACCTCCCTTTCTTCCAGAACAAAATACCAG GCGTAAATTTGTTTTAGAAGCAAAGTGAAGTCTAAATTGCTTTCAGATTA GCCTGTAGAGAGTCACCGGGGTGCGAACGAATGATAGAGGCAATTCATCC GTTAAGTCGTGATTTTATGTATCGATACTTAACTTTACTATTACCTCTTT GACAGGCAATACAGTAATGCATTCAAGATGGAGATTTATTTGAACATCGC TCAACTTTATTTGGAAGATGATGATCCAGTGCAAGCTGATATTTACATCA ATCGTGCATCGCTACTTCAAAAATCGGATGATACCACCGATGCTCTCACC ATCAAATATAAAGTATTTTGCTTTTTCGAATAATAATTAACAATGGCTCT TGTTTTACTCCTACATTTATTTCACGAGTAATAATGAAATGGTGTTTGCT GCTTAGAATATTGAATAAAGATTGTTAAATTTTTACAAAGCTTTCAACTT ACTCAAAAATTTAGTCAAACCAAAATTAAATTGATACTTAATAAAGTATA CAAAGTTGCTTTTTTACATCGACCTGCAAACTTATAAGTCTTTGTTTTTC ACAAatgtttaatttgttttttttacaacGACCCCCCCTCCACTCCGGTT TTTTAACGTCAAAATGAAATCGGGTTCAGTGGAATGATGGAATGAGATTT GATCAAGTGAACGTTACAAActttaaagtctttttctttCTAGGTGTGTT ATGCAAGGGTATTGGATTATCGACGAAAGTTTTTGGAAGCAGCACAACGC TACAACGAACTTTCATACAACACGCTGATCGCAGATTCTGAACGTATTAA CGCTTTGAAACATTCTCTCATCTGCACCATATTGGCTTCCGCTGgtaatt taccatttttagaAATTCATATTATTTTGTCTGACAAGCTTTTTCTCCTA ATCAGAAATAAGGCTCAAAATGGAAGAAAGTAGTCTAAGTTATGTTATAA TTCGAACATTTTTGGAACATTtaaaccctgaaaatttcagaaattaagaa cagccctgTCTGAGCTAAAATTTActggattttattaaaaaaaacttaac atGTACATATTTTTTCCACCAGTTAAAGGTTCCCTTCAAAGTAATGCCTC ATGCAAATAAACCCCTTTTCTTCAATCAGCCCTGGAATATTTGACAGTAA ATAGTGATTTCTcaggtttttcatattttgggcATAGACCCAACTTTCTG CTCCCTTGGGCTCTATAATAATTTAAGTTTGGGGCCTGGGGGGCTGTTAG CACAGCTATGAAGTTGTTTTGGTTGTATATCGCAAGTATATATAACTGCC ATGATCGGGTCATTGTATTCTAAACACCCGGGCCGTTTGTCTCGCACAGT TACATAATCTTTCTGATATCTATAGATAAATTTTGGTATTAAATGTATGG TATtatgtaatttttattttaatgtatgTTTATTACAGGGAGACAAAGGT CACGAATGTTGGCAACATTATTCAAAGACGAAAGATGTCAACAACTACCT GCTCACGAGATCTTGGAGAAAATGTgactttctatttttcattgttttat tcGTAAAATGTGCCTTTTCTACGCAATGTCACAAATgtgctttgttttga aaagatgtgTGGAAATACTATTTACATATATGGAGAAAAAGGTTGTCAAG ACTTAGATCATTTTGGAATTTTGCATGACTTCATCTTCTTTCATTTCACT TTAGGTATTTGGATCGTATTATTCGTGGACCTCAATTGAAAGAATTCTCA GACATGTTATTAGACCACCAGAAAGCAACCACGGCTGATGGTAAGAAACA AGAATTCTCATGCCTCTCCTCAAGGAAACTGAAAATCTAGGATATCCATT ATCATTTCACTTAGCCTAtggttttttgttttgcttttcagGCTCAACAA TTCTTGACCGTGCAGTTGTGGAACACAACCTATTGGCAATCAGCAAGATa tacaaaaacatttcaatagATCAGCTAGGAATTCTTCTAGAAATCTCTCA ACNCTTGTtcgtttgttgttgttttttttgcctgaggatTATATCCTTAT ATTTACCCCTTTTATATATTAAAGTCCATGTAAATAAAAAGCTATAGTAT ATTCTCCCCTCCACCATTTGCTCAAAAACAAAGGNgactatgttatagtc taagacgaatcactatcaaagaaaaatcccaaagccgaagaaaattcgca aacgggttttttttgccgaaaagagtttacagtcggtagagttgctagTC TTAGACTATACGANTCCACCATttgctcaaaaacaaaggaTATGTATACA AATCATTGCCAGTTTTATATATACTTGCAATTTCGAATTTGTGACTGTCc tgttttgtttgataaaaaattttacAGTAACTTTTGcagggaaaaagtaa aaaagtcccAGCTTGTAAGCTTTGCAGTATGTTGATCTTGCTTTGATTTG AGCTTGAATTTCTTTCTACCCAAAAAGAGACATTAAAAATGAGGATGAAA TAGgataaaatttaagaaatccCCAGAAATTAGCTTAAAATGGAAAAGTA TCAATTAAGAAAAACCTTGAGGCAGatttaaatgacattaaatttcttat ttacaaaaactgataaaaacgtaATTCAATCATGATAAACAAATGATTCT AAACTGTCTTCCGACAATACTGTATTACAGTCTCGACTAATTCCAGAAGG CTGATGTAAATTTTTCCAAGTCAATCTCAAATTAtatcaggacgtcaagt gaaaaatTGCATATCATGATGACATATTTCAGTAACAGTCTCAATTTATA CCAGGGCAttggtgaaatattccaagtcataatctcaaattgtacacagg acgtcaagtgaaataagttataatttcaaattaaaccaggacgtcaagtg aaatttGCAAGttattataatctcaaattgtaccaggacgtcagtgaaat attccaagttataatccgaaattaaaccaggacgtcaagtgaaatattcc aagttataatcccaaattaaaccacgacgtgaagtgaaatattccaagtt ataatctcaaattgtaccagaacgtcaagtgaaataattccaacttataa tcccaaattaaaccacgacgtgaagtgaaatattccaagttataatctca aattgtaccagaacgtcaagtgaaataattccaacttataatcccaaatt aaaccacgacgtgaagtgaaatattccaagttataatctcaaattgtacc agaacgtcaagtgaaataattccaacttataatcccaaattaaaccacga cgtgaagtgaaatattgcaatttataatctcaaattataccaggacgtcg tgaaatattgcaagtctCAATCTCAATAATAAACCAGGAtgctgtgccaa atatttcatttctgtATTGTGCTATCTCTGAATTTCTGATTCTtacctag aaaatttagaataataatctgataatttttacaGGTACGACTAGGTAACT GAACTTCTCGAGAAAATGTGAAAGTGTTCGAACAAAAAGTATGTTAAAAG CAGTCTTTTAAAGTCCACAATTGACAATATCAATAAGTActttgtttgac atttttcaaagttgtcaaagaactgctaacaccagatgaaaataactttt taagagTGGAGATATGAGGGTATTCACATATCTAATGAAACACTGCCTGT GATTCATAGGATTCATAAGAAATATACAAACTGACTTACCTACTTAGTTT CTCTGACTCTGTGTCTTTTTGCTGTATGTAGACttgttgaaaaatcattt taaaacagtATTCTACAGAAGCATACTTGAGGAATAAGTACTCCCTTAAA CTAAGTCATCTTGTAgtctcaataaaacaaatgaaccaagaagaaaaatt cCATAATGAGCTGGATTTTCACAGTGTGTTGTGTCTTCTTTTTTCCAGTG ACCAGCGTGTTTTTGATCGTTTGAACCAAGCTCGGCCTTTAAACTTAGGC GGTTTTCACCACGGAGCGACTAACCAGTCTCACTGGTTAGTCCAAGCANN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNTAGAAATACTATTTACATATATGGAGAAAAAGG TTGTCAAGACTTAGATCATTTTGGAATTTTGCATGACTTCATCTTCTTTC ATTTCACTTTAGGTATTTGGATCGTATTATTCGTGGACCTCAATTGAAAG AATTCTCAGACATGTTATTAGACCACCAGAAAGCAACCACGGCTGATGGT AAGAAACAAGAATTCTCATGCCTCTCCTCAAGGAAACTGAAAATCTAGGA TATCCATTATCATTTCACTTAGCCTAtggttttttgttttgcttttcagG CTCAACAATTCTTGACCGTGCAGTTGTGGAACACAACCTATTGGCAATCA GCAAGATatacaaaaacatttcaatagATCAGCTAGGAATTCTTCTAGAA ATCTCTCAACAAAAGGTAACCATTTGGGTAACCATTTTTCGTGACCTTTG TCTCCCTGTAAACATTACAATAAACCCGAACCCGAAAAGGCTaatttgaa tgaaaagacattctCCTTTATTTTATGCAGGCGGAGAAAATCGTGTCCAG TATGATTTGCAATAATACAATCAAAGGGTTCATTGATCAAGTCGAAGGCT TCGTCTATTTTGAAGGTACCCTACCCATATGTTCTTTTGTATGAAGTTGA TTTCGTctctttatacacgtttttgtaTGAGAACAGACTTTATATGAacg aacataaggcttcgatggccaaaataccaAGAATAACATgataacatttt aagaacattattaggcttaaaactgaaaaagttcaGAACATATAAAAAGC TTcgaaaaactttggacgttcctggtcataaaaaacgtgtttaGTTTGTa cacaaattcaacaaaaaccaAGATTTCTTTACAGATGGAGCATATCGTGT CCCTTAGCCGAAAGCCAAGAGATAAAAGATCTACATCATTTAGCTTTCAT GAGCACactcatagatttataaagcccgaagggcaagatgtcgtactttt gctaaaaagtgtgccgtggttaggtaggaaatcctacataggtcacgtga cattacaatagagaCATATCAGCGCTTGACTTTGACCGTATTCTTTTACA GCACAAGAAGTGTTGGAGTCGTTCGATCAGCAAATTCAAAGCGTTTGCTT ACATGTCAATGACGTCATGGACAGAATACAAGAACACGTTCCTGATTGGC AGTTCAACATTGCCGACAAATCCATCATCATGGATACTAGTTAGTCTCAG TTACCCAGATTCAAGTTGTACGAACGGTAACATTCcatgattttgagaaa aaaagataaaaggtaTGCGTCTTTTATTCTTTAGATCGATTCATGTCAGA GGTATTGGTTTTTCGGCTTGTTTTAGAACTACTGGCTCAAGAAtagtttt tgttgaaagtagCCTTTCCATTTCAACCATCGTTCGTTCCATTTATTTTG GATGATCAAAAATTGgtgacattttttttgaaaatgacatGTTATGTTAG AACACTCACTATCGGACATTTTATTACAGAAATACATCACAGCGCTTATA AAAGTTGCTCTTTATTATTTGGTTGAAATTATTATCTTTTGAGTGGATTA TTTTCGCGTGGAATTTTTGCGAATCTAGAATTTCCGCTGGGATTAAATCG CTTTTTTCTTATAACGTCTTTCATTTACTAAGGGTTTTGTCAAAAACTAG GATTTTTTGCGAGGACTCATTTTCGCCAATCGGCtagaaaatcgcgaaaa ttaatccacgcaagGTGCATACCCTATTTTCAACATGATTAATAATTTAA TATGATCTATTTATGGTGAGAAAGGTGTGAAGTTTTAATCATCGGAAATT AAATAAATTACAGATAATTTAAGCTATCGGAATCAGCTCAAAAACGTTGC TGTTGAGAAAACGTCTTATTTTGTATTGAGCGCAGTTTTATTTGAAAGAG TGGAAATACGTGTGAATGCTATGAGCATATGAATGAACTTTGAATTTATA TTGACAAAAGggaaatgaaaattatattttatttaaaattgttttgtttt gatagtttcatgatttcattaacctttccagcgcgcaactttttaaattt tcacgctgtcagcgcgcaacattttttcagaaaatagacatgttcagtta tttgATCATAACTCAANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013564XLOC_013564Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024167-exon-sc0000478-1491911889:58145..58352TCONS_00024167-exon-sc0000478-1491911889:58145..58352Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1510915933:58145..58352TCONS_00024167-exon-sc0000478-1510915933:58145..58352Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1575043694:58145..58352TCONS_00024167-exon-sc0000478-1575043694:58145..58352Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1491911889:58826..58977TCONS_00024167-exon-sc0000478-1491911889:58826..58977Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1510915933:58826..58977TCONS_00024167-exon-sc0000478-1510915933:58826..58977Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1575043694:58826..58977TCONS_00024167-exon-sc0000478-1575043694:58826..58977Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1491911889:59508..59611TCONS_00024167-exon-sc0000478-1491911889:59508..59611Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1510915933:59508..59611TCONS_00024167-exon-sc0000478-1510915933:59508..59611Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1575043694:59508..59611TCONS_00024167-exon-sc0000478-1575043694:59508..59611Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1491911889:60050..60206TCONS_00024167-exon-sc0000478-1491911889:60050..60206Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1510915933:60050..60206TCONS_00024167-exon-sc0000478-1510915933:60050..60206Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1575043694:60050..60206TCONS_00024167-exon-sc0000478-1575043694:60050..60206Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1491911889:60588..60738TCONS_00024167-exon-sc0000478-1491911889:60588..60738Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1510915933:60588..60738TCONS_00024167-exon-sc0000478-1510915933:60588..60738Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1575043694:60588..60738TCONS_00024167-exon-sc0000478-1575043694:60588..60738Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1491911889:61333..61417TCONS_00024167-exon-sc0000478-1491911889:61333..61417Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1510915933:61333..61417TCONS_00024167-exon-sc0000478-1510915933:61333..61417Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1575043694:61333..61417TCONS_00024167-exon-sc0000478-1575043694:61333..61417Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1491911889:61599..61647TCONS_00024167-exon-sc0000478-1491911889:61599..61647Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1510915933:61599..61647TCONS_00024167-exon-sc0000478-1510915933:61599..61647Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1575043694:61599..61647TCONS_00024167-exon-sc0000478-1575043694:61599..61647Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1491911889:64156..64192TCONS_00024167-exon-sc0000478-1491911889:64156..64192Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1510915933:64156..64192TCONS_00024167-exon-sc0000478-1510915933:64156..64192Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1575043694:64156..64192TCONS_00024167-exon-sc0000478-1575043694:64156..64192Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1491911889:64294..64409TCONS_00024167-exon-sc0000478-1491911889:64294..64409Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1510915933:64294..64409TCONS_00024167-exon-sc0000478-1510915933:64294..64409Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1575043694:64294..64409TCONS_00024167-exon-sc0000478-1575043694:64294..64409Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1491911889:64525..64609TCONS_00024167-exon-sc0000478-1491911889:64525..64609Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1510915933:64525..64609TCONS_00024167-exon-sc0000478-1510915933:64525..64609Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1575043694:64525..64609TCONS_00024167-exon-sc0000478-1575043694:64525..64609Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1491911889:65096..66162TCONS_00024167-exon-sc0000478-1491911889:65096..66162Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1510915933:65096..66162TCONS_00024167-exon-sc0000478-1510915933:65096..66162Clytia hemisphaericaexon
TCONS_00024167-exon-sc0000478-1575043694:65096..66162TCONS_00024167-exon-sc0000478-1575043694:65096..66162Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000478supercontigsc0000478:58145..66162 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.9383 6.41567 2.80114 2.2206 7.19015 5.97058 18.3891 8.94462 2.22106 15.0286 10.4418 6.01295 3.13348 6.97405 6.89319 3.07362 7.63729 7.45692 5.47013 7.05599 2.28787 3.84305 6.64022 6.87952 6.63652 5.78535 4.82406 0.24481 5.7363 1.35912
Blast
BLAST of TCONS_00024167 vs. Swiss-Prot (Human)
Match: CSN4 (COP9 signalosome complex subunit 4 OS=Homo sapiens GN=COPS4 PE=1 SV=1)

HSP 1 Score: 503.827 bits (1296), Expect = 6.056e-172
Identity = 241/396 (60.86%), Postives = 307/396 (77.53%), Query Frame = 1
Query:   55 MAENIRTSLTNLANQGRSQKDSIDKYRAHLNEILSLQNPELTDLLKSFLTTALQENVSVVVSRQLVSDVATALKSLDATTIKDVSYFTLNNLQTRAISFEEQVVNIRQHLANVLQEEGDWRKSAEALVGIPLETGQKQYSNAFKMEIYLNIAQLYLEDDDPVQADIYINRASLLQKSDDTTDALTIKYKVCYARVLDYRRKFLEAAQRYNELSYNTLIADSERINALKHSLICTILASAGRQRSRMLATLFKDERCQQLPAHEILEKMYLDRIIRGPQLKEFSDMLLDHQKATTADGSTILDRAVVEHNLLAISKIYKNISIDQLGILLEISQQKAEKIVSSMICNNTIKGFIDQVEGFVYFEAQEVLESFDQQIQSVCLHVNDVMDRIQEHVPDW 1242
            MA  +R  L  L N   S KD   KYR  L + + L   E  + LK+F+   + ENVS+V+SRQL++D  T L +L  +T K++ +FTL  +Q R ISFEEQV +IRQHLA++ ++E DWR +A+ LVGIPLETGQKQY+  +K+E YL IA+LYLEDDDPVQA+ YINRASLLQ ++ T + L I YKVCYARVLDYRRKF+EAAQRYNELSY T++ +SER+ ALKH+L CTILASAG+QRSRMLATLFKDERCQQL A+ ILEKMYLDRIIRG QL+EF+ ML+ HQKATTADGS+ILDRAV+EHNLL+ SK+Y NI+ ++LG LLEI   KAEKI S MI    + GFIDQ++G V+FE +E L ++D+QIQS+C  VN+++++I +  P+W
Sbjct:    1 MAAAVRQDLAQLMNSSGSHKDLAGKYRQILEKAIQLSGAEQLEALKAFVEAMVNENVSLVISRQLLTDFCTHLPNLPDSTAKEIYHFTLEKIQPRVISFEEQVASIRQHLASIYEKEEDWRNAAQVLVGIPLETGQKQYNVDYKLETYLKIARLYLEDDDPVQAEAYINRASLLQ-NESTNEQLQIHYKVCYARVLDYRRKFIEAAQRYNELSYKTIVHESERLEALKHALHCTILASAGQQRSRMLATLFKDERCQQLAAYGILEKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFETREALPTWDKQIQSLCFQVNNLLEKISQTAPEW 395          
The following BLAST results are available for this feature:
BLAST of TCONS_00024167 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CSN46.056e-17260.86COP9 signalosome complex subunit 4 OS=Homo sapiens... [more]
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