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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024202 ID=TCONS_00024202|Name=TCONS_00024202|organism=Clytia hemisphaerica|type=transcript|length=452bp
GAATTCAAAAAAGGTAAGAATTCGAAAGAAAAGATGTGGTTCAAATTATG
TTGTATTGCTTTGATGGTTGCAATCGCGACAGCCAAGGATGAATTTCGCG
GTGATGATCTGAGAAAACGTGAAAAACGAGCTGTTCGGAATTTTGGTTTG
TGTAACCGTGTCCAGACCTATGGCCCTTCTCCAATCCGCAATTGTATCAA
GGCAAAACGAATGGATTTAGTCAAGGTGAAATGTCAGTTTACATTCAAAT
CACCAATCTCTGGTTCAGTAACAGTTGTTTGTGAACGGAAGCCAAAAGTT
GGTTGGTCTTGCCCTATATCATCAAATGTCGCCATATTGAAGTGCTGTGA
TATATTCTGTGATTTGTGAAATAAAATCATAATTACTTTGAAATAATATC
TCCAAATAATAAAAATTGTCAGTTTAATGTTTTCTCCCCTAAAGCGGTGC
CC Run BLAST on NCBI transcript from alignment at sc0000478:163105..165057- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024202 ID=TCONS_00024202|Name=TCONS_00024202|organism=Clytia hemisphaerica|type=transcript|length=1953bp|location=Sequence derived from alignment at sc0000478:163105..165057- (Clytia hemisphaerica)
GAATTCAAAAAAGGTAAGAATTCGAAAGAAAAGGTAACGGGTCTTGAATA
AATTCAATTTATTCTTTGCAATTTTGAGTTGACAATCTATAGACATGTCA
GTTTTTGTAACCGATACAAGATTTGAAACGTTTATATTGTCAGCCTGTGG
GTTTTCTACAAGTAGTGCCGTATCTATCGGGAGGGTGTAGATTGGGTTTC
GAAAAAGCTTCAAATTTTGTCAATCTTGTTTTCTTGTCGAAAATTCACTT
CTATGCCTCTGAATAGGCGCAAAATTAATATTAATAAAAATCCACGAAGC
CTTAAAAGGTTCTTTATATGTTCTTAATATTTTGATCATCTTAGTCGTAT
GTTCTTATAGAAAAACGTGTATTACATTATACAAACGTTCTATGGCGAAA
ATTTTTATCCTCTACTTTTCAGATGTGGTTCAAATTATGTTGTATTGCTT
TGATGGTTGCAATCGCGACAGCCAAGGTAAACCTTTTGATCAAACTTGAC
AATCCAAATAAACTGAATGCTATAATTTATGTGTGAATTTTAATATCATC
GTTTGGGTCATTTGAGCCGGGTATCTAGCTGCATGAAGGCTAGCTGTTAA
CAAGCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAA
ACCCCCCCCCCCCCCTGAGGAAACCAATATTTGGTGGAAAGATGAAAAAG
TTGGAAAAAGGGCATCGCAGGCCAAAGTTTTACAATTTTTGTAGCAATAC
TTTTAACCTGGTCATTAAGTTTCTCAATAAATGGAAAGGTTCACTTTTAA
ACCGTCTCCGGAACTAAAGAATAAGAAACCCCTATTAGCTCATTAGAAAA
GCTAAGAATCTCTTCCTAGTAAAACAGTAGACTTTCGACTCACTCGATAA
CGAAATAAGTTTAAAAACGGTCAAAATCTAAAAACTGTTTCTCATAAAAA
TCTGCTTTTTATCCTACACAAATTTTGTGATCCACTTGTCTACGCTACTG
CAAATTCAAACTGGGCATAACAGGAGGACTGTATATTATATATTATCAAT
GCCTATCACGTGTCAAAATTTGAAAAGGATTGAATAAATAGTTCAGAAGT
TATCAGTACTTTAAAATGTTTCACAATAAAGTCATAAAACCTGATCTGTA
CTGACCCTAAAATTTTGCACAAGTACTCTTAATAAGATTTTGTTAAAAGT
CAAAAAGTTTCAAGTCGTTTAAAAGCTTTTTCTTCGAGATATACACAAAA
GAATTCCAGCGTGGTAGATCCTCCCCCCCCCGGGCTAATAGGGTTAACAT
CCCATGTCGGATACATCCGTCATCGGCTTTGGATGAGTTAAAACCCACAG
AATTTGATCACAAATTATTAGACCCATTACCTAGAAATACCTTCATTTAA
GTGGCAATCCCCATTTAGGAAAATGGAAAATTCTTGCTTAGGGTTCAGTA
AAATCCAAGGCTACCCTCTAGAAAAGTGAAAATATTTAAATATAAGTCAG
ATTGATGTATTATTTAAATGACATTCCTTAACCTTCAGGATGAATTTCGC
GGTGATGATCTGAGAAAACGTGAAAAACGAGCTGTTCGGAATTTTGGTTT
GTGTAACCGTGTCCAGACCTATGGCCCTTCTCCAATCCGCAATTGTATCA
AGGCAAAACGAATGGATTTAGTCAAGGTGAAATGTCAGTTTACATTCAAA
TCACCAATCTCTGGTTCAGTAACAGTTGTTTGTGAACGGAAGCCAAAAGT
TGGTTGGTCTTGCCCTATATCATCAAATGTCGCCATATTGAAGTGCTGTG
ATATATTCTGTGATTTGTGAAATAAAATCATAATTACTTTGAAATAATAT
CTCCAAATAATAAAAATTGTCAGTTTAATGTTTTCTCCCCTAAAGCGGTG
CCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024202-exon-sc0000478-1575043694:165025..165057 | TCONS_00024202-exon-sc0000478-1575043694:165025..165057 | Clytia hemisphaerica | exon |
| TCONS_00024202-exon-sc0000478-1575043694:164582..164635 | TCONS_00024202-exon-sc0000478-1575043694:164582..164635 | Clytia hemisphaerica | exon |
| TCONS_00024202-exon-sc0000478-1575043694:163105..163469 | TCONS_00024202-exon-sc0000478-1575043694:163105..163469 | Clytia hemisphaerica | exon |
| TCONS_00024202-exon-sc0000478-1510915933:165025..165057 | TCONS_00024202-exon-sc0000478-1510915933:165025..165057 | Clytia hemisphaerica | exon |
| TCONS_00024202-exon-sc0000478-1510915933:164582..164635 | TCONS_00024202-exon-sc0000478-1510915933:164582..164635 | Clytia hemisphaerica | exon |
| TCONS_00024202-exon-sc0000478-1510915933:163105..163469 | TCONS_00024202-exon-sc0000478-1510915933:163105..163469 | Clytia hemisphaerica | exon |
| TCONS_00024202-exon-sc0000478-1491911889:165025..165057 | TCONS_00024202-exon-sc0000478-1491911889:165025..165057 | Clytia hemisphaerica | exon |
| TCONS_00024202-exon-sc0000478-1491911889:164582..164635 | TCONS_00024202-exon-sc0000478-1491911889:164582..164635 | Clytia hemisphaerica | exon |
| TCONS_00024202-exon-sc0000478-1491911889:163105..163469 | TCONS_00024202-exon-sc0000478-1491911889:163105..163469 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000478 | supercontig | sc0000478:163105..165057 - |
Blast
The following BLAST results are available for this feature:
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