TCONS_00024194 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024194
Unique NameTCONS_00024194
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2470

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024194 ID=TCONS_00024194|Name=TCONS_00024194|organism=Clytia hemisphaerica|type=transcript|length=2470bp
ATCAAACAGGTACTCTGACAATCAAGCAGCTCAAGATGCTATCAATTTGA
CGTACTTTCATTGGGGAATTCACGGTTGGATTGTATATGTGGTCATCGGT
TTGCTGCTCGGATTCTTGAGTTACCGAAAAGGATTACCGTTAACAATGAG
GACCTGCTTCTATCCGATTCTCGGAGATCTCATTTATGGAGTGATTGGAG
ATATGATTGATACTCTGTGTATCATTTGTACACTGTTTGGTGTCTGCACC
AGTCTTGGGTTGGGAGTCATGCAATTGAACAATGGAATTCATCGAATCAA
TAGCGATATTGCTGAAAGTACCGACAACCAAATTATCATCATTTGGTGTG
TCACAGCATTGGCTACCATTTCTGTTATTAGTGGTTTGAAAGTCGGAATT
CGAAGATTGTCAGAAATTTGTTTCGGAATCGGTTGTTTCATCatgttttt
catcttcttttcaTCTGATACTTGGTaccttttaaatgttttcgtTCAAT
CGATTGGTTATTACTTGCAATGGATCATCCAGTTAGGATTTCACACGGAA
GCTTTTGCACAAGAAGGAAATGCGCCTGATGGCAAAGAAAACCCATCTTG
GATCGACAGCTGGACCATCTTTTACTGGGGTTGGTGGATCAGTTGGTCAC
CGTTTGTTGGAATGTTTATCGCAAAAATCAGTCGTGGAAGAACTATCAAA
GATTTTATCATTTACACTTTGACATTGCCTTCCCTGTACTCTTTCCTTTG
GATGGCTATCTTTGGCNTTACACTTTGACATTGCCTTCCCTGTACTCTTT
CCTTTGGATGGCCATCTTTGGCGGTGTTGGAATTCAAATGCAGAACACTG
CTGAGAAAGCTGGAATTACATGCCAAATGTACAATATGACTGTAAACAAC
ACAGCAAAATATTCAACCCGTTGGGATGAAATTTATGCCATGTATGGAAC
GACGAGGCTGAATTGTCGCGGAGATACTGAGATGTGGTTCGATGTGATGA
TGTCACACAAAGATCTCGGAATGATGATGGCTGTTTTGTCTCTCATTGCT
ATCATCTTATATTTCGTGACAAGTTCTGATTCTGGCTCTCTTGTCATTGA
CTGCTTGTCTGCTAATGGAAACCCCGAACCACCTGTATTGCAAAGAATCT
TTTGGGCTTTGACTGAAGGAGCTACAGCAACAGCTCTATTGAAAGCTGGA
GGACAAAAGTCGCTGTCTGCCTTACAGACAGTTTCTGTTGCGTGTGGTCT
GCCGTTTACATTTTGTTTGAATTGGACATGTGTTGCAATGTGGAGAGCTG
TTCGTGAGGAATATGGTGAAATTGACGAACAAGAAGGGAGATGGTATCGA
AGTATGTGGTCAATCGCCGACTTCAGAATCCTCGTTCAGATTCCTCTCGA
TATCGTTGCACCCTGGTATCGACTAGCCAAGTTAAGATTGAAGCTTGACA
AACAAGAGTCGAATGGCGGTATGTTCATTTTGTACGCAATCCAATTTGGA
TTACCATTTTATTTGTGGattattttgatgattgtgGAAGTTGGTGTGGA
GCAAATCTCATATGTTGCTTGGGCCTGTTTGATGGCTTTTTTCGCTTTCT
CAAGTGGTGTGCGTGGTGAAATCAGAGAGCAATTTGACATCGAAGGAAAC
ATGATTGAAGATCTTTTCACAATGGTGTTGGTGTATCCTTTGGGTTTATC
TCAGCAAAATGATCAATTGGAGTTTGGTGAAACGAACaacgagaaaaaag
aaaatggcaTCGAAATGGGAGTCAAGACTTAAAAGATTGATCAAGGTACG
ATGCGAAATGAGATTTTACAGGCGAGAACAATAACCTAAAATAAAAGCAA
TTTGTTATCAATGACACTTAAATGTTAGCATTATTCCCAATAAAAAGAGG
CCGAAGCTATAGTCTTCACCAAATAAATTTAATATAGAATCTTGAAgtga
taatcagatggtttgataTACTTGGCATGTGCTTTCCTATTAttgtattt
aaaatattttttgcctaACTGTTTTGCAAATTCGAgagttttttactttt
agtaAGAAAACAATCGAATCATCACtgtgtaagaacccattttgggaaat
tttgaattatgacatgtcgactttggaaaataatttgataaaagtgtttG
TGGGTTTTACTTAGAACCACAGAAGGTTTCTGCAGTCCAAATagctcaaa
ccatctgattatacCTTCAAGCCCTAATTTTCTTGCAAATTACTACCATT
TTATATTGAGGATTTGGACACTTGTATATATTTTTGCACCAAATTGGTTT
TGTATGAGATATATTGGTATTGAATCATTATATATTACTTGAGAATAAAG
TGTCTCTTTTACTTGCCTTTTTAATTAACACCTGCAACCCATGTAATCAT
GTAATCATATCACTCAAAGAATTttggaataatttttttcaaaattatat
agTACTCTTAATTATCCTTT
Run BLAST on NCBI

transcript from alignment at sc0000478:93188..109696-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024194 ID=TCONS_00024194|Name=TCONS_00024194|organism=Clytia hemisphaerica|type=transcript|length=16509bp|location=Sequence derived from alignment at sc0000478:93188..109696- (Clytia hemisphaerica)
ATCAAACAGGTACTCTGACAATCAAGCAGCTCAAGATGCTATCAATTTGA
CGTACTTTCATTGGGGAATTCACGGTTGGATTGTATATGTGGTCATCGGT
TTGCTGCTCGGATTCTTGAGTTACCGAAAAGGATTACCGTTAACAATGAG
GACCTGCTTCTATCCGATTCTCGGAGATCTCATTTATGGAGTGATTGGAG
ATATGATTGATACTCTGTGTATCATTTGTACACTGTTTGGTGTCTGCACC
AGTCTTGGGTTGGGAGTCATGCAATTGAACAATGGAATTCATCGAATCAA
TAGCGATATTGCTGAAAGTACCGACAACCAAATTATCATCATTTGGTGTG
TCACAGCATTGGCTACCATTTCTGTTATTAGTGGTTTGAAAGTCGGAATT
CGAAGATTGTCAGAAATTTGTTTCGGAATCGGTAAGATTGATAGAATAGA
CCTTTTCGGAGTTGTTGATTTTTCTAAAAAAGCGATGCATTGTGGGATTG
TTTCGGGGGTATTACAATAGAATTTCCTCGAGGAATTTCTTACTCTGTAC
CAGAGTGTATTCACTTTCAAATGTGAATTCCCATGCGATTTCAAGTGACA
ATTAGACACTGGTCTGTGTTGGTTAGCAACGATTACATCAAAATATTGTT
TTAAAATGATCGACCAGGCGACCATTCTTCAAATAGACGTTTTGAAATGA
CTGCTAAATTGACTGGATTTTCAGCAGCCTTTTTGTAGATTTTTACTGGT
TCTTTACCGGTACTTAAAAGACGTGGGTACTTAAAATCGGTTAGGGTGTA
CACATTGGAACAAGTGGAAATTCTCTATTTGTCGATGGACGTCCTTCATC
TAACAGGGTTTTATAACCATTTCTTCTTCGACTCTGAGTTGTAGTCCCTC
CTTACCAGGCTTCTACAATCGGTGCCGAAATATATTGGCATTTTTGGGTA
TTTTAACGTTTTTCAAAATTTAAAGATCGGGCGAGAATTACAGTTTCAGT
ACTTCCACTTTGTTTCATTGGATTTTTCGATTTGGGAGGGTTAAGTGGCT
TCCAGGCTACATTCTCAGCCTTATTGGAGCATTTAAACTTTTAGATCCTG
AGATCCTTAAGTGTTAAAACTCAGAGTTAAAACTCTACTTTCCAACCGTA
CTTTGAAGCACTTAAAAATCATTTGTGGTTTTCAAATTCCCCTTTTGTGT
GAAATATTACGGTGGGGATTGTAGTAAACATTGTACTGTTTTGCTTTCAG
GTTGTTTCATCATGTTTTTCATCTTCTTTTCATCTGATACTTGGTACCTT
TTAAATGTTTTCGTTCAATCGATTGGTTATTACTTGCAATGGATCATCCA
GTTAGGATTTCACACGGAAGCTTTTGCACAAGAAGGAAATGCGCCTGATG
GCAAAGAAAACCCATCTTGGATCGACAGCTGGACCATCTTTTACTGTGAG
TATTTACGTTTTATAAAATCAGACGAATGAAAAATTTCTACAAGAAATCA
TTTTCTCTTTAGTCCAGAATATTTGAAAATCGCTGTCGTCTTTCTTCAAA
ATCCATTGAAACATACGATATTTTACATTTCTATATCCATATTATCCTAA
AATTACTTAAAATCATATTTGTTGTAAATTTCAGGGGGTTGGTGGATCAG
TTGGTCACCGTTTGTTGGAATGTTTATCGCAAAAATCAGTCGTGGAAGAA
CTATCAAAGATTTTATCATTTACACTTTGACATTGCCTTCCCTGTACTCT
TTCCTTTGGATGGCTATCTTTGGCNTTACACTTTGACATTGCCTTCCCTG
TACTCTTTCCTTTGGATGGCCATCTTTGGCGGTGTTGGAATTCAAATGCA
GAACACTGCTGAGAAAGCTGGAATTACATGCCAAATGTACAATATGACTG
TAAACAACACAGCAAAGTAAGTGATAAAAAAGATTGCATACAATTAAGTC
TCTAAACTTCAAAAGTTCCTGGGCTAAGACATGAAGGTAATAAAGATATA
GATGGAGAGAAAACGTCTCGGTAGTGATCTAAATGGTCCTTGAAATCTTT
TATAAATCTATTCAAAGCGGCTTTTCTTTGATGTACCATCATTGGAAACA
AAAAACATCAATTTATAACTTTATAAGAACAAAAAAGAGACTGTTTGGTT
GATTTTGAAAAACTTAATTTTGCCGAAAATCCTTGTTAAAATGCGATTCG
AAATAGTTTCAACTGATGTGAGACTAAAAGAGTATATTAATTTCATAAGG
ACATTTTTTTGGGCTGGCATTTTGTTAACATTGAGAGTTGCATCACATTA
TCATTGAAAGTTTCTTATCTTAAAATCTTCACGTCTAAGTGGGCAGCGGT
TTTCATACTCTGACAAAATGATCGATACAAGGTTCCTAATCGTAACACGT
AATTCTTTTTTAAAATCTATCGATGGCTTTATGGGCAGCTTCCCCTAGAA
GTTTGGAGTATTGTGCTTATTATGTGAAGTTTCTTTCAATTTTTCATGAC
AAGGCTATTTATTATATTTCAACATACATGTCTTTTCATTCATCTTAAAT
ATTCCCACAACTATACCGAAAATTAATTATCTTATTCCCAAAGCAACCAA
AAAGCTGTTTGCTTCCGATGATAAATCAGAATAGAACAAAAGGCATTGAC
TCTCCATCTATCTTTATTACTTTCATGGTTTTAGTTAAATTTCTTCATAA
GTCTAAAAACGAAAGGAACAGCTATAAGCACGTTCTATTCTAAAATGAGA
ATAGAGAAGGTGTCACCCAAAATTCATTACTTAAGCATGTCAAAGTGAGG
TGGGTTGATAGTTATGAGAGTTCTAAGTCGTTAGTTCCGGAATTCAGGAT
AAAAATAGTCTGGTTTCAATGCCGATTCGTTTGCTTTTAAGCCAATTTGC
CATAATTTGAGAATGAACTCCCTGCTCATTACAGAGATTTCAACGTATAA
ATATATCATTAACCCCCCTCCCATCCACAGAAAGTATGGGAATAATTAGG
GAGTTTCATTTACCAATTTAGATACTCGAATCGTTGGGATGAAGTATACG
CCATGTATGGGACAACTATGTTGAGTTGTCGTGGTACAACTGAAATGTGG
TTCGATGTGATGATGTCACACAAAGATCTCGGAATGATGATGTCTGTTTT
GTCTCTCATTGCTATCATCTTATATTTCGTGACAAGTTCTGATTCTGGCT
CTCTTGTCATTGACTGCTTGTCTGCTAATGGAAACCCCGAACCACCTGTA
TTGCAAAGGATCTTTTGGGCTTTTACTGAGGGAGCTACAGCAACAGCTCT
ATTGAAAGCTGGAGGACAAAAGTCGTTGTCTGCTCTCCAAACTGTCTCTG
TGTCTGTCGGCCTACCGTTTACATTTTGTTTGAATTGGACATGTGTTGCA
ATGTGGAGAGCTGTTCGTGAGGAGTATGGTGAAATTGACGAACAAGAAGG
GAGATGGTATCGAAGTATGTGGTCTATCAGCACTAAAGTTTTTGTCCAGA
TCCCTCTTGACACCCTTGCACCCTGGTATCGACTGGCTAAGTTAAGATTG
AAGCTTAACAAGCAAGATTCGAATGGTGGTATGTTCATTTTGTACGCAAT
CCAATTTGGGTTACCATTTTATTTGTGGATTATTTTGATGATTGTGGAAG
TTGGTGTGGAGCAAATCTCATATGTTGCATGGGCCTGTTTGATGGCTTTT
TTCGCTTTCTCAAGTGGTGTACGTGGTGAAATCAGAGAGCAATTTGATAT
CGAAGGAAACATGATTGAAGATCTTTTCACAATGGTGTTGGTGTATCCTT
TGGGTTTATCTCAGCAAAATGATCAATTGGAATTTGGTGAAACGAACAAC
GAGAAGAAAGAAAATGGCATCGAAATGGGAGGAATGAAGGGCGCTTACAC
TAATACTCCAACAGTGGCTCAAAAAGTTTGACCTACCTATACGTATGTAA
TTTATGTGTAAAGCGATTTGAAAATAAATGGGATGGAGATCTTATTTTTA
CTACATCAATCTTTGATATAAATGATAAGATAAACTAGACATTATATACA
AGATTACTACCTCTTTGAGACATTATGATTGATCTTTTTTGATGGATGAA
AATTATTACAATTTTAAATGTTTTATATAGGGGCTTAAATGCTTATCATT
TTAATATGACTCGCTTTTAATGTATTTAAATTACTTTATTTTTAACTGAT
CTATTTTTTAATATATTTTAAGCTGCATGTAAAGGCACTTGATCGGACTA
CTATACTCCTGTCTTACAGCCCCAGTGGAACCTTTTTTGCAGTGGGGATA
AAAATCCCTATCGAAATCCCTATTGGGATAGAAATTTTATTGCTCTAAGG
TTAAAAAATCCAGTGGGGGATGGTTTTTGAGTGCAATCTTTAGACATTGA
ATTTCGAGTGGGATGAAATCAAAGTCAACTTCCCAGTGAGGCTGAAATTC
AAGGGTATTTCCCCACCGGGGGACGAAAGTTTTGCTTAATTTTCCAGTGG
GGCTGGGATCCCAGAGGGTCTGTGACACAGATGTGTACTACTGATCGCTT
TAAACACCCCCTTCTCACAGATCTGGTAGGATTTTTTCAGCCAGTGGCGA
TAAAAATAACTGACTGAAATTCGGAAGGGCGGATTCGTATTCCCATTTTT
TTGGCTGGGGATTTCAATTCTTTTGTTTTCAAGTCAGAAAGTTCTGTGGG
GATGGGAAAAATAACATACTATTTTGCAGTGAGGATTGGTTTATTTGATT
ATTTTCAGTGGGGACAAAAATTGAGATCTTTTCAGTGAGAAGGGGTCTCA
GCAGGTCAATGAGAAGGGGGTGTCTTTAAGTGGAAAATATAGATAGGGCA
CTACAGTCTATAGACATACTTACATCCCTGTGTCAGGCCCGTAAGAACCT
CTTACCCACCGGAAAAAAATGATCCAAAATTCCATCCCCGAGTATGTGAA
AAATTAATTCCATCCATTTATCCTTAATTTCATTCAAGCTGAGACATTCG
TCTGTTTTCATCACTGTCCATGAAAAGAAATTTTAATGTACTTGAGGTTA
GCTGATGATTTTATTAAATGCTACTTTTGTTATAATTATGTTTTAAAAAA
TTATAAAGATTCAAAGAGGATCATCTCTTGCAAATATCCAAAGCAATATT
CTATCTATATCATGAACGATTTTATTCAAGGCTTGTATGTTGTAAAGAGA
CTTGCAGGTCATGTTAGGGGGAATCGTAGACCTTTATAGATATATTCCTA
TTTTTTTTTAAGAACAAACTATATAAGAACATAAGGCTTCGATGGCTAAA
ATGTTAAGAACAAGTTAAGAACATCTTAAGGCTTTTTTGACCCTTAAACA
CCTATTTTCTTAGGAAGTTGGGCAAAAATACTCTCAAAAATGGTGAAAAT
AAAAGCATTTTAAGAACATTTTTAGGCTTAGGCTATCTACCTATATCATG
AACTATTTTATTCAAGGCTTGTATGTTGTAAAGAGACTTGCAGGTCATAA
CTAGGGGGAATCGTAGACCTTTATAGATATATTCTTATACATGTTTTTTT
ATAAGAACAAACTATATAAGAACATAAAGGCTTCGATGTTTAAAATGTTA
AGAACAAGTTAAGAACATCTTTAGGCTTTTTGGACCCTTAAACACCTATT
TTCTTAGGAAGTTGGGCAAAAATACTCTCAAAAATGGTGAAAATAAGAGC
ATGTTAAGAACATTTTTAGGCTTTAAGCTCAAAAAGTTAAGAACATCTGA
ATGTTTCAAAAACTTTGGATGTTCTTATAAAAAAACGTGTATAAAAGAAC
GAGCAGAAACCTAGGGTCATGTAAGCCTCTATGTTTGTGGTAAAAAAATG
TTTTTCAAGGACTGAAGTTTCGAAAAAATTGATATCAATATTATTTTTTC
TTTCTTTTTCTTTTTCATTATGAAGTAACTGTTGGAAGTGCATCCGGGGA
GTGGAAAGACTGGCACTAGGGTGAATTGATTTACGCTGTGAAGACTTTTT
AGAAATAACAGGGGTCTTTGCATATTGTAATAGTTTCAAAAATATGAAAT
GGTCAAATGAAGGTAGTCACAAAGGTAAGAGAGGAACGGATATCTCTTTA
TGTCAAGTGTTTAGATTCTCATGGGTTATTCTTTCAAGGAAACCGAAAGT
ACTTTTTAATGATACCATTGTAATGTATAAGTGGATGAAATTCATCACTA
ACATATCTTTAATTGTAGTCTAATTAATTCTACCTATTTTGATATACCAA
CAATTTTGTCGATCGCTCGTTAAGGGCAGGAAGACAGAACCTCATTTAAG
CAAATCGTCAATAGNAATTTTGTCGATCGTTTGTTAAGGGCAGGAAGACA
GAACCTCATTTGAATAAATCGTCAATAAAAAATGTTAATCAATGCACATG
CTTAGGATTGGAGTTGAAAATATTGAAAAAGGTTGTCTCTCGTTTTAGAT
GGTTTGAATGATGAGATATTGGTGAGTGTCAACATAACACACTTCGAGAG
GTGAAGAGAAATAGATAATTTGTCTCGCGAAAACAAAATGGCAGCACCAG
AAAGTGTGGAATTACTGGCGATGGAAAGGTGAGAATATCTTCTTTGCGGG
TACATGTTCTAAAAAACTACACGCTTTTCTTTATAATAATGTCCATGATA
AAAATGGGTAAAAATTAAGAATACAGTAATGCTAAGAATATCACCATCAT
GGAATTTCGCTACTCAAGCTAAGAATGTCATTTTTAGAGCATTTTCAATT
ATGAATTGCCAATTATCCCCAAGTAAGGCTCACTCCTTTCACAAAAATGC
CATTTTATGCTTGAGACGTATGTACTAAATGTTAAATCTAGTCTGAATTG
AGATCCTAACCTAAGAATGCTGTAAGAATATTTTAGGATGATTTTCCCAA
AAAAGTTAAGAATATCCATGATGAAATGGATTTACACCATTTAAAAAAAA
AGCGTGTAGCAAAAAGGAAACGACGACCCGAAAAAAATGGGTTGTAACCA
ATGAAGTATAAGCCCGAAGGGCTAGAAGTCAATCTCCTTGGTAGGATTTG
AAGCCAACAAATCTTACCAAAGTTGCGCGGCCTTGAGCGGCTCGCCTGGT
TTTTACACAAATGATAGATTGAAATTAAAATTTACCCCTAAATTTCGAAA
AAAATATCAATCGTAAACAAAGGAATTGCTAGATTCAATCTGTCGTCAAA
AATACGGCGCATTTTTTAAGGCTTCACTTTTTCTTGCCTGAGAAAGGTTA
GAGATTGAACTCTAGCCCTTCGGGCTTTAAACTCAATGGTTGTAACCGTA
AGAAAGATCTTAAAATCTTGAGTTCAAAAACGAACTTTCAGCCTCCTCTC
CATTTACTCAAAAGCTAAAAGAACTTAAAAGTCTTATAACTAAACACCCC
CTTCTCACAACAGACCCACAGGGAACCCCTTCCCACTGGAAATATTGGCC
AAAATATCGTCCCCAGTGGAAAATTATAATCTAATTTTTGTGCCCTCTGA
AAATAATCAAATAAGCAAACAAGATAATGCAAAATATTGTGCTATTTTTT
ACATCTCCACCGTATTTTCTGGCTAGATAAAAATGGAATTCAAATCCTTA
GTCATAAAAAACTTGAGAATATCAATCTCCATCGAGTTTCGGTCCGTTAT
TTTTATTCCCACTAGCTGATAAAATCCCACCAGGTCAGTGAGAAGGGAGT
GTAACTAACTAGCCTCAAAGATTTTTTAAGCTGATTAGGAAGAATATTAT
GAAAGAGGAACATCACTAAAAGTATTAATNTATTGGCCTCAAAGATTTTT
TAAGCTGCTTATAGGAAAAATATCATGAAAGAGGAAGAAGCATCATCATG
ATAATGTCGCGAGTTCGCTTTAAATTCAAAACCATTATCTCTATTATGAA
AATTGTTCTAACGTGAATCACTTAACTGAGTTACTTCACGAAAATAATCT
CCGAGCAGATTCTGATACTCCACGCATGGCATGTATTCATTCATTCAAGG
CTATGGTTCCGTAAGAAATTCATTCGTCATATTCGCCATATCCCCGTAGA
CCAGAACGTAGTATGCACAGTATGATCTGTTATAAGAATACGATAAAATG
CGCAAACTTCACAATTTCTGTGAGAATATCTTCAAATTCGTTCGATTGCA
TTGGAAACACAATTTTATGCATTTCGTTTTCGAAAAACGCGTGTTATACA
AATTGATTTTACAAGAATCTTGTTTCAATCTAGGTATCAGAAAAGAACAC
ATTCAGAACAAGGAGCCAAGTTTTTCTTGAACCAATGGCTGGAAAATATA
AACAGCATTTAAGTGAAAAATAATGATATAGGGGAGTCTCTTTCACTTGA
ATGCCTCTTTATTTTAACTCAAAGCTTCCTTAACTCTAAAAATTTGTGTT
CAAATGCGTGTTCGGGTTATGGAGACTCCATTGCAATGAGAAAAGTTCAC
CGTGTTGCGAAGGTAGAGCATTGACCAAGGTGGTCCTGACAGGGTCATAC
CAAGTCTTAGAAAATAGAATCTGACGTCTCTATCTATTTAATACCTAGCC
CGGGGTCCACTTAAAGCTTTTTTATAGACTGGATGGCGCGATTAAGTGGC
CCGGTTGTATATATTAATATGCTTTTGCTTCGGCGGACTGTAAAACAGTC
TGATAGATTTTAGTTGTTTTTGGAAGATAAAAACAGTATGAAACAATGTT
TTTATTTGAGAATAAGAGATTGCAAATCTGTTATTGATGTTTGTTTCTCA
TTTTTGATTATATCTTTCAACTCCTACACTGGACTCAGCGTCATCAAAAA
TCATCAAAACGCAAAGTTCAGTCAGAAGTACGACTCTAGTCTATTTAATA
CCCAGCATTCATAAATTTTTCTTACGATGCTACGGAAATTCGACAACCTA
TCATGAAAAAAATTATGAAAAAGTTGTTCAGCCATTGCAGTAAAGGGTAT
TTTGGAGTCTTATTCCATTGCAAGTAGCTTGAAAACCGCTGCATACAACT
CTCACAAAGCAAGAGGAAAAAACAATGACTTATAAAAAAGATGATTCTTA
TTCTCCCATTATGAGAAAGATCATTGAGATTATAATCAGCCAATAAAAGT
TGTAAAATATTTCTTGTCATTGAGGTTTTAATCGAATTACTGTTGTACTT
ATATCATTTTGACTTTGTATTTTTTCCTCCGTTTTGCAATGAAGTTCAAA
TATACCGTCATCTGATTCGCTTTGATCGAATTATTATTGAGTTATCTAGA
TTTGATAATCTTCCATTGACCAATGAGAAACAGTTTTGTAAAGTCATTTC
ATAATGATGGTCCGTTTTATAATGACGATAAGTCATCTTTATAATGTATG
CAAAAAAATCAAGTACAAGGGTGTGGAGGTACTTAGAATGAGTTCGAGGA
GATAATTCAATTTACATGCGACTTTGGTAGAGTGAGGTCGAGAGAAAGAG
AGATGGGGATGTGAAATGCTTTGAAAAGTTTTGAGTGATTGCGCAGTGAT
TGGTAGTTAGTGGTTAGTGGTCGTTGTTACTTTGCTTTTGTTCTACTGTT
GCAAGATTGAATAAAATGTTTAACTCAAGCTGTTGAGGAGTGGTGTAGTT
GCTAAGTGAATATATTTGATTTGATAGACTTTTATAGATTTGGTAGACAT
TTGAACGCGATTTGAATAGAGGTGACCTCAAGCGTCGTTAATTACTCTAT
GTAACAGTCCATACTACATAAATACTATTTTTTTCTAAGAGGCTTCCGAA
TGGTGTCCGTGATGACGTGATTCCAAGTTTTTCGGTCGTGATGAGCAAAA
GGGCAAAAACTTTTATTCGTTATTTGTGATTCGTTCTATTTTTCGCTATG
TTTTGGCAATTTTTGTGATCGTGATGAAACCAGGCTCGGATACAGAGGGA
GGCTATAACCAATGAAGGAGAGTGCACTTTATTATGGTATTACCTTATAT
GGAAACTAATTACTCTCCATGAATAAGATAGCCTACCTCCTGTATCCGAC
GCTGGAAACCAAGAAAAATTGGAGAAATGGCGTGATGAGATACTGCTGGG
GTAGGGGCTCCTCTAACACAGATGTTGTAAAGTCAGACTTTTATTTTGTG
TTGTTTATAGAAAGGAAGAGCGTGACAAAATGGAGAACCACATCGAAGAA
GACATGTCTTCTGATCAGCAGAAAAGGCTGGAGAAGATCAAAGCCAGGGA
TCTGGAGAAGTTGTCTCAGGAACAGATGAATAGGTTAACTAATCAATACT
TCTTTTTTTCTAGCAATGATGGAAAGTACTAGGGATTTAAAATCCATTAT
TTCATCTCCGAATCTAAACATGCTCAAACAGTTCAAATAATTTGCAGAAA
CATCAAATTTGTTCACTAGGAAGCAAAAAGAAAAATAGTATCAATTTTAT
GATCGACAATTTTTTTTGCTTTTACAGGTGCCATCACGTCAGCTTCGAAC
TCGGCCCGTTTTCGTTTTATTTCAACCCTGTTACGACACTTCTGTCGGCG
GCAATTATTTGGCTTTTCGTCATTTTGGTTGTGGTCTTTCCAGAAGATGC
TGAAACAATTATGGCAGATGTCAAAGATTGGATTACCGACAAATGGACAT
GGCTTTATGTTGCAACCCAAGATGTCTGGGCTTTTTTTATCATTGCACTT
TACTTCTCCAAATATTCGAACATGCGGCTGGGTAAGTTTGGATAAATTTT
CGTGAGCAGATATTTTCTTAAACATTCTTTTCCAAAATGATTTAATTTTC
GTGGGACTTATTTCTGGAAATCGGCTCCTTTTTTAAACTAATTTCGCTCA
TTTTCGTAACGGTTTTAGTCAAAAAAATTCTGATTTCAAAATTTTCACAA
ACATTATTAAAATACTAGTAAGGAAGATATAGCTCCGAATCGTGAAATCG
AATTTGAAATCTATAAAGAAAGGTGCATAAGTTTAGATAGTAAACCAGTT
TTTAAAACCGCTTCATCTCTAGATTTAGCCCGTTGGGTAGCTAGGAGGGA
GAGAATGGCGACAACTGTTAAGTTTGGTCAAAGGACCGATTCTTTTTTTT
TCACTCTAATTTCTATCAAACAAAAATTATGAAAATGCCTAAGTTAAGGG
TTTAAAGCAACAGATTTCCATTTAGATTGATCCATTTATTTCCAGGCAAA
GACGACGAAAAACCAGAATTCAACGATGGGACATACTTCATGATGTTGTT
TTCAACTGGAATTTCTATCGGCCTTTTCTATTATGGCGTCGCTGAGCCAG
TCTCACACTATAGAACAAAAGATGAATATGGAAACAGATACCAAAACAGG
CACGTGCTGTTACTCTTTAATTTGTTTATAACAACTTGGAGGTTATTGTC
ATGATAAAAGTCGTACCAAAAATCTTATACTTCTTTTGTATTACAATAAC
ACCATCATCGATCACATGTGTTATTTCTATCAAACAGGTACTCTGACAAT
CAAGCAGCTCAAGATGCTATCAATTTGACGTACTTTCATTGGGGAATTCA
CGGTTGGATTGTATATGTGGTCATCGGTTTGCTGCTCGGATTCTTGAGTT
ACCGAAAAGGATTACCGTTAACAATGAGGACCTGCTTCTATCCGATTCTC
GGAGATCTCATTTATGGAGTGATTGGAGATATGATTGATACTCTGTGTAT
CATTTGTACACTGTTTGGTGTCTGCACCAGTCTGGGGTTGGGAGTCATGC
AATTGAACAATGGAATTCATCGAATCAATAGCGATATTGCTGAAAGTACC
GACAACCAAATTATCATCATTTGGTGTGTCACAGCTTTGGCTACCATTTC
TGTTATCAGTGGTTTGAAAGTCGGAATTCGAAGATTATCAGAAATTTGTT
TCGGAATCGGTAAGATTTATAGAAGTAAAAGAAAGACTCCCTTCTGCATC
TGTGGTCTATTTTCCATCTCTAAAAGAGGAAGACTAGCAAATATGTGACT
TCGCATCCGGGGTGGGTCGGGTATTAGGGTTGGCGGACGGGACCTCCGAA
AANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
ATTTGAGAAAATTTTGGAATTTCAGTCCCATTCAGGGTCACTTTTTTCGC
AAATTTCTAGTCCCACGTAGGGTCCATTTTTCGAACCTCAGCGGAGCACC
TCCATCGGTCGACAAGGGTAGTACCCCCCCGGGCTTTGAACATCTTCCTG
ATCTGAATATCATCCCGTAAAGTATCATGTGCTAAAATTAAAGCATATTG
ATAAAGAAGATGGCATATTCAACCCCTGAATCTAAATCTGTTTACACTTT
AGGATAACATTTGAAACTTCTTTTTCATCCATTTTCAGGTTGTTTCATCA
TGTTTTTCATCTTTTTCTCATCTGATACTTGGTACCTCAGAGTTAAAACT
CTACTTTCCAACCGTACTTTGAAGCATTTAAAAATCATTTGTGGTTTTCA
AATTCCCCTTTTGTGTGAAATATTACGATGGGGATTGTAGTAAACATTGT
ACTGTTTCTCTTTCAGGTTGTTTCATCATGTTTTTCATCTTTTTCTCATC
TGATACTTGGCACCTTTTAAATGTTTTCGTTCAATCTATTGGTTATTACT
TGCAATGGATCATCCAACTAGGATTTCACACCGATGCTTTTGCACAACAA
GGAAATGCACCTGACGGCAAAGAAAACCATTCTTGGATCGACAGCTGGAC
CATCTTTTACTGTAAGTTTGAAAATTTACTTTAAAAACGATGCATAGCTA
CTGTGAATATCACATTGGGTTTTCTTTAAAATAAAAGCTATAATCGTAAA
CAAGATAAGCTTTAAAGGTGAATCTTATGCAGGTCCACAGACTAAAAATA
AAGACCATAATCATAAGCGATGTTTAGAACCTACTACGTTGACATCGCTG
TATTTTTACATCCTACGTTTTAACAAATCATCAAAAGTGCTCCCATAATA
TATTTGTTGTAAATTTTCAGGGGGTTGGTGGATCAGTTGGTCACCGTTTG
TTGGAATGTTTATCGCAAAAATCAGTCGTGGAAGAACTATCAAAGATTTC
ATCATTTACACCTTGACATTACCTTCCCTGTATTCTTTCCTTTGGATGGC
CATCTTTGGTGGTGTTGGAATTCAAATGCAGAACACTGCTGAGAAAGCTG
GAATTACATGCCAAATGTACAATATGACTGTAAACAACACAGCAAAGTAA
GTGAACCAATGTCTAGACATGAGAAACTAGCTTAACAGATTGGCACTGTA
ATGGGCACTGTACCCACTAGAACAGCCATTCTATATACAGTACACGAGGT
ACCGTAAAAATCTTTTAGAAAAATAGGTATTAAGAGCCATTTTTTTTAAA
AATCTTCAGAATAAAGAAAGTCTTATACCTCACCCTCTTAGATTTTGATG
AAATTTTGACCAAATGATCTATCACACAAGAAAATAAGACTCTGAAAATT
TCACCTTGATATCTCAAGTAGTTTTGAAGANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNGACTCATTCAGAAATCCTACTTTGACAATAATTTGCGCTTTACCGC
AAAATTTCTAAGTCCAAGTGTCGTGATTAGCTTTTAGACTGTCCAATATC
TCTAGAATAGTGTATACTAACAGTCTTACTTGTTGATTCTCAAATAACTA
AGCAACATTACTAGGGTGATAATTTATGAGATACTTCAAACAATGCTGTT
TAAATCTTCTGGACAAGAAATATTGGACAGTCTAAAGCTAATCACAACAC
TTGGACTTAGAAATGATTTTTAGGGGTCAATTTTCACTTAGTAGCCTATC
TTTGAGACGCTGTATCTTCAAAACTACTTGAGATATCAAAGTGAAATTTT
CAGGGTCTTATTTTCTTGTGTGATAGATCATTTGGTCTAAATTTCAGCAA
AATCCAAGAGGGTGAGGTATCACACCCTGAAGACTCTTAAAAAAAATGGC
TCTTAAAGGGTTAAAGAGAAATCAAGTGGTATTAAAATAATTAAGAGACC
AGAGATTTGTAAATCCTAATCGTTTGCGATTATAGATATTCAACCCGTTG
GGATGAAATTTATGCCATGTATGGAACGACGAGGCTGAATTGTCGCGGAG
ATACTGAGATGTGGTTCGATGTGATGATGTCACACAAAGATCTCGGAATG
ATGATGGCTGTTTTGTCTCTCATTGCTATCATCTTATATTTCGTGACAAG
TTCTGATTCTGGCTCTCTTGTCATTGACTGCTTGTCTGCTAATGGAAACC
CCGAACCACCTGTATTGCAAAGAATCTTTTGGGCTTTGACTGAAGGAGCT
ACAGCAACAGCTCTATTGAAAGCTGGAGGACAAAAGTCGCTGTCTGCCTT
ACAGACAGTTTCTGTTGCGTGTGGTCTGCCGTTTACATTTTGTTTGAATT
GGACATGTGTTGCAATGTGGAGAGCTGTTCGTGAGGAATATGGTGAAATT
GACGAACAAGAAGGGAGATGGTATCGAAGTATGTGGTCAATCGCCGACTT
CAGAATCCTCGTTCAGATTCCTCTCGATATCGTTGCACCCTGGTATCGAC
TAGCCAAGTTAAGATTGAAGCTTGACAAACAAGAGTCGAATGGCGGTATG
TTCATTTTGTACGCAATCCAATTTGGATTACCATTTTATTTGTGGATTAT
TTTGATGATTGTGGAAGTTGGTGTGGAGCAAATCTCATATGTTGCTTGGG
CCTGTTTGATGGCTTTTTTCGCTTTCTCAAGTGGTGTGCGTGGTGAAATC
AGAGAGCAATTTGACATCGAAGGAAACATGATTGAAGATCTTTTCACAAT
GGTGTTGGTGTATCCTTTGGGTTTATCTCAGCAAAATGATCAATTGGAGT
TTGGTGAAACGAACAACGAGAAAAAAGAAAATGGCATCGAAATGGGAGTC
AAGACTTAAAAGATTGATCAAGGTACGATGCGAAATGAGATTTTACAGGC
GAGAACAATAACCTAAAATAAAAGCAATTTGTTATCAATGACACTTAAAT
GTTAGCATTATTCCCAATAAAAAGAGGCCGAAGCTATAGTCTTCACCAAA
TAACTTTAATATAGAATCTTGAAGNCCAATAAAAAGAGGCCGAAGCTATA
GTCTTCACCAAATAAATTTAATATAGAATCTTGAAGTGATAATCAGATGG
TTTGATATACTTGGCATGTGCTTTCCTATTATTGTATTTAAAATATTTTT
TGCCTAACTGTTTTGCAAATTCGAGAGTTTTTTACTTTTAGTAAGAAAAC
AATCGAATCATCACTGTGTAAGAACCCATTTTGGGAAATTTTGAATTATG
ACATGTCGACTTTGGAAAATAATTTGATAAAAGTGTTTGTGGGTTTTACT
TAGAACCACAGAAGGTTTCTGCAGTCCAAATAGCTCAAACCATCTGATTA
TACCTTCAAGCCCTAATTTTCTTGCAAATTACTACCATTTTATATTGAGG
ATTTGGACACTTGTATATATTTTTGCACCAAATTGGTTTTGTATGAGATA
TATTGGTATTGAATCATTATATATTACTTGAGAATAAAGTGTCTCTTTTA
CTTGCCTTTTTAATTAACACCTGCAACCCATGTAATCATGTAATCATATC
ACTCAAAGAATTTTGGAATAATTTTTTTCAAAATTATATAGTACTCTTAA
TTATCCTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013578XLOC_013578Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024194-exon-sc0000478-1575043694:109266..109696TCONS_00024194-exon-sc0000478-1575043694:109266..109696Clytia hemisphaericaexon
TCONS_00024194-exon-sc0000478-1575043694:108252..108446TCONS_00024194-exon-sc0000478-1575043694:108252..108446Clytia hemisphaericaexon
TCONS_00024194-exon-sc0000478-1575043694:107781..108062TCONS_00024194-exon-sc0000478-1575043694:107781..108062Clytia hemisphaericaexon
TCONS_00024194-exon-sc0000478-1575043694:93821..94811TCONS_00024194-exon-sc0000478-1575043694:93821..94811Clytia hemisphaericaexon
TCONS_00024194-exon-sc0000478-1575043694:93188..93758TCONS_00024194-exon-sc0000478-1575043694:93188..93758Clytia hemisphaericaexon
TCONS_00024194-exon-sc0000478-1510915933:109266..109696TCONS_00024194-exon-sc0000478-1510915933:109266..109696Clytia hemisphaericaexon
TCONS_00024194-exon-sc0000478-1510915933:108252..108446TCONS_00024194-exon-sc0000478-1510915933:108252..108446Clytia hemisphaericaexon
TCONS_00024194-exon-sc0000478-1510915933:107781..108062TCONS_00024194-exon-sc0000478-1510915933:107781..108062Clytia hemisphaericaexon
TCONS_00024194-exon-sc0000478-1510915933:93821..94811TCONS_00024194-exon-sc0000478-1510915933:93821..94811Clytia hemisphaericaexon
TCONS_00024194-exon-sc0000478-1510915933:93188..93758TCONS_00024194-exon-sc0000478-1510915933:93188..93758Clytia hemisphaericaexon
TCONS_00024194-exon-sc0000478-1491911889:109266..109696TCONS_00024194-exon-sc0000478-1491911889:109266..109696Clytia hemisphaericaexon
TCONS_00024194-exon-sc0000478-1491911889:108252..108446TCONS_00024194-exon-sc0000478-1491911889:108252..108446Clytia hemisphaericaexon
TCONS_00024194-exon-sc0000478-1491911889:107781..108062TCONS_00024194-exon-sc0000478-1491911889:107781..108062Clytia hemisphaericaexon
TCONS_00024194-exon-sc0000478-1491911889:93821..94811TCONS_00024194-exon-sc0000478-1491911889:93821..94811Clytia hemisphaericaexon
TCONS_00024194-exon-sc0000478-1491911889:93188..93758TCONS_00024194-exon-sc0000478-1491911889:93188..93758Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000478supercontigsc0000478:93188..109696 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.245378	0	0.63692	0.653561	0.364151	0.841584	0.415316	0	7.77763	9.20404	1.23204	1.52002	21.0096	23.9349	34.7395	22.5045	30.3008	26.1098	1.35958	3.36065	1.23751	9.55137e-05	12.5946	16.6356	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024194 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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